data_9HMD # _entry.id 9HMD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9HMD pdb_00009hmd 10.2210/pdb9hmd/pdb WWPDB D_1292143396 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-12-24 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9HMD _pdbx_database_status.recvd_initial_deposition_date 2024-12-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email raphael.gasper@mpi-dortmund.mpg.de _pdbx_contact_author.name_first Raphael _pdbx_contact_author.name_last Gasper _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7780-0773 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, R.' 1 0000-0001-9342-2613 'Waldmann, H.' 2 0000-0002-9606-7247 'Gasper, R.' 3 0000-0002-7780-0773 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of PDE6D in complex with DeltaTag (6a)' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Zhang, R.' _citation_author.ordinal 1 _citation_author.identifier_ORCID 0000-0001-9342-2613 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta ; 18269.879 2 ? ? ? ? 2 non-polymer syn ;4-[3,4-dimethyl-2-(4-methylphenyl)-7-oxidanylidene-pyrazolo[3,4-d]pyridazin-6-yl]-~{N}-[2-(3-ethylphenyl)ethyl]-~{N}-(piperidin-4-ylmethyl)butane-1-sulfonamide ; 618.832 2 ? ? ? ? 3 water nat water 18.015 8 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GMP-PDE delta,Protein p17' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HHHHHHMSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKF RLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; _entity_poly.pdbx_seq_one_letter_code_can ;HHHHHHMSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKF RLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;4-[3,4-dimethyl-2-(4-methylphenyl)-7-oxidanylidene-pyrazolo[3,4-d]pyridazin-6-yl]-~{N}-[2-(3-ethylphenyl)ethyl]-~{N}-(piperidin-4-ylmethyl)butane-1-sulfonamide ; A1IWD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 MET n 1 8 SER n 1 9 ALA n 1 10 LYS n 1 11 ASP n 1 12 GLU n 1 13 ARG n 1 14 ALA n 1 15 ARG n 1 16 GLU n 1 17 ILE n 1 18 LEU n 1 19 ARG n 1 20 GLY n 1 21 PHE n 1 22 LYS n 1 23 LEU n 1 24 ASN n 1 25 TRP n 1 26 MET n 1 27 ASN n 1 28 LEU n 1 29 ARG n 1 30 ASP n 1 31 ALA n 1 32 GLU n 1 33 THR n 1 34 GLY n 1 35 LYS n 1 36 ILE n 1 37 LEU n 1 38 TRP n 1 39 GLN n 1 40 GLY n 1 41 THR n 1 42 GLU n 1 43 ASP n 1 44 LEU n 1 45 SER n 1 46 VAL n 1 47 PRO n 1 48 GLY n 1 49 VAL n 1 50 GLU n 1 51 HIS n 1 52 GLU n 1 53 ALA n 1 54 ARG n 1 55 VAL n 1 56 PRO n 1 57 LYS n 1 58 LYS n 1 59 ILE n 1 60 LEU n 1 61 LYS n 1 62 CYS n 1 63 LYS n 1 64 ALA n 1 65 VAL n 1 66 SER n 1 67 ARG n 1 68 GLU n 1 69 LEU n 1 70 ASN n 1 71 PHE n 1 72 SER n 1 73 SER n 1 74 THR n 1 75 GLU n 1 76 GLN n 1 77 MET n 1 78 GLU n 1 79 LYS n 1 80 PHE n 1 81 ARG n 1 82 LEU n 1 83 GLU n 1 84 GLN n 1 85 LYS n 1 86 VAL n 1 87 TYR n 1 88 PHE n 1 89 LYS n 1 90 GLY n 1 91 GLN n 1 92 CYS n 1 93 LEU n 1 94 GLU n 1 95 GLU n 1 96 TRP n 1 97 PHE n 1 98 PHE n 1 99 GLU n 1 100 PHE n 1 101 GLY n 1 102 PHE n 1 103 VAL n 1 104 ILE n 1 105 PRO n 1 106 ASN n 1 107 SER n 1 108 THR n 1 109 ASN n 1 110 THR n 1 111 TRP n 1 112 GLN n 1 113 SER n 1 114 LEU n 1 115 ILE n 1 116 GLU n 1 117 ALA n 1 118 ALA n 1 119 PRO n 1 120 GLU n 1 121 SER n 1 122 GLN n 1 123 MET n 1 124 MET n 1 125 PRO n 1 126 ALA n 1 127 SER n 1 128 VAL n 1 129 LEU n 1 130 THR n 1 131 GLY n 1 132 ASN n 1 133 VAL n 1 134 ILE n 1 135 ILE n 1 136 GLU n 1 137 THR n 1 138 LYS n 1 139 PHE n 1 140 PHE n 1 141 ASP n 1 142 ASP n 1 143 ASP n 1 144 LEU n 1 145 LEU n 1 146 VAL n 1 147 SER n 1 148 THR n 1 149 SER n 1 150 ARG n 1 151 VAL n 1 152 ARG n 1 153 LEU n 1 154 PHE n 1 155 TYR n 1 156 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 156 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PDE6D, PDED' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1IWD non-polymer . ;4-[3,4-dimethyl-2-(4-methylphenyl)-7-oxidanylidene-pyrazolo[3,4-d]pyridazin-6-yl]-~{N}-[2-(3-ethylphenyl)ethyl]-~{N}-(piperidin-4-ylmethyl)butane-1-sulfonamide ; ? 'C34 H46 N6 O3 S' 618.832 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -5 ? ? ? A . n A 1 2 HIS 2 -4 ? ? ? A . n A 1 3 HIS 3 -3 ? ? ? A . n A 1 4 HIS 4 -2 ? ? ? A . n A 1 5 HIS 5 -1 ? ? ? A . n A 1 6 HIS 6 0 ? ? ? A . n A 1 7 MET 7 1 ? ? ? A . n A 1 8 SER 8 2 2 SER SER A . n A 1 9 ALA 9 3 3 ALA ALA A . n A 1 10 LYS 10 4 4 LYS LYS A . n A 1 11 ASP 11 5 5 ASP ASP A . n A 1 12 GLU 12 6 6 GLU GLU A . n A 1 13 ARG 13 7 7 ARG ARG A . n A 1 14 ALA 14 8 8 ALA ALA A . n A 1 15 ARG 15 9 9 ARG ARG A . n A 1 16 GLU 16 10 10 GLU GLU A . n A 1 17 ILE 17 11 11 ILE ILE A . n A 1 18 LEU 18 12 12 LEU LEU A . n A 1 19 ARG 19 13 13 ARG ARG A . n A 1 20 GLY 20 14 14 GLY GLY A . n A 1 21 PHE 21 15 15 PHE PHE A . n A 1 22 LYS 22 16 16 LYS LYS A . n A 1 23 LEU 23 17 17 LEU LEU A . n A 1 24 ASN 24 18 18 ASN ASN A . n A 1 25 TRP 25 19 19 TRP TRP A . n A 1 26 MET 26 20 20 MET MET A . n A 1 27 ASN 27 21 21 ASN ASN A . n A 1 28 LEU 28 22 22 LEU LEU A . n A 1 29 ARG 29 23 23 ARG ARG A . n A 1 30 ASP 30 24 24 ASP ASP A . n A 1 31 ALA 31 25 25 ALA ALA A . n A 1 32 GLU 32 26 26 GLU GLU A . n A 1 33 THR 33 27 27 THR THR A . n A 1 34 GLY 34 28 28 GLY GLY A . n A 1 35 LYS 35 29 29 LYS LYS A . n A 1 36 ILE 36 30 30 ILE ILE A . n A 1 37 LEU 37 31 31 LEU LEU A . n A 1 38 TRP 38 32 32 TRP TRP A . n A 1 39 GLN 39 33 33 GLN GLN A . n A 1 40 GLY 40 34 34 GLY GLY A . n A 1 41 THR 41 35 35 THR THR A . n A 1 42 GLU 42 36 36 GLU GLU A . n A 1 43 ASP 43 37 37 ASP ASP A . n A 1 44 LEU 44 38 38 LEU LEU A . n A 1 45 SER 45 39 39 SER SER A . n A 1 46 VAL 46 40 40 VAL VAL A . n A 1 47 PRO 47 41 41 PRO PRO A . n A 1 48 GLY 48 42 42 GLY GLY A . n A 1 49 VAL 49 43 43 VAL VAL A . n A 1 50 GLU 50 44 44 GLU GLU A . n A 1 51 HIS 51 45 45 HIS HIS A . n A 1 52 GLU 52 46 46 GLU GLU A . n A 1 53 ALA 53 47 47 ALA ALA A . n A 1 54 ARG 54 48 48 ARG ARG A . n A 1 55 VAL 55 49 49 VAL VAL A . n A 1 56 PRO 56 50 50 PRO PRO A . n A 1 57 LYS 57 51 51 LYS LYS A . n A 1 58 LYS 58 52 52 LYS LYS A . n A 1 59 ILE 59 53 53 ILE ILE A . n A 1 60 LEU 60 54 54 LEU LEU A . n A 1 61 LYS 61 55 55 LYS LYS A . n A 1 62 CYS 62 56 56 CYS CYS A . n A 1 63 LYS 63 57 57 LYS LYS A . n A 1 64 ALA 64 58 58 ALA ALA A . n A 1 65 VAL 65 59 59 VAL VAL A . n A 1 66 SER 66 60 60 SER SER A . n A 1 67 ARG 67 61 61 ARG ARG A . n A 1 68 GLU 68 62 62 GLU GLU A . n A 1 69 LEU 69 63 63 LEU LEU A . n A 1 70 ASN 70 64 64 ASN ASN A . n A 1 71 PHE 71 65 65 PHE PHE A . n A 1 72 SER 72 66 66 SER SER A . n A 1 73 SER 73 67 67 SER SER A . n A 1 74 THR 74 68 68 THR THR A . n A 1 75 GLU 75 69 69 GLU GLU A . n A 1 76 GLN 76 70 70 GLN GLN A . n A 1 77 MET 77 71 71 MET MET A . n A 1 78 GLU 78 72 72 GLU GLU A . n A 1 79 LYS 79 73 73 LYS LYS A . n A 1 80 PHE 80 74 74 PHE PHE A . n A 1 81 ARG 81 75 75 ARG ARG A . n A 1 82 LEU 82 76 76 LEU LEU A . n A 1 83 GLU 83 77 77 GLU GLU A . n A 1 84 GLN 84 78 78 GLN GLN A . n A 1 85 LYS 85 79 79 LYS LYS A . n A 1 86 VAL 86 80 80 VAL VAL A . n A 1 87 TYR 87 81 81 TYR TYR A . n A 1 88 PHE 88 82 82 PHE PHE A . n A 1 89 LYS 89 83 83 LYS LYS A . n A 1 90 GLY 90 84 84 GLY GLY A . n A 1 91 GLN 91 85 85 GLN GLN A . n A 1 92 CYS 92 86 86 CYS CYS A . n A 1 93 LEU 93 87 87 LEU LEU A . n A 1 94 GLU 94 88 88 GLU GLU A . n A 1 95 GLU 95 89 89 GLU GLU A . n A 1 96 TRP 96 90 90 TRP TRP A . n A 1 97 PHE 97 91 91 PHE PHE A . n A 1 98 PHE 98 92 92 PHE PHE A . n A 1 99 GLU 99 93 93 GLU GLU A . n A 1 100 PHE 100 94 94 PHE PHE A . n A 1 101 GLY 101 95 95 GLY GLY A . n A 1 102 PHE 102 96 96 PHE PHE A . n A 1 103 VAL 103 97 97 VAL VAL A . n A 1 104 ILE 104 98 98 ILE ILE A . n A 1 105 PRO 105 99 99 PRO PRO A . n A 1 106 ASN 106 100 100 ASN ASN A . n A 1 107 SER 107 101 101 SER SER A . n A 1 108 THR 108 102 102 THR THR A . n A 1 109 ASN 109 103 103 ASN ASN A . n A 1 110 THR 110 104 104 THR THR A . n A 1 111 TRP 111 105 105 TRP TRP A . n A 1 112 GLN 112 106 106 GLN GLN A . n A 1 113 SER 113 107 107 SER SER A . n A 1 114 LEU 114 108 108 LEU LEU A . n A 1 115 ILE 115 109 109 ILE ILE A . n A 1 116 GLU 116 110 110 GLU GLU A . n A 1 117 ALA 117 111 ? ? ? A . n A 1 118 ALA 118 112 ? ? ? A . n A 1 119 PRO 119 113 ? ? ? A . n A 1 120 GLU 120 114 ? ? ? A . n A 1 121 SER 121 115 ? ? ? A . n A 1 122 GLN 122 116 ? ? ? A . n A 1 123 MET 123 117 117 MET MET A . n A 1 124 MET 124 118 118 MET MET A . n A 1 125 PRO 125 119 119 PRO PRO A . n A 1 126 ALA 126 120 120 ALA ALA A . n A 1 127 SER 127 121 121 SER SER A . n A 1 128 VAL 128 122 122 VAL VAL A . n A 1 129 LEU 129 123 123 LEU LEU A . n A 1 130 THR 130 124 124 THR THR A . n A 1 131 GLY 131 125 125 GLY GLY A . n A 1 132 ASN 132 126 126 ASN ASN A . n A 1 133 VAL 133 127 127 VAL VAL A . n A 1 134 ILE 134 128 128 ILE ILE A . n A 1 135 ILE 135 129 129 ILE ILE A . n A 1 136 GLU 136 130 130 GLU GLU A . n A 1 137 THR 137 131 131 THR THR A . n A 1 138 LYS 138 132 132 LYS LYS A . n A 1 139 PHE 139 133 133 PHE PHE A . n A 1 140 PHE 140 134 134 PHE PHE A . n A 1 141 ASP 141 135 135 ASP ASP A . n A 1 142 ASP 142 136 136 ASP ASP A . n A 1 143 ASP 143 137 137 ASP ASP A . n A 1 144 LEU 144 138 138 LEU LEU A . n A 1 145 LEU 145 139 139 LEU LEU A . n A 1 146 VAL 146 140 140 VAL VAL A . n A 1 147 SER 147 141 141 SER SER A . n A 1 148 THR 148 142 142 THR THR A . n A 1 149 SER 149 143 143 SER SER A . n A 1 150 ARG 150 144 144 ARG ARG A . n A 1 151 VAL 151 145 145 VAL VAL A . n A 1 152 ARG 152 146 146 ARG ARG A . n A 1 153 LEU 153 147 147 LEU LEU A . n A 1 154 PHE 154 148 148 PHE PHE A . n A 1 155 TYR 155 149 149 TYR TYR A . n A 1 156 VAL 156 150 150 VAL VAL A . n B 1 1 HIS 1 -5 ? ? ? B . n B 1 2 HIS 2 -4 ? ? ? B . n B 1 3 HIS 3 -3 ? ? ? B . n B 1 4 HIS 4 -2 ? ? ? B . n B 1 5 HIS 5 -1 ? ? ? B . n B 1 6 HIS 6 0 ? ? ? B . n B 1 7 MET 7 1 ? ? ? B . n B 1 8 SER 8 2 2 SER SER B . n B 1 9 ALA 9 3 3 ALA ALA B . n B 1 10 LYS 10 4 4 LYS LYS B . n B 1 11 ASP 11 5 5 ASP ASP B . n B 1 12 GLU 12 6 6 GLU GLU B . n B 1 13 ARG 13 7 7 ARG ARG B . n B 1 14 ALA 14 8 8 ALA ALA B . n B 1 15 ARG 15 9 9 ARG ARG B . n B 1 16 GLU 16 10 10 GLU GLU B . n B 1 17 ILE 17 11 11 ILE ILE B . n B 1 18 LEU 18 12 12 LEU LEU B . n B 1 19 ARG 19 13 13 ARG ARG B . n B 1 20 GLY 20 14 14 GLY GLY B . n B 1 21 PHE 21 15 15 PHE PHE B . n B 1 22 LYS 22 16 16 LYS LYS B . n B 1 23 LEU 23 17 17 LEU LEU B . n B 1 24 ASN 24 18 18 ASN ASN B . n B 1 25 TRP 25 19 19 TRP TRP B . n B 1 26 MET 26 20 20 MET MET B . n B 1 27 ASN 27 21 21 ASN ASN B . n B 1 28 LEU 28 22 22 LEU LEU B . n B 1 29 ARG 29 23 23 ARG ARG B . n B 1 30 ASP 30 24 24 ASP ASP B . n B 1 31 ALA 31 25 25 ALA ALA B . n B 1 32 GLU 32 26 26 GLU GLU B . n B 1 33 THR 33 27 27 THR THR B . n B 1 34 GLY 34 28 28 GLY GLY B . n B 1 35 LYS 35 29 29 LYS LYS B . n B 1 36 ILE 36 30 30 ILE ILE B . n B 1 37 LEU 37 31 31 LEU LEU B . n B 1 38 TRP 38 32 32 TRP TRP B . n B 1 39 GLN 39 33 33 GLN GLN B . n B 1 40 GLY 40 34 34 GLY GLY B . n B 1 41 THR 41 35 35 THR THR B . n B 1 42 GLU 42 36 36 GLU GLU B . n B 1 43 ASP 43 37 37 ASP ASP B . n B 1 44 LEU 44 38 38 LEU LEU B . n B 1 45 SER 45 39 39 SER SER B . n B 1 46 VAL 46 40 40 VAL VAL B . n B 1 47 PRO 47 41 41 PRO PRO B . n B 1 48 GLY 48 42 42 GLY GLY B . n B 1 49 VAL 49 43 43 VAL VAL B . n B 1 50 GLU 50 44 44 GLU GLU B . n B 1 51 HIS 51 45 45 HIS HIS B . n B 1 52 GLU 52 46 46 GLU GLU B . n B 1 53 ALA 53 47 47 ALA ALA B . n B 1 54 ARG 54 48 48 ARG ARG B . n B 1 55 VAL 55 49 49 VAL VAL B . n B 1 56 PRO 56 50 50 PRO PRO B . n B 1 57 LYS 57 51 51 LYS LYS B . n B 1 58 LYS 58 52 52 LYS LYS B . n B 1 59 ILE 59 53 53 ILE ILE B . n B 1 60 LEU 60 54 54 LEU LEU B . n B 1 61 LYS 61 55 55 LYS LYS B . n B 1 62 CYS 62 56 56 CYS CYS B . n B 1 63 LYS 63 57 57 LYS LYS B . n B 1 64 ALA 64 58 58 ALA ALA B . n B 1 65 VAL 65 59 59 VAL VAL B . n B 1 66 SER 66 60 60 SER SER B . n B 1 67 ARG 67 61 61 ARG ARG B . n B 1 68 GLU 68 62 62 GLU GLU B . n B 1 69 LEU 69 63 63 LEU LEU B . n B 1 70 ASN 70 64 64 ASN ASN B . n B 1 71 PHE 71 65 65 PHE PHE B . n B 1 72 SER 72 66 66 SER SER B . n B 1 73 SER 73 67 67 SER SER B . n B 1 74 THR 74 68 68 THR THR B . n B 1 75 GLU 75 69 69 GLU GLU B . n B 1 76 GLN 76 70 70 GLN GLN B . n B 1 77 MET 77 71 71 MET MET B . n B 1 78 GLU 78 72 72 GLU GLU B . n B 1 79 LYS 79 73 73 LYS LYS B . n B 1 80 PHE 80 74 74 PHE PHE B . n B 1 81 ARG 81 75 75 ARG ARG B . n B 1 82 LEU 82 76 76 LEU LEU B . n B 1 83 GLU 83 77 77 GLU GLU B . n B 1 84 GLN 84 78 78 GLN GLN B . n B 1 85 LYS 85 79 79 LYS LYS B . n B 1 86 VAL 86 80 80 VAL VAL B . n B 1 87 TYR 87 81 81 TYR TYR B . n B 1 88 PHE 88 82 82 PHE PHE B . n B 1 89 LYS 89 83 83 LYS LYS B . n B 1 90 GLY 90 84 84 GLY GLY B . n B 1 91 GLN 91 85 85 GLN GLN B . n B 1 92 CYS 92 86 86 CYS CYS B . n B 1 93 LEU 93 87 87 LEU LEU B . n B 1 94 GLU 94 88 88 GLU GLU B . n B 1 95 GLU 95 89 89 GLU GLU B . n B 1 96 TRP 96 90 90 TRP TRP B . n B 1 97 PHE 97 91 91 PHE PHE B . n B 1 98 PHE 98 92 92 PHE PHE B . n B 1 99 GLU 99 93 93 GLU GLU B . n B 1 100 PHE 100 94 94 PHE PHE B . n B 1 101 GLY 101 95 95 GLY GLY B . n B 1 102 PHE 102 96 96 PHE PHE B . n B 1 103 VAL 103 97 97 VAL VAL B . n B 1 104 ILE 104 98 98 ILE ILE B . n B 1 105 PRO 105 99 99 PRO PRO B . n B 1 106 ASN 106 100 100 ASN ASN B . n B 1 107 SER 107 101 101 SER SER B . n B 1 108 THR 108 102 102 THR THR B . n B 1 109 ASN 109 103 103 ASN ASN B . n B 1 110 THR 110 104 104 THR THR B . n B 1 111 TRP 111 105 105 TRP TRP B . n B 1 112 GLN 112 106 106 GLN GLN B . n B 1 113 SER 113 107 107 SER SER B . n B 1 114 LEU 114 108 108 LEU LEU B . n B 1 115 ILE 115 109 109 ILE ILE B . n B 1 116 GLU 116 110 110 GLU GLU B . n B 1 117 ALA 117 111 111 ALA ALA B . n B 1 118 ALA 118 112 112 ALA ALA B . n B 1 119 PRO 119 113 113 PRO PRO B . n B 1 120 GLU 120 114 114 GLU GLU B . n B 1 121 SER 121 115 115 SER SER B . n B 1 122 GLN 122 116 116 GLN GLN B . n B 1 123 MET 123 117 117 MET MET B . n B 1 124 MET 124 118 118 MET MET B . n B 1 125 PRO 125 119 119 PRO PRO B . n B 1 126 ALA 126 120 120 ALA ALA B . n B 1 127 SER 127 121 121 SER SER B . n B 1 128 VAL 128 122 122 VAL VAL B . n B 1 129 LEU 129 123 123 LEU LEU B . n B 1 130 THR 130 124 124 THR THR B . n B 1 131 GLY 131 125 125 GLY GLY B . n B 1 132 ASN 132 126 126 ASN ASN B . n B 1 133 VAL 133 127 127 VAL VAL B . n B 1 134 ILE 134 128 128 ILE ILE B . n B 1 135 ILE 135 129 129 ILE ILE B . n B 1 136 GLU 136 130 130 GLU GLU B . n B 1 137 THR 137 131 131 THR THR B . n B 1 138 LYS 138 132 132 LYS LYS B . n B 1 139 PHE 139 133 133 PHE PHE B . n B 1 140 PHE 140 134 134 PHE PHE B . n B 1 141 ASP 141 135 135 ASP ASP B . n B 1 142 ASP 142 136 136 ASP ASP B . n B 1 143 ASP 143 137 137 ASP ASP B . n B 1 144 LEU 144 138 138 LEU LEU B . n B 1 145 LEU 145 139 139 LEU LEU B . n B 1 146 VAL 146 140 140 VAL VAL B . n B 1 147 SER 147 141 141 SER SER B . n B 1 148 THR 148 142 142 THR THR B . n B 1 149 SER 149 143 143 SER SER B . n B 1 150 ARG 150 144 144 ARG ARG B . n B 1 151 VAL 151 145 145 VAL VAL B . n B 1 152 ARG 152 146 146 ARG ARG B . n B 1 153 LEU 153 147 147 LEU LEU B . n B 1 154 PHE 154 148 148 PHE PHE B . n B 1 155 TYR 155 149 149 TYR TYR B . n B 1 156 VAL 156 150 150 VAL VAL B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1IWD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1IWD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1IWD 1 201 201 A1IWD Z95 A . D 2 A1IWD 1 201 201 A1IWD Z95 B . E 3 HOH 1 301 4 HOH HOH A . E 3 HOH 2 302 8 HOH HOH A . E 3 HOH 3 303 7 HOH HOH A . E 3 HOH 4 304 5 HOH HOH A . F 3 HOH 1 301 6 HOH HOH B . F 3 HOH 2 302 2 HOH HOH B . F 3 HOH 3 303 1 HOH HOH B . F 3 HOH 4 304 3 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 6 ? CG ? A GLU 12 CG 2 1 Y 1 A GLU 6 ? CD ? A GLU 12 CD 3 1 Y 1 A GLU 6 ? OE1 ? A GLU 12 OE1 4 1 Y 1 A GLU 6 ? OE2 ? A GLU 12 OE2 5 1 Y 1 B GLU 6 ? CG ? B GLU 12 CG 6 1 Y 1 B GLU 6 ? CD ? B GLU 12 CD 7 1 Y 1 B GLU 6 ? OE1 ? B GLU 12 OE1 8 1 Y 1 B GLU 6 ? OE2 ? B GLU 12 OE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.21.2_5419)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9HMD _cell.details ? _cell.formula_units_Z ? _cell.length_a 56.470 _cell.length_a_esd ? _cell.length_b 75.220 _cell.length_b_esd ? _cell.length_c 81.600 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9HMD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9HMD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '4 M Na-formate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'Bruker PHOTON III' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-10-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54184 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'BRUKER X8 PROTEUM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54184 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9HMD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 19.98 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12453 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.20 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.445 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.966 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.412 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.50 2.57 ? ? ? ? ? ? 914 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? ? 1 1 0.362 ? ? ? ? 2.046 ? ? ? ? ? ? ? ? ? 2.57 2.64 ? ? ? ? ? ? 870 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? ? 2 1 0.367 ? ? ? ? 1.829 ? ? ? ? ? ? ? ? ? 2.64 2.71 ? ? ? ? ? ? 859 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? ? 3 1 0.521 ? ? ? ? 1.483 ? ? ? ? ? ? ? ? ? 2.71 2.8 ? ? ? ? ? ? 821 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? ? 4 1 0.574 ? ? ? ? 1.31 ? ? ? ? ? ? ? ? ? 2.80 2.89 ? ? ? ? ? ? 818 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1.099 ? ? 5 1 0.71 ? ? ? ? 1.018 ? ? ? ? ? ? ? ? ? 2.89 2.99 ? ? ? ? ? ? 797 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.92 ? ? 6 1 0.755 ? ? ? ? 0.852 ? ? ? ? ? ? ? ? ? 2.99 3.1 ? ? ? ? ? ? 759 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.889 ? ? 7 1 0.829 ? ? ? ? 0.824 ? ? ? ? ? ? ? ? ? 3.10 3.23 ? ? ? ? ? ? 724 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.617 ? ? 8 1 0.888 ? ? ? ? 0.571 ? ? ? ? ? ? ? ? ? 3.23 3.37 ? ? ? ? ? ? 718 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.511 ? ? 9 1 0.924 ? ? ? ? 0.474 ? ? ? ? ? ? ? ? ? 3.37 3.54 ? ? ? ? ? ? 670 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.358 ? ? 10 1 0.955 ? ? ? ? 0.331 ? ? ? ? ? ? ? ? ? 3.54 3.73 ? ? ? ? ? ? 631 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.302 ? ? 11 1 0.964 ? ? ? ? 0.279 ? ? ? ? ? ? ? ? ? 3.73 3.95 ? ? ? ? ? ? 621 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.262 ? ? 12 1 0.98 ? ? ? ? 0.243 ? ? ? ? ? ? ? ? ? 3.95 4.23 ? ? ? ? ? ? 572 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.211 ? ? 13 1 0.986 ? ? ? ? 0.195 ? ? ? ? ? ? ? ? ? 4.23 4.56 ? ? ? ? ? ? 540 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.17 ? ? 14 1 0.99 ? ? ? ? 0.158 ? ? ? ? ? ? ? ? ? 4.56 5.0 ? ? ? ? ? ? 514 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.15 ? ? 15 1 0.992 ? ? ? ? 0.139 ? ? ? ? ? ? ? ? ? 5.00 5.59 ? ? ? ? ? ? 452 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.184 ? ? 16 1 0.987 ? ? ? ? 0.17 ? ? ? ? ? ? ? ? ? 5.59 6.46 ? ? ? ? ? ? 401 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.314 ? ? 17 1 0.966 ? ? ? ? 0.29 ? ? ? ? ? ? ? ? ? 6.46 7.91 ? ? ? ? ? ? 355 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.217 ? ? 18 1 0.985 ? ? ? ? 0.2 ? ? ? ? ? ? ? ? ? 7.91 11.18 ? ? ? ? ? ? 282 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.121 ? ? 19 1 0.994 ? ? ? ? 0.111 ? ? ? ? ? ? ? ? ? 11.18 19.98 ? ? ? ? ? ? 135 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.081 ? ? 20 1 0.997 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9HMD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.50 _refine.ls_d_res_low 19.98 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12451 _refine.ls_number_reflns_R_free 623 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.54 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2418 _refine.ls_R_factor_R_free 0.2829 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2396 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.02 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.37 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 19.98 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 2483 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2475 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2542 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.599 ? 3432 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.009 ? 1000 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.055 ? 365 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 426 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.50 2.75 . . 151 2874 99.00 . . . . 0.3198 . . . . . . . . . . . 0.3935 'X-RAY DIFFRACTION' 2.75 3.15 . . 155 2940 100.00 . . . . 0.2844 . . . . . . . . . . . 0.3112 'X-RAY DIFFRACTION' 3.15 3.96 . . 155 2939 100.00 . . . . 0.2244 . . . . . . . . . . . 0.2847 'X-RAY DIFFRACTION' 3.96 19.98 . . 162 3075 100.00 . . . . 0.2008 . . . . . . . . . . . 0.2317 # _struct.entry_id 9HMD _struct.title 'Crystal structure of PDE6D in complex with DeltaTag (6a)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9HMD _struct_keywords.text 'PDE6D, bromoalkane warheads, glutamic acid labelling, targetted covalent inhibitor, LIPID BINDING PROTEIN' _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDE6D_HUMAN _struct_ref.pdbx_db_accession O43924 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVSRELNFSSTEQMEKFRLEQKV YFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPASVLTGNVIIETKFFDDDLLVSTSRVRLFYV ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9HMD A 7 ? 156 ? O43924 1 ? 150 ? 1 150 2 1 9HMD B 7 ? 156 ? O43924 1 ? 150 ? 1 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9HMD HIS A 1 ? UNP O43924 ? ? 'expression tag' -5 1 1 9HMD HIS A 2 ? UNP O43924 ? ? 'expression tag' -4 2 1 9HMD HIS A 3 ? UNP O43924 ? ? 'expression tag' -3 3 1 9HMD HIS A 4 ? UNP O43924 ? ? 'expression tag' -2 4 1 9HMD HIS A 5 ? UNP O43924 ? ? 'expression tag' -1 5 1 9HMD HIS A 6 ? UNP O43924 ? ? 'expression tag' 0 6 2 9HMD HIS B 1 ? UNP O43924 ? ? 'expression tag' -5 7 2 9HMD HIS B 2 ? UNP O43924 ? ? 'expression tag' -4 8 2 9HMD HIS B 3 ? UNP O43924 ? ? 'expression tag' -3 9 2 9HMD HIS B 4 ? UNP O43924 ? ? 'expression tag' -2 10 2 9HMD HIS B 5 ? UNP O43924 ? ? 'expression tag' -1 11 2 9HMD HIS B 6 ? UNP O43924 ? ? 'expression tag' 0 12 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 8 ? GLY A 20 ? SER A 2 GLY A 14 1 ? 13 HELX_P HELX_P2 AA2 LYS A 58 ? CYS A 62 ? LYS A 52 CYS A 56 5 ? 5 HELX_P HELX_P3 AA3 PRO A 125 ? THR A 130 ? PRO A 119 THR A 124 1 ? 6 HELX_P HELX_P4 AA4 ALA B 9 ? GLY B 20 ? ALA B 3 GLY B 14 1 ? 12 HELX_P HELX_P5 AA5 LYS B 58 ? CYS B 62 ? LYS B 52 CYS B 56 5 ? 5 HELX_P HELX_P6 AA6 PRO B 125 ? THR B 130 ? PRO B 119 THR B 124 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 4 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 36 ? GLY A 40 ? ILE A 30 GLY A 34 AA1 2 PHE A 21 ? ASP A 30 ? PHE A 15 ASP A 24 AA1 3 VAL A 65 ? SER A 73 ? VAL A 59 SER A 67 AA1 4 SER A 107 ? ILE A 115 ? SER A 101 ILE A 109 AA2 1 GLU A 50 ? PRO A 56 ? GLU A 44 PRO A 50 AA2 2 LEU A 144 ? VAL A 156 ? LEU A 138 VAL A 150 AA2 3 VAL A 133 ? ASP A 141 ? VAL A 127 ASP A 135 AA2 4 MET A 77 ? PHE A 88 ? MET A 71 PHE A 82 AA2 5 GLN A 91 ? VAL A 103 ? GLN A 85 VAL A 97 AA3 1 ILE B 36 ? GLY B 40 ? ILE B 30 GLY B 34 AA3 2 PHE B 21 ? ASP B 30 ? PHE B 15 ASP B 24 AA3 3 ALA B 64 ? SER B 73 ? ALA B 58 SER B 67 AA3 4 SER B 107 ? GLU B 116 ? SER B 101 GLU B 110 AA4 1 GLU B 50 ? PRO B 56 ? GLU B 44 PRO B 50 AA4 2 LEU B 144 ? VAL B 156 ? LEU B 138 VAL B 150 AA4 3 VAL B 133 ? ASP B 141 ? VAL B 127 ASP B 135 AA4 4 MET B 77 ? PHE B 88 ? MET B 71 PHE B 82 AA4 5 GLN B 91 ? VAL B 103 ? GLN B 85 VAL B 97 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 37 ? O LEU A 31 N LEU A 28 ? N LEU A 22 AA1 2 3 N ASN A 27 ? N ASN A 21 O GLU A 68 ? O GLU A 62 AA1 3 4 N LEU A 69 ? N LEU A 63 O TRP A 111 ? O TRP A 105 AA2 1 2 N HIS A 51 ? N HIS A 45 O ARG A 152 ? O ARG A 146 AA2 2 3 O VAL A 146 ? O VAL A 140 N PHE A 139 ? N PHE A 133 AA2 3 4 O ILE A 134 ? O ILE A 128 N TYR A 87 ? N TYR A 81 AA2 4 5 N LEU A 82 ? N LEU A 76 O PHE A 98 ? O PHE A 92 AA3 1 2 O LEU B 37 ? O LEU B 31 N LEU B 28 ? N LEU B 22 AA3 2 3 N ARG B 29 ? N ARG B 23 O SER B 66 ? O SER B 60 AA3 3 4 N LEU B 69 ? N LEU B 63 O TRP B 111 ? O TRP B 105 AA4 1 2 N HIS B 51 ? N HIS B 45 O ARG B 152 ? O ARG B 146 AA4 2 3 O VAL B 146 ? O VAL B 140 N PHE B 139 ? N PHE B 133 AA4 3 4 O ILE B 134 ? O ILE B 128 N TYR B 87 ? N TYR B 81 AA4 4 5 N PHE B 80 ? N PHE B 74 O PHE B 100 ? O PHE B 94 # _pdbx_entry_details.entry_id 9HMD _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 B GLU 88 ? ? C20 B A1IWD 201 ? ? 1.49 2 1 OE1 A GLU 88 ? ? C20 A A1IWD 201 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 136 ? ? 61.88 -114.29 2 1 ASP B 136 ? ? 61.39 -107.76 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 5.7746 _pdbx_refine_tls.origin_y 17.9032 _pdbx_refine_tls.origin_z -15.3540 _pdbx_refine_tls.T[1][1] 0.1378 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0252 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0073 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.1085 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0082 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.1744 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.5116 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.1486 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.0401 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.1420 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.2909 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.1255 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0278 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0112 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0459 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0489 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0285 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0479 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0055 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0072 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0450 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS -5 ? A HIS 1 2 1 Y 1 A HIS -4 ? A HIS 2 3 1 Y 1 A HIS -3 ? A HIS 3 4 1 Y 1 A HIS -2 ? A HIS 4 5 1 Y 1 A HIS -1 ? A HIS 5 6 1 Y 1 A HIS 0 ? A HIS 6 7 1 Y 1 A MET 1 ? A MET 7 8 1 Y 1 A ALA 111 ? A ALA 117 9 1 Y 1 A ALA 112 ? A ALA 118 10 1 Y 1 A PRO 113 ? A PRO 119 11 1 Y 1 A GLU 114 ? A GLU 120 12 1 Y 1 A SER 115 ? A SER 121 13 1 Y 1 A GLN 116 ? A GLN 122 14 1 Y 1 B HIS -5 ? B HIS 1 15 1 Y 1 B HIS -4 ? B HIS 2 16 1 Y 1 B HIS -3 ? B HIS 3 17 1 Y 1 B HIS -2 ? B HIS 4 18 1 Y 1 B HIS -1 ? B HIS 5 19 1 Y 1 B HIS 0 ? B HIS 6 20 1 Y 1 B MET 1 ? B MET 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1IWD C1 C N N 1 A1IWD C2 C Y N 2 A1IWD C3 C Y N 3 A1IWD C4 C Y N 4 A1IWD C5 C Y N 5 A1IWD C6 C Y N 6 A1IWD C7 C N N 7 A1IWD C10 C N N 8 A1IWD C11 C N N 9 A1IWD C12 C N N 10 A1IWD C13 C N N 11 A1IWD C14 C Y N 12 A1IWD C15 C Y N 13 A1IWD C16 C Y N 14 A1IWD C17 C Y N 15 A1IWD C18 C Y N 16 A1IWD C19 C N N 17 A1IWD C20 C N N 18 A1IWD C21 C Y N 19 A1IWD C22 C N N 20 A1IWD C23 C N N 21 A1IWD C24 C N N 22 A1IWD C25 C N N 23 A1IWD C26 C N N 24 A1IWD C27 C N N 25 A1IWD C28 C N N 26 A1IWD C29 C N N 27 A1IWD C30 C Y N 28 A1IWD C31 C Y N 29 A1IWD C32 C N N 30 A1IWD C33 C Y N 31 A1IWD C34 C Y N 32 A1IWD C8 C N N 33 A1IWD C9 C N N 34 A1IWD N1 N Y N 35 A1IWD N2 N Y N 36 A1IWD N3 N N N 37 A1IWD N4 N N N 38 A1IWD N5 N N N 39 A1IWD N6 N N N 40 A1IWD O1 O N N 41 A1IWD O2 O N N 42 A1IWD O3 O N N 43 A1IWD S1 S N N 44 A1IWD H3 H N N 45 A1IWD H1 H N N 46 A1IWD H2 H N N 47 A1IWD H4 H N N 48 A1IWD H5 H N N 49 A1IWD H10 H N N 50 A1IWD H11 H N N 51 A1IWD H12 H N N 52 A1IWD H13 H N N 53 A1IWD H14 H N N 54 A1IWD H15 H N N 55 A1IWD H16 H N N 56 A1IWD H17 H N N 57 A1IWD H18 H N N 58 A1IWD H19 H N N 59 A1IWD H20 H N N 60 A1IWD H21 H N N 61 A1IWD H22 H N N 62 A1IWD H46 H N N 63 A1IWD H24 H N N 64 A1IWD H23 H N N 65 A1IWD H25 H N N 66 A1IWD H26 H N N 67 A1IWD H27 H N N 68 A1IWD H28 H N N 69 A1IWD H30 H N N 70 A1IWD H29 H N N 71 A1IWD H31 H N N 72 A1IWD H32 H N N 73 A1IWD H35 H N N 74 A1IWD H34 H N N 75 A1IWD H36 H N N 76 A1IWD H37 H N N 77 A1IWD H38 H N N 78 A1IWD H39 H N N 79 A1IWD H40 H N N 80 A1IWD H42 H N N 81 A1IWD H43 H N N 82 A1IWD H41 H N N 83 A1IWD H44 H N N 84 A1IWD H45 H N N 85 A1IWD H6 H N N 86 A1IWD H7 H N N 87 A1IWD H8 H N N 88 A1IWD H9 H N N 89 A1IWD H33 H N N 90 ALA N N N N 91 ALA CA C N S 92 ALA C C N N 93 ALA O O N N 94 ALA CB C N N 95 ALA OXT O N N 96 ALA H H N N 97 ALA H2 H N N 98 ALA HA H N N 99 ALA HB1 H N N 100 ALA HB2 H N N 101 ALA HB3 H N N 102 ALA HXT H N N 103 ARG N N N N 104 ARG CA C N S 105 ARG C C N N 106 ARG O O N N 107 ARG CB C N N 108 ARG CG C N N 109 ARG CD C N N 110 ARG NE N N N 111 ARG CZ C N N 112 ARG NH1 N N N 113 ARG NH2 N N N 114 ARG OXT O N N 115 ARG H H N N 116 ARG H2 H N N 117 ARG HA H N N 118 ARG HB2 H N N 119 ARG HB3 H N N 120 ARG HG2 H N N 121 ARG HG3 H N N 122 ARG HD2 H N N 123 ARG HD3 H N N 124 ARG HE H N N 125 ARG HH11 H N N 126 ARG HH12 H N N 127 ARG HH21 H N N 128 ARG HH22 H N N 129 ARG HXT H N N 130 ASN N N N N 131 ASN CA C N S 132 ASN C C N N 133 ASN O O N N 134 ASN CB C N N 135 ASN CG C N N 136 ASN OD1 O N N 137 ASN ND2 N N N 138 ASN OXT O N N 139 ASN H H N N 140 ASN H2 H N N 141 ASN HA H N N 142 ASN HB2 H N N 143 ASN HB3 H N N 144 ASN HD21 H N N 145 ASN HD22 H N N 146 ASN HXT H N N 147 ASP N N N N 148 ASP CA C N S 149 ASP C C N N 150 ASP O O N N 151 ASP CB C N N 152 ASP CG C N N 153 ASP OD1 O N N 154 ASP OD2 O N N 155 ASP OXT O N N 156 ASP H H N N 157 ASP H2 H N N 158 ASP HA H N N 159 ASP HB2 H N N 160 ASP HB3 H N N 161 ASP HD2 H N N 162 ASP HXT H N N 163 CYS N N N N 164 CYS CA C N R 165 CYS C C N N 166 CYS O O N N 167 CYS CB C N N 168 CYS SG S N N 169 CYS OXT O N N 170 CYS H H N N 171 CYS H2 H N N 172 CYS HA H N N 173 CYS HB2 H N N 174 CYS HB3 H N N 175 CYS HG H N N 176 CYS HXT H N N 177 GLN N N N N 178 GLN CA C N S 179 GLN C C N N 180 GLN O O N N 181 GLN CB C N N 182 GLN CG C N N 183 GLN CD C N N 184 GLN OE1 O N N 185 GLN NE2 N N N 186 GLN OXT O N N 187 GLN H H N N 188 GLN H2 H N N 189 GLN HA H N N 190 GLN HB2 H N N 191 GLN HB3 H N N 192 GLN HG2 H N N 193 GLN HG3 H N N 194 GLN HE21 H N N 195 GLN HE22 H N N 196 GLN HXT H N N 197 GLU N N N N 198 GLU CA C N S 199 GLU C C N N 200 GLU O O N N 201 GLU CB C N N 202 GLU CG C N N 203 GLU CD C N N 204 GLU OE1 O N N 205 GLU OE2 O N N 206 GLU OXT O N N 207 GLU H H N N 208 GLU H2 H N N 209 GLU HA H N N 210 GLU HB2 H N N 211 GLU HB3 H N N 212 GLU HG2 H N N 213 GLU HG3 H N N 214 GLU HE2 H N N 215 GLU HXT H N N 216 GLY N N N N 217 GLY CA C N N 218 GLY C C N N 219 GLY O O N N 220 GLY OXT O N N 221 GLY H H N N 222 GLY H2 H N N 223 GLY HA2 H N N 224 GLY HA3 H N N 225 GLY HXT H N N 226 HIS N N N N 227 HIS CA C N S 228 HIS C C N N 229 HIS O O N N 230 HIS CB C N N 231 HIS CG C Y N 232 HIS ND1 N Y N 233 HIS CD2 C Y N 234 HIS CE1 C Y N 235 HIS NE2 N Y N 236 HIS OXT O N N 237 HIS H H N N 238 HIS H2 H N N 239 HIS HA H N N 240 HIS HB2 H N N 241 HIS HB3 H N N 242 HIS HD1 H N N 243 HIS HD2 H N N 244 HIS HE1 H N N 245 HIS HE2 H N N 246 HIS HXT H N N 247 HOH O O N N 248 HOH H1 H N N 249 HOH H2 H N N 250 ILE N N N N 251 ILE CA C N S 252 ILE C C N N 253 ILE O O N N 254 ILE CB C N S 255 ILE CG1 C N N 256 ILE CG2 C N N 257 ILE CD1 C N N 258 ILE OXT O N N 259 ILE H H N N 260 ILE H2 H N N 261 ILE HA H N N 262 ILE HB H N N 263 ILE HG12 H N N 264 ILE HG13 H N N 265 ILE HG21 H N N 266 ILE HG22 H N N 267 ILE HG23 H N N 268 ILE HD11 H N N 269 ILE HD12 H N N 270 ILE HD13 H N N 271 ILE HXT H N N 272 LEU N N N N 273 LEU CA C N S 274 LEU C C N N 275 LEU O O N N 276 LEU CB C N N 277 LEU CG C N N 278 LEU CD1 C N N 279 LEU CD2 C N N 280 LEU OXT O N N 281 LEU H H N N 282 LEU H2 H N N 283 LEU HA H N N 284 LEU HB2 H N N 285 LEU HB3 H N N 286 LEU HG H N N 287 LEU HD11 H N N 288 LEU HD12 H N N 289 LEU HD13 H N N 290 LEU HD21 H N N 291 LEU HD22 H N N 292 LEU HD23 H N N 293 LEU HXT H N N 294 LYS N N N N 295 LYS CA C N S 296 LYS C C N N 297 LYS O O N N 298 LYS CB C N N 299 LYS CG C N N 300 LYS CD C N N 301 LYS CE C N N 302 LYS NZ N N N 303 LYS OXT O N N 304 LYS H H N N 305 LYS H2 H N N 306 LYS HA H N N 307 LYS HB2 H N N 308 LYS HB3 H N N 309 LYS HG2 H N N 310 LYS HG3 H N N 311 LYS HD2 H N N 312 LYS HD3 H N N 313 LYS HE2 H N N 314 LYS HE3 H N N 315 LYS HZ1 H N N 316 LYS HZ2 H N N 317 LYS HZ3 H N N 318 LYS HXT H N N 319 MET N N N N 320 MET CA C N S 321 MET C C N N 322 MET O O N N 323 MET CB C N N 324 MET CG C N N 325 MET SD S N N 326 MET CE C N N 327 MET OXT O N N 328 MET H H N N 329 MET H2 H N N 330 MET HA H N N 331 MET HB2 H N N 332 MET HB3 H N N 333 MET HG2 H N N 334 MET HG3 H N N 335 MET HE1 H N N 336 MET HE2 H N N 337 MET HE3 H N N 338 MET HXT H N N 339 PHE N N N N 340 PHE CA C N S 341 PHE C C N N 342 PHE O O N N 343 PHE CB C N N 344 PHE CG C Y N 345 PHE CD1 C Y N 346 PHE CD2 C Y N 347 PHE CE1 C Y N 348 PHE CE2 C Y N 349 PHE CZ C Y N 350 PHE OXT O N N 351 PHE H H N N 352 PHE H2 H N N 353 PHE HA H N N 354 PHE HB2 H N N 355 PHE HB3 H N N 356 PHE HD1 H N N 357 PHE HD2 H N N 358 PHE HE1 H N N 359 PHE HE2 H N N 360 PHE HZ H N N 361 PHE HXT H N N 362 PRO N N N N 363 PRO CA C N S 364 PRO C C N N 365 PRO O O N N 366 PRO CB C N N 367 PRO CG C N N 368 PRO CD C N N 369 PRO OXT O N N 370 PRO H H N N 371 PRO HA H N N 372 PRO HB2 H N N 373 PRO HB3 H N N 374 PRO HG2 H N N 375 PRO HG3 H N N 376 PRO HD2 H N N 377 PRO HD3 H N N 378 PRO HXT H N N 379 SER N N N N 380 SER CA C N S 381 SER C C N N 382 SER O O N N 383 SER CB C N N 384 SER OG O N N 385 SER OXT O N N 386 SER H H N N 387 SER H2 H N N 388 SER HA H N N 389 SER HB2 H N N 390 SER HB3 H N N 391 SER HG H N N 392 SER HXT H N N 393 THR N N N N 394 THR CA C N S 395 THR C C N N 396 THR O O N N 397 THR CB C N R 398 THR OG1 O N N 399 THR CG2 C N N 400 THR OXT O N N 401 THR H H N N 402 THR H2 H N N 403 THR HA H N N 404 THR HB H N N 405 THR HG1 H N N 406 THR HG21 H N N 407 THR HG22 H N N 408 THR HG23 H N N 409 THR HXT H N N 410 TRP N N N N 411 TRP CA C N S 412 TRP C C N N 413 TRP O O N N 414 TRP CB C N N 415 TRP CG C Y N 416 TRP CD1 C Y N 417 TRP CD2 C Y N 418 TRP NE1 N Y N 419 TRP CE2 C Y N 420 TRP CE3 C Y N 421 TRP CZ2 C Y N 422 TRP CZ3 C Y N 423 TRP CH2 C Y N 424 TRP OXT O N N 425 TRP H H N N 426 TRP H2 H N N 427 TRP HA H N N 428 TRP HB2 H N N 429 TRP HB3 H N N 430 TRP HD1 H N N 431 TRP HE1 H N N 432 TRP HE3 H N N 433 TRP HZ2 H N N 434 TRP HZ3 H N N 435 TRP HH2 H N N 436 TRP HXT H N N 437 TYR N N N N 438 TYR CA C N S 439 TYR C C N N 440 TYR O O N N 441 TYR CB C N N 442 TYR CG C Y N 443 TYR CD1 C Y N 444 TYR CD2 C Y N 445 TYR CE1 C Y N 446 TYR CE2 C Y N 447 TYR CZ C Y N 448 TYR OH O N N 449 TYR OXT O N N 450 TYR H H N N 451 TYR H2 H N N 452 TYR HA H N N 453 TYR HB2 H N N 454 TYR HB3 H N N 455 TYR HD1 H N N 456 TYR HD2 H N N 457 TYR HE1 H N N 458 TYR HE2 H N N 459 TYR HH H N N 460 TYR HXT H N N 461 VAL N N N N 462 VAL CA C N S 463 VAL C C N N 464 VAL O O N N 465 VAL CB C N N 466 VAL CG1 C N N 467 VAL CG2 C N N 468 VAL OXT O N N 469 VAL H H N N 470 VAL H2 H N N 471 VAL HA H N N 472 VAL HB H N N 473 VAL HG11 H N N 474 VAL HG12 H N N 475 VAL HG13 H N N 476 VAL HG21 H N N 477 VAL HG22 H N N 478 VAL HG23 H N N 479 VAL HXT H N N 480 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IWD C1 C2 sing N N 1 A1IWD C3 C2 doub Y N 2 A1IWD C3 C4 sing Y N 3 A1IWD C2 C34 sing Y N 4 A1IWD C32 C31 sing N N 5 A1IWD C4 C5 doub Y N 6 A1IWD C34 C33 doub Y N 7 A1IWD C5 C33 sing Y N 8 A1IWD C5 N1 sing N N 9 A1IWD C31 N1 sing Y N 10 A1IWD C31 C30 doub Y N 11 A1IWD C29 C28 sing N N 12 A1IWD N1 N2 sing Y N 13 A1IWD C30 C28 sing N N 14 A1IWD C30 C6 sing Y N 15 A1IWD C28 N6 doub N N 16 A1IWD N2 C6 doub Y N 17 A1IWD C6 C7 sing N N 18 A1IWD N6 N3 sing N N 19 A1IWD C7 N3 sing N N 20 A1IWD C7 O1 doub N N 21 A1IWD N3 C8 sing N N 22 A1IWD C9 C8 sing N N 23 A1IWD C9 C10 sing N N 24 A1IWD C10 C11 sing N N 25 A1IWD C11 S1 sing N N 26 A1IWD O3 S1 doub N N 27 A1IWD O2 S1 doub N N 28 A1IWD S1 N4 sing N N 29 A1IWD N4 C12 sing N N 30 A1IWD N4 C22 sing N N 31 A1IWD C12 C13 sing N N 32 A1IWD C22 C23 sing N N 33 A1IWD C13 C14 sing N N 34 A1IWD C15 C14 doub Y N 35 A1IWD C15 C16 sing Y N 36 A1IWD C24 C23 sing N N 37 A1IWD C24 C25 sing N N 38 A1IWD C23 C27 sing N N 39 A1IWD C14 C21 sing Y N 40 A1IWD C27 C26 sing N N 41 A1IWD C16 C17 doub Y N 42 A1IWD C26 N5 sing N N 43 A1IWD C25 N5 sing N N 44 A1IWD C21 C18 doub Y N 45 A1IWD C17 C18 sing Y N 46 A1IWD C18 C19 sing N N 47 A1IWD C19 C20 sing N N 48 A1IWD C1 H3 sing N N 49 A1IWD C1 H1 sing N N 50 A1IWD C1 H2 sing N N 51 A1IWD C3 H4 sing N N 52 A1IWD C4 H5 sing N N 53 A1IWD C10 H10 sing N N 54 A1IWD C10 H11 sing N N 55 A1IWD C11 H12 sing N N 56 A1IWD C11 H13 sing N N 57 A1IWD C12 H14 sing N N 58 A1IWD C12 H15 sing N N 59 A1IWD C13 H16 sing N N 60 A1IWD C13 H17 sing N N 61 A1IWD C15 H18 sing N N 62 A1IWD C16 H19 sing N N 63 A1IWD C17 H20 sing N N 64 A1IWD C19 H21 sing N N 65 A1IWD C19 H22 sing N N 66 A1IWD C20 H46 sing N N 67 A1IWD C20 H24 sing N N 68 A1IWD C20 H23 sing N N 69 A1IWD C21 H25 sing N N 70 A1IWD C22 H26 sing N N 71 A1IWD C22 H27 sing N N 72 A1IWD C23 H28 sing N N 73 A1IWD C24 H30 sing N N 74 A1IWD C24 H29 sing N N 75 A1IWD C25 H31 sing N N 76 A1IWD C25 H32 sing N N 77 A1IWD C26 H35 sing N N 78 A1IWD C26 H34 sing N N 79 A1IWD C27 H36 sing N N 80 A1IWD C27 H37 sing N N 81 A1IWD C29 H38 sing N N 82 A1IWD C29 H39 sing N N 83 A1IWD C29 H40 sing N N 84 A1IWD C32 H42 sing N N 85 A1IWD C32 H43 sing N N 86 A1IWD C32 H41 sing N N 87 A1IWD C33 H44 sing N N 88 A1IWD C34 H45 sing N N 89 A1IWD C8 H6 sing N N 90 A1IWD C8 H7 sing N N 91 A1IWD C9 H8 sing N N 92 A1IWD C9 H9 sing N N 93 A1IWD N5 H33 sing N N 94 ALA N CA sing N N 95 ALA N H sing N N 96 ALA N H2 sing N N 97 ALA CA C sing N N 98 ALA CA CB sing N N 99 ALA CA HA sing N N 100 ALA C O doub N N 101 ALA C OXT sing N N 102 ALA CB HB1 sing N N 103 ALA CB HB2 sing N N 104 ALA CB HB3 sing N N 105 ALA OXT HXT sing N N 106 ARG N CA sing N N 107 ARG N H sing N N 108 ARG N H2 sing N N 109 ARG CA C sing N N 110 ARG CA CB sing N N 111 ARG CA HA sing N N 112 ARG C O doub N N 113 ARG C OXT sing N N 114 ARG CB CG sing N N 115 ARG CB HB2 sing N N 116 ARG CB HB3 sing N N 117 ARG CG CD sing N N 118 ARG CG HG2 sing N N 119 ARG CG HG3 sing N N 120 ARG CD NE sing N N 121 ARG CD HD2 sing N N 122 ARG CD HD3 sing N N 123 ARG NE CZ sing N N 124 ARG NE HE sing N N 125 ARG CZ NH1 sing N N 126 ARG CZ NH2 doub N N 127 ARG NH1 HH11 sing N N 128 ARG NH1 HH12 sing N N 129 ARG NH2 HH21 sing N N 130 ARG NH2 HH22 sing N N 131 ARG OXT HXT sing N N 132 ASN N CA sing N N 133 ASN N H sing N N 134 ASN N H2 sing N N 135 ASN CA C sing N N 136 ASN CA CB sing N N 137 ASN CA HA sing N N 138 ASN C O doub N N 139 ASN C OXT sing N N 140 ASN CB CG sing N N 141 ASN CB HB2 sing N N 142 ASN CB HB3 sing N N 143 ASN CG OD1 doub N N 144 ASN CG ND2 sing N N 145 ASN ND2 HD21 sing N N 146 ASN ND2 HD22 sing N N 147 ASN OXT HXT sing N N 148 ASP N CA sing N N 149 ASP N H sing N N 150 ASP N H2 sing N N 151 ASP CA C sing N N 152 ASP CA CB sing N N 153 ASP CA HA sing N N 154 ASP C O doub N N 155 ASP C OXT sing N N 156 ASP CB CG sing N N 157 ASP CB HB2 sing N N 158 ASP CB HB3 sing N N 159 ASP CG OD1 doub N N 160 ASP CG OD2 sing N N 161 ASP OD2 HD2 sing N N 162 ASP OXT HXT sing N N 163 CYS N CA sing N N 164 CYS N H sing N N 165 CYS N H2 sing N N 166 CYS CA C sing N N 167 CYS CA CB sing N N 168 CYS CA HA sing N N 169 CYS C O doub N N 170 CYS C OXT sing N N 171 CYS CB SG sing N N 172 CYS CB HB2 sing N N 173 CYS CB HB3 sing N N 174 CYS SG HG sing N N 175 CYS OXT HXT sing N N 176 GLN N CA sing N N 177 GLN N H sing N N 178 GLN N H2 sing N N 179 GLN CA C sing N N 180 GLN CA CB sing N N 181 GLN CA HA sing N N 182 GLN C O doub N N 183 GLN C OXT sing N N 184 GLN CB CG sing N N 185 GLN CB HB2 sing N N 186 GLN CB HB3 sing N N 187 GLN CG CD sing N N 188 GLN CG HG2 sing N N 189 GLN CG HG3 sing N N 190 GLN CD OE1 doub N N 191 GLN CD NE2 sing N N 192 GLN NE2 HE21 sing N N 193 GLN NE2 HE22 sing N N 194 GLN OXT HXT sing N N 195 GLU N CA sing N N 196 GLU N H sing N N 197 GLU N H2 sing N N 198 GLU CA C sing N N 199 GLU CA CB sing N N 200 GLU CA HA sing N N 201 GLU C O doub N N 202 GLU C OXT sing N N 203 GLU CB CG sing N N 204 GLU CB HB2 sing N N 205 GLU CB HB3 sing N N 206 GLU CG CD sing N N 207 GLU CG HG2 sing N N 208 GLU CG HG3 sing N N 209 GLU CD OE1 doub N N 210 GLU CD OE2 sing N N 211 GLU OE2 HE2 sing N N 212 GLU OXT HXT sing N N 213 GLY N CA sing N N 214 GLY N H sing N N 215 GLY N H2 sing N N 216 GLY CA C sing N N 217 GLY CA HA2 sing N N 218 GLY CA HA3 sing N N 219 GLY C O doub N N 220 GLY C OXT sing N N 221 GLY OXT HXT sing N N 222 HIS N CA sing N N 223 HIS N H sing N N 224 HIS N H2 sing N N 225 HIS CA C sing N N 226 HIS CA CB sing N N 227 HIS CA HA sing N N 228 HIS C O doub N N 229 HIS C OXT sing N N 230 HIS CB CG sing N N 231 HIS CB HB2 sing N N 232 HIS CB HB3 sing N N 233 HIS CG ND1 sing Y N 234 HIS CG CD2 doub Y N 235 HIS ND1 CE1 doub Y N 236 HIS ND1 HD1 sing N N 237 HIS CD2 NE2 sing Y N 238 HIS CD2 HD2 sing N N 239 HIS CE1 NE2 sing Y N 240 HIS CE1 HE1 sing N N 241 HIS NE2 HE2 sing N N 242 HIS OXT HXT sing N N 243 HOH O H1 sing N N 244 HOH O H2 sing N N 245 ILE N CA sing N N 246 ILE N H sing N N 247 ILE N H2 sing N N 248 ILE CA C sing N N 249 ILE CA CB sing N N 250 ILE CA HA sing N N 251 ILE C O doub N N 252 ILE C OXT sing N N 253 ILE CB CG1 sing N N 254 ILE CB CG2 sing N N 255 ILE CB HB sing N N 256 ILE CG1 CD1 sing N N 257 ILE CG1 HG12 sing N N 258 ILE CG1 HG13 sing N N 259 ILE CG2 HG21 sing N N 260 ILE CG2 HG22 sing N N 261 ILE CG2 HG23 sing N N 262 ILE CD1 HD11 sing N N 263 ILE CD1 HD12 sing N N 264 ILE CD1 HD13 sing N N 265 ILE OXT HXT sing N N 266 LEU N CA sing N N 267 LEU N H sing N N 268 LEU N H2 sing N N 269 LEU CA C sing N N 270 LEU CA CB sing N N 271 LEU CA HA sing N N 272 LEU C O doub N N 273 LEU C OXT sing N N 274 LEU CB CG sing N N 275 LEU CB HB2 sing N N 276 LEU CB HB3 sing N N 277 LEU CG CD1 sing N N 278 LEU CG CD2 sing N N 279 LEU CG HG sing N N 280 LEU CD1 HD11 sing N N 281 LEU CD1 HD12 sing N N 282 LEU CD1 HD13 sing N N 283 LEU CD2 HD21 sing N N 284 LEU CD2 HD22 sing N N 285 LEU CD2 HD23 sing N N 286 LEU OXT HXT sing N N 287 LYS N CA sing N N 288 LYS N H sing N N 289 LYS N H2 sing N N 290 LYS CA C sing N N 291 LYS CA CB sing N N 292 LYS CA HA sing N N 293 LYS C O doub N N 294 LYS C OXT sing N N 295 LYS CB CG sing N N 296 LYS CB HB2 sing N N 297 LYS CB HB3 sing N N 298 LYS CG CD sing N N 299 LYS CG HG2 sing N N 300 LYS CG HG3 sing N N 301 LYS CD CE sing N N 302 LYS CD HD2 sing N N 303 LYS CD HD3 sing N N 304 LYS CE NZ sing N N 305 LYS CE HE2 sing N N 306 LYS CE HE3 sing N N 307 LYS NZ HZ1 sing N N 308 LYS NZ HZ2 sing N N 309 LYS NZ HZ3 sing N N 310 LYS OXT HXT sing N N 311 MET N CA sing N N 312 MET N H sing N N 313 MET N H2 sing N N 314 MET CA C sing N N 315 MET CA CB sing N N 316 MET CA HA sing N N 317 MET C O doub N N 318 MET C OXT sing N N 319 MET CB CG sing N N 320 MET CB HB2 sing N N 321 MET CB HB3 sing N N 322 MET CG SD sing N N 323 MET CG HG2 sing N N 324 MET CG HG3 sing N N 325 MET SD CE sing N N 326 MET CE HE1 sing N N 327 MET CE HE2 sing N N 328 MET CE HE3 sing N N 329 MET OXT HXT sing N N 330 PHE N CA sing N N 331 PHE N H sing N N 332 PHE N H2 sing N N 333 PHE CA C sing N N 334 PHE CA CB sing N N 335 PHE CA HA sing N N 336 PHE C O doub N N 337 PHE C OXT sing N N 338 PHE CB CG sing N N 339 PHE CB HB2 sing N N 340 PHE CB HB3 sing N N 341 PHE CG CD1 doub Y N 342 PHE CG CD2 sing Y N 343 PHE CD1 CE1 sing Y N 344 PHE CD1 HD1 sing N N 345 PHE CD2 CE2 doub Y N 346 PHE CD2 HD2 sing N N 347 PHE CE1 CZ doub Y N 348 PHE CE1 HE1 sing N N 349 PHE CE2 CZ sing Y N 350 PHE CE2 HE2 sing N N 351 PHE CZ HZ sing N N 352 PHE OXT HXT sing N N 353 PRO N CA sing N N 354 PRO N CD sing N N 355 PRO N H sing N N 356 PRO CA C sing N N 357 PRO CA CB sing N N 358 PRO CA HA sing N N 359 PRO C O doub N N 360 PRO C OXT sing N N 361 PRO CB CG sing N N 362 PRO CB HB2 sing N N 363 PRO CB HB3 sing N N 364 PRO CG CD sing N N 365 PRO CG HG2 sing N N 366 PRO CG HG3 sing N N 367 PRO CD HD2 sing N N 368 PRO CD HD3 sing N N 369 PRO OXT HXT sing N N 370 SER N CA sing N N 371 SER N H sing N N 372 SER N H2 sing N N 373 SER CA C sing N N 374 SER CA CB sing N N 375 SER CA HA sing N N 376 SER C O doub N N 377 SER C OXT sing N N 378 SER CB OG sing N N 379 SER CB HB2 sing N N 380 SER CB HB3 sing N N 381 SER OG HG sing N N 382 SER OXT HXT sing N N 383 THR N CA sing N N 384 THR N H sing N N 385 THR N H2 sing N N 386 THR CA C sing N N 387 THR CA CB sing N N 388 THR CA HA sing N N 389 THR C O doub N N 390 THR C OXT sing N N 391 THR CB OG1 sing N N 392 THR CB CG2 sing N N 393 THR CB HB sing N N 394 THR OG1 HG1 sing N N 395 THR CG2 HG21 sing N N 396 THR CG2 HG22 sing N N 397 THR CG2 HG23 sing N N 398 THR OXT HXT sing N N 399 TRP N CA sing N N 400 TRP N H sing N N 401 TRP N H2 sing N N 402 TRP CA C sing N N 403 TRP CA CB sing N N 404 TRP CA HA sing N N 405 TRP C O doub N N 406 TRP C OXT sing N N 407 TRP CB CG sing N N 408 TRP CB HB2 sing N N 409 TRP CB HB3 sing N N 410 TRP CG CD1 doub Y N 411 TRP CG CD2 sing Y N 412 TRP CD1 NE1 sing Y N 413 TRP CD1 HD1 sing N N 414 TRP CD2 CE2 doub Y N 415 TRP CD2 CE3 sing Y N 416 TRP NE1 CE2 sing Y N 417 TRP NE1 HE1 sing N N 418 TRP CE2 CZ2 sing Y N 419 TRP CE3 CZ3 doub Y N 420 TRP CE3 HE3 sing N N 421 TRP CZ2 CH2 doub Y N 422 TRP CZ2 HZ2 sing N N 423 TRP CZ3 CH2 sing Y N 424 TRP CZ3 HZ3 sing N N 425 TRP CH2 HH2 sing N N 426 TRP OXT HXT sing N N 427 TYR N CA sing N N 428 TYR N H sing N N 429 TYR N H2 sing N N 430 TYR CA C sing N N 431 TYR CA CB sing N N 432 TYR CA HA sing N N 433 TYR C O doub N N 434 TYR C OXT sing N N 435 TYR CB CG sing N N 436 TYR CB HB2 sing N N 437 TYR CB HB3 sing N N 438 TYR CG CD1 doub Y N 439 TYR CG CD2 sing Y N 440 TYR CD1 CE1 sing Y N 441 TYR CD1 HD1 sing N N 442 TYR CD2 CE2 doub Y N 443 TYR CD2 HD2 sing N N 444 TYR CE1 CZ doub Y N 445 TYR CE1 HE1 sing N N 446 TYR CE2 CZ sing Y N 447 TYR CE2 HE2 sing N N 448 TYR CZ OH sing N N 449 TYR OH HH sing N N 450 TYR OXT HXT sing N N 451 VAL N CA sing N N 452 VAL N H sing N N 453 VAL N H2 sing N N 454 VAL CA C sing N N 455 VAL CA CB sing N N 456 VAL CA HA sing N N 457 VAL C O doub N N 458 VAL C OXT sing N N 459 VAL CB CG1 sing N N 460 VAL CB CG2 sing N N 461 VAL CB HB sing N N 462 VAL CG1 HG11 sing N N 463 VAL CG1 HG12 sing N N 464 VAL CG1 HG13 sing N N 465 VAL CG2 HG21 sing N N 466 VAL CG2 HG22 sing N N 467 VAL CG2 HG23 sing N N 468 VAL OXT HXT sing N N 469 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5E80 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9HMD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.017709 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013294 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012255 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ # loop_ #