HEADER TRANSFERASE 19-DEC-24 9HSK TITLE CRYSTAL STRUCTURE OF C-TERMINAL CATALYTIC DOMAIN OF PLASMODIUM TITLE 2 FALCIPARUM CTP:PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE WITH PYRIDIN-2-OL COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.15; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: DELETION OF A LYSINE RICH LOOP (720 - 737) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 4 ORGANISM_TAXID: 5833; SOURCE 5 GENE: PF3D7_1316600; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TRANSFERASE, CCT EXPDTA X-RAY DIFFRACTION AUTHOR S.AUDEBERT,M.GELIN,J.-F.GUICHOU REVDAT 1 05-FEB-25 9HSK 0 JRNL AUTH S.AUDEBERT,M.GELIN,J.-F.GUICHOU JRNL TITL CRYSTAL STRUCTURE OF C-TERMINAL CATALYTIC DOMAIN OF JRNL TITL 2 PLASMODIUM FALCIPARUM CTP:PHOSPHOCHOLINE JRNL TITL 3 CYTIDYLYLTRANSFERASE WITH PYRIDIN-2-OL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 3 NUMBER OF REFLECTIONS : 18742 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.5600 - 4.1100 0.88 2501 151 0.1910 0.1977 REMARK 3 2 4.1100 - 3.2600 0.89 2502 158 0.2002 0.3107 REMARK 3 3 3.2600 - 2.8500 0.91 2586 155 0.2529 0.2804 REMARK 3 4 2.8500 - 2.5900 0.85 2421 127 0.2916 0.3097 REMARK 3 5 2.5900 - 2.4100 0.91 2576 127 0.3017 0.3046 REMARK 3 6 2.4100 - 2.2600 0.88 2531 135 0.3322 0.3546 REMARK 3 7 2.2600 - 2.1500 0.91 2642 130 0.3378 0.3547 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.373 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.803 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1030 REMARK 3 ANGLE : 0.786 1396 REMARK 3 CHIRALITY : 0.052 161 REMARK 3 PLANARITY : 0.005 175 REMARK 3 DIHEDRAL : 12.545 358 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 616 THROUGH 642 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6424 -25.7177 -23.6359 REMARK 3 T TENSOR REMARK 3 T11: 0.3712 T22: 0.5086 REMARK 3 T33: 0.4324 T12: 0.0173 REMARK 3 T13: 0.0848 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 5.5016 L22: 4.8212 REMARK 3 L33: 0.9211 L12: -1.0650 REMARK 3 L13: 1.9428 L23: -0.0430 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: -0.2189 S13: 0.2027 REMARK 3 S21: 0.3628 S22: 0.0021 S23: 0.3816 REMARK 3 S31: 0.0697 S32: -0.2984 S33: 0.0570 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 643 THROUGH 706 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0118 -18.8361 -23.6121 REMARK 3 T TENSOR REMARK 3 T11: 0.3026 T22: 0.2706 REMARK 3 T33: 0.3248 T12: -0.0195 REMARK 3 T13: 0.0234 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 6.1976 L22: 4.7806 REMARK 3 L33: 4.3365 L12: -0.6572 REMARK 3 L13: 1.1588 L23: -1.1584 REMARK 3 S TENSOR REMARK 3 S11: -0.1050 S12: -0.1028 S13: 0.5522 REMARK 3 S21: 0.1931 S22: -0.0529 S23: -0.0079 REMARK 3 S31: -0.4599 S32: 0.0885 S33: 0.1576 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 707 THROUGH 741 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3067 -15.8114 -20.5478 REMARK 3 T TENSOR REMARK 3 T11: 0.7419 T22: 0.6801 REMARK 3 T33: 0.3918 T12: 0.0021 REMARK 3 T13: -0.0869 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 8.9857 L22: 2.9353 REMARK 3 L33: 0.0284 L12: -4.7011 REMARK 3 L13: -0.5211 L23: 0.2593 REMARK 3 S TENSOR REMARK 3 S11: -0.4944 S12: -2.0334 S13: -0.1019 REMARK 3 S21: 1.0184 S22: 0.1611 S23: -0.5585 REMARK 3 S31: -0.2742 S32: -0.7103 S33: 0.2855 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 742 THROUGH 753 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2131 -13.0361 -27.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.4123 T22: 0.5573 REMARK 3 T33: 0.3733 T12: -0.0710 REMARK 3 T13: 0.0340 T23: -0.0518 REMARK 3 L TENSOR REMARK 3 L11: 7.7244 L22: 1.9741 REMARK 3 L33: 5.2889 L12: -3.3363 REMARK 3 L13: 1.2837 L23: 0.5837 REMARK 3 S TENSOR REMARK 3 S11: -0.1194 S12: 0.4052 S13: 0.1637 REMARK 3 S21: 0.7760 S22: -0.6021 S23: 0.3919 REMARK 3 S31: -0.2880 S32: -0.0252 S33: 0.8806 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 754 THROUGH 760 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8693 -30.3829 -15.1960 REMARK 3 T TENSOR REMARK 3 T11: 1.1373 T22: 0.9239 REMARK 3 T33: 0.9771 T12: -0.9604 REMARK 3 T13: 0.7769 T23: -0.3795 REMARK 3 L TENSOR REMARK 3 L11: 1.9814 L22: 2.2600 REMARK 3 L33: 1.5494 L12: 1.4001 REMARK 3 L13: -0.8529 L23: -1.8280 REMARK 3 S TENSOR REMARK 3 S11: 0.0767 S12: -0.3766 S13: -0.2466 REMARK 3 S21: -0.0090 S22: -0.4168 S23: -0.4131 REMARK 3 S31: 0.0729 S32: 0.1082 S33: 0.0788 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 761 THROUGH 772 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4287 -36.7038 -3.8207 REMARK 3 T TENSOR REMARK 3 T11: 1.1274 T22: 0.7546 REMARK 3 T33: 0.4754 T12: 0.0769 REMARK 3 T13: 0.0529 T23: -0.3187 REMARK 3 L TENSOR REMARK 3 L11: 3.2606 L22: 2.7782 REMARK 3 L33: 1.1712 L12: 2.4015 REMARK 3 L13: 0.9008 L23: 1.5610 REMARK 3 S TENSOR REMARK 3 S11: 0.6191 S12: -0.4903 S13: -0.1437 REMARK 3 S21: 1.3333 S22: -0.4878 S23: 0.1606 REMARK 3 S31: 0.5271 S32: -0.9354 S33: -0.1928 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9HSK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1292144108. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18742 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.088 REMARK 200 RESOLUTION RANGE LOW (A) : 58.731 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.28800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.63300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 11.5%, NAF 210 MM, GLYCEROL REMARK 280 5.8%, MNCL2 15MM, 1,3 PROPANDIOL 3%, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.06100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.94150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.55950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.06100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.94150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.55950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.06100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.94150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.55950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.06100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 33.94150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.55950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -67.88300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 578 REMARK 465 HIS A 579 REMARK 465 MET A 580 REMARK 465 ALA A 581 REMARK 465 VAL A 582 REMARK 465 PRO A 583 REMARK 465 ASP A 584 REMARK 465 ASP A 585 REMARK 465 ASP A 586 REMARK 465 ASP A 587 REMARK 465 ASP A 588 REMARK 465 ASP A 589 REMARK 465 ASP A 590 REMARK 465 ASN A 591 REMARK 465 SER A 592 REMARK 465 ASN A 593 REMARK 465 ASP A 594 REMARK 465 GLU A 595 REMARK 465 SER A 596 REMARK 465 GLU A 597 REMARK 465 TYR A 598 REMARK 465 GLU A 599 REMARK 465 SER A 600 REMARK 465 SER A 601 REMARK 465 GLN A 602 REMARK 465 MET A 603 REMARK 465 ASP A 604 REMARK 465 SER A 605 REMARK 465 GLU A 606 REMARK 465 LYS A 607 REMARK 465 ASN A 608 REMARK 465 LYS A 609 REMARK 465 GLY A 610 REMARK 465 SER A 611 REMARK 465 ILE A 612 REMARK 465 LYS A 613 REMARK 465 ASN A 614 REMARK 465 SER A 615 REMARK 465 PRO A 731 REMARK 465 TYR A 732 REMARK 465 ALA A 733 REMARK 465 ASN A 734 REMARK 465 ASN A 735 REMARK 465 GLN A 736 REMARK 465 LYS A 737 REMARK 465 GLU A 738 REMARK 465 GLU A 757 REMARK 465 TYR A 772 REMARK 465 GLU A 773 REMARK 465 ASP A 774 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 616 CG CD CE NZ REMARK 470 GLU A 645 CG CD OE1 OE2 REMARK 470 LYS A 660 CG CD CE NZ REMARK 470 LEU A 661 CG CD1 CD2 REMARK 470 GLN A 665 CG CD OE1 NE2 REMARK 470 VAL A 666 CG1 CG2 REMARK 470 ILE A 712 CG1 CG2 CD1 REMARK 470 ILE A 740 CG1 CG2 CD1 REMARK 470 ARG A 755 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 759 CG1 CG2 REMARK 470 SER A 760 OG REMARK 470 THR A 761 OG1 CG2 REMARK 470 THR A 762 OG1 CG2 REMARK 470 LEU A 764 CG CD1 CD2 REMARK 470 LEU A 769 CG CD1 CD2 REMARK 470 LYS A 770 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 658 O HOH A 901 1.96 REMARK 500 NZ LYS A 751 O HOH A 902 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 665 -158.69 -154.08 REMARK 500 LEU A 769 13.26 -67.60 REMARK 500 LYS A 770 40.90 -72.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9HSB RELATED DB: PDB DBREF 9HSK A 581 774 UNP Q8IEE9 Q8IEE9_PLAF7 581 774 SEQADV 9HSK GLY A 578 UNP Q8IEE9 EXPRESSION TAG SEQADV 9HSK HIS A 579 UNP Q8IEE9 EXPRESSION TAG SEQADV 9HSK MET A 580 UNP Q8IEE9 EXPRESSION TAG SEQADV 9HSK A UNP Q8IEE9 LYS 720 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 721 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 722 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 723 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 724 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 725 DELETION SEQADV 9HSK A UNP Q8IEE9 SER 726 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 727 DELETION SEQADV 9HSK A UNP Q8IEE9 GLY 728 DELETION SEQADV 9HSK A UNP Q8IEE9 LYS 729 DELETION SEQADV 9HSK A UNP Q8IEE9 SER 730 DELETION SEQADV 9HSK A UNP Q8IEE9 PHE 731 DELETION SEQADV 9HSK A UNP Q8IEE9 SER 732 DELETION SEQADV 9HSK A UNP Q8IEE9 PHE 733 DELETION SEQADV 9HSK A UNP Q8IEE9 ASP 734 DELETION SEQADV 9HSK A UNP Q8IEE9 GLU 735 DELETION SEQADV 9HSK A UNP Q8IEE9 GLU 736 DELETION SEQADV 9HSK A UNP Q8IEE9 ASN 737 DELETION SEQRES 1 A 179 GLY HIS MET ALA VAL PRO ASP ASP ASP ASP ASP ASP ASP SEQRES 2 A 179 ASN SER ASN ASP GLU SER GLU TYR GLU SER SER GLN MET SEQRES 3 A 179 ASP SER GLU LYS ASN LYS GLY SER ILE LYS ASN SER LYS SEQRES 4 A 179 ASN VAL VAL ILE TYR ALA ASP GLY VAL TYR ASP MET LEU SEQRES 5 A 179 HIS LEU GLY HIS MET LYS GLN LEU GLU GLN ALA LYS LYS SEQRES 6 A 179 LEU PHE GLU ASN THR THR LEU ILE VAL GLY VAL THR SER SEQRES 7 A 179 ASP ASN GLU THR LYS LEU PHE LYS GLY GLN VAL VAL GLN SEQRES 8 A 179 THR LEU GLU GLU ARG THR GLU THR LEU LYS HIS ILE ARG SEQRES 9 A 179 TRP VAL ASP GLU ILE ILE SER PRO CYS PRO TRP VAL VAL SEQRES 10 A 179 THR PRO GLU PHE LEU GLU LYS TYR LYS ILE ASP TYR VAL SEQRES 11 A 179 ALA HIS ASP ASP ILE PRO TYR ALA ASN ASN GLN LYS GLU SEQRES 12 A 179 ASP ILE TYR ALA TRP LEU LYS ARG ALA GLY LYS PHE LYS SEQRES 13 A 179 ALA THR GLN ARG THR GLU GLY VAL SER THR THR ASP LEU SEQRES 14 A 179 ILE VAL ARG ILE LEU LYS ASN TYR GLU ASP HET T5Y A 801 12 HETNAM T5Y PYRIDIN-2-OL FORMUL 2 T5Y C5 H5 N O FORMUL 3 HOH *28(H2 O) HELIX 1 AA1 HIS A 630 LYS A 642 1 13 HELIX 2 AA2 SER A 655 LYS A 663 1 9 HELIX 3 AA3 THR A 669 HIS A 679 1 11 HELIX 4 AA4 THR A 695 TYR A 702 1 8 HELIX 5 AA5 TYR A 741 GLY A 748 1 8 HELIX 6 AA6 SER A 760 LEU A 769 1 10 SHEET 1 AA1 5 GLU A 685 CYS A 690 0 SHEET 2 AA1 5 THR A 647 THR A 654 1 N VAL A 651 O ILE A 687 SHEET 3 AA1 5 VAL A 618 GLY A 624 1 N ILE A 620 O ILE A 650 SHEET 4 AA1 5 TYR A 706 HIS A 709 1 O ALA A 708 N TYR A 621 SHEET 5 AA1 5 PHE A 750 ALA A 752 1 O LYS A 751 N VAL A 707 CISPEP 1 SER A 688 PRO A 689 0 3.94 CRYST1 50.122 67.883 117.119 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019951 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014731 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008538 0.00000