HEADER LYASE 12-DEC-24 9HP0 TITLE VARIANT R451K OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE-DOMAIN OF TITLE 2 HUMAN UMPS IN COMPLEX WITH THE PRODUCT UMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: URIDINE 5'-MONOPHOSPHATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: UMP SYNTHASE; COMPND 5 EC: 2.4.2.10,4.1.1.23; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UMPS, OK/SW-CL.21; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS URIDINE 5'-MONOPHOSPHATE SYNTHASE PYRIMIDINE METABOLISM HOMO SAPIENS, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR L.L.KIRCK,K.TITTMANN REVDAT 1 24-JUN-26 9HP0 0 JRNL AUTH L.L.KIRCK,K.TITTMANN JRNL TITL VARIANT R451K OF OROTIDINE 5'-MONOPHOSPHATE JRNL TITL 2 DECARBOXYLASE-DOMAIN OF HUMAN UMPS IN COMPLEX WITH THE JRNL TITL 3 PRODUCT UMP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 98993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5400 - 4.4700 0.99 3244 170 0.1663 0.1937 REMARK 3 2 4.4700 - 3.5500 0.99 3212 169 0.1414 0.1554 REMARK 3 3 3.5500 - 3.1000 0.99 3166 167 0.1627 0.1800 REMARK 3 4 3.1000 - 2.8200 0.99 3172 167 0.1809 0.1949 REMARK 3 5 2.8200 - 2.6200 0.99 3176 167 0.1773 0.1837 REMARK 3 6 2.6200 - 2.4600 0.99 3125 165 0.1659 0.1884 REMARK 3 7 2.4600 - 2.3400 0.99 3148 165 0.1596 0.1786 REMARK 3 8 2.3400 - 2.2400 0.99 3148 166 0.1598 0.1842 REMARK 3 9 2.2400 - 2.1500 0.99 3162 166 0.1579 0.1865 REMARK 3 10 2.1500 - 2.0800 0.99 3114 164 0.1623 0.1872 REMARK 3 11 2.0800 - 2.0100 0.99 3172 167 0.1729 0.1958 REMARK 3 12 2.0100 - 1.9500 0.98 3094 161 0.1641 0.1810 REMARK 3 13 1.9500 - 1.9000 0.98 3117 165 0.1547 0.1878 REMARK 3 14 1.9000 - 1.8600 0.99 3119 164 0.1671 0.1854 REMARK 3 15 1.8600 - 1.8100 0.99 3090 162 0.1714 0.2247 REMARK 3 16 1.8100 - 1.7800 0.99 3122 165 0.1816 0.2182 REMARK 3 17 1.7800 - 1.7400 0.99 3136 165 0.1938 0.2232 REMARK 3 18 1.7400 - 1.7100 0.99 3102 164 0.1989 0.2615 REMARK 3 19 1.7100 - 1.6800 0.99 3132 165 0.2065 0.2428 REMARK 3 20 1.6800 - 1.6500 0.99 3119 164 0.2036 0.2504 REMARK 3 21 1.6500 - 1.6200 0.99 3095 163 0.2016 0.2468 REMARK 3 22 1.6200 - 1.6000 0.99 3111 164 0.2074 0.2128 REMARK 3 23 1.6000 - 1.5700 0.99 3144 166 0.2161 0.2548 REMARK 3 24 1.5700 - 1.5500 0.99 3088 163 0.2365 0.2479 REMARK 3 25 1.5500 - 1.5300 0.99 3131 164 0.2422 0.2994 REMARK 3 26 1.5300 - 1.5100 0.99 3128 164 0.2631 0.2582 REMARK 3 27 1.5100 - 1.4900 0.99 3090 163 0.2735 0.2960 REMARK 3 28 1.4900 - 1.4700 0.99 3176 167 0.3027 0.2994 REMARK 3 29 1.4700 - 1.4600 0.99 3096 162 0.3143 0.3379 REMARK 3 30 1.4600 - 1.4400 0.99 3116 164 0.3392 0.3523 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 4082 REMARK 3 ANGLE : 1.646 5536 REMARK 3 CHIRALITY : 0.193 638 REMARK 3 PLANARITY : 0.015 699 REMARK 3 DIHEDRAL : 15.134 1548 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -21.1821 0.3439 22.3332 REMARK 3 T TENSOR REMARK 3 T11: 0.2484 T22: 0.1494 REMARK 3 T33: 0.2376 T12: 0.0032 REMARK 3 T13: -0.0057 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.6385 L22: 1.5132 REMARK 3 L33: 0.7038 L12: 0.1940 REMARK 3 L13: -0.6079 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: 0.0776 S12: 0.0605 S13: -0.1112 REMARK 3 S21: -0.2469 S22: -0.0405 S23: 0.1361 REMARK 3 S31: -0.1330 S32: -0.0289 S33: -0.0334 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9HP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1292143784. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.6888 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X CDTE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99073 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 35.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS/HCL PH 7.0, 1.7 - 1.9 M REMARK 280 AMMONIUM SULFATE, 10 MM GLUTATHION PH 8.0, 5% (W/V) GLYCEROL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.91500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 424 REMARK 465 GLY A 425 REMARK 465 ASP A 426 REMARK 465 ASN A 427 REMARK 465 LEU A 428 REMARK 465 GLY A 429 REMARK 465 VAL A 480 REMARK 465 ALA B 423 REMARK 465 GLY B 424 REMARK 465 GLY B 425 REMARK 465 ASP B 426 REMARK 465 ASN B 427 REMARK 465 LEU B 428 REMARK 465 GLY B 429 REMARK 465 GLN B 430 REMARK 465 GLN B 431 REMARK 465 VAL B 480 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 223 CG SD CE REMARK 470 MET B 223 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR B 432 O2P U5P B 501 1.48 REMARK 500 O HOH A 757 O HOH A 759 1.96 REMARK 500 OH TYR A 432 O2P U5P A 501 2.12 REMARK 500 O HOH A 729 O HOH A 732 2.12 REMARK 500 O HOH A 704 O HOH A 740 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL B 322 CB VAL B 322 CG2 -0.189 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 295 CG - SD - CE ANGL. DEV. = -20.7 DEGREES REMARK 500 ASP A 338 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 LEU A 460 CB - CG - CD2 ANGL. DEV. = 10.3 DEGREES REMARK 500 LEU B 262 CB - CG - CD1 ANGL. DEV. = -11.9 DEGREES REMARK 500 MET B 295 CG - SD - CE ANGL. DEV. = -17.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 306 75.97 68.76 REMARK 500 ALA A 316 -8.12 -144.47 REMARK 500 PHE A 396 -37.39 -131.06 REMARK 500 GLU B 306 78.53 64.39 REMARK 500 ALA B 316 37.33 -164.95 REMARK 500 ILE B 318 172.43 -56.30 REMARK 500 PHE B 396 -39.40 -131.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 363 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 759 DISTANCE = 7.12 ANGSTROMS DBREF 9HP0 A 224 480 UNP P11172 UMPS_HUMAN 224 480 DBREF 9HP0 B 224 480 UNP P11172 UMPS_HUMAN 224 480 SEQADV 9HP0 MET A 223 UNP P11172 INITIATING METHIONINE SEQADV 9HP0 LYS A 451 UNP P11172 ARG 451 ENGINEERED MUTATION SEQADV 9HP0 MET B 223 UNP P11172 INITIATING METHIONINE SEQADV 9HP0 LYS B 451 UNP P11172 ARG 451 ENGINEERED MUTATION SEQRES 1 A 258 MET GLU LEU SER PHE GLY ALA ARG ALA GLU LEU PRO ARG SEQRES 2 A 258 ILE HIS PRO VAL ALA SER LYS LEU LEU ARG LEU MET GLN SEQRES 3 A 258 LYS LYS GLU THR ASN LEU CYS LEU SER ALA ASP VAL SER SEQRES 4 A 258 LEU ALA ARG GLU LEU LEU GLN LEU ALA ASP ALA LEU GLY SEQRES 5 A 258 PRO SER ILE CYS MET LEU LYS THR HIS VAL ASP ILE LEU SEQRES 6 A 258 ASN ASP PHE THR LEU ASP VAL MET LYS GLU LEU ILE THR SEQRES 7 A 258 LEU ALA LYS CSS HIS GLU PHE LEU ILE PHE GLU ASP ARG SEQRES 8 A 258 LYS PHE ALA ASP ILE GLY ASN THR VAL LYS LYS GLN TYR SEQRES 9 A 258 GLU GLY GLY ILE PHE LYS ILE ALA SER TRP ALA ASP LEU SEQRES 10 A 258 VAL ASN ALA HIS VAL VAL PRO GLY SER GLY VAL VAL LYS SEQRES 11 A 258 GLY LEU GLN GLU VAL GLY LEU PRO LEU HIS ARG GLY CYS SEQRES 12 A 258 LEU LEU ILE ALA GLU MET SER SER THR GLY SER LEU ALA SEQRES 13 A 258 THR GLY ASP TYR THR ARG ALA ALA VAL ARG MET ALA GLU SEQRES 14 A 258 GLU HIS SER GLU PHE VAL VAL GLY PHE ILE SER GLY SER SEQRES 15 A 258 ARG VAL SER MET LYS PRO GLU PHE LEU HIS LEU THR PRO SEQRES 16 A 258 GLY VAL GLN LEU GLU ALA GLY GLY ASP ASN LEU GLY GLN SEQRES 17 A 258 GLN TYR ASN SER PRO GLN GLU VAL ILE GLY LYS ARG GLY SEQRES 18 A 258 SER ASP ILE ILE ILE VAL GLY LYS GLY ILE ILE SER ALA SEQRES 19 A 258 ALA ASP ARG LEU GLU ALA ALA GLU MET TYR ARG LYS ALA SEQRES 20 A 258 ALA TRP GLU ALA TYR LEU SER ARG LEU GLY VAL SEQRES 1 B 258 MET GLU LEU SER PHE GLY ALA ARG ALA GLU LEU PRO ARG SEQRES 2 B 258 ILE HIS PRO VAL ALA SER LYS LEU LEU ARG LEU MET GLN SEQRES 3 B 258 LYS LYS GLU THR ASN LEU CYS LEU SER ALA ASP VAL SER SEQRES 4 B 258 LEU ALA ARG GLU LEU LEU GLN LEU ALA ASP ALA LEU GLY SEQRES 5 B 258 PRO SER ILE CYS MET LEU LYS THR HIS VAL ASP ILE LEU SEQRES 6 B 258 ASN ASP PHE THR LEU ASP VAL MET LYS GLU LEU ILE THR SEQRES 7 B 258 LEU ALA LYS CSS HIS GLU PHE LEU ILE PHE GLU ASP ARG SEQRES 8 B 258 LYS PHE ALA ASP ILE GLY ASN THR VAL LYS LYS GLN TYR SEQRES 9 B 258 GLU GLY GLY ILE PHE LYS ILE ALA SER TRP ALA ASP LEU SEQRES 10 B 258 VAL ASN ALA HIS VAL VAL PRO GLY SER GLY VAL VAL LYS SEQRES 11 B 258 GLY LEU GLN GLU VAL GLY LEU PRO LEU HIS ARG GLY CYS SEQRES 12 B 258 LEU LEU ILE ALA GLU MET SER SER THR GLY SER LEU ALA SEQRES 13 B 258 THR GLY ASP TYR THR ARG ALA ALA VAL ARG MET ALA GLU SEQRES 14 B 258 GLU HIS SER GLU PHE VAL VAL GLY PHE ILE SER GLY SER SEQRES 15 B 258 ARG VAL SER MET LYS PRO GLU PHE LEU HIS LEU THR PRO SEQRES 16 B 258 GLY VAL GLN LEU GLU ALA GLY GLY ASP ASN LEU GLY GLN SEQRES 17 B 258 GLN TYR ASN SER PRO GLN GLU VAL ILE GLY LYS ARG GLY SEQRES 18 B 258 SER ASP ILE ILE ILE VAL GLY LYS GLY ILE ILE SER ALA SEQRES 19 B 258 ALA ASP ARG LEU GLU ALA ALA GLU MET TYR ARG LYS ALA SEQRES 20 B 258 ALA TRP GLU ALA TYR LEU SER ARG LEU GLY VAL MODRES 9HP0 CSS A 304 CYS MODIFIED RESIDUE MODRES 9HP0 CSS B 304 CYS MODIFIED RESIDUE HET CSS A 304 12 HET CSS B 304 12 HET U5P A 501 64 HET U5P B 501 64 HETNAM CSS S-MERCAPTOCYSTEINE HETNAM U5P URIDINE-5'-MONOPHOSPHATE FORMUL 1 CSS 2(C3 H7 N O2 S2) FORMUL 3 U5P 2(C9 H13 N2 O9 P) FORMUL 5 HOH *301(H2 O) HELIX 1 AA1 SER A 226 ALA A 231 1 6 HELIX 2 AA2 HIS A 237 GLU A 251 1 15 HELIX 3 AA3 LEU A 262 GLY A 274 1 13 HELIX 4 AA4 PRO A 275 ILE A 277 5 3 HELIX 5 AA5 HIS A 283 LEU A 287 5 5 HELIX 6 AA6 THR A 291 GLU A 306 1 16 HELIX 7 AA7 ILE A 318 GLY A 328 1 11 HELIX 8 AA8 LYS A 332 TRP A 336 5 5 HELIX 9 AA9 SER A 348 LEU A 359 1 12 HELIX 10 AB1 GLY A 380 HIS A 393 1 14 HELIX 11 AB2 SER A 434 GLY A 440 1 7 HELIX 12 AB3 GLY A 450 SER A 455 1 6 HELIX 13 AB4 ASP A 458 GLY A 479 1 22 HELIX 14 AB5 SER B 226 ALA B 231 1 6 HELIX 15 AB6 HIS B 237 GLU B 251 1 15 HELIX 16 AB7 LEU B 262 GLY B 274 1 13 HELIX 17 AB8 PRO B 275 ILE B 277 5 3 HELIX 18 AB9 HIS B 283 LEU B 287 5 5 HELIX 19 AC1 THR B 291 GLU B 306 1 16 HELIX 20 AC2 ILE B 318 GLY B 328 1 11 HELIX 21 AC3 LYS B 332 TRP B 336 5 5 HELIX 22 AC4 SER B 348 LEU B 359 1 12 HELIX 23 AC5 GLY B 380 HIS B 393 1 14 HELIX 24 AC6 SER B 434 GLY B 440 1 7 HELIX 25 AC7 GLY B 450 SER B 455 1 6 HELIX 26 AC8 ASP B 458 GLY B 479 1 22 SHEET 1 AA1 9 LEU A 254 SER A 257 0 SHEET 2 AA1 9 MET A 279 THR A 282 1 O LYS A 281 N LEU A 256 SHEET 3 AA1 9 LEU A 308 PHE A 315 1 O PHE A 310 N LEU A 280 SHEET 4 AA1 9 LEU A 339 HIS A 343 1 O HIS A 343 N PHE A 315 SHEET 5 AA1 9 GLY A 364 ILE A 368 1 O ILE A 368 N ALA A 342 SHEET 6 AA1 9 VAL A 397 ILE A 401 1 O VAL A 398 N CYS A 365 SHEET 7 AA1 9 LEU A 413 THR A 416 1 O LEU A 415 N PHE A 400 SHEET 8 AA1 9 ILE A 446 VAL A 449 1 O ILE A 448 N THR A 416 SHEET 9 AA1 9 LEU A 254 SER A 257 1 N CYS A 255 O ILE A 447 SHEET 1 AA2 9 LEU B 254 SER B 257 0 SHEET 2 AA2 9 MET B 279 THR B 282 1 O LYS B 281 N LEU B 256 SHEET 3 AA2 9 LEU B 308 PHE B 315 1 O PHE B 310 N LEU B 280 SHEET 4 AA2 9 LEU B 339 HIS B 343 1 O HIS B 343 N PHE B 315 SHEET 5 AA2 9 GLY B 364 ILE B 368 1 O ILE B 368 N ALA B 342 SHEET 6 AA2 9 VAL B 397 ILE B 401 1 O VAL B 398 N CYS B 365 SHEET 7 AA2 9 LEU B 413 THR B 416 1 O LEU B 415 N PHE B 400 SHEET 8 AA2 9 ILE B 446 VAL B 449 1 O ILE B 448 N THR B 416 SHEET 9 AA2 9 LEU B 254 SER B 257 1 N CYS B 255 O ILE B 447 LINK C LYS A 303 N CSS A 304 1555 1555 1.33 LINK C CSS A 304 N HIS A 305 1555 1555 1.33 LINK C LYS B 303 N CSS B 304 1555 1555 1.34 LINK C CSS B 304 N HIS B 305 1555 1555 1.34 CRYST1 70.140 61.830 71.390 90.00 115.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014257 0.000000 0.006660 0.00000 SCALE2 0.000000 0.016173 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015461 0.00000 CONECT 1296 1316 CONECT 1316 1296 1317 1323 CONECT 1317 1316 1318 1321 1324 CONECT 1318 1317 1319 1325 1326 CONECT 1319 1318 1320 CONECT 1320 1319 1327 CONECT 1321 1317 1322 1328 CONECT 1322 1321 CONECT 1323 1316 CONECT 1324 1317 CONECT 1325 1318 CONECT 1326 1318 CONECT 1327 1320 CONECT 1328 1321 CONECT 5299 5319 CONECT 5319 5299 5320 5326 CONECT 5320 5319 5321 5324 5327 CONECT 5321 5320 5322 5328 5329 CONECT 5322 5321 5323 CONECT 5323 5322 5330 CONECT 5324 5320 5325 5331 CONECT 5325 5324 CONECT 5326 5319 CONECT 5327 5320 CONECT 5328 5321 CONECT 5329 5321 CONECT 5330 5323 CONECT 5331 5324 CONECT 7918 7920 7928 7934 CONECT 7919 7921 7929 7935 CONECT 7920 7918 7922 7930 CONECT 7921 7919 7923 7931 CONECT 7922 7920 7924 7960 CONECT 7923 7921 7925 7961 CONECT 7924 7922 7926 7932 CONECT 7925 7923 7927 7933 CONECT 7926 7924 7928 7962 CONECT 7927 7925 7929 7963 CONECT 7928 7918 7926 7964 CONECT 7929 7919 7927 7965 CONECT 7930 7920 CONECT 7931 7921 CONECT 7932 7924 CONECT 7933 7925 CONECT 7934 7918 7936 7946 7966 CONECT 7935 7919 7937 7947 7967 CONECT 7936 7934 7938 7940 7968 CONECT 7937 7935 7939 7941 7969 CONECT 7938 7936 7970 CONECT 7939 7937 7971 CONECT 7940 7936 7942 7944 7972 CONECT 7941 7937 7943 7945 7973 CONECT 7942 7940 7946 7948 7974 CONECT 7943 7941 7947 7949 7975 CONECT 7944 7940 7976 CONECT 7945 7941 7977 CONECT 7946 7934 7942 CONECT 7947 7935 7943 CONECT 7948 7942 7950 7978 7980 CONECT 7949 7943 7951 7979 7981 CONECT 7950 7948 7952 CONECT 7951 7949 7953 CONECT 7952 7950 7954 7956 7958 CONECT 7953 7951 7955 7957 7959 CONECT 7954 7952 CONECT 7955 7953 CONECT 7956 7952 CONECT 7957 7953 CONECT 7958 7952 CONECT 7959 7953 CONECT 7960 7922 CONECT 7961 7923 CONECT 7962 7926 CONECT 7963 7927 CONECT 7964 7928 CONECT 7965 7929 CONECT 7966 7934 CONECT 7967 7935 CONECT 7968 7936 CONECT 7969 7937 CONECT 7970 7938 CONECT 7971 7939 CONECT 7972 7940 CONECT 7973 7941 CONECT 7974 7942 CONECT 7975 7943 CONECT 7976 7944 CONECT 7977 7945 CONECT 7978 7948 CONECT 7979 7949 CONECT 7980 7948 CONECT 7981 7949 CONECT 7982 7984 7992 7998 CONECT 7983 7985 7993 7999 CONECT 7984 7982 7986 7994 CONECT 7985 7983 7987 7995 CONECT 7986 7984 7988 8024 CONECT 7987 7985 7989 8025 CONECT 7988 7986 7990 7996 CONECT 7989 7987 7991 7997 CONECT 7990 7988 7992 8026 CONECT 7991 7989 7993 8027 CONECT 7992 7982 7990 8028 CONECT 7993 7983 7991 8029 CONECT 7994 7984 CONECT 7995 7985 CONECT 7996 7988 CONECT 7997 7989 CONECT 7998 7982 8000 8010 8030 CONECT 7999 7983 8001 8011 8031 CONECT 8000 7998 8002 8004 8032 CONECT 8001 7999 8003 8005 8033 CONECT 8002 8000 8034 CONECT 8003 8001 8035 CONECT 8004 8000 8006 8008 8036 CONECT 8005 8001 8007 8009 8037 CONECT 8006 8004 8010 8012 8038 CONECT 8007 8005 8011 8013 8039 CONECT 8008 8004 8040 CONECT 8009 8005 8041 CONECT 8010 7998 8006 CONECT 8011 7999 8007 CONECT 8012 8006 8014 8042 8044 CONECT 8013 8007 8015 8043 8045 CONECT 8014 8012 8016 CONECT 8015 8013 8017 CONECT 8016 8014 8018 8020 8022 CONECT 8017 8015 8019 8021 8023 CONECT 8018 8016 CONECT 8019 8017 CONECT 8020 8016 CONECT 8021 8017 CONECT 8022 8016 CONECT 8023 8017 CONECT 8024 7986 CONECT 8025 7987 CONECT 8026 7990 CONECT 8027 7991 CONECT 8028 7992 CONECT 8029 7993 CONECT 8030 7998 CONECT 8031 7999 CONECT 8032 8000 CONECT 8033 8001 CONECT 8034 8002 CONECT 8035 8003 CONECT 8036 8004 CONECT 8037 8005 CONECT 8038 8006 CONECT 8039 8007 CONECT 8040 8008 CONECT 8041 8009 CONECT 8042 8012 CONECT 8043 8013 CONECT 8044 8012 CONECT 8045 8013 MASTER 365 0 4 26 18 0 0 6 4172 2 156 40 END