data_9I8J # _entry.id 9I8J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9I8J pdb_00009i8j 10.2210/pdb9i8j/pdb WWPDB D_1292144938 ? ? EMDB EMD-52727 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-03 ? 2 'EM metadata' 1 0 2025-12-03 ? 3 'Half map' 1 0 2025-12-03 1 4 'Half map' 1 0 2025-12-03 2 5 Image 1 0 2025-12-03 ? 6 'Primary map' 1 0 2025-12-03 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9I8J _pdbx_database_status.recvd_initial_deposition_date 2025-02-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'AB Spike of RHDV mutant N15' _pdbx_database_related.db_id EMD-52727 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 jrcaston@cnb.csic.es Jose Caston R 'principal investigator/group leader' 0000-0003-2350-9048 3 ga.novoa@cnb.csic.es Guy Novoa ? 'principal investigator/group leader' 0000-0002-3018-9743 4 jm.martinez@cnb.csic.es 'Juan Manuel' Martinez-Romero ? 'principal investigator/group leader' 0000-0002-0370-9440 5 carlos.perez@cnb.csic.es Carlos Perez-Mata ? 'principal investigator/group leader' 0000-0003-3381-7431 6 barcena@inia.csic.es Juan Barcena ? 'principal investigator/group leader' 0000-0001-6050-0654 7 guynovoabenavides@gmail.com Guy Novoa ? 'principal investigator/group leader' 0000-0002-3018-9743 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Novoa, G.' 1 0000-0002-3018-9743 'Martinez-Romero, J.M.' 2 0000-0002-0370-9440 'Perez-Mata, C.' 3 0000-0003-3381-7431 'Barcena, J.' 4 0000-0001-6050-0654 'Caston, J.R.' 5 0000-0003-2350-9048 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'AB Spike of RHDV mutant N15' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Novoa, G.' 1 0000-0002-3018-9743 primary 'Martinez-Romero, J.M.' 2 0000-0002-0370-9440 primary 'Perez-Mata, C.' 3 0000-0003-3381-7431 primary 'Barcena, J.' 4 0000-0001-6050-0654 primary 'Caston, J.R.' 5 0000-0003-2350-9048 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Capsid protein VP60' _entity.formula_weight 35133.914 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KTVDSISPAGLLTTPVLTGVGNDNRWNGQIVGLQPVPGGFSTCNRHWNLNGSTYGWSSPRFADIDHRRGSASYPGNNATN VLQFWYANAGSAIDNPISQVAPDGFPDMSFVPFNGPGIPAAGWVGFGAIWNSNSGAPNVTTVQAYELGFATGAPGNLQPT TNTSGSQTVAKSIYAVVTGTAQNPAGLFVMASGVISTPSANAITYTPQPDRIVTTPGTPAAAPVGKNTPIMFASVVRRTG DVNATAGSANGTQYGTGSQPLPVTIGLSLNNYSSALMPGQFFVWQLTFASGFMEIGLSVDGYFYAGTGASTTLIDLTELI DVRPVGPRPSKSTLVFNLGG ; _entity_poly.pdbx_seq_one_letter_code_can ;KTVDSISPAGLLTTPVLTGVGNDNRWNGQIVGLQPVPGGFSTCNRHWNLNGSTYGWSSPRFADIDHRRGSASYPGNNATN VLQFWYANAGSAIDNPISQVAPDGFPDMSFVPFNGPGIPAAGWVGFGAIWNSNSGAPNVTTVQAYELGFATGAPGNLQPT TNTSGSQTVAKSIYAVVTGTAQNPAGLFVMASGVISTPSANAITYTPQPDRIVTTPGTPAAAPVGKNTPIMFASVVRRTG DVNATAGSANGTQYGTGSQPLPVTIGLSLNNYSSALMPGQFFVWQLTFASGFMEIGLSVDGYFYAGTGASTTLIDLTELI DVRPVGPRPSKSTLVFNLGG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 THR n 1 3 VAL n 1 4 ASP n 1 5 SER n 1 6 ILE n 1 7 SER n 1 8 PRO n 1 9 ALA n 1 10 GLY n 1 11 LEU n 1 12 LEU n 1 13 THR n 1 14 THR n 1 15 PRO n 1 16 VAL n 1 17 LEU n 1 18 THR n 1 19 GLY n 1 20 VAL n 1 21 GLY n 1 22 ASN n 1 23 ASP n 1 24 ASN n 1 25 ARG n 1 26 TRP n 1 27 ASN n 1 28 GLY n 1 29 GLN n 1 30 ILE n 1 31 VAL n 1 32 GLY n 1 33 LEU n 1 34 GLN n 1 35 PRO n 1 36 VAL n 1 37 PRO n 1 38 GLY n 1 39 GLY n 1 40 PHE n 1 41 SER n 1 42 THR n 1 43 CYS n 1 44 ASN n 1 45 ARG n 1 46 HIS n 1 47 TRP n 1 48 ASN n 1 49 LEU n 1 50 ASN n 1 51 GLY n 1 52 SER n 1 53 THR n 1 54 TYR n 1 55 GLY n 1 56 TRP n 1 57 SER n 1 58 SER n 1 59 PRO n 1 60 ARG n 1 61 PHE n 1 62 ALA n 1 63 ASP n 1 64 ILE n 1 65 ASP n 1 66 HIS n 1 67 ARG n 1 68 ARG n 1 69 GLY n 1 70 SER n 1 71 ALA n 1 72 SER n 1 73 TYR n 1 74 PRO n 1 75 GLY n 1 76 ASN n 1 77 ASN n 1 78 ALA n 1 79 THR n 1 80 ASN n 1 81 VAL n 1 82 LEU n 1 83 GLN n 1 84 PHE n 1 85 TRP n 1 86 TYR n 1 87 ALA n 1 88 ASN n 1 89 ALA n 1 90 GLY n 1 91 SER n 1 92 ALA n 1 93 ILE n 1 94 ASP n 1 95 ASN n 1 96 PRO n 1 97 ILE n 1 98 SER n 1 99 GLN n 1 100 VAL n 1 101 ALA n 1 102 PRO n 1 103 ASP n 1 104 GLY n 1 105 PHE n 1 106 PRO n 1 107 ASP n 1 108 MET n 1 109 SER n 1 110 PHE n 1 111 VAL n 1 112 PRO n 1 113 PHE n 1 114 ASN n 1 115 GLY n 1 116 PRO n 1 117 GLY n 1 118 ILE n 1 119 PRO n 1 120 ALA n 1 121 ALA n 1 122 GLY n 1 123 TRP n 1 124 VAL n 1 125 GLY n 1 126 PHE n 1 127 GLY n 1 128 ALA n 1 129 ILE n 1 130 TRP n 1 131 ASN n 1 132 SER n 1 133 ASN n 1 134 SER n 1 135 GLY n 1 136 ALA n 1 137 PRO n 1 138 ASN n 1 139 VAL n 1 140 THR n 1 141 THR n 1 142 VAL n 1 143 GLN n 1 144 ALA n 1 145 TYR n 1 146 GLU n 1 147 LEU n 1 148 GLY n 1 149 PHE n 1 150 ALA n 1 151 THR n 1 152 GLY n 1 153 ALA n 1 154 PRO n 1 155 GLY n 1 156 ASN n 1 157 LEU n 1 158 GLN n 1 159 PRO n 1 160 THR n 1 161 THR n 1 162 ASN n 1 163 THR n 1 164 SER n 1 165 GLY n 1 166 SER n 1 167 GLN n 1 168 THR n 1 169 VAL n 1 170 ALA n 1 171 LYS n 1 172 SER n 1 173 ILE n 1 174 TYR n 1 175 ALA n 1 176 VAL n 1 177 VAL n 1 178 THR n 1 179 GLY n 1 180 THR n 1 181 ALA n 1 182 GLN n 1 183 ASN n 1 184 PRO n 1 185 ALA n 1 186 GLY n 1 187 LEU n 1 188 PHE n 1 189 VAL n 1 190 MET n 1 191 ALA n 1 192 SER n 1 193 GLY n 1 194 VAL n 1 195 ILE n 1 196 SER n 1 197 THR n 1 198 PRO n 1 199 SER n 1 200 ALA n 1 201 ASN n 1 202 ALA n 1 203 ILE n 1 204 THR n 1 205 TYR n 1 206 THR n 1 207 PRO n 1 208 GLN n 1 209 PRO n 1 210 ASP n 1 211 ARG n 1 212 ILE n 1 213 VAL n 1 214 THR n 1 215 THR n 1 216 PRO n 1 217 GLY n 1 218 THR n 1 219 PRO n 1 220 ALA n 1 221 ALA n 1 222 ALA n 1 223 PRO n 1 224 VAL n 1 225 GLY n 1 226 LYS n 1 227 ASN n 1 228 THR n 1 229 PRO n 1 230 ILE n 1 231 MET n 1 232 PHE n 1 233 ALA n 1 234 SER n 1 235 VAL n 1 236 VAL n 1 237 ARG n 1 238 ARG n 1 239 THR n 1 240 GLY n 1 241 ASP n 1 242 VAL n 1 243 ASN n 1 244 ALA n 1 245 THR n 1 246 ALA n 1 247 GLY n 1 248 SER n 1 249 ALA n 1 250 ASN n 1 251 GLY n 1 252 THR n 1 253 GLN n 1 254 TYR n 1 255 GLY n 1 256 THR n 1 257 GLY n 1 258 SER n 1 259 GLN n 1 260 PRO n 1 261 LEU n 1 262 PRO n 1 263 VAL n 1 264 THR n 1 265 ILE n 1 266 GLY n 1 267 LEU n 1 268 SER n 1 269 LEU n 1 270 ASN n 1 271 ASN n 1 272 TYR n 1 273 SER n 1 274 SER n 1 275 ALA n 1 276 LEU n 1 277 MET n 1 278 PRO n 1 279 GLY n 1 280 GLN n 1 281 PHE n 1 282 PHE n 1 283 VAL n 1 284 TRP n 1 285 GLN n 1 286 LEU n 1 287 THR n 1 288 PHE n 1 289 ALA n 1 290 SER n 1 291 GLY n 1 292 PHE n 1 293 MET n 1 294 GLU n 1 295 ILE n 1 296 GLY n 1 297 LEU n 1 298 SER n 1 299 VAL n 1 300 ASP n 1 301 GLY n 1 302 TYR n 1 303 PHE n 1 304 TYR n 1 305 ALA n 1 306 GLY n 1 307 THR n 1 308 GLY n 1 309 ALA n 1 310 SER n 1 311 THR n 1 312 THR n 1 313 LEU n 1 314 ILE n 1 315 ASP n 1 316 LEU n 1 317 THR n 1 318 GLU n 1 319 LEU n 1 320 ILE n 1 321 ASP n 1 322 VAL n 1 323 ARG n 1 324 PRO n 1 325 VAL n 1 326 GLY n 1 327 PRO n 1 328 ARG n 1 329 PRO n 1 330 SER n 1 331 LYS n 1 332 SER n 1 333 THR n 1 334 LEU n 1 335 VAL n 1 336 PHE n 1 337 ASN n 1 338 LEU n 1 339 GLY n 1 340 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 340 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rabbit hemorrhagic disease virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11976 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 232 232 LYS LYS A . n A 1 2 THR 2 233 233 THR THR A . n A 1 3 VAL 3 234 234 VAL VAL A . n A 1 4 ASP 4 235 235 ASP ASP A . n A 1 5 SER 5 236 236 SER SER A . n A 1 6 ILE 6 237 237 ILE ILE A . n A 1 7 SER 7 238 238 SER SER A . n A 1 8 PRO 8 239 239 PRO PRO A . n A 1 9 ALA 9 240 240 ALA ALA A . n A 1 10 GLY 10 241 241 GLY GLY A . n A 1 11 LEU 11 242 242 LEU LEU A . n A 1 12 LEU 12 243 243 LEU LEU A . n A 1 13 THR 13 244 244 THR THR A . n A 1 14 THR 14 245 245 THR THR A . n A 1 15 PRO 15 246 246 PRO PRO A . n A 1 16 VAL 16 247 247 VAL VAL A . n A 1 17 LEU 17 248 248 LEU LEU A . n A 1 18 THR 18 249 249 THR THR A . n A 1 19 GLY 19 250 250 GLY GLY A . n A 1 20 VAL 20 251 251 VAL VAL A . n A 1 21 GLY 21 252 252 GLY GLY A . n A 1 22 ASN 22 253 253 ASN ASN A . n A 1 23 ASP 23 254 254 ASP ASP A . n A 1 24 ASN 24 255 255 ASN ASN A . n A 1 25 ARG 25 256 256 ARG ARG A . n A 1 26 TRP 26 257 257 TRP TRP A . n A 1 27 ASN 27 258 258 ASN ASN A . n A 1 28 GLY 28 259 259 GLY GLY A . n A 1 29 GLN 29 260 260 GLN GLN A . n A 1 30 ILE 30 261 261 ILE ILE A . n A 1 31 VAL 31 262 262 VAL VAL A . n A 1 32 GLY 32 263 263 GLY GLY A . n A 1 33 LEU 33 264 264 LEU LEU A . n A 1 34 GLN 34 265 265 GLN GLN A . n A 1 35 PRO 35 266 266 PRO PRO A . n A 1 36 VAL 36 267 267 VAL VAL A . n A 1 37 PRO 37 268 268 PRO PRO A . n A 1 38 GLY 38 269 269 GLY GLY A . n A 1 39 GLY 39 270 270 GLY GLY A . n A 1 40 PHE 40 271 271 PHE PHE A . n A 1 41 SER 41 272 272 SER SER A . n A 1 42 THR 42 273 273 THR THR A . n A 1 43 CYS 43 274 274 CYS CYS A . n A 1 44 ASN 44 275 275 ASN ASN A . n A 1 45 ARG 45 276 276 ARG ARG A . n A 1 46 HIS 46 277 277 HIS HIS A . n A 1 47 TRP 47 278 278 TRP TRP A . n A 1 48 ASN 48 279 279 ASN ASN A . n A 1 49 LEU 49 280 280 LEU LEU A . n A 1 50 ASN 50 281 281 ASN ASN A . n A 1 51 GLY 51 282 282 GLY GLY A . n A 1 52 SER 52 283 283 SER SER A . n A 1 53 THR 53 284 284 THR THR A . n A 1 54 TYR 54 285 285 TYR TYR A . n A 1 55 GLY 55 286 286 GLY GLY A . n A 1 56 TRP 56 287 287 TRP TRP A . n A 1 57 SER 57 288 288 SER SER A . n A 1 58 SER 58 289 289 SER SER A . n A 1 59 PRO 59 290 290 PRO PRO A . n A 1 60 ARG 60 291 291 ARG ARG A . n A 1 61 PHE 61 292 292 PHE PHE A . n A 1 62 ALA 62 293 293 ALA ALA A . n A 1 63 ASP 63 294 294 ASP ASP A . n A 1 64 ILE 64 295 295 ILE ILE A . n A 1 65 ASP 65 296 296 ASP ASP A . n A 1 66 HIS 66 297 297 HIS HIS A . n A 1 67 ARG 67 298 298 ARG ARG A . n A 1 68 ARG 68 299 299 ARG ARG A . n A 1 69 GLY 69 300 300 GLY GLY A . n A 1 70 SER 70 301 301 SER SER A . n A 1 71 ALA 71 302 302 ALA ALA A . n A 1 72 SER 72 303 303 SER SER A . n A 1 73 TYR 73 304 304 TYR TYR A . n A 1 74 PRO 74 305 305 PRO PRO A . n A 1 75 GLY 75 306 306 GLY GLY A . n A 1 76 ASN 76 307 307 ASN ASN A . n A 1 77 ASN 77 308 308 ASN ASN A . n A 1 78 ALA 78 309 309 ALA ALA A . n A 1 79 THR 79 310 310 THR THR A . n A 1 80 ASN 80 311 311 ASN ASN A . n A 1 81 VAL 81 312 312 VAL VAL A . n A 1 82 LEU 82 313 313 LEU LEU A . n A 1 83 GLN 83 314 314 GLN GLN A . n A 1 84 PHE 84 315 315 PHE PHE A . n A 1 85 TRP 85 316 316 TRP TRP A . n A 1 86 TYR 86 317 317 TYR TYR A . n A 1 87 ALA 87 318 318 ALA ALA A . n A 1 88 ASN 88 319 319 ASN ASN A . n A 1 89 ALA 89 320 320 ALA ALA A . n A 1 90 GLY 90 321 321 GLY GLY A . n A 1 91 SER 91 322 322 SER SER A . n A 1 92 ALA 92 323 323 ALA ALA A . n A 1 93 ILE 93 324 324 ILE ILE A . n A 1 94 ASP 94 325 325 ASP ASP A . n A 1 95 ASN 95 326 326 ASN ASN A . n A 1 96 PRO 96 327 327 PRO PRO A . n A 1 97 ILE 97 328 328 ILE ILE A . n A 1 98 SER 98 329 329 SER SER A . n A 1 99 GLN 99 330 330 GLN GLN A . n A 1 100 VAL 100 331 331 VAL VAL A . n A 1 101 ALA 101 332 332 ALA ALA A . n A 1 102 PRO 102 333 333 PRO PRO A . n A 1 103 ASP 103 334 334 ASP ASP A . n A 1 104 GLY 104 335 335 GLY GLY A . n A 1 105 PHE 105 336 336 PHE PHE A . n A 1 106 PRO 106 337 337 PRO PRO A . n A 1 107 ASP 107 338 338 ASP ASP A . n A 1 108 MET 108 339 339 MET MET A . n A 1 109 SER 109 340 340 SER SER A . n A 1 110 PHE 110 341 341 PHE PHE A . n A 1 111 VAL 111 342 342 VAL VAL A . n A 1 112 PRO 112 343 343 PRO PRO A . n A 1 113 PHE 113 344 344 PHE PHE A . n A 1 114 ASN 114 345 345 ASN ASN A . n A 1 115 GLY 115 346 346 GLY GLY A . n A 1 116 PRO 116 347 347 PRO PRO A . n A 1 117 GLY 117 348 348 GLY GLY A . n A 1 118 ILE 118 349 349 ILE ILE A . n A 1 119 PRO 119 350 350 PRO PRO A . n A 1 120 ALA 120 351 351 ALA ALA A . n A 1 121 ALA 121 352 352 ALA ALA A . n A 1 122 GLY 122 353 353 GLY GLY A . n A 1 123 TRP 123 354 354 TRP TRP A . n A 1 124 VAL 124 355 355 VAL VAL A . n A 1 125 GLY 125 356 356 GLY GLY A . n A 1 126 PHE 126 357 357 PHE PHE A . n A 1 127 GLY 127 358 358 GLY GLY A . n A 1 128 ALA 128 359 359 ALA ALA A . n A 1 129 ILE 129 360 360 ILE ILE A . n A 1 130 TRP 130 361 361 TRP TRP A . n A 1 131 ASN 131 362 362 ASN ASN A . n A 1 132 SER 132 363 363 SER SER A . n A 1 133 ASN 133 364 364 ASN ASN A . n A 1 134 SER 134 365 365 SER SER A . n A 1 135 GLY 135 366 366 GLY GLY A . n A 1 136 ALA 136 367 367 ALA ALA A . n A 1 137 PRO 137 368 368 PRO PRO A . n A 1 138 ASN 138 369 369 ASN ASN A . n A 1 139 VAL 139 370 370 VAL VAL A . n A 1 140 THR 140 371 371 THR THR A . n A 1 141 THR 141 372 372 THR THR A . n A 1 142 VAL 142 373 373 VAL VAL A . n A 1 143 GLN 143 374 374 GLN GLN A . n A 1 144 ALA 144 375 375 ALA ALA A . n A 1 145 TYR 145 376 376 TYR TYR A . n A 1 146 GLU 146 377 377 GLU GLU A . n A 1 147 LEU 147 378 378 LEU LEU A . n A 1 148 GLY 148 379 379 GLY GLY A . n A 1 149 PHE 149 380 380 PHE PHE A . n A 1 150 ALA 150 381 381 ALA ALA A . n A 1 151 THR 151 382 382 THR THR A . n A 1 152 GLY 152 383 383 GLY GLY A . n A 1 153 ALA 153 384 384 ALA ALA A . n A 1 154 PRO 154 385 385 PRO PRO A . n A 1 155 GLY 155 386 386 GLY GLY A . n A 1 156 ASN 156 387 387 ASN ASN A . n A 1 157 LEU 157 388 388 LEU LEU A . n A 1 158 GLN 158 389 389 GLN GLN A . n A 1 159 PRO 159 390 390 PRO PRO A . n A 1 160 THR 160 391 391 THR THR A . n A 1 161 THR 161 392 392 THR THR A . n A 1 162 ASN 162 393 393 ASN ASN A . n A 1 163 THR 163 394 394 THR THR A . n A 1 164 SER 164 395 395 SER SER A . n A 1 165 GLY 165 396 396 GLY GLY A . n A 1 166 SER 166 397 397 SER SER A . n A 1 167 GLN 167 398 398 GLN GLN A . n A 1 168 THR 168 399 399 THR THR A . n A 1 169 VAL 169 400 400 VAL VAL A . n A 1 170 ALA 170 401 401 ALA ALA A . n A 1 171 LYS 171 402 402 LYS LYS A . n A 1 172 SER 172 403 403 SER SER A . n A 1 173 ILE 173 404 404 ILE ILE A . n A 1 174 TYR 174 405 405 TYR TYR A . n A 1 175 ALA 175 406 406 ALA ALA A . n A 1 176 VAL 176 407 407 VAL VAL A . n A 1 177 VAL 177 408 408 VAL VAL A . n A 1 178 THR 178 409 409 THR THR A . n A 1 179 GLY 179 410 410 GLY GLY A . n A 1 180 THR 180 411 411 THR THR A . n A 1 181 ALA 181 412 412 ALA ALA A . n A 1 182 GLN 182 413 413 GLN GLN A . n A 1 183 ASN 183 414 414 ASN ASN A . n A 1 184 PRO 184 415 415 PRO PRO A . n A 1 185 ALA 185 416 416 ALA ALA A . n A 1 186 GLY 186 417 417 GLY GLY A . n A 1 187 LEU 187 418 418 LEU LEU A . n A 1 188 PHE 188 419 419 PHE PHE A . n A 1 189 VAL 189 420 420 VAL VAL A . n A 1 190 MET 190 421 421 MET MET A . n A 1 191 ALA 191 422 422 ALA ALA A . n A 1 192 SER 192 423 423 SER SER A . n A 1 193 GLY 193 424 424 GLY GLY A . n A 1 194 VAL 194 425 425 VAL VAL A . n A 1 195 ILE 195 426 426 ILE ILE A . n A 1 196 SER 196 427 427 SER SER A . n A 1 197 THR 197 428 428 THR THR A . n A 1 198 PRO 198 429 429 PRO PRO A . n A 1 199 SER 199 430 430 SER SER A . n A 1 200 ALA 200 431 431 ALA ALA A . n A 1 201 ASN 201 432 432 ASN ASN A . n A 1 202 ALA 202 433 433 ALA ALA A . n A 1 203 ILE 203 434 434 ILE ILE A . n A 1 204 THR 204 435 435 THR THR A . n A 1 205 TYR 205 436 436 TYR TYR A . n A 1 206 THR 206 437 437 THR THR A . n A 1 207 PRO 207 438 438 PRO PRO A . n A 1 208 GLN 208 439 439 GLN GLN A . n A 1 209 PRO 209 440 440 PRO PRO A . n A 1 210 ASP 210 441 441 ASP ASP A . n A 1 211 ARG 211 442 442 ARG ARG A . n A 1 212 ILE 212 443 443 ILE ILE A . n A 1 213 VAL 213 444 444 VAL VAL A . n A 1 214 THR 214 445 445 THR THR A . n A 1 215 THR 215 446 446 THR THR A . n A 1 216 PRO 216 447 447 PRO PRO A . n A 1 217 GLY 217 448 448 GLY GLY A . n A 1 218 THR 218 449 449 THR THR A . n A 1 219 PRO 219 450 450 PRO PRO A . n A 1 220 ALA 220 451 451 ALA ALA A . n A 1 221 ALA 221 452 452 ALA ALA A . n A 1 222 ALA 222 453 453 ALA ALA A . n A 1 223 PRO 223 454 454 PRO PRO A . n A 1 224 VAL 224 455 455 VAL VAL A . n A 1 225 GLY 225 456 456 GLY GLY A . n A 1 226 LYS 226 457 457 LYS LYS A . n A 1 227 ASN 227 458 458 ASN ASN A . n A 1 228 THR 228 459 459 THR THR A . n A 1 229 PRO 229 460 460 PRO PRO A . n A 1 230 ILE 230 461 461 ILE ILE A . n A 1 231 MET 231 462 462 MET MET A . n A 1 232 PHE 232 463 463 PHE PHE A . n A 1 233 ALA 233 464 464 ALA ALA A . n A 1 234 SER 234 465 465 SER SER A . n A 1 235 VAL 235 466 466 VAL VAL A . n A 1 236 VAL 236 467 467 VAL VAL A . n A 1 237 ARG 237 468 468 ARG ARG A . n A 1 238 ARG 238 469 469 ARG ARG A . n A 1 239 THR 239 470 470 THR THR A . n A 1 240 GLY 240 471 471 GLY GLY A . n A 1 241 ASP 241 472 472 ASP ASP A . n A 1 242 VAL 242 473 473 VAL VAL A . n A 1 243 ASN 243 474 474 ASN ASN A . n A 1 244 ALA 244 475 475 ALA ALA A . n A 1 245 THR 245 476 476 THR THR A . n A 1 246 ALA 246 477 477 ALA ALA A . n A 1 247 GLY 247 478 478 GLY GLY A . n A 1 248 SER 248 479 479 SER SER A . n A 1 249 ALA 249 480 480 ALA ALA A . n A 1 250 ASN 250 481 481 ASN ASN A . n A 1 251 GLY 251 482 482 GLY GLY A . n A 1 252 THR 252 483 483 THR THR A . n A 1 253 GLN 253 484 484 GLN GLN A . n A 1 254 TYR 254 485 485 TYR TYR A . n A 1 255 GLY 255 486 486 GLY GLY A . n A 1 256 THR 256 487 487 THR THR A . n A 1 257 GLY 257 488 488 GLY GLY A . n A 1 258 SER 258 489 489 SER SER A . n A 1 259 GLN 259 490 490 GLN GLN A . n A 1 260 PRO 260 491 491 PRO PRO A . n A 1 261 LEU 261 492 492 LEU LEU A . n A 1 262 PRO 262 493 493 PRO PRO A . n A 1 263 VAL 263 494 494 VAL VAL A . n A 1 264 THR 264 495 495 THR THR A . n A 1 265 ILE 265 496 496 ILE ILE A . n A 1 266 GLY 266 497 497 GLY GLY A . n A 1 267 LEU 267 498 498 LEU LEU A . n A 1 268 SER 268 499 499 SER SER A . n A 1 269 LEU 269 500 500 LEU LEU A . n A 1 270 ASN 270 501 501 ASN ASN A . n A 1 271 ASN 271 502 502 ASN ASN A . n A 1 272 TYR 272 503 503 TYR TYR A . n A 1 273 SER 273 504 504 SER SER A . n A 1 274 SER 274 505 505 SER SER A . n A 1 275 ALA 275 506 506 ALA ALA A . n A 1 276 LEU 276 507 507 LEU LEU A . n A 1 277 MET 277 508 508 MET MET A . n A 1 278 PRO 278 509 509 PRO PRO A . n A 1 279 GLY 279 510 510 GLY GLY A . n A 1 280 GLN 280 511 511 GLN GLN A . n A 1 281 PHE 281 512 512 PHE PHE A . n A 1 282 PHE 282 513 513 PHE PHE A . n A 1 283 VAL 283 514 514 VAL VAL A . n A 1 284 TRP 284 515 515 TRP TRP A . n A 1 285 GLN 285 516 516 GLN GLN A . n A 1 286 LEU 286 517 517 LEU LEU A . n A 1 287 THR 287 518 518 THR THR A . n A 1 288 PHE 288 519 519 PHE PHE A . n A 1 289 ALA 289 520 520 ALA ALA A . n A 1 290 SER 290 521 521 SER SER A . n A 1 291 GLY 291 522 522 GLY GLY A . n A 1 292 PHE 292 523 523 PHE PHE A . n A 1 293 MET 293 524 524 MET MET A . n A 1 294 GLU 294 525 525 GLU GLU A . n A 1 295 ILE 295 526 526 ILE ILE A . n A 1 296 GLY 296 527 527 GLY GLY A . n A 1 297 LEU 297 528 528 LEU LEU A . n A 1 298 SER 298 529 529 SER SER A . n A 1 299 VAL 299 530 530 VAL VAL A . n A 1 300 ASP 300 531 531 ASP ASP A . n A 1 301 GLY 301 532 532 GLY GLY A . n A 1 302 TYR 302 533 533 TYR TYR A . n A 1 303 PHE 303 534 534 PHE PHE A . n A 1 304 TYR 304 535 535 TYR TYR A . n A 1 305 ALA 305 536 536 ALA ALA A . n A 1 306 GLY 306 537 537 GLY GLY A . n A 1 307 THR 307 538 538 THR THR A . n A 1 308 GLY 308 539 539 GLY GLY A . n A 1 309 ALA 309 540 540 ALA ALA A . n A 1 310 SER 310 541 541 SER SER A . n A 1 311 THR 311 542 542 THR THR A . n A 1 312 THR 312 543 543 THR THR A . n A 1 313 LEU 313 544 544 LEU LEU A . n A 1 314 ILE 314 545 545 ILE ILE A . n A 1 315 ASP 315 546 546 ASP ASP A . n A 1 316 LEU 316 547 547 LEU LEU A . n A 1 317 THR 317 548 548 THR THR A . n A 1 318 GLU 318 549 549 GLU GLU A . n A 1 319 LEU 319 550 550 LEU LEU A . n A 1 320 ILE 320 551 551 ILE ILE A . n A 1 321 ASP 321 552 552 ASP ASP A . n A 1 322 VAL 322 553 553 VAL VAL A . n A 1 323 ARG 323 554 554 ARG ARG A . n A 1 324 PRO 324 555 555 PRO PRO A . n A 1 325 VAL 325 556 556 VAL VAL A . n A 1 326 GLY 326 557 557 GLY GLY A . n A 1 327 PRO 327 558 558 PRO PRO A . n A 1 328 ARG 328 559 559 ARG ARG A . n A 1 329 PRO 329 560 560 PRO PRO A . n A 1 330 SER 330 561 561 SER SER A . n A 1 331 LYS 331 562 562 LYS LYS A . n A 1 332 SER 332 563 563 SER SER A . n A 1 333 THR 333 564 564 THR THR A . n A 1 334 LEU 334 565 565 LEU LEU A . n A 1 335 VAL 335 566 566 VAL VAL A . n A 1 336 PHE 336 567 567 PHE PHE A . n A 1 337 ASN 337 568 568 ASN ASN A . n A 1 338 LEU 338 569 569 LEU LEU A . n A 1 339 GLY 339 570 570 GLY GLY A . n A 1 340 GLY 340 571 571 GLY GLY A . n B 1 1 LYS 1 232 232 LYS LYS B . n B 1 2 THR 2 233 233 THR THR B . n B 1 3 VAL 3 234 234 VAL VAL B . n B 1 4 ASP 4 235 235 ASP ASP B . n B 1 5 SER 5 236 236 SER SER B . n B 1 6 ILE 6 237 237 ILE ILE B . n B 1 7 SER 7 238 238 SER SER B . n B 1 8 PRO 8 239 239 PRO PRO B . n B 1 9 ALA 9 240 240 ALA ALA B . n B 1 10 GLY 10 241 241 GLY GLY B . n B 1 11 LEU 11 242 242 LEU LEU B . n B 1 12 LEU 12 243 243 LEU LEU B . n B 1 13 THR 13 244 244 THR THR B . n B 1 14 THR 14 245 245 THR THR B . n B 1 15 PRO 15 246 246 PRO PRO B . n B 1 16 VAL 16 247 247 VAL VAL B . n B 1 17 LEU 17 248 248 LEU LEU B . n B 1 18 THR 18 249 249 THR THR B . n B 1 19 GLY 19 250 250 GLY GLY B . n B 1 20 VAL 20 251 251 VAL VAL B . n B 1 21 GLY 21 252 252 GLY GLY B . n B 1 22 ASN 22 253 253 ASN ASN B . n B 1 23 ASP 23 254 254 ASP ASP B . n B 1 24 ASN 24 255 255 ASN ASN B . n B 1 25 ARG 25 256 256 ARG ARG B . n B 1 26 TRP 26 257 257 TRP TRP B . n B 1 27 ASN 27 258 258 ASN ASN B . n B 1 28 GLY 28 259 259 GLY GLY B . n B 1 29 GLN 29 260 260 GLN GLN B . n B 1 30 ILE 30 261 261 ILE ILE B . n B 1 31 VAL 31 262 262 VAL VAL B . n B 1 32 GLY 32 263 263 GLY GLY B . n B 1 33 LEU 33 264 264 LEU LEU B . n B 1 34 GLN 34 265 265 GLN GLN B . n B 1 35 PRO 35 266 266 PRO PRO B . n B 1 36 VAL 36 267 267 VAL VAL B . n B 1 37 PRO 37 268 268 PRO PRO B . n B 1 38 GLY 38 269 269 GLY GLY B . n B 1 39 GLY 39 270 270 GLY GLY B . n B 1 40 PHE 40 271 271 PHE PHE B . n B 1 41 SER 41 272 272 SER SER B . n B 1 42 THR 42 273 273 THR THR B . n B 1 43 CYS 43 274 274 CYS CYS B . n B 1 44 ASN 44 275 275 ASN ASN B . n B 1 45 ARG 45 276 276 ARG ARG B . n B 1 46 HIS 46 277 277 HIS HIS B . n B 1 47 TRP 47 278 278 TRP TRP B . n B 1 48 ASN 48 279 279 ASN ASN B . n B 1 49 LEU 49 280 280 LEU LEU B . n B 1 50 ASN 50 281 281 ASN ASN B . n B 1 51 GLY 51 282 282 GLY GLY B . n B 1 52 SER 52 283 283 SER SER B . n B 1 53 THR 53 284 284 THR THR B . n B 1 54 TYR 54 285 285 TYR TYR B . n B 1 55 GLY 55 286 286 GLY GLY B . n B 1 56 TRP 56 287 287 TRP TRP B . n B 1 57 SER 57 288 288 SER SER B . n B 1 58 SER 58 289 289 SER SER B . n B 1 59 PRO 59 290 290 PRO PRO B . n B 1 60 ARG 60 291 291 ARG ARG B . n B 1 61 PHE 61 292 292 PHE PHE B . n B 1 62 ALA 62 293 293 ALA ALA B . n B 1 63 ASP 63 294 294 ASP ASP B . n B 1 64 ILE 64 295 295 ILE ILE B . n B 1 65 ASP 65 296 296 ASP ASP B . n B 1 66 HIS 66 297 297 HIS HIS B . n B 1 67 ARG 67 298 298 ARG ARG B . n B 1 68 ARG 68 299 299 ARG ARG B . n B 1 69 GLY 69 300 300 GLY GLY B . n B 1 70 SER 70 301 301 SER SER B . n B 1 71 ALA 71 302 302 ALA ALA B . n B 1 72 SER 72 303 303 SER SER B . n B 1 73 TYR 73 304 304 TYR TYR B . n B 1 74 PRO 74 305 305 PRO PRO B . n B 1 75 GLY 75 306 306 GLY GLY B . n B 1 76 ASN 76 307 307 ASN ASN B . n B 1 77 ASN 77 308 308 ASN ASN B . n B 1 78 ALA 78 309 309 ALA ALA B . n B 1 79 THR 79 310 310 THR THR B . n B 1 80 ASN 80 311 311 ASN ASN B . n B 1 81 VAL 81 312 312 VAL VAL B . n B 1 82 LEU 82 313 313 LEU LEU B . n B 1 83 GLN 83 314 314 GLN GLN B . n B 1 84 PHE 84 315 315 PHE PHE B . n B 1 85 TRP 85 316 316 TRP TRP B . n B 1 86 TYR 86 317 317 TYR TYR B . n B 1 87 ALA 87 318 318 ALA ALA B . n B 1 88 ASN 88 319 319 ASN ASN B . n B 1 89 ALA 89 320 320 ALA ALA B . n B 1 90 GLY 90 321 321 GLY GLY B . n B 1 91 SER 91 322 322 SER SER B . n B 1 92 ALA 92 323 323 ALA ALA B . n B 1 93 ILE 93 324 324 ILE ILE B . n B 1 94 ASP 94 325 325 ASP ASP B . n B 1 95 ASN 95 326 326 ASN ASN B . n B 1 96 PRO 96 327 327 PRO PRO B . n B 1 97 ILE 97 328 328 ILE ILE B . n B 1 98 SER 98 329 329 SER SER B . n B 1 99 GLN 99 330 330 GLN GLN B . n B 1 100 VAL 100 331 331 VAL VAL B . n B 1 101 ALA 101 332 332 ALA ALA B . n B 1 102 PRO 102 333 333 PRO PRO B . n B 1 103 ASP 103 334 334 ASP ASP B . n B 1 104 GLY 104 335 335 GLY GLY B . n B 1 105 PHE 105 336 336 PHE PHE B . n B 1 106 PRO 106 337 337 PRO PRO B . n B 1 107 ASP 107 338 338 ASP ASP B . n B 1 108 MET 108 339 339 MET MET B . n B 1 109 SER 109 340 340 SER SER B . n B 1 110 PHE 110 341 341 PHE PHE B . n B 1 111 VAL 111 342 342 VAL VAL B . n B 1 112 PRO 112 343 343 PRO PRO B . n B 1 113 PHE 113 344 344 PHE PHE B . n B 1 114 ASN 114 345 345 ASN ASN B . n B 1 115 GLY 115 346 346 GLY GLY B . n B 1 116 PRO 116 347 347 PRO PRO B . n B 1 117 GLY 117 348 348 GLY GLY B . n B 1 118 ILE 118 349 349 ILE ILE B . n B 1 119 PRO 119 350 350 PRO PRO B . n B 1 120 ALA 120 351 351 ALA ALA B . n B 1 121 ALA 121 352 352 ALA ALA B . n B 1 122 GLY 122 353 353 GLY GLY B . n B 1 123 TRP 123 354 354 TRP TRP B . n B 1 124 VAL 124 355 355 VAL VAL B . n B 1 125 GLY 125 356 356 GLY GLY B . n B 1 126 PHE 126 357 357 PHE PHE B . n B 1 127 GLY 127 358 358 GLY GLY B . n B 1 128 ALA 128 359 359 ALA ALA B . n B 1 129 ILE 129 360 360 ILE ILE B . n B 1 130 TRP 130 361 361 TRP TRP B . n B 1 131 ASN 131 362 362 ASN ASN B . n B 1 132 SER 132 363 363 SER SER B . n B 1 133 ASN 133 364 364 ASN ASN B . n B 1 134 SER 134 365 365 SER SER B . n B 1 135 GLY 135 366 366 GLY GLY B . n B 1 136 ALA 136 367 367 ALA ALA B . n B 1 137 PRO 137 368 368 PRO PRO B . n B 1 138 ASN 138 369 369 ASN ASN B . n B 1 139 VAL 139 370 370 VAL VAL B . n B 1 140 THR 140 371 371 THR THR B . n B 1 141 THR 141 372 372 THR THR B . n B 1 142 VAL 142 373 373 VAL VAL B . n B 1 143 GLN 143 374 374 GLN GLN B . n B 1 144 ALA 144 375 375 ALA ALA B . n B 1 145 TYR 145 376 376 TYR TYR B . n B 1 146 GLU 146 377 377 GLU GLU B . n B 1 147 LEU 147 378 378 LEU LEU B . n B 1 148 GLY 148 379 379 GLY GLY B . n B 1 149 PHE 149 380 380 PHE PHE B . n B 1 150 ALA 150 381 381 ALA ALA B . n B 1 151 THR 151 382 382 THR THR B . n B 1 152 GLY 152 383 383 GLY GLY B . n B 1 153 ALA 153 384 384 ALA ALA B . n B 1 154 PRO 154 385 385 PRO PRO B . n B 1 155 GLY 155 386 386 GLY GLY B . n B 1 156 ASN 156 387 387 ASN ASN B . n B 1 157 LEU 157 388 388 LEU LEU B . n B 1 158 GLN 158 389 389 GLN GLN B . n B 1 159 PRO 159 390 390 PRO PRO B . n B 1 160 THR 160 391 391 THR THR B . n B 1 161 THR 161 392 392 THR THR B . n B 1 162 ASN 162 393 393 ASN ASN B . n B 1 163 THR 163 394 394 THR THR B . n B 1 164 SER 164 395 395 SER SER B . n B 1 165 GLY 165 396 396 GLY GLY B . n B 1 166 SER 166 397 397 SER SER B . n B 1 167 GLN 167 398 398 GLN GLN B . n B 1 168 THR 168 399 399 THR THR B . n B 1 169 VAL 169 400 400 VAL VAL B . n B 1 170 ALA 170 401 401 ALA ALA B . n B 1 171 LYS 171 402 402 LYS LYS B . n B 1 172 SER 172 403 403 SER SER B . n B 1 173 ILE 173 404 404 ILE ILE B . n B 1 174 TYR 174 405 405 TYR TYR B . n B 1 175 ALA 175 406 406 ALA ALA B . n B 1 176 VAL 176 407 407 VAL VAL B . n B 1 177 VAL 177 408 408 VAL VAL B . n B 1 178 THR 178 409 409 THR THR B . n B 1 179 GLY 179 410 410 GLY GLY B . n B 1 180 THR 180 411 411 THR THR B . n B 1 181 ALA 181 412 412 ALA ALA B . n B 1 182 GLN 182 413 413 GLN GLN B . n B 1 183 ASN 183 414 414 ASN ASN B . n B 1 184 PRO 184 415 415 PRO PRO B . n B 1 185 ALA 185 416 416 ALA ALA B . n B 1 186 GLY 186 417 417 GLY GLY B . n B 1 187 LEU 187 418 418 LEU LEU B . n B 1 188 PHE 188 419 419 PHE PHE B . n B 1 189 VAL 189 420 420 VAL VAL B . n B 1 190 MET 190 421 421 MET MET B . n B 1 191 ALA 191 422 422 ALA ALA B . n B 1 192 SER 192 423 423 SER SER B . n B 1 193 GLY 193 424 424 GLY GLY B . n B 1 194 VAL 194 425 425 VAL VAL B . n B 1 195 ILE 195 426 426 ILE ILE B . n B 1 196 SER 196 427 427 SER SER B . n B 1 197 THR 197 428 428 THR THR B . n B 1 198 PRO 198 429 429 PRO PRO B . n B 1 199 SER 199 430 430 SER SER B . n B 1 200 ALA 200 431 431 ALA ALA B . n B 1 201 ASN 201 432 432 ASN ASN B . n B 1 202 ALA 202 433 433 ALA ALA B . n B 1 203 ILE 203 434 434 ILE ILE B . n B 1 204 THR 204 435 435 THR THR B . n B 1 205 TYR 205 436 436 TYR TYR B . n B 1 206 THR 206 437 437 THR THR B . n B 1 207 PRO 207 438 438 PRO PRO B . n B 1 208 GLN 208 439 439 GLN GLN B . n B 1 209 PRO 209 440 440 PRO PRO B . n B 1 210 ASP 210 441 441 ASP ASP B . n B 1 211 ARG 211 442 442 ARG ARG B . n B 1 212 ILE 212 443 443 ILE ILE B . n B 1 213 VAL 213 444 444 VAL VAL B . n B 1 214 THR 214 445 445 THR THR B . n B 1 215 THR 215 446 446 THR THR B . n B 1 216 PRO 216 447 447 PRO PRO B . n B 1 217 GLY 217 448 448 GLY GLY B . n B 1 218 THR 218 449 449 THR THR B . n B 1 219 PRO 219 450 450 PRO PRO B . n B 1 220 ALA 220 451 451 ALA ALA B . n B 1 221 ALA 221 452 452 ALA ALA B . n B 1 222 ALA 222 453 453 ALA ALA B . n B 1 223 PRO 223 454 454 PRO PRO B . n B 1 224 VAL 224 455 455 VAL VAL B . n B 1 225 GLY 225 456 456 GLY GLY B . n B 1 226 LYS 226 457 457 LYS LYS B . n B 1 227 ASN 227 458 458 ASN ASN B . n B 1 228 THR 228 459 459 THR THR B . n B 1 229 PRO 229 460 460 PRO PRO B . n B 1 230 ILE 230 461 461 ILE ILE B . n B 1 231 MET 231 462 462 MET MET B . n B 1 232 PHE 232 463 463 PHE PHE B . n B 1 233 ALA 233 464 464 ALA ALA B . n B 1 234 SER 234 465 465 SER SER B . n B 1 235 VAL 235 466 466 VAL VAL B . n B 1 236 VAL 236 467 467 VAL VAL B . n B 1 237 ARG 237 468 468 ARG ARG B . n B 1 238 ARG 238 469 469 ARG ARG B . n B 1 239 THR 239 470 470 THR THR B . n B 1 240 GLY 240 471 471 GLY GLY B . n B 1 241 ASP 241 472 472 ASP ASP B . n B 1 242 VAL 242 473 473 VAL VAL B . n B 1 243 ASN 243 474 474 ASN ASN B . n B 1 244 ALA 244 475 475 ALA ALA B . n B 1 245 THR 245 476 476 THR THR B . n B 1 246 ALA 246 477 477 ALA ALA B . n B 1 247 GLY 247 478 478 GLY GLY B . n B 1 248 SER 248 479 479 SER SER B . n B 1 249 ALA 249 480 480 ALA ALA B . n B 1 250 ASN 250 481 481 ASN ASN B . n B 1 251 GLY 251 482 482 GLY GLY B . n B 1 252 THR 252 483 483 THR THR B . n B 1 253 GLN 253 484 484 GLN GLN B . n B 1 254 TYR 254 485 485 TYR TYR B . n B 1 255 GLY 255 486 486 GLY GLY B . n B 1 256 THR 256 487 487 THR THR B . n B 1 257 GLY 257 488 488 GLY GLY B . n B 1 258 SER 258 489 489 SER SER B . n B 1 259 GLN 259 490 490 GLN GLN B . n B 1 260 PRO 260 491 491 PRO PRO B . n B 1 261 LEU 261 492 492 LEU LEU B . n B 1 262 PRO 262 493 493 PRO PRO B . n B 1 263 VAL 263 494 494 VAL VAL B . n B 1 264 THR 264 495 495 THR THR B . n B 1 265 ILE 265 496 496 ILE ILE B . n B 1 266 GLY 266 497 497 GLY GLY B . n B 1 267 LEU 267 498 498 LEU LEU B . n B 1 268 SER 268 499 499 SER SER B . n B 1 269 LEU 269 500 500 LEU LEU B . n B 1 270 ASN 270 501 501 ASN ASN B . n B 1 271 ASN 271 502 502 ASN ASN B . n B 1 272 TYR 272 503 503 TYR TYR B . n B 1 273 SER 273 504 504 SER SER B . n B 1 274 SER 274 505 505 SER SER B . n B 1 275 ALA 275 506 506 ALA ALA B . n B 1 276 LEU 276 507 507 LEU LEU B . n B 1 277 MET 277 508 508 MET MET B . n B 1 278 PRO 278 509 509 PRO PRO B . n B 1 279 GLY 279 510 510 GLY GLY B . n B 1 280 GLN 280 511 511 GLN GLN B . n B 1 281 PHE 281 512 512 PHE PHE B . n B 1 282 PHE 282 513 513 PHE PHE B . n B 1 283 VAL 283 514 514 VAL VAL B . n B 1 284 TRP 284 515 515 TRP TRP B . n B 1 285 GLN 285 516 516 GLN GLN B . n B 1 286 LEU 286 517 517 LEU LEU B . n B 1 287 THR 287 518 518 THR THR B . n B 1 288 PHE 288 519 519 PHE PHE B . n B 1 289 ALA 289 520 520 ALA ALA B . n B 1 290 SER 290 521 521 SER SER B . n B 1 291 GLY 291 522 522 GLY GLY B . n B 1 292 PHE 292 523 523 PHE PHE B . n B 1 293 MET 293 524 524 MET MET B . n B 1 294 GLU 294 525 525 GLU GLU B . n B 1 295 ILE 295 526 526 ILE ILE B . n B 1 296 GLY 296 527 527 GLY GLY B . n B 1 297 LEU 297 528 528 LEU LEU B . n B 1 298 SER 298 529 529 SER SER B . n B 1 299 VAL 299 530 530 VAL VAL B . n B 1 300 ASP 300 531 531 ASP ASP B . n B 1 301 GLY 301 532 532 GLY GLY B . n B 1 302 TYR 302 533 533 TYR TYR B . n B 1 303 PHE 303 534 534 PHE PHE B . n B 1 304 TYR 304 535 535 TYR TYR B . n B 1 305 ALA 305 536 536 ALA ALA B . n B 1 306 GLY 306 537 537 GLY GLY B . n B 1 307 THR 307 538 538 THR THR B . n B 1 308 GLY 308 539 539 GLY GLY B . n B 1 309 ALA 309 540 540 ALA ALA B . n B 1 310 SER 310 541 541 SER SER B . n B 1 311 THR 311 542 542 THR THR B . n B 1 312 THR 312 543 543 THR THR B . n B 1 313 LEU 313 544 544 LEU LEU B . n B 1 314 ILE 314 545 545 ILE ILE B . n B 1 315 ASP 315 546 546 ASP ASP B . n B 1 316 LEU 316 547 547 LEU LEU B . n B 1 317 THR 317 548 548 THR THR B . n B 1 318 GLU 318 549 549 GLU GLU B . n B 1 319 LEU 319 550 550 LEU LEU B . n B 1 320 ILE 320 551 551 ILE ILE B . n B 1 321 ASP 321 552 552 ASP ASP B . n B 1 322 VAL 322 553 553 VAL VAL B . n B 1 323 ARG 323 554 554 ARG ARG B . n B 1 324 PRO 324 555 555 PRO PRO B . n B 1 325 VAL 325 556 556 VAL VAL B . n B 1 326 GLY 326 557 557 GLY GLY B . n B 1 327 PRO 327 558 558 PRO PRO B . n B 1 328 ARG 328 559 559 ARG ARG B . n B 1 329 PRO 329 560 560 PRO PRO B . n B 1 330 SER 330 561 561 SER SER B . n B 1 331 LYS 331 562 562 LYS LYS B . n B 1 332 SER 332 563 563 SER SER B . n B 1 333 THR 333 564 564 THR THR B . n B 1 334 LEU 334 565 565 LEU LEU B . n B 1 335 VAL 335 566 566 VAL VAL B . n B 1 336 PHE 336 567 567 PHE PHE B . n B 1 337 ASN 337 568 568 ASN ASN B . n B 1 338 LEU 338 569 569 LEU LEU B . n B 1 339 GLY 339 570 570 GLY GLY B . n B 1 340 GLY 340 571 ? ? ? B . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9I8J _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9I8J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9I8J _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9I8J _struct.title 'AB Spike of RHDV mutant N15' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9I8J _struct_keywords.text 'Calicivirus, Localized reconstruction, CryoEM, Virus Like Particle, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_RHDVA _struct_ref.pdbx_db_accession Q86119 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KTVDSISPAGLLTTPVLTGVGNDNRWNGQIVGLQPVPGGFSTCNRHWNLNGSTYGWSSPRFADIDHRRGSASYPGNNATN VLQFWYANAGSAIDNPISQVAPDGFPDMSFVPFNGPGIPAAGWVGFGAIWNSNSGAPNVTTVQAYELGFATGAPGNLQPT TNTSGSQTVAKSIYAVVTGTAQNPAGLFVMASGVISTPSANAITYTPQPDRIVTTPGTPAAAPVGKNTPIMFASVVRRTG DVNATAGSANGTQYGTGSQPLPVTIGLSLNNYSSALMPGQFFVWQLTFASGFMEIGLSVDGYFYAGTGASTTLIDLTELI DVRPVGPRPSKSTLVFNLGG ; _struct_ref.pdbx_align_begin 1997 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9I8J A 1 ? 340 ? Q86119 1997 ? 2336 ? 232 571 2 1 9I8J B 1 ? 340 ? Q86119 1997 ? 2336 ? 232 571 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 13 ? LEU A 17 ? THR A 244 LEU A 248 5 ? 5 HELX_P HELX_P2 AA2 PRO A 260 ? LEU A 269 ? PRO A 491 LEU A 500 1 ? 10 HELX_P HELX_P3 AA3 PRO B 260 ? SER B 268 ? PRO B 491 SER B 499 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 153 A . ? ALA 384 A PRO 154 A ? PRO 385 A 1 -3.38 2 THR 206 A . ? THR 437 A PRO 207 A ? PRO 438 A 1 5.38 3 ALA 153 B . ? ALA 384 B PRO 154 B ? PRO 385 B 1 1.05 4 THR 206 B . ? THR 437 B PRO 207 B ? PRO 438 B 1 -6.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 7 ? AA4 ? 5 ? AA5 ? 6 ? AA6 ? 8 ? AA7 ? 7 ? AA8 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA6 6 7 ? anti-parallel AA6 7 8 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel AA7 6 7 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 254 ? GLY A 257 ? TYR A 485 GLY A 488 AA1 2 THR A 228 ? VAL A 235 ? THR A 459 VAL A 466 AA1 3 PHE A 303 ? ALA A 305 ? PHE A 534 ALA A 536 AA1 4 PHE A 292 ? LEU A 297 ? PHE A 523 LEU A 528 AA1 5 GLN A 280 ? THR A 287 ? GLN A 511 THR A 518 AA1 6 PRO A 324 ? PRO A 329 ? PRO A 555 PRO A 560 AA2 1 ILE A 314 ? ASP A 315 ? ILE A 545 ASP A 546 AA2 2 ILE A 30 ? PRO A 35 ? ILE A 261 PRO A 266 AA2 3 THR A 228 ? VAL A 235 ? THR A 459 VAL A 466 AA2 4 PHE A 303 ? ALA A 305 ? PHE A 534 ALA A 536 AA2 5 PHE A 292 ? LEU A 297 ? PHE A 523 LEU A 528 AA2 6 PHE A 336 ? ASN A 337 ? PHE A 567 ASN A 568 AA3 1 ASP A 63 ? HIS A 66 ? ASP A 294 HIS A 297 AA3 2 ALA A 185 ? MET A 190 ? ALA A 416 MET A 421 AA3 3 VAL A 124 ? ASN A 131 ? VAL A 355 ASN A 362 AA3 4 PRO A 137 ? THR A 151 ? PRO A 368 THR A 382 AA3 5 GLN A 167 ? SER A 172 ? GLN A 398 SER A 403 AA3 6 PHE A 84 ? ASN A 88 ? PHE A 315 ASN A 319 AA3 7 SER A 70 ? SER A 72 ? SER A 301 SER A 303 AA4 1 ASP A 63 ? HIS A 66 ? ASP A 294 HIS A 297 AA4 2 ALA A 185 ? MET A 190 ? ALA A 416 MET A 421 AA4 3 VAL A 124 ? ASN A 131 ? VAL A 355 ASN A 362 AA4 4 PRO A 137 ? THR A 151 ? PRO A 368 THR A 382 AA4 5 GLN A 158 ? PRO A 159 ? GLN A 389 PRO A 390 AA5 1 TYR B 254 ? GLY B 257 ? TYR B 485 GLY B 488 AA5 2 THR B 228 ? VAL B 235 ? THR B 459 VAL B 466 AA5 3 PHE B 303 ? ALA B 305 ? PHE B 534 ALA B 536 AA5 4 ILE B 295 ? LEU B 297 ? ILE B 526 LEU B 528 AA5 5 GLN B 280 ? THR B 287 ? GLN B 511 THR B 518 AA5 6 ASP B 321 ? PRO B 329 ? ASP B 552 PRO B 560 AA6 1 ILE B 314 ? ASP B 315 ? ILE B 545 ASP B 546 AA6 2 ILE B 30 ? PRO B 35 ? ILE B 261 PRO B 266 AA6 3 THR B 228 ? VAL B 235 ? THR B 459 VAL B 466 AA6 4 PHE B 303 ? ALA B 305 ? PHE B 534 ALA B 536 AA6 5 ILE B 295 ? LEU B 297 ? ILE B 526 LEU B 528 AA6 6 GLN B 280 ? THR B 287 ? GLN B 511 THR B 518 AA6 7 PHE B 292 ? MET B 293 ? PHE B 523 MET B 524 AA6 8 PHE B 336 ? ASN B 337 ? PHE B 567 ASN B 568 AA7 1 ASP B 63 ? ASP B 65 ? ASP B 294 ASP B 296 AA7 2 ALA B 185 ? MET B 190 ? ALA B 416 MET B 421 AA7 3 TRP B 123 ? ASN B 131 ? TRP B 354 ASN B 362 AA7 4 PRO B 137 ? THR B 151 ? PRO B 368 THR B 382 AA7 5 GLN B 167 ? SER B 172 ? GLN B 398 SER B 403 AA7 6 PHE B 84 ? ASN B 88 ? PHE B 315 ASN B 319 AA7 7 SER B 70 ? SER B 72 ? SER B 301 SER B 303 AA8 1 ASP B 63 ? ASP B 65 ? ASP B 294 ASP B 296 AA8 2 ALA B 185 ? MET B 190 ? ALA B 416 MET B 421 AA8 3 TRP B 123 ? ASN B 131 ? TRP B 354 ASN B 362 AA8 4 PRO B 137 ? THR B 151 ? PRO B 368 THR B 382 AA8 5 GLN B 158 ? PRO B 159 ? GLN B 389 PRO B 390 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 255 ? O GLY A 486 N SER A 234 ? N SER A 465 AA1 2 3 N THR A 228 ? N THR A 459 O ALA A 305 ? O ALA A 536 AA1 3 4 O TYR A 304 ? O TYR A 535 N GLY A 296 ? N GLY A 527 AA1 4 5 O ILE A 295 ? O ILE A 526 N TRP A 284 ? N TRP A 515 AA1 5 6 N PHE A 281 ? N PHE A 512 O ARG A 328 ? O ARG A 559 AA2 1 2 O ILE A 314 ? O ILE A 545 N LEU A 33 ? N LEU A 264 AA2 2 3 N GLN A 34 ? N GLN A 265 O MET A 231 ? O MET A 462 AA2 3 4 N THR A 228 ? N THR A 459 O ALA A 305 ? O ALA A 536 AA2 4 5 O TYR A 304 ? O TYR A 535 N GLY A 296 ? N GLY A 527 AA2 5 6 N PHE A 292 ? N PHE A 523 O ASN A 337 ? O ASN A 568 AA3 1 2 N HIS A 66 ? N HIS A 297 O LEU A 187 ? O LEU A 418 AA3 2 3 O MET A 190 ? O MET A 421 N PHE A 126 ? N PHE A 357 AA3 3 4 N GLY A 125 ? N GLY A 356 O TYR A 145 ? O TYR A 376 AA3 4 5 N GLU A 146 ? N GLU A 377 O LYS A 171 ? O LYS A 402 AA3 5 6 O ALA A 170 ? O ALA A 401 N TRP A 85 ? N TRP A 316 AA3 6 7 O PHE A 84 ? O PHE A 315 N SER A 72 ? N SER A 303 AA4 1 2 N HIS A 66 ? N HIS A 297 O LEU A 187 ? O LEU A 418 AA4 2 3 O MET A 190 ? O MET A 421 N PHE A 126 ? N PHE A 357 AA4 3 4 N GLY A 125 ? N GLY A 356 O TYR A 145 ? O TYR A 376 AA4 4 5 N THR A 151 ? N THR A 382 O GLN A 158 ? O GLN A 389 AA5 1 2 O GLY B 257 ? O GLY B 488 N PHE B 232 ? N PHE B 463 AA5 2 3 N THR B 228 ? N THR B 459 O ALA B 305 ? O ALA B 536 AA5 3 4 O TYR B 304 ? O TYR B 535 N GLY B 296 ? N GLY B 527 AA5 4 5 O LEU B 297 ? O LEU B 528 N PHE B 282 ? N PHE B 513 AA5 5 6 N VAL B 283 ? N VAL B 514 O GLY B 326 ? O GLY B 557 AA6 1 2 O ILE B 314 ? O ILE B 545 N LEU B 33 ? N LEU B 264 AA6 2 3 N GLY B 32 ? N GLY B 263 O ALA B 233 ? O ALA B 464 AA6 3 4 N THR B 228 ? N THR B 459 O ALA B 305 ? O ALA B 536 AA6 4 5 O TYR B 304 ? O TYR B 535 N GLY B 296 ? N GLY B 527 AA6 5 6 O LEU B 297 ? O LEU B 528 N PHE B 282 ? N PHE B 513 AA6 6 7 N LEU B 286 ? N LEU B 517 O MET B 293 ? O MET B 524 AA6 7 8 N PHE B 292 ? N PHE B 523 O ASN B 337 ? O ASN B 568 AA7 1 2 N ILE B 64 ? N ILE B 295 O VAL B 189 ? O VAL B 420 AA7 2 3 O GLY B 186 ? O GLY B 417 N TRP B 130 ? N TRP B 361 AA7 3 4 N GLY B 127 ? N GLY B 358 O GLN B 143 ? O GLN B 374 AA7 4 5 N GLU B 146 ? N GLU B 377 O LYS B 171 ? O LYS B 402 AA7 5 6 O ALA B 170 ? O ALA B 401 N TRP B 85 ? N TRP B 316 AA7 6 7 O PHE B 84 ? O PHE B 315 N SER B 72 ? N SER B 303 AA8 1 2 N ILE B 64 ? N ILE B 295 O VAL B 189 ? O VAL B 420 AA8 2 3 O GLY B 186 ? O GLY B 417 N TRP B 130 ? N TRP B 361 AA8 3 4 N GLY B 127 ? N GLY B 358 O GLN B 143 ? O GLN B 374 AA8 4 5 N THR B 151 ? N THR B 382 O GLN B 158 ? O GLN B 389 # _pdbx_entry_details.entry_id 9I8J _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 296 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 296 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 296 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.15 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.85 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 233 ? ? 42.49 -118.24 2 1 ASP A 235 ? ? -95.80 58.63 3 1 ASN A 258 ? ? -92.96 57.51 4 1 CYS A 274 ? ? -141.65 12.38 5 1 SER A 288 ? ? 63.11 77.60 6 1 ARG A 291 ? ? -170.08 132.71 7 1 ALA A 293 ? ? -102.29 -64.36 8 1 ALA A 309 ? ? -94.30 54.94 9 1 ASP A 338 ? ? -94.24 56.45 10 1 ALA A 352 ? ? 61.47 -165.15 11 1 ASN A 364 ? ? 59.30 70.56 12 1 SER A 365 ? ? 60.06 69.08 13 1 SER A 430 ? ? -127.74 -169.18 14 1 ALA A 431 ? ? -74.21 -112.31 15 1 ASN A 432 ? ? 54.92 -140.02 16 1 ALA A 433 ? ? -162.13 119.08 17 1 ALA A 475 ? ? -95.62 56.20 18 1 ASN A 481 ? ? 67.53 165.00 19 1 LEU A 547 ? ? -95.27 58.41 20 1 VAL A 556 ? ? -125.12 -54.24 21 1 ASN B 258 ? ? -102.45 74.36 22 1 ASN B 275 ? ? -99.81 -62.63 23 1 SER B 288 ? ? 63.71 75.85 24 1 ALA B 293 ? ? -102.71 -89.01 25 1 ALA B 309 ? ? -92.97 55.70 26 1 ILE B 328 ? ? -93.03 -60.29 27 1 ASP B 338 ? ? -94.80 51.38 28 1 ALA B 352 ? ? 53.80 -158.95 29 1 ALA B 431 ? ? 62.70 72.53 30 1 ASN B 432 ? ? -109.01 -89.09 31 1 ILE B 434 ? ? 69.73 -129.32 32 1 ALA B 475 ? ? -97.48 57.19 33 1 ALA B 480 ? ? 55.66 72.55 34 1 ASN B 481 ? ? 75.36 144.61 35 1 SER B 521 ? ? -140.24 12.73 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9I8J _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9I8J _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 169000 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 6.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Spike AB formed by domains P of two units of the capsid protein (A and B)' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9I8J _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2300 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER/RHODIUM _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.virus_isolate OTHER _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped NO _em_virus_entity.empty YES _em_virus_entity.details ? # _em_vitrification.entry_id 9I8J _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9I8J _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 571 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2025-02-05 _em_admin.deposition_site PDBE _em_admin.entry_id 9I8J _em_admin.last_update 2025-12-03 _em_admin.map_release_date 2025-12-03 _em_admin.title 'AB Spike of RHDV mutant N15' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 11976 _em_entity_assembly_naturalsource.organism 'Rabbit hemorrhagic disease virus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7111 _em_entity_assembly_recombinant.organism 'Trichoplusia ni' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 32 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? Xmipp ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.21.2_5419 ? 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Spanish Ministry of Science, Innovation, and Universities' Spain PID2023-146132NB-I00 1 'Spanish Ministry of Science, Innovation, and Universities' Spain PID2022-140925OB-I00 2 # _atom_sites.entry_id 9I8J _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #