HEADER OXIDOREDUCTASE 11-DEC-24 9HNZ TITLE ROOM TEMPERATURE STRUCTURE OF ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE TITLE 2 (ASPH) IN COMPLEX WITH FE, 2-OXOGLUTARATE AND HYDROXYLATED FACTOR X TITLE 3 DERIVED PEPTIDE FRAGMENT, 2 H O2 EXPOSURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ASPARTATE BETA-HYDROXYLASE,ASP BETA-HYDROXYLASE,PEPTIDE- COMPND 5 ASPARTATE BETA-DIOXYGENASE; COMPND 6 EC: 1.14.11.16; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: FACTOR X LIGHT CHAIN; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ASPH, BAH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS ASPH, ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE, O2 EXPOSURE, PRODUCT KEYWDS 2 COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.DE MUNNIK,P.RABE,A.BRASNETT,L.BREWITZ,C.J.SCHOFIELD REVDAT 1 24-DEC-25 9HNZ 0 JRNL AUTH M.DE MUNNIK,P.RABE,A.BRASNETT,L.BREWITZ,C.J.SCHOFIELD JRNL TITL ROOM TEMPERATURE STRUCTURE OF ASPARTYL/ASPARAGINYL JRNL TITL 2 BETA-HYDROXYLASE (ASPH) IN COMPLEX WITH FE, 2-OXOGLUTARATE JRNL TITL 3 AND HYDROXYLATED FACTOR X DERIVED PEPTIDE FRAGMENT, 2 H O2 JRNL TITL 4 EXPOSURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1-5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 22750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.790 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.1800 - 5.7800 1.00 1637 158 0.1524 0.1629 REMARK 3 2 5.7800 - 4.5900 1.00 1556 149 0.1557 0.1929 REMARK 3 3 4.5900 - 4.0100 1.00 1534 149 0.1379 0.1826 REMARK 3 4 4.0100 - 3.6400 1.00 1514 145 0.1537 0.2452 REMARK 3 5 3.6400 - 3.3800 1.00 1502 146 0.1971 0.2222 REMARK 3 6 3.3800 - 3.1800 1.00 1484 142 0.2307 0.2594 REMARK 3 7 3.1800 - 3.0200 1.00 1516 147 0.2583 0.3010 REMARK 3 8 3.0200 - 2.8900 1.00 1490 143 0.2753 0.2841 REMARK 3 9 2.8900 - 2.7800 0.99 1488 143 0.3126 0.3548 REMARK 3 10 2.7800 - 2.6800 0.99 1467 142 0.3484 0.3895 REMARK 3 11 2.6800 - 2.6000 0.98 1450 140 0.3469 0.4221 REMARK 3 12 2.6000 - 2.5300 0.96 1417 137 0.3542 0.3555 REMARK 3 13 2.5300 - 2.4600 0.93 1397 133 0.3617 0.4214 REMARK 3 14 2.4600 - 2.4000 0.88 1298 126 0.3709 0.3912 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.442 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.718 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3548 REMARK 3 ANGLE : 0.427 4814 REMARK 3 CHIRALITY : 0.038 516 REMARK 3 PLANARITY : 0.003 631 REMARK 3 DIHEDRAL : 12.364 1289 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 330 THROUGH 553 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0741 15.4399 13.4664 REMARK 3 T TENSOR REMARK 3 T11: 0.4182 T22: 0.6365 REMARK 3 T33: 0.4591 T12: -0.0235 REMARK 3 T13: 0.0846 T23: 0.0567 REMARK 3 L TENSOR REMARK 3 L11: 0.4456 L22: 3.8993 REMARK 3 L33: 4.8380 L12: 0.3679 REMARK 3 L13: 0.7194 L23: 3.1761 REMARK 3 S TENSOR REMARK 3 S11: 0.2554 S12: 0.0878 S13: -0.0101 REMARK 3 S21: -0.2098 S22: 0.0919 S23: -0.1865 REMARK 3 S31: -0.2522 S32: 0.3245 S33: -0.3140 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 554 THROUGH 758 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5560 25.3053 47.0697 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.4927 REMARK 3 T33: 0.3244 T12: 0.0184 REMARK 3 T13: -0.0094 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 2.6965 L22: 2.0165 REMARK 3 L33: 4.1624 L12: 0.4345 REMARK 3 L13: -1.6463 L23: -0.2959 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.3512 S13: 0.1188 REMARK 3 S21: -0.2132 S22: 0.0897 S23: 0.0035 REMARK 3 S31: -0.1385 S32: -0.3594 S33: -0.0669 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3454 20.9731 34.1982 REMARK 3 T TENSOR REMARK 3 T11: 0.5388 T22: 0.6465 REMARK 3 T33: 0.5316 T12: 0.0296 REMARK 3 T13: 0.0345 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 5.2387 L22: 7.3500 REMARK 3 L33: 6.8757 L12: -1.6886 REMARK 3 L13: -3.4797 L23: 5.5605 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: 0.5927 S13: -0.1468 REMARK 3 S21: 0.0167 S22: 0.6424 S23: -0.4550 REMARK 3 S31: -0.0030 S32: 1.0025 S33: -0.6811 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7092 12.2110 26.1957 REMARK 3 T TENSOR REMARK 3 T11: 0.8347 T22: 0.8530 REMARK 3 T33: 0.7575 T12: -0.1490 REMARK 3 T13: 0.1338 T23: -0.2346 REMARK 3 L TENSOR REMARK 3 L11: 1.2411 L22: 5.6224 REMARK 3 L33: 4.4000 L12: -1.4439 REMARK 3 L13: -1.4817 L23: 4.9446 REMARK 3 S TENSOR REMARK 3 S11: -0.5999 S12: 1.0813 S13: -1.3792 REMARK 3 S21: -0.5596 S22: -0.1742 S23: 0.5871 REMARK 3 S31: -0.2246 S32: -0.4042 S33: 0.8560 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3836 9.4049 18.3994 REMARK 3 T TENSOR REMARK 3 T11: 1.5029 T22: 1.0133 REMARK 3 T33: 1.9470 T12: -0.2636 REMARK 3 T13: -0.7769 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 6.6874 L22: 7.7888 REMARK 3 L33: 7.5884 L12: 6.2012 REMARK 3 L13: -3.2156 L23: -6.4913 REMARK 3 S TENSOR REMARK 3 S11: -1.3376 S12: 2.5468 S13: -1.4728 REMARK 3 S21: 1.0147 S22: 0.6890 S23: -0.1402 REMARK 3 S31: 0.4327 S32: -1.9941 S33: 0.6600 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9HNZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1292143916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-24 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999980 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS DIALS.STILLS_PROCESS REMARK 200 DATA SCALING SOFTWARE : CCTBX.XFEL.MERGE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23199 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 73.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 54.81 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.8260 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 33.52 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.427 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NEEDLE MORPHOLOGY, AVERAGE DISTRIBUTION ~3 UM X 3 UM X 80 REMARK 200 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG3350, 0.1 M BIS TRIS PROPANE PH REMARK 280 7.5, 0.1 M KSCN, BATCH MODE, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.44000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.31250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.20200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.31250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.44000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.20200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 86 REMARK 465 GLY B 87 REMARK 465 ASP B 88 REMARK 465 GLN B 89 REMARK 465 SER B 90 REMARK 465 GLU B 91 REMARK 465 THR B 92 REMARK 465 SER B 93 REMARK 465 PRO B 94 REMARK 465 SER B 95 REMARK 465 GLN B 96 REMARK 465 ASN B 97 REMARK 465 GLN B 98 REMARK 465 GLY B 99 REMARK 465 GLU B 117 REMARK 465 GLY B 118 REMARK 465 LYS B 119 REMARK 465 ASN B 120 REMARK 465 SER B 121 REMARK 465 GLU B 122 REMARK 465 LEU B 123 REMARK 465 PHE B 124 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 330 N CA CB CG CD CE NZ REMARK 470 LYS A 332 CD CE NZ REMARK 470 LYS A 336 CG CD CE NZ REMARK 470 LYS A 339 CE NZ REMARK 470 LYS A 342 CD CE NZ REMARK 470 LYS A 350 CG CD CE NZ REMARK 470 LYS A 353 CE NZ REMARK 470 ARG A 354 NE CZ NH1 NH2 REMARK 470 LYS A 356 CG CD CE NZ REMARK 470 ILE A 357 CG1 CG2 CD1 REMARK 470 GLU A 358 OE1 OE2 REMARK 470 GLU A 359 CG CD OE1 OE2 REMARK 470 VAL A 361 CG1 CG2 REMARK 470 ARG A 369 CD NE CZ NH1 NH2 REMARK 470 LYS A 370 CD CE NZ REMARK 470 LYS A 391 CD CE NZ REMARK 470 ARG A 393 CD NE CZ NH1 NH2 REMARK 470 GLN A 406 OE1 NE2 REMARK 470 LYS A 420 CE NZ REMARK 470 LYS A 424 CE NZ REMARK 470 ARG A 437 NE CZ NH1 NH2 REMARK 470 ARG A 445 CD NE CZ NH1 NH2 REMARK 470 VAL A 447 CG1 CG2 REMARK 470 GLN A 448 CD OE1 NE2 REMARK 470 LYS A 457 NZ REMARK 470 ILE A 467 CD1 REMARK 470 LYS A 475 NZ REMARK 470 ASN A 486 OD1 ND2 REMARK 470 LYS A 491 NZ REMARK 470 LYS A 503 CE NZ REMARK 470 LYS A 512 NZ REMARK 470 LYS A 541 CG CD CE NZ REMARK 470 GLU A 542 CG CD OE1 OE2 REMARK 470 LYS A 545 CG CD CE NZ REMARK 470 GLU A 548 CD OE1 OE2 REMARK 470 LEU A 549 CG CD1 CD2 REMARK 470 LYS A 552 CG CD CE NZ REMARK 470 ARG A 553 CZ NH1 NH2 REMARK 470 LYS A 579 CD CE NZ REMARK 470 LYS A 607 CE NZ REMARK 470 ARG A 635 CD NE CZ NH1 NH2 REMARK 470 GLU A 638 CD OE1 OE2 REMARK 470 LYS A 642 CD CE NZ REMARK 470 LYS A 653 CE NZ REMARK 470 LYS A 697 CD CE NZ REMARK 470 GLU A 698 CD OE1 OE2 REMARK 470 LYS A 701 CE NZ REMARK 470 LYS A 715 CE NZ REMARK 470 GLN A 750 CD OE1 NE2 REMARK 470 ARG A 753 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 100 CE NZ REMARK 470 LEU B 113 CG CD1 CD2 REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 542 6.57 -68.80 REMARK 500 TYR A 583 48.46 -90.67 REMARK 500 ALA A 608 61.29 -155.93 REMARK 500 ALA A 705 -113.22 56.04 REMARK 500 LYS B 102 -74.82 -115.19 REMARK 500 LEU B 105 75.92 -151.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 802 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 679 NE2 REMARK 620 2 HIS A 725 NE2 89.7 REMARK 620 3 SIN A 801 O4 107.2 110.1 REMARK 620 4 HOH A 913 O 114.0 85.2 136.1 REMARK 620 5 BH2 B 103 OB 89.9 165.4 83.9 81.6 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Q9F RELATED DB: PDB DBREF 9HNZ A 330 758 UNP Q12797 ASPH_HUMAN 330 758 DBREF 9HNZ B 86 124 UNP P00742 FA10_HUMAN 86 124 SEQADV 9HNZ SER B 90 UNP P00742 CYS 90 ENGINEERED MUTATION SEQADV 9HNZ SER B 95 UNP P00742 CYS 95 ENGINEERED MUTATION SEQADV 9HNZ SER B 112 UNP P00742 CYS 112 ENGINEERED MUTATION SEQADV 9HNZ SER B 121 UNP P00742 CYS 121 ENGINEERED MUTATION SEQRES 1 A 429 LYS PRO LYS LEU LEU ASN LYS PHE ASP LYS THR ILE LYS SEQRES 2 A 429 ALA GLU LEU ASP ALA ALA GLU LYS LEU ARG LYS ARG GLY SEQRES 3 A 429 LYS ILE GLU GLU ALA VAL ASN ALA PHE LYS GLU LEU VAL SEQRES 4 A 429 ARG LYS TYR PRO GLN SER PRO ARG ALA ARG TYR GLY LYS SEQRES 5 A 429 ALA GLN CYS GLU ASP ASP LEU ALA GLU LYS ARG ARG SER SEQRES 6 A 429 ASN GLU VAL LEU ARG GLY ALA ILE GLU THR TYR GLN GLU SEQRES 7 A 429 VAL ALA SER LEU PRO ASP VAL PRO ALA ASP LEU LEU LYS SEQRES 8 A 429 LEU SER LEU LYS ARG ARG SER ASP ARG GLN GLN PHE LEU SEQRES 9 A 429 GLY HIS MET ARG GLY SER LEU LEU THR LEU GLN ARG LEU SEQRES 10 A 429 VAL GLN LEU PHE PRO ASN ASP THR SER LEU LYS ASN ASP SEQRES 11 A 429 LEU GLY VAL GLY TYR LEU LEU ILE GLY ASP ASN ASP ASN SEQRES 12 A 429 ALA LYS LYS VAL TYR GLU GLU VAL LEU SER VAL THR PRO SEQRES 13 A 429 ASN ASP GLY PHE ALA LYS VAL HIS TYR GLY PHE ILE LEU SEQRES 14 A 429 LYS ALA GLN ASN LYS ILE ALA GLU SER ILE PRO TYR LEU SEQRES 15 A 429 LYS GLU GLY ILE GLU SER GLY ASP PRO GLY THR ASP ASP SEQRES 16 A 429 GLY ARG PHE TYR PHE HIS LEU GLY ASP ALA MET GLN ARG SEQRES 17 A 429 VAL GLY ASN LYS GLU ALA TYR LYS TRP TYR GLU LEU GLY SEQRES 18 A 429 HIS LYS ARG GLY HIS PHE ALA SER VAL TRP GLN ARG SER SEQRES 19 A 429 LEU TYR ASN VAL ASN GLY LEU LYS ALA GLN PRO TRP TRP SEQRES 20 A 429 THR PRO LYS GLU THR GLY TYR THR GLU LEU VAL LYS SER SEQRES 21 A 429 LEU GLU ARG ASN TRP LYS LEU ILE ARG ASP GLU GLY LEU SEQRES 22 A 429 ALA VAL MET ASP LYS ALA LYS GLY LEU PHE LEU PRO GLU SEQRES 23 A 429 ASP GLU ASN LEU ARG GLU LYS GLY ASP TRP SER GLN PHE SEQRES 24 A 429 THR LEU TRP GLN GLN GLY ARG ARG ASN GLU ASN ALA CYS SEQRES 25 A 429 LYS GLY ALA PRO LYS THR CYS THR LEU LEU GLU LYS PHE SEQRES 26 A 429 PRO GLU THR THR GLY CYS ARG ARG GLY GLN ILE LYS TYR SEQRES 27 A 429 SER ILE MET HIS PRO GLY THR HIS VAL TRP PRO HIS THR SEQRES 28 A 429 GLY PRO THR ASN CYS ARG LEU ARG MET HIS LEU GLY LEU SEQRES 29 A 429 VAL ILE PRO LYS GLU GLY CYS LYS ILE ARG CYS ALA ASN SEQRES 30 A 429 GLU THR LYS THR TRP GLU GLU GLY LYS VAL LEU ILE PHE SEQRES 31 A 429 ASP ASP SER PHE GLU HIS GLU VAL TRP GLN ASP ALA SER SEQRES 32 A 429 SER PHE ARG LEU ILE PHE ILE VAL ASP VAL TRP HIS PRO SEQRES 33 A 429 GLU LEU THR PRO GLN GLN ARG ARG SER LEU PRO ALA ILE SEQRES 1 B 39 ASP GLY ASP GLN SER GLU THR SER PRO SER GLN ASN GLN SEQRES 2 B 39 GLY LYS CYS LYS BH2 GLY LEU GLY GLU TYR THR CYS THR SEQRES 3 B 39 SER LEU GLU GLY PHE GLU GLY LYS ASN SER GLU LEU PHE MODRES 9HNZ BH2 B 103 ASP MODIFIED RESIDUE HET BH2 B 103 9 HET SIN A 801 8 HET FE A 802 1 HETNAM BH2 (3R)-3-HYDROXY-L-ASPARTIC ACID HETNAM SIN SUCCINIC ACID HETNAM FE FE (III) ION FORMUL 2 BH2 C4 H7 N O5 FORMUL 3 SIN C4 H6 O4 FORMUL 4 FE FE 3+ FORMUL 5 HOH *50(H2 O) HELIX 1 AA1 ASN A 335 THR A 340 1 6 HELIX 2 AA2 ILE A 341 GLY A 355 1 15 HELIX 3 AA3 LYS A 356 TYR A 371 1 16 HELIX 4 AA4 SER A 374 ARG A 393 1 20 HELIX 5 AA5 SER A 394 LEU A 411 1 18 HELIX 6 AA6 PRO A 415 LEU A 433 1 19 HELIX 7 AA7 HIS A 435 PHE A 450 1 16 HELIX 8 AA8 ASP A 453 GLY A 468 1 16 HELIX 9 AA9 ASP A 469 THR A 484 1 16 HELIX 10 AB1 ASP A 487 GLN A 501 1 15 HELIX 11 AB2 LYS A 503 SER A 517 1 15 HELIX 12 AB3 ASP A 524 GLY A 539 1 16 HELIX 13 AB4 GLU A 542 ARG A 553 1 12 HELIX 14 AB5 THR A 577 GLY A 582 1 6 HELIX 15 AB6 TYR A 583 ASN A 593 1 11 HELIX 16 AB7 ASN A 593 ALA A 608 1 16 HELIX 17 AB8 LYS A 609 PHE A 612 5 4 HELIX 18 AB9 ASN A 637 LYS A 642 1 6 HELIX 19 AC1 ALA A 644 GLU A 652 1 9 HELIX 20 AC2 PHE A 654 GLY A 659 1 6 HELIX 21 AC3 THR A 748 LEU A 755 1 8 SHEET 1 AA1 7 TRP A 575 TRP A 576 0 SHEET 2 AA1 7 VAL A 716 PHE A 719 -1 O ILE A 718 N TRP A 576 SHEET 3 AA1 7 ARG A 686 VAL A 694 -1 N HIS A 690 O LEU A 717 SHEET 4 AA1 7 ARG A 735 TRP A 743 -1 O PHE A 738 N LEU A 691 SHEET 5 AA1 7 GLN A 664 MET A 670 -1 N LYS A 666 O ILE A 739 SHEET 6 AA1 7 TRP A 625 GLN A 632 -1 N LEU A 630 O ILE A 665 SHEET 7 AA1 7 LEU A 613 PRO A 614 -1 N LEU A 613 O GLN A 627 SHEET 1 AA2 7 TRP A 575 TRP A 576 0 SHEET 2 AA2 7 VAL A 716 PHE A 719 -1 O ILE A 718 N TRP A 576 SHEET 3 AA2 7 ARG A 686 VAL A 694 -1 N HIS A 690 O LEU A 717 SHEET 4 AA2 7 ARG A 735 TRP A 743 -1 O PHE A 738 N LEU A 691 SHEET 5 AA2 7 GLN A 664 MET A 670 -1 N LYS A 666 O ILE A 739 SHEET 6 AA2 7 TRP A 625 GLN A 632 -1 N LEU A 630 O ILE A 665 SHEET 7 AA2 7 ARG A 635 ARG A 636 -1 O ARG A 635 N GLN A 632 SHEET 1 AA3 5 ARG A 620 LYS A 622 0 SHEET 2 AA3 5 THR A 674 HIS A 679 -1 O HIS A 675 N GLU A 621 SHEET 3 AA3 5 HIS A 725 GLN A 729 -1 O GLN A 729 N THR A 674 SHEET 4 AA3 5 CYS A 700 CYS A 704 -1 N ARG A 703 O GLU A 726 SHEET 5 AA3 5 GLU A 707 LYS A 709 -1 O LYS A 709 N ILE A 702 SSBOND 1 CYS A 641 CYS A 648 1555 1555 2.03 SSBOND 2 CYS B 101 CYS B 110 1555 1555 2.03 LINK C LYS B 102 N BH2 B 103 1555 1555 1.33 LINK C BH2 B 103 N GLY B 104 1555 1555 1.33 LINK NE2 HIS A 679 FE FE A 802 1555 1555 2.19 LINK NE2 HIS A 725 FE FE A 802 1555 1555 2.02 LINK O4 BSIN A 801 FE FE A 802 1555 1555 2.33 LINK FE FE A 802 O HOH A 913 1555 1555 2.50 LINK FE FE A 802 OB BH2 B 103 1555 1555 2.76 CRYST1 50.880 90.404 124.625 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019654 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011061 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008024 0.00000 CONECT 2414 2458 CONECT 2458 2414 CONECT 2710 3468 CONECT 3067 3468 CONECT 3352 3420 CONECT 3355 3363 CONECT 3362 3364 3365 3371 CONECT 3363 3355 3365 CONECT 3364 3362 CONECT 3365 3362 3363 3366 CONECT 3366 3365 3367 3368 CONECT 3367 3366 3468 CONECT 3368 3366 3369 3370 CONECT 3369 3368 CONECT 3370 3368 CONECT 3371 3362 CONECT 3420 3352 CONECT 3460 3461 3462 3463 CONECT 3461 3460 CONECT 3462 3460 CONECT 3463 3460 3464 CONECT 3464 3463 3465 CONECT 3465 3464 3466 3467 CONECT 3466 3465 CONECT 3467 3465 3468 CONECT 3468 2710 3067 3367 3467 CONECT 3468 3481 CONECT 3481 3468 MASTER 404 0 3 21 19 0 0 6 3508 2 28 36 END