data_9IU8 # _entry.id 9IU8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9IU8 pdb_00009iu8 10.2210/pdb9iu8/pdb WWPDB D_1300049644 ? ? EMDB EMD-60893 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-03-04 ? 2 'EM metadata' 1 0 2026-03-04 ? 3 FSC 1 0 2026-03-04 ? 4 'Half map' 1 0 2026-03-04 1 5 'Half map' 1 0 2026-03-04 2 6 Image 1 0 2026-03-04 ? 7 Mask 1 0 2026-03-04 1 8 'Primary map' 1 0 2026-03-04 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9IU8 _pdbx_database_status.recvd_initial_deposition_date 2024-07-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details ;Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the pre-strand exchange state (attP-L) ; _pdbx_database_related.db_id EMD-60893 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email nisimasu@g.ecc.u-tokyo.ac.jp _pdbx_contact_author.name_first Hiroshi _pdbx_contact_author.name_last Nishimasu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2505-1416 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Soma, T.' 1 ? 'Hiraizumi, M.' 2 ? 'Yamashita, K.' 3 ? 'Nishimasu, H.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the pre-strand exchange state (attP-L) ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Soma, T.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Integrase 56439.949 1 ? ? ? ? 2 polymer syn attP 16028.246 1 ? ? ? ? 3 polymer syn attP 16015.266 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MRALVVIRLSRVTDATTSPERQLESCQQLCAQRGWDVVGVAEDLDVSGAVDPFDRKRRPNLARWLAFEEQPFDVIVAYRV DRLTRSIRHLQQLVHWAEDHKKLVVSATEAHFDTTTPFAAVVIALMGTVAQMELEAIKERNRSAAHFNIRAGKYRGSLPP WGYLPTRVDGEWRLVPDPVQRERILEVYHRVVDNHEPLHLVAHDLNRRGVLSPKDYFAQLQGREPQGREWSATALKRSMI SEAMLGYATLNGKTVRDDDGAPLVRAEPILTREQLEALRAELVKTSRAKPAVSTPSLLLRVLFCAVCGEPAYKFAGGGRK HPRYRCRSMGFPKHCGNGTVAMAEWDAFCEEQVLDLLGDAERLEKVWVAGSDSAVELAEVNAELVDLTSLIGSPAYRAGS PQREALDARIAALAARQEELEGLEARPSGWEWRETGQRFGDWWREQDTAAKNTWLRSMNVRLTFDVRGGLTRTIDFGDLQ EYEQHLRLGSVVERLHTGMS ; ;MRALVVIRLSRVTDATTSPERQLESCQQLCAQRGWDVVGVAEDLDVSGAVDPFDRKRRPNLARWLAFEEQPFDVIVAYRV DRLTRSIRHLQQLVHWAEDHKKLVVSATEAHFDTTTPFAAVVIALMGTVAQMELEAIKERNRSAAHFNIRAGKYRGSLPP WGYLPTRVDGEWRLVPDPVQRERILEVYHRVVDNHEPLHLVAHDLNRRGVLSPKDYFAQLQGREPQGREWSATALKRSMI SEAMLGYATLNGKTVRDDDGAPLVRAEPILTREQLEALRAELVKTSRAKPAVSTPSLLLRVLFCAVCGEPAYKFAGGGRK HPRYRCRSMGFPKHCGNGTVAMAEWDAFCEEQVLDLLGDAERLEKVWVAGSDSAVELAEVNAELVDLTSLIGSPAYRAGS PQREALDARIAALAARQEELEGLEARPSGWEWRETGQRFGDWWREQDTAAKNTWLRSMNVRLTFDVRGGLTRTIDFGDLQ EYEQHLRLGSVVERLHTGMS ; A ? 2 polydeoxyribonucleotide no no ;(DG)(DT)(DG)(DG)(DT)(DT)(DT)(DG)(DT)(DC)(DT)(DG)(DG)(DT)(DC)(DA)(DA)(DC)(DC)(DA) (DC)(DC)(DG)(DC)(DG)(DG)(DT)(DC)(DT)(DC)(DA)(DG)(DT)(DG)(DG)(DT)(DG)(DT)(DA)(DC) (DG)(DG)(DT)(DA)(DC)(DA)(DA)(DA)(DC)(DC)(DC)(DA) ; GTGGTTTGTCTGGTCAACCACCGCGGTCTCAGTGGTGTACGGTACAAACCCA E ? 3 polydeoxyribonucleotide no no ;(DT)(DG)(DG)(DG)(DT)(DT)(DT)(DG)(DT)(DA)(DC)(DC)(DG)(DT)(DA)(DC)(DA)(DC)(DC)(DA) (DC)(DT)(DG)(DA)(DG)(DA)(DC)(DC)(DG)(DC)(DG)(DG)(DT)(DG)(DG)(DT)(DT)(DG)(DA)(DC) (DC)(DA)(DG)(DA)(DC)(DA)(DA)(DA)(DC)(DC)(DA)(DC) ; TGGGTTTGTACCGTACACCACTGAGACCGCGGTGGTTGACCAGACAAACCAC F ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 ALA n 1 4 LEU n 1 5 VAL n 1 6 VAL n 1 7 ILE n 1 8 ARG n 1 9 LEU n 1 10 SER n 1 11 ARG n 1 12 VAL n 1 13 THR n 1 14 ASP n 1 15 ALA n 1 16 THR n 1 17 THR n 1 18 SER n 1 19 PRO n 1 20 GLU n 1 21 ARG n 1 22 GLN n 1 23 LEU n 1 24 GLU n 1 25 SER n 1 26 CYS n 1 27 GLN n 1 28 GLN n 1 29 LEU n 1 30 CYS n 1 31 ALA n 1 32 GLN n 1 33 ARG n 1 34 GLY n 1 35 TRP n 1 36 ASP n 1 37 VAL n 1 38 VAL n 1 39 GLY n 1 40 VAL n 1 41 ALA n 1 42 GLU n 1 43 ASP n 1 44 LEU n 1 45 ASP n 1 46 VAL n 1 47 SER n 1 48 GLY n 1 49 ALA n 1 50 VAL n 1 51 ASP n 1 52 PRO n 1 53 PHE n 1 54 ASP n 1 55 ARG n 1 56 LYS n 1 57 ARG n 1 58 ARG n 1 59 PRO n 1 60 ASN n 1 61 LEU n 1 62 ALA n 1 63 ARG n 1 64 TRP n 1 65 LEU n 1 66 ALA n 1 67 PHE n 1 68 GLU n 1 69 GLU n 1 70 GLN n 1 71 PRO n 1 72 PHE n 1 73 ASP n 1 74 VAL n 1 75 ILE n 1 76 VAL n 1 77 ALA n 1 78 TYR n 1 79 ARG n 1 80 VAL n 1 81 ASP n 1 82 ARG n 1 83 LEU n 1 84 THR n 1 85 ARG n 1 86 SER n 1 87 ILE n 1 88 ARG n 1 89 HIS n 1 90 LEU n 1 91 GLN n 1 92 GLN n 1 93 LEU n 1 94 VAL n 1 95 HIS n 1 96 TRP n 1 97 ALA n 1 98 GLU n 1 99 ASP n 1 100 HIS n 1 101 LYS n 1 102 LYS n 1 103 LEU n 1 104 VAL n 1 105 VAL n 1 106 SER n 1 107 ALA n 1 108 THR n 1 109 GLU n 1 110 ALA n 1 111 HIS n 1 112 PHE n 1 113 ASP n 1 114 THR n 1 115 THR n 1 116 THR n 1 117 PRO n 1 118 PHE n 1 119 ALA n 1 120 ALA n 1 121 VAL n 1 122 VAL n 1 123 ILE n 1 124 ALA n 1 125 LEU n 1 126 MET n 1 127 GLY n 1 128 THR n 1 129 VAL n 1 130 ALA n 1 131 GLN n 1 132 MET n 1 133 GLU n 1 134 LEU n 1 135 GLU n 1 136 ALA n 1 137 ILE n 1 138 LYS n 1 139 GLU n 1 140 ARG n 1 141 ASN n 1 142 ARG n 1 143 SER n 1 144 ALA n 1 145 ALA n 1 146 HIS n 1 147 PHE n 1 148 ASN n 1 149 ILE n 1 150 ARG n 1 151 ALA n 1 152 GLY n 1 153 LYS n 1 154 TYR n 1 155 ARG n 1 156 GLY n 1 157 SER n 1 158 LEU n 1 159 PRO n 1 160 PRO n 1 161 TRP n 1 162 GLY n 1 163 TYR n 1 164 LEU n 1 165 PRO n 1 166 THR n 1 167 ARG n 1 168 VAL n 1 169 ASP n 1 170 GLY n 1 171 GLU n 1 172 TRP n 1 173 ARG n 1 174 LEU n 1 175 VAL n 1 176 PRO n 1 177 ASP n 1 178 PRO n 1 179 VAL n 1 180 GLN n 1 181 ARG n 1 182 GLU n 1 183 ARG n 1 184 ILE n 1 185 LEU n 1 186 GLU n 1 187 VAL n 1 188 TYR n 1 189 HIS n 1 190 ARG n 1 191 VAL n 1 192 VAL n 1 193 ASP n 1 194 ASN n 1 195 HIS n 1 196 GLU n 1 197 PRO n 1 198 LEU n 1 199 HIS n 1 200 LEU n 1 201 VAL n 1 202 ALA n 1 203 HIS n 1 204 ASP n 1 205 LEU n 1 206 ASN n 1 207 ARG n 1 208 ARG n 1 209 GLY n 1 210 VAL n 1 211 LEU n 1 212 SER n 1 213 PRO n 1 214 LYS n 1 215 ASP n 1 216 TYR n 1 217 PHE n 1 218 ALA n 1 219 GLN n 1 220 LEU n 1 221 GLN n 1 222 GLY n 1 223 ARG n 1 224 GLU n 1 225 PRO n 1 226 GLN n 1 227 GLY n 1 228 ARG n 1 229 GLU n 1 230 TRP n 1 231 SER n 1 232 ALA n 1 233 THR n 1 234 ALA n 1 235 LEU n 1 236 LYS n 1 237 ARG n 1 238 SER n 1 239 MET n 1 240 ILE n 1 241 SER n 1 242 GLU n 1 243 ALA n 1 244 MET n 1 245 LEU n 1 246 GLY n 1 247 TYR n 1 248 ALA n 1 249 THR n 1 250 LEU n 1 251 ASN n 1 252 GLY n 1 253 LYS n 1 254 THR n 1 255 VAL n 1 256 ARG n 1 257 ASP n 1 258 ASP n 1 259 ASP n 1 260 GLY n 1 261 ALA n 1 262 PRO n 1 263 LEU n 1 264 VAL n 1 265 ARG n 1 266 ALA n 1 267 GLU n 1 268 PRO n 1 269 ILE n 1 270 LEU n 1 271 THR n 1 272 ARG n 1 273 GLU n 1 274 GLN n 1 275 LEU n 1 276 GLU n 1 277 ALA n 1 278 LEU n 1 279 ARG n 1 280 ALA n 1 281 GLU n 1 282 LEU n 1 283 VAL n 1 284 LYS n 1 285 THR n 1 286 SER n 1 287 ARG n 1 288 ALA n 1 289 LYS n 1 290 PRO n 1 291 ALA n 1 292 VAL n 1 293 SER n 1 294 THR n 1 295 PRO n 1 296 SER n 1 297 LEU n 1 298 LEU n 1 299 LEU n 1 300 ARG n 1 301 VAL n 1 302 LEU n 1 303 PHE n 1 304 CYS n 1 305 ALA n 1 306 VAL n 1 307 CYS n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 ALA n 1 312 TYR n 1 313 LYS n 1 314 PHE n 1 315 ALA n 1 316 GLY n 1 317 GLY n 1 318 GLY n 1 319 ARG n 1 320 LYS n 1 321 HIS n 1 322 PRO n 1 323 ARG n 1 324 TYR n 1 325 ARG n 1 326 CYS n 1 327 ARG n 1 328 SER n 1 329 MET n 1 330 GLY n 1 331 PHE n 1 332 PRO n 1 333 LYS n 1 334 HIS n 1 335 CYS n 1 336 GLY n 1 337 ASN n 1 338 GLY n 1 339 THR n 1 340 VAL n 1 341 ALA n 1 342 MET n 1 343 ALA n 1 344 GLU n 1 345 TRP n 1 346 ASP n 1 347 ALA n 1 348 PHE n 1 349 CYS n 1 350 GLU n 1 351 GLU n 1 352 GLN n 1 353 VAL n 1 354 LEU n 1 355 ASP n 1 356 LEU n 1 357 LEU n 1 358 GLY n 1 359 ASP n 1 360 ALA n 1 361 GLU n 1 362 ARG n 1 363 LEU n 1 364 GLU n 1 365 LYS n 1 366 VAL n 1 367 TRP n 1 368 VAL n 1 369 ALA n 1 370 GLY n 1 371 SER n 1 372 ASP n 1 373 SER n 1 374 ALA n 1 375 VAL n 1 376 GLU n 1 377 LEU n 1 378 ALA n 1 379 GLU n 1 380 VAL n 1 381 ASN n 1 382 ALA n 1 383 GLU n 1 384 LEU n 1 385 VAL n 1 386 ASP n 1 387 LEU n 1 388 THR n 1 389 SER n 1 390 LEU n 1 391 ILE n 1 392 GLY n 1 393 SER n 1 394 PRO n 1 395 ALA n 1 396 TYR n 1 397 ARG n 1 398 ALA n 1 399 GLY n 1 400 SER n 1 401 PRO n 1 402 GLN n 1 403 ARG n 1 404 GLU n 1 405 ALA n 1 406 LEU n 1 407 ASP n 1 408 ALA n 1 409 ARG n 1 410 ILE n 1 411 ALA n 1 412 ALA n 1 413 LEU n 1 414 ALA n 1 415 ALA n 1 416 ARG n 1 417 GLN n 1 418 GLU n 1 419 GLU n 1 420 LEU n 1 421 GLU n 1 422 GLY n 1 423 LEU n 1 424 GLU n 1 425 ALA n 1 426 ARG n 1 427 PRO n 1 428 SER n 1 429 GLY n 1 430 TRP n 1 431 GLU n 1 432 TRP n 1 433 ARG n 1 434 GLU n 1 435 THR n 1 436 GLY n 1 437 GLN n 1 438 ARG n 1 439 PHE n 1 440 GLY n 1 441 ASP n 1 442 TRP n 1 443 TRP n 1 444 ARG n 1 445 GLU n 1 446 GLN n 1 447 ASP n 1 448 THR n 1 449 ALA n 1 450 ALA n 1 451 LYS n 1 452 ASN n 1 453 THR n 1 454 TRP n 1 455 LEU n 1 456 ARG n 1 457 SER n 1 458 MET n 1 459 ASN n 1 460 VAL n 1 461 ARG n 1 462 LEU n 1 463 THR n 1 464 PHE n 1 465 ASP n 1 466 VAL n 1 467 ARG n 1 468 GLY n 1 469 GLY n 1 470 LEU n 1 471 THR n 1 472 ARG n 1 473 THR n 1 474 ILE n 1 475 ASP n 1 476 PHE n 1 477 GLY n 1 478 ASP n 1 479 LEU n 1 480 GLN n 1 481 GLU n 1 482 TYR n 1 483 GLU n 1 484 GLN n 1 485 HIS n 1 486 LEU n 1 487 ARG n 1 488 LEU n 1 489 GLY n 1 490 SER n 1 491 VAL n 1 492 VAL n 1 493 GLU n 1 494 ARG n 1 495 LEU n 1 496 HIS n 1 497 THR n 1 498 GLY n 1 499 MET n 1 500 SER n 2 1 DG n 2 2 DT n 2 3 DG n 2 4 DG n 2 5 DT n 2 6 DT n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DT n 2 12 DG n 2 13 DG n 2 14 DT n 2 15 DC n 2 16 DA n 2 17 DA n 2 18 DC n 2 19 DC n 2 20 DA n 2 21 DC n 2 22 DC n 2 23 DG n 2 24 DC n 2 25 DG n 2 26 DG n 2 27 DT n 2 28 DC n 2 29 DT n 2 30 DC n 2 31 DA n 2 32 DG n 2 33 DT n 2 34 DG n 2 35 DG n 2 36 DT n 2 37 DG n 2 38 DT n 2 39 DA n 2 40 DC n 2 41 DG n 2 42 DG n 2 43 DT n 2 44 DA n 2 45 DC n 2 46 DA n 2 47 DA n 2 48 DA n 2 49 DC n 2 50 DC n 2 51 DC n 2 52 DA n 3 1 DT n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DT n 3 6 DT n 3 7 DT n 3 8 DG n 3 9 DT n 3 10 DA n 3 11 DC n 3 12 DC n 3 13 DG n 3 14 DT n 3 15 DA n 3 16 DC n 3 17 DA n 3 18 DC n 3 19 DC n 3 20 DA n 3 21 DC n 3 22 DT n 3 23 DG n 3 24 DA n 3 25 DG n 3 26 DA n 3 27 DC n 3 28 DC n 3 29 DG n 3 30 DC n 3 31 DG n 3 32 DG n 3 33 DT n 3 34 DG n 3 35 DG n 3 36 DT n 3 37 DT n 3 38 DG n 3 39 DA n 3 40 DC n 3 41 DC n 3 42 DA n 3 43 DG n 3 44 DA n 3 45 DC n 3 46 DA n 3 47 DA n 3 48 DA n 3 49 DC n 3 50 DC n 3 51 DA n 3 52 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 500 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene '35, PBI_BXB1_35' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium phage Bxb1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2902907 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 52 'Mycobacterium phage Bxb1' ? 2902907 ? 3 1 sample 1 52 'Mycobacterium phage Bxb1' ? 2902907 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ARG 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 LEU 4 4 ? ? ? A . n A 1 5 VAL 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 ILE 7 7 ? ? ? A . n A 1 8 ARG 8 8 ? ? ? A . n A 1 9 LEU 9 9 ? ? ? A . n A 1 10 SER 10 10 ? ? ? A . n A 1 11 ARG 11 11 ? ? ? A . n A 1 12 VAL 12 12 ? ? ? A . n A 1 13 THR 13 13 ? ? ? A . n A 1 14 ASP 14 14 ? ? ? A . n A 1 15 ALA 15 15 ? ? ? A . n A 1 16 THR 16 16 ? ? ? A . n A 1 17 THR 17 17 ? ? ? A . n A 1 18 SER 18 18 ? ? ? A . n A 1 19 PRO 19 19 ? ? ? A . n A 1 20 GLU 20 20 ? ? ? A . n A 1 21 ARG 21 21 ? ? ? A . n A 1 22 GLN 22 22 ? ? ? A . n A 1 23 LEU 23 23 ? ? ? A . n A 1 24 GLU 24 24 ? ? ? A . n A 1 25 SER 25 25 ? ? ? A . n A 1 26 CYS 26 26 ? ? ? A . n A 1 27 GLN 27 27 ? ? ? A . n A 1 28 GLN 28 28 ? ? ? A . n A 1 29 LEU 29 29 ? ? ? A . n A 1 30 CYS 30 30 ? ? ? A . n A 1 31 ALA 31 31 ? ? ? A . n A 1 32 GLN 32 32 ? ? ? A . n A 1 33 ARG 33 33 ? ? ? A . n A 1 34 GLY 34 34 ? ? ? A . n A 1 35 TRP 35 35 ? ? ? A . n A 1 36 ASP 36 36 ? ? ? A . n A 1 37 VAL 37 37 ? ? ? A . n A 1 38 VAL 38 38 ? ? ? A . n A 1 39 GLY 39 39 ? ? ? A . n A 1 40 VAL 40 40 ? ? ? A . n A 1 41 ALA 41 41 ? ? ? A . n A 1 42 GLU 42 42 ? ? ? A . n A 1 43 ASP 43 43 ? ? ? A . n A 1 44 LEU 44 44 ? ? ? A . n A 1 45 ASP 45 45 ? ? ? A . n A 1 46 VAL 46 46 ? ? ? A . n A 1 47 SER 47 47 ? ? ? A . n A 1 48 GLY 48 48 ? ? ? A . n A 1 49 ALA 49 49 ? ? ? A . n A 1 50 VAL 50 50 ? ? ? A . n A 1 51 ASP 51 51 ? ? ? A . n A 1 52 PRO 52 52 ? ? ? A . n A 1 53 PHE 53 53 ? ? ? A . n A 1 54 ASP 54 54 ? ? ? A . n A 1 55 ARG 55 55 ? ? ? A . n A 1 56 LYS 56 56 ? ? ? A . n A 1 57 ARG 57 57 ? ? ? A . n A 1 58 ARG 58 58 ? ? ? A . n A 1 59 PRO 59 59 ? ? ? A . n A 1 60 ASN 60 60 ? ? ? A . n A 1 61 LEU 61 61 ? ? ? A . n A 1 62 ALA 62 62 ? ? ? A . n A 1 63 ARG 63 63 ? ? ? A . n A 1 64 TRP 64 64 ? ? ? A . n A 1 65 LEU 65 65 ? ? ? A . n A 1 66 ALA 66 66 ? ? ? A . n A 1 67 PHE 67 67 ? ? ? A . n A 1 68 GLU 68 68 ? ? ? A . n A 1 69 GLU 69 69 ? ? ? A . n A 1 70 GLN 70 70 ? ? ? A . n A 1 71 PRO 71 71 ? ? ? A . n A 1 72 PHE 72 72 ? ? ? A . n A 1 73 ASP 73 73 ? ? ? A . n A 1 74 VAL 74 74 ? ? ? A . n A 1 75 ILE 75 75 ? ? ? A . n A 1 76 VAL 76 76 ? ? ? A . n A 1 77 ALA 77 77 ? ? ? A . n A 1 78 TYR 78 78 ? ? ? A . n A 1 79 ARG 79 79 ? ? ? A . n A 1 80 VAL 80 80 ? ? ? A . n A 1 81 ASP 81 81 ? ? ? A . n A 1 82 ARG 82 82 ? ? ? A . n A 1 83 LEU 83 83 ? ? ? A . n A 1 84 THR 84 84 ? ? ? A . n A 1 85 ARG 85 85 ? ? ? A . n A 1 86 SER 86 86 ? ? ? A . n A 1 87 ILE 87 87 ? ? ? A . n A 1 88 ARG 88 88 ? ? ? A . n A 1 89 HIS 89 89 ? ? ? A . n A 1 90 LEU 90 90 ? ? ? A . n A 1 91 GLN 91 91 ? ? ? A . n A 1 92 GLN 92 92 ? ? ? A . n A 1 93 LEU 93 93 ? ? ? A . n A 1 94 VAL 94 94 ? ? ? A . n A 1 95 HIS 95 95 ? ? ? A . n A 1 96 TRP 96 96 ? ? ? A . n A 1 97 ALA 97 97 ? ? ? A . n A 1 98 GLU 98 98 ? ? ? A . n A 1 99 ASP 99 99 ? ? ? A . n A 1 100 HIS 100 100 ? ? ? A . n A 1 101 LYS 101 101 ? ? ? A . n A 1 102 LYS 102 102 ? ? ? A . n A 1 103 LEU 103 103 ? ? ? A . n A 1 104 VAL 104 104 ? ? ? A . n A 1 105 VAL 105 105 ? ? ? A . n A 1 106 SER 106 106 ? ? ? A . n A 1 107 ALA 107 107 ? ? ? A . n A 1 108 THR 108 108 ? ? ? A . n A 1 109 GLU 109 109 ? ? ? A . n A 1 110 ALA 110 110 ? ? ? A . n A 1 111 HIS 111 111 ? ? ? A . n A 1 112 PHE 112 112 ? ? ? A . n A 1 113 ASP 113 113 ? ? ? A . n A 1 114 THR 114 114 ? ? ? A . n A 1 115 THR 115 115 ? ? ? A . n A 1 116 THR 116 116 ? ? ? A . n A 1 117 PRO 117 117 ? ? ? A . n A 1 118 PHE 118 118 ? ? ? A . n A 1 119 ALA 119 119 ? ? ? A . n A 1 120 ALA 120 120 ? ? ? A . n A 1 121 VAL 121 121 ? ? ? A . n A 1 122 VAL 122 122 ? ? ? A . n A 1 123 ILE 123 123 ? ? ? A . n A 1 124 ALA 124 124 ? ? ? A . n A 1 125 LEU 125 125 ? ? ? A . n A 1 126 MET 126 126 ? ? ? A . n A 1 127 GLY 127 127 ? ? ? A . n A 1 128 THR 128 128 ? ? ? A . n A 1 129 VAL 129 129 ? ? ? A . n A 1 130 ALA 130 130 ? ? ? A . n A 1 131 GLN 131 131 ? ? ? A . n A 1 132 MET 132 132 ? ? ? A . n A 1 133 GLU 133 133 ? ? ? A . n A 1 134 LEU 134 134 ? ? ? A . n A 1 135 GLU 135 135 ? ? ? A . n A 1 136 ALA 136 136 ? ? ? A . n A 1 137 ILE 137 137 ? ? ? A . n A 1 138 LYS 138 138 ? ? ? A . n A 1 139 GLU 139 139 ? ? ? A . n A 1 140 ARG 140 140 ? ? ? A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 TRP 161 161 161 TRP TRP A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 TYR 163 163 163 TYR TYR A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 ASP 169 169 ? ? ? A . n A 1 170 GLY 170 170 ? ? ? A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 TRP 172 172 172 TRP TRP A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 PRO 176 176 176 PRO PRO A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 HIS 189 189 189 HIS HIS A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 HIS 195 195 195 HIS HIS A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 PRO 197 197 197 PRO PRO A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 HIS 199 199 199 HIS HIS A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 ARG 207 207 207 ARG ARG A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ASP 215 215 215 ASP ASP A . n A 1 216 TYR 216 216 216 TYR TYR A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 GLN 221 221 221 GLN GLN A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 PRO 225 225 225 PRO PRO A . n A 1 226 GLN 226 226 226 GLN GLN A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 ARG 228 228 228 ARG ARG A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 TRP 230 230 230 TRP TRP A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 LEU 235 235 235 LEU LEU A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 MET 239 239 239 MET MET A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 SER 241 241 241 SER SER A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 ALA 243 243 243 ALA ALA A . n A 1 244 MET 244 244 244 MET MET A . n A 1 245 LEU 245 245 245 LEU LEU A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 TYR 247 247 247 TYR TYR A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 ASN 251 251 251 ASN ASN A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 LYS 253 253 253 LYS LYS A . n A 1 254 THR 254 254 254 THR THR A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 ASP 257 257 257 ASP ASP A . n A 1 258 ASP 258 258 258 ASP ASP A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 PRO 262 262 262 PRO PRO A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 VAL 264 264 264 VAL VAL A . n A 1 265 ARG 265 265 265 ARG ARG A . n A 1 266 ALA 266 266 266 ALA ALA A . n A 1 267 GLU 267 267 267 GLU GLU A . n A 1 268 PRO 268 268 268 PRO PRO A . n A 1 269 ILE 269 269 269 ILE ILE A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 THR 271 271 271 THR THR A . n A 1 272 ARG 272 272 272 ARG ARG A . n A 1 273 GLU 273 273 273 GLU GLU A . n A 1 274 GLN 274 274 274 GLN GLN A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 ALA 277 277 277 ALA ALA A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 ARG 279 279 279 ARG ARG A . n A 1 280 ALA 280 280 280 ALA ALA A . n A 1 281 GLU 281 281 281 GLU GLU A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 VAL 283 283 283 VAL VAL A . n A 1 284 LYS 284 284 284 LYS LYS A . n A 1 285 THR 285 285 285 THR THR A . n A 1 286 SER 286 286 286 SER SER A . n A 1 287 ARG 287 287 287 ARG ARG A . n A 1 288 ALA 288 288 288 ALA ALA A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 PRO 290 290 290 PRO PRO A . n A 1 291 ALA 291 291 291 ALA ALA A . n A 1 292 VAL 292 292 292 VAL VAL A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 THR 294 294 294 THR THR A . n A 1 295 PRO 295 295 295 PRO PRO A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 LEU 299 299 299 LEU LEU A . n A 1 300 ARG 300 300 300 ARG ARG A . n A 1 301 VAL 301 301 301 VAL VAL A . n A 1 302 LEU 302 302 302 LEU LEU A . n A 1 303 PHE 303 303 303 PHE PHE A . n A 1 304 CYS 304 304 304 CYS CYS A . n A 1 305 ALA 305 305 305 ALA ALA A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 CYS 307 307 307 CYS CYS A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 ALA 311 311 311 ALA ALA A . n A 1 312 TYR 312 312 312 TYR TYR A . n A 1 313 LYS 313 313 313 LYS LYS A . n A 1 314 PHE 314 314 314 PHE PHE A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 GLY 316 316 316 GLY GLY A . n A 1 317 GLY 317 317 317 GLY GLY A . n A 1 318 GLY 318 318 318 GLY GLY A . n A 1 319 ARG 319 319 319 ARG ARG A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 HIS 321 321 321 HIS HIS A . n A 1 322 PRO 322 322 322 PRO PRO A . n A 1 323 ARG 323 323 323 ARG ARG A . n A 1 324 TYR 324 324 324 TYR TYR A . n A 1 325 ARG 325 325 325 ARG ARG A . n A 1 326 CYS 326 326 326 CYS CYS A . n A 1 327 ARG 327 327 327 ARG ARG A . n A 1 328 SER 328 328 328 SER SER A . n A 1 329 MET 329 329 329 MET MET A . n A 1 330 GLY 330 330 330 GLY GLY A . n A 1 331 PHE 331 331 331 PHE PHE A . n A 1 332 PRO 332 332 332 PRO PRO A . n A 1 333 LYS 333 333 333 LYS LYS A . n A 1 334 HIS 334 334 334 HIS HIS A . n A 1 335 CYS 335 335 335 CYS CYS A . n A 1 336 GLY 336 336 336 GLY GLY A . n A 1 337 ASN 337 337 337 ASN ASN A . n A 1 338 GLY 338 338 338 GLY GLY A . n A 1 339 THR 339 339 339 THR THR A . n A 1 340 VAL 340 340 340 VAL VAL A . n A 1 341 ALA 341 341 341 ALA ALA A . n A 1 342 MET 342 342 342 MET MET A . n A 1 343 ALA 343 343 343 ALA ALA A . n A 1 344 GLU 344 344 344 GLU GLU A . n A 1 345 TRP 345 345 345 TRP TRP A . n A 1 346 ASP 346 346 346 ASP ASP A . n A 1 347 ALA 347 347 347 ALA ALA A . n A 1 348 PHE 348 348 348 PHE PHE A . n A 1 349 CYS 349 349 349 CYS CYS A . n A 1 350 GLU 350 350 350 GLU GLU A . n A 1 351 GLU 351 351 351 GLU GLU A . n A 1 352 GLN 352 352 352 GLN GLN A . n A 1 353 VAL 353 353 353 VAL VAL A . n A 1 354 LEU 354 354 354 LEU LEU A . n A 1 355 ASP 355 355 355 ASP ASP A . n A 1 356 LEU 356 356 356 LEU LEU A . n A 1 357 LEU 357 357 357 LEU LEU A . n A 1 358 GLY 358 358 358 GLY GLY A . n A 1 359 ASP 359 359 359 ASP ASP A . n A 1 360 ALA 360 360 360 ALA ALA A . n A 1 361 GLU 361 361 361 GLU GLU A . n A 1 362 ARG 362 362 362 ARG ARG A . n A 1 363 LEU 363 363 363 LEU LEU A . n A 1 364 GLU 364 364 364 GLU GLU A . n A 1 365 LYS 365 365 365 LYS LYS A . n A 1 366 VAL 366 366 366 VAL VAL A . n A 1 367 TRP 367 367 367 TRP TRP A . n A 1 368 VAL 368 368 368 VAL VAL A . n A 1 369 ALA 369 369 369 ALA ALA A . n A 1 370 GLY 370 370 370 GLY GLY A . n A 1 371 SER 371 371 371 SER SER A . n A 1 372 ASP 372 372 372 ASP ASP A . n A 1 373 SER 373 373 373 SER SER A . n A 1 374 ALA 374 374 374 ALA ALA A . n A 1 375 VAL 375 375 375 VAL VAL A . n A 1 376 GLU 376 376 376 GLU GLU A . n A 1 377 LEU 377 377 377 LEU LEU A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 GLU 379 379 379 GLU GLU A . n A 1 380 VAL 380 380 380 VAL VAL A . n A 1 381 ASN 381 381 381 ASN ASN A . n A 1 382 ALA 382 382 382 ALA ALA A . n A 1 383 GLU 383 383 383 GLU GLU A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 VAL 385 385 385 VAL VAL A . n A 1 386 ASP 386 386 386 ASP ASP A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 THR 388 388 388 THR THR A . n A 1 389 SER 389 389 389 SER SER A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 ILE 391 391 ? ? ? A . n A 1 392 GLY 392 392 ? ? ? A . n A 1 393 SER 393 393 ? ? ? A . n A 1 394 PRO 394 394 ? ? ? A . n A 1 395 ALA 395 395 ? ? ? A . n A 1 396 TYR 396 396 ? ? ? A . n A 1 397 ARG 397 397 ? ? ? A . n A 1 398 ALA 398 398 ? ? ? A . n A 1 399 GLY 399 399 ? ? ? A . n A 1 400 SER 400 400 ? ? ? A . n A 1 401 PRO 401 401 ? ? ? A . n A 1 402 GLN 402 402 ? ? ? A . n A 1 403 ARG 403 403 ? ? ? A . n A 1 404 GLU 404 404 ? ? ? A . n A 1 405 ALA 405 405 ? ? ? A . n A 1 406 LEU 406 406 ? ? ? A . n A 1 407 ASP 407 407 ? ? ? A . n A 1 408 ALA 408 408 ? ? ? A . n A 1 409 ARG 409 409 ? ? ? A . n A 1 410 ILE 410 410 ? ? ? A . n A 1 411 ALA 411 411 ? ? ? A . n A 1 412 ALA 412 412 ? ? ? A . n A 1 413 LEU 413 413 ? ? ? A . n A 1 414 ALA 414 414 ? ? ? A . n A 1 415 ALA 415 415 ? ? ? A . n A 1 416 ARG 416 416 416 ARG ARG A . n A 1 417 GLN 417 417 417 GLN GLN A . n A 1 418 GLU 418 418 418 GLU GLU A . n A 1 419 GLU 419 419 419 GLU GLU A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 GLU 421 421 421 GLU GLU A . n A 1 422 GLY 422 422 422 GLY GLY A . n A 1 423 LEU 423 423 423 LEU LEU A . n A 1 424 GLU 424 424 424 GLU GLU A . n A 1 425 ALA 425 425 425 ALA ALA A . n A 1 426 ARG 426 426 426 ARG ARG A . n A 1 427 PRO 427 427 427 PRO PRO A . n A 1 428 SER 428 428 428 SER SER A . n A 1 429 GLY 429 429 429 GLY GLY A . n A 1 430 TRP 430 430 430 TRP TRP A . n A 1 431 GLU 431 431 431 GLU GLU A . n A 1 432 TRP 432 432 432 TRP TRP A . n A 1 433 ARG 433 433 433 ARG ARG A . n A 1 434 GLU 434 434 434 GLU GLU A . n A 1 435 THR 435 435 435 THR THR A . n A 1 436 GLY 436 436 436 GLY GLY A . n A 1 437 GLN 437 437 437 GLN GLN A . n A 1 438 ARG 438 438 438 ARG ARG A . n A 1 439 PHE 439 439 439 PHE PHE A . n A 1 440 GLY 440 440 440 GLY GLY A . n A 1 441 ASP 441 441 441 ASP ASP A . n A 1 442 TRP 442 442 442 TRP TRP A . n A 1 443 TRP 443 443 443 TRP TRP A . n A 1 444 ARG 444 444 444 ARG ARG A . n A 1 445 GLU 445 445 445 GLU GLU A . n A 1 446 GLN 446 446 446 GLN GLN A . n A 1 447 ASP 447 447 447 ASP ASP A . n A 1 448 THR 448 448 448 THR THR A . n A 1 449 ALA 449 449 449 ALA ALA A . n A 1 450 ALA 450 450 450 ALA ALA A . n A 1 451 LYS 451 451 451 LYS LYS A . n A 1 452 ASN 452 452 452 ASN ASN A . n A 1 453 THR 453 453 453 THR THR A . n A 1 454 TRP 454 454 454 TRP TRP A . n A 1 455 LEU 455 455 455 LEU LEU A . n A 1 456 ARG 456 456 456 ARG ARG A . n A 1 457 SER 457 457 457 SER SER A . n A 1 458 MET 458 458 458 MET MET A . n A 1 459 ASN 459 459 459 ASN ASN A . n A 1 460 VAL 460 460 460 VAL VAL A . n A 1 461 ARG 461 461 461 ARG ARG A . n A 1 462 LEU 462 462 462 LEU LEU A . n A 1 463 THR 463 463 463 THR THR A . n A 1 464 PHE 464 464 464 PHE PHE A . n A 1 465 ASP 465 465 465 ASP ASP A . n A 1 466 VAL 466 466 466 VAL VAL A . n A 1 467 ARG 467 467 467 ARG ARG A . n A 1 468 GLY 468 468 468 GLY GLY A . n A 1 469 GLY 469 469 469 GLY GLY A . n A 1 470 LEU 470 470 470 LEU LEU A . n A 1 471 THR 471 471 471 THR THR A . n A 1 472 ARG 472 472 472 ARG ARG A . n A 1 473 THR 473 473 473 THR THR A . n A 1 474 ILE 474 474 474 ILE ILE A . n A 1 475 ASP 475 475 475 ASP ASP A . n A 1 476 PHE 476 476 476 PHE PHE A . n A 1 477 GLY 477 477 477 GLY GLY A . n A 1 478 ASP 478 478 478 ASP ASP A . n A 1 479 LEU 479 479 479 LEU LEU A . n A 1 480 GLN 480 480 480 GLN GLN A . n A 1 481 GLU 481 481 481 GLU GLU A . n A 1 482 TYR 482 482 482 TYR TYR A . n A 1 483 GLU 483 483 483 GLU GLU A . n A 1 484 GLN 484 484 484 GLN GLN A . n A 1 485 HIS 485 485 485 HIS HIS A . n A 1 486 LEU 486 486 486 LEU LEU A . n A 1 487 ARG 487 487 ? ? ? A . n A 1 488 LEU 488 488 ? ? ? A . n A 1 489 GLY 489 489 ? ? ? A . n A 1 490 SER 490 490 ? ? ? A . n A 1 491 VAL 491 491 ? ? ? A . n A 1 492 VAL 492 492 ? ? ? A . n A 1 493 GLU 493 493 ? ? ? A . n A 1 494 ARG 494 494 ? ? ? A . n A 1 495 LEU 495 495 ? ? ? A . n A 1 496 HIS 496 496 ? ? ? A . n A 1 497 THR 497 497 ? ? ? A . n A 1 498 GLY 498 498 ? ? ? A . n A 1 499 MET 499 499 ? ? ? A . n A 1 500 SER 500 500 ? ? ? A . n B 2 1 DG 1 1 1 DG DG E . n B 2 2 DT 2 2 2 DT DT E . n B 2 3 DG 3 3 3 DG DG E . n B 2 4 DG 4 4 4 DG DG E . n B 2 5 DT 5 5 5 DT DT E . n B 2 6 DT 6 6 6 DT DT E . n B 2 7 DT 7 7 7 DT DT E . n B 2 8 DG 8 8 8 DG DG E . n B 2 9 DT 9 9 9 DT DT E . n B 2 10 DC 10 10 10 DC DC E . n B 2 11 DT 11 11 11 DT DT E . n B 2 12 DG 12 12 12 DG DG E . n B 2 13 DG 13 13 13 DG DG E . n B 2 14 DT 14 14 14 DT DT E . n B 2 15 DC 15 15 15 DC DC E . n B 2 16 DA 16 16 16 DA DA E . n B 2 17 DA 17 17 17 DA DA E . n B 2 18 DC 18 18 18 DC DC E . n B 2 19 DC 19 19 19 DC DC E . n B 2 20 DA 20 20 20 DA DA E . n B 2 21 DC 21 21 21 DC DC E . n B 2 22 DC 22 22 22 DC DC E . n B 2 23 DG 23 23 23 DG DG E . n B 2 24 DC 24 24 24 DC DC E . n B 2 25 DG 25 25 25 DG DG E . n B 2 26 DG 26 26 ? ? ? E . n B 2 27 DT 27 27 ? ? ? E . n B 2 28 DC 28 28 ? ? ? E . n B 2 29 DT 29 29 ? ? ? E . n B 2 30 DC 30 30 ? ? ? E . n B 2 31 DA 31 31 ? ? ? E . n B 2 32 DG 32 32 ? ? ? E . n B 2 33 DT 33 33 ? ? ? E . n B 2 34 DG 34 34 ? ? ? E . n B 2 35 DG 35 35 ? ? ? E . n B 2 36 DT 36 36 ? ? ? E . n B 2 37 DG 37 37 ? ? ? E . n B 2 38 DT 38 38 ? ? ? E . n B 2 39 DA 39 39 ? ? ? E . n B 2 40 DC 40 40 ? ? ? E . n B 2 41 DG 41 41 ? ? ? E . n B 2 42 DG 42 42 ? ? ? E . n B 2 43 DT 43 43 ? ? ? E . n B 2 44 DA 44 44 ? ? ? E . n B 2 45 DC 45 45 ? ? ? E . n B 2 46 DA 46 46 ? ? ? E . n B 2 47 DA 47 47 ? ? ? E . n B 2 48 DA 48 48 ? ? ? E . n B 2 49 DC 49 49 ? ? ? E . n B 2 50 DC 50 50 ? ? ? E . n B 2 51 DC 51 51 ? ? ? E . n B 2 52 DA 52 52 ? ? ? E . n C 3 1 DT 1 1 ? ? ? F . n C 3 2 DG 2 2 ? ? ? F . n C 3 3 DG 3 3 ? ? ? F . n C 3 4 DG 4 4 ? ? ? F . n C 3 5 DT 5 5 ? ? ? F . n C 3 6 DT 6 6 ? ? ? F . n C 3 7 DT 7 7 ? ? ? F . n C 3 8 DG 8 8 ? ? ? F . n C 3 9 DT 9 9 ? ? ? F . n C 3 10 DA 10 10 ? ? ? F . n C 3 11 DC 11 11 ? ? ? F . n C 3 12 DC 12 12 ? ? ? F . n C 3 13 DG 13 13 ? ? ? F . n C 3 14 DT 14 14 ? ? ? F . n C 3 15 DA 15 15 ? ? ? F . n C 3 16 DC 16 16 ? ? ? F . n C 3 17 DA 17 17 ? ? ? F . n C 3 18 DC 18 18 ? ? ? F . n C 3 19 DC 19 19 ? ? ? F . n C 3 20 DA 20 20 ? ? ? F . n C 3 21 DC 21 21 ? ? ? F . n C 3 22 DT 22 22 ? ? ? F . n C 3 23 DG 23 23 ? ? ? F . n C 3 24 DA 24 24 ? ? ? F . n C 3 25 DG 25 25 ? ? ? F . n C 3 26 DA 26 26 ? ? ? F . n C 3 27 DC 27 27 ? ? ? F . n C 3 28 DC 28 28 28 DC DC F . n C 3 29 DG 29 29 29 DG DG F . n C 3 30 DC 30 30 30 DC DC F . n C 3 31 DG 31 31 31 DG DG F . n C 3 32 DG 32 32 32 DG DG F . n C 3 33 DT 33 33 33 DT DT F . n C 3 34 DG 34 34 34 DG DG F . n C 3 35 DG 35 35 35 DG DG F . n C 3 36 DT 36 36 36 DT DT F . n C 3 37 DT 37 37 37 DT DT F . n C 3 38 DG 38 38 38 DG DG F . n C 3 39 DA 39 39 39 DA DA F . n C 3 40 DC 40 40 40 DC DC F . n C 3 41 DC 41 41 41 DC DC F . n C 3 42 DA 42 42 42 DA DA F . n C 3 43 DG 43 43 43 DG DG F . n C 3 44 DA 44 44 44 DA DA F . n C 3 45 DC 45 45 45 DC DC F . n C 3 46 DA 46 46 46 DA DA F . n C 3 47 DA 47 47 47 DA DA F . n C 3 48 DA 48 48 48 DA DA F . n C 3 49 DC 49 49 49 DC DC F . n C 3 50 DC 50 50 50 DC DC F . n C 3 51 DA 51 51 51 DA DA F . n C 3 52 DC 52 52 52 DC DC F . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1000 _pdbx_nonpoly_scheme.auth_seq_num 1000 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9IU8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9IU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9IU8 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9IU8 _struct.title ;Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the pre-strand exchange state (attP-L) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9IU8 _struct_keywords.text 'large serine recombinase, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q9B086_BPMB1 Q9B086 ? 1 ;MRALVVIRLSRVTDATTSPERQLESCQQLCAQRGWDVVGVAEDLDVSGAVDPFDRKRRPNLARWLAFEEQPFDVIVAYRV DRLTRSIRHLQQLVHWAEDHKKLVVSATEAHFDTTTPFAAVVIALMGTVAQMELEAIKERNRSAAHFNIRAGKYRGSLPP WGYLPTRVDGEWRLVPDPVQRERILEVYHRVVDNHEPLHLVAHDLNRRGVLSPKDYFAQLQGREPQGREWSATALKRSMI SEAMLGYATLNGKTVRDDDGAPLVRAEPILTREQLEALRAELVKTSRAKPAVSTPSLLLRVLFCAVCGEPAYKFAGGGRK HPRYRCRSMGFPKHCGNGTVAMAEWDAFCEEQVLDLLGDAERLEKVWVAGSDSAVELAEVNAELVDLTSLIGSPAYRAGS PQREALDARIAALAARQEELEGLEARPSGWEWRETGQRFGDWWREQDTAAKNTWLRSMNVRLTFDVRGGLTRTIDFGDLQ EYEQHLRLGSVVERLHTGMS ; 1 2 GB NC_002656.1 12657854 ? 2 GTGGTTTGTCTGGTCAACCACCGCGGTCTCAGTGGTGTACGGTACAAACCCA 29440 3 GB NC_002656.1 12657854 ? 3 TGGGTTTGTACCGTACACCACTGAGACCGCGGTGGTTGACCAGACAAACCAC 29491 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9IU8 A 1 ? 500 ? Q9B086 1 ? 500 ? 1 500 2 2 9IU8 E 1 ? 52 ? 12657854 29440 ? 29491 ? 1 52 3 3 9IU8 F 1 ? 52 ? 12657854 29491 ? 29440 ? 1 52 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 141 ? GLY A 152 ? ASN A 141 GLY A 152 1 ? 12 HELX_P HELX_P2 AA2 ASP A 177 ? ASP A 193 ? ASP A 177 ASP A 193 1 ? 17 HELX_P HELX_P3 AA3 PRO A 197 ? GLY A 209 ? PRO A 197 GLY A 209 1 ? 13 HELX_P HELX_P4 AA4 SER A 212 ? GLY A 222 ? SER A 212 GLY A 222 1 ? 11 HELX_P HELX_P5 AA5 SER A 231 ? SER A 241 ? SER A 231 SER A 241 1 ? 11 HELX_P HELX_P6 AA6 GLU A 242 ? GLY A 246 ? GLU A 242 GLY A 246 5 ? 5 HELX_P HELX_P7 AA7 THR A 271 ? VAL A 283 ? THR A 271 VAL A 283 1 ? 13 HELX_P HELX_P8 AA8 SER A 328 ? PHE A 331 ? SER A 328 PHE A 331 5 ? 4 HELX_P HELX_P9 AA9 MET A 342 ? GLY A 358 ? MET A 342 GLY A 358 1 ? 17 HELX_P HELX_P10 AB1 SER A 371 ? THR A 388 ? SER A 371 THR A 388 1 ? 18 HELX_P HELX_P11 AB2 GLN A 417 ? LEU A 423 ? GLN A 417 LEU A 423 1 ? 7 HELX_P HELX_P12 AB3 PHE A 439 ? GLN A 446 ? PHE A 439 GLN A 446 1 ? 8 HELX_P HELX_P13 AB4 ASP A 447 ? ASN A 459 ? ASP A 447 ASN A 459 1 ? 13 HELX_P HELX_P14 AB5 ASP A 478 ? LEU A 486 ? ASP A 478 LEU A 486 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 304 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 304 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc2 metalc ? ? A CYS 307 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 307 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc3 metalc ? ? A CYS 326 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 326 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.328 ? ? metalc4 metalc ? ? A CYS 335 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 335 A ZN 1000 1_555 ? ? ? ? ? ? ? 2.334 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 52 N3 ? ? E DG 1 F DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 52 O2 ? ? E DG 1 F DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 52 N4 ? ? E DG 1 F DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 51 N1 ? ? E DT 2 F DA 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 51 N6 ? ? E DT 2 F DA 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 50 N3 ? ? E DG 3 F DC 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 50 O2 ? ? E DG 3 F DC 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 50 N4 ? ? E DG 3 F DC 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 49 N3 ? ? E DG 4 F DC 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 49 O2 ? ? E DG 4 F DC 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 49 N4 ? ? E DG 4 F DC 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 48 N1 ? ? E DT 5 F DA 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 48 N6 ? ? E DT 5 F DA 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 47 N1 ? ? E DT 6 F DA 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 47 N6 ? ? E DT 6 F DA 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 46 N1 ? ? E DT 7 F DA 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 46 N6 ? ? E DT 7 F DA 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 45 N3 ? ? E DG 8 F DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 45 O2 ? ? E DG 8 F DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 45 N4 ? ? E DG 8 F DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 44 N1 ? ? E DT 9 F DA 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 44 N6 ? ? E DT 9 F DA 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 43 N1 ? ? E DC 10 F DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 43 O6 ? ? E DC 10 F DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 43 N2 ? ? E DC 10 F DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 42 N1 ? ? E DT 11 F DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 42 N6 ? ? E DT 11 F DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 41 N3 ? ? E DG 12 F DC 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 41 O2 ? ? E DG 12 F DC 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 41 N4 ? ? E DG 12 F DC 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 40 N3 ? ? E DG 13 F DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 40 O2 ? ? E DG 13 F DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 40 N4 ? ? E DG 13 F DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DT 14 N3 ? ? ? 1_555 C DA 39 N1 ? ? E DT 14 F DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DT 14 O4 ? ? ? 1_555 C DA 39 N6 ? ? E DT 14 F DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 38 N1 ? ? E DC 15 F DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 38 O6 ? ? E DC 15 F DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 38 N2 ? ? E DC 15 F DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DA 16 N1 ? ? ? 1_555 C DT 37 N3 ? ? E DA 16 F DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DA 16 N6 ? ? ? 1_555 C DT 37 O4 ? ? E DA 16 F DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DA 17 N1 ? ? ? 1_555 C DT 36 N3 ? ? E DA 17 F DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DA 17 N6 ? ? ? 1_555 C DT 36 O4 ? ? E DA 17 F DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DC 18 N3 ? ? ? 1_555 C DG 35 N1 ? ? E DC 18 F DG 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DC 18 N4 ? ? ? 1_555 C DG 35 O6 ? ? E DC 18 F DG 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DC 18 O2 ? ? ? 1_555 C DG 35 N2 ? ? E DC 18 F DG 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DC 19 N3 ? ? ? 1_555 C DG 34 N1 ? ? E DC 19 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DC 19 N4 ? ? ? 1_555 C DG 34 O6 ? ? E DC 19 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DC 19 O2 ? ? ? 1_555 C DG 34 N2 ? ? E DC 19 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DA 20 N1 ? ? ? 1_555 C DT 33 N3 ? ? E DA 20 F DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DA 20 N6 ? ? ? 1_555 C DT 33 O4 ? ? E DA 20 F DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DC 21 N3 ? ? ? 1_555 C DG 32 N1 ? ? E DC 21 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DC 21 N4 ? ? ? 1_555 C DG 32 O6 ? ? E DC 21 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DC 21 O2 ? ? ? 1_555 C DG 32 N2 ? ? E DC 21 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DC 22 N3 ? ? ? 1_555 C DG 31 N1 ? ? E DC 22 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DC 22 N4 ? ? ? 1_555 C DG 31 O6 ? ? E DC 22 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DC 22 O2 ? ? ? 1_555 C DG 31 N2 ? ? E DC 22 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DG 23 N1 ? ? ? 1_555 C DC 30 N3 ? ? E DG 23 F DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DG 23 N2 ? ? ? 1_555 C DC 30 O2 ? ? E DG 23 F DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DG 23 O6 ? ? ? 1_555 C DC 30 N4 ? ? E DG 23 F DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DC 24 N3 ? ? ? 1_555 C DG 29 N1 ? ? E DC 24 F DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DC 24 N4 ? ? ? 1_555 C DG 29 O6 ? ? E DC 24 F DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DC 24 O2 ? ? ? 1_555 C DG 29 N2 ? ? E DC 24 F DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B DG 25 N1 ? ? ? 1_555 C DC 28 N3 ? ? E DG 25 F DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B DG 25 N2 ? ? ? 1_555 C DC 28 O2 ? ? E DG 25 F DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B DG 25 O6 ? ? ? 1_555 C DC 28 N4 ? ? E DG 25 F DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 304 ? A CYS 304 ? 1_555 ZN ? D ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 307 ? A CYS 307 ? 1_555 105.1 ? 2 SG ? A CYS 304 ? A CYS 304 ? 1_555 ZN ? D ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 326 ? A CYS 326 ? 1_555 105.2 ? 3 SG ? A CYS 307 ? A CYS 307 ? 1_555 ZN ? D ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 326 ? A CYS 326 ? 1_555 93.1 ? 4 SG ? A CYS 304 ? A CYS 304 ? 1_555 ZN ? D ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 335 ? A CYS 335 ? 1_555 111.2 ? 5 SG ? A CYS 307 ? A CYS 307 ? 1_555 ZN ? D ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 335 ? A CYS 335 ? 1_555 126.3 ? 6 SG ? A CYS 326 ? A CYS 326 ? 1_555 ZN ? D ZN . ? A ZN 1000 ? 1_555 SG ? A CYS 335 ? A CYS 335 ? 1_555 113.2 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 163 ? THR A 166 ? TYR A 163 THR A 166 AA1 2 ARG A 173 ? PRO A 176 ? ARG A 173 PRO A 176 AA2 1 THR A 249 ? LEU A 250 ? THR A 249 LEU A 250 AA2 2 LYS A 253 ? THR A 254 ? LYS A 253 THR A 254 AA3 1 LEU A 302 ? CYS A 304 ? LEU A 302 CYS A 304 AA3 2 ARG A 461 ? ASP A 465 ? ARG A 461 ASP A 465 AA3 3 THR A 471 ? ASP A 475 ? THR A 471 ASP A 475 AA4 1 ALA A 311 ? ALA A 315 ? ALA A 311 ALA A 315 AA4 2 PRO A 322 ? CYS A 326 ? PRO A 322 CYS A 326 AA4 3 VAL A 340 ? ALA A 341 ? VAL A 340 ALA A 341 AA5 1 GLU A 361 ? VAL A 368 ? GLU A 361 VAL A 368 AA5 2 GLY A 429 ? ARG A 438 ? GLY A 429 ARG A 438 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 166 ? N THR A 166 O ARG A 173 ? O ARG A 173 AA2 1 2 N LEU A 250 ? N LEU A 250 O LYS A 253 ? O LYS A 253 AA3 1 2 N PHE A 303 ? N PHE A 303 O LEU A 462 ? O LEU A 462 AA3 2 3 N ARG A 461 ? N ARG A 461 O ASP A 475 ? O ASP A 475 AA4 1 2 N TYR A 312 ? N TYR A 312 O ARG A 325 ? O ARG A 325 AA4 2 3 N TYR A 324 ? N TYR A 324 O VAL A 340 ? O VAL A 340 AA5 1 2 N ARG A 362 ? N ARG A 362 O GLN A 437 ? O GLN A 437 # _pdbx_entry_details.entry_id 9IU8 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N1 _pdbx_validate_rmsd_bond.auth_asym_id_1 F _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 30 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C6 _pdbx_validate_rmsd_bond.auth_asym_id_2 F _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 30 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.331 _pdbx_validate_rmsd_bond.bond_target_value 1.367 _pdbx_validate_rmsd_bond.bond_deviation -0.036 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 155 ? ? CZ A ARG 155 ? ? NH1 A ARG 155 ? ? 116.77 120.30 -3.53 0.50 N 2 1 "O4'" E DG 8 ? ? "C1'" E DG 8 ? ? N9 E DG 8 ? ? 110.42 108.30 2.12 0.30 N 3 1 "O4'" F DG 31 ? ? "C1'" F DG 31 ? ? "C2'" F DG 31 ? ? 100.89 105.90 -5.01 0.80 N 4 1 "O4'" F DG 31 ? ? "C1'" F DG 31 ? ? N9 F DG 31 ? ? 110.23 108.30 1.93 0.30 N 5 1 "O3'" F DG 32 ? ? P F DT 33 ? ? "O5'" F DT 33 ? ? 90.83 104.00 -13.17 1.90 Y 6 1 "O4'" F DT 33 ? ? "C1'" F DT 33 ? ? N1 F DT 33 ? ? 111.83 108.30 3.53 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 157 ? ? 73.78 -175.74 2 1 VAL A 301 ? ? -135.46 -51.60 3 1 LYS A 320 ? ? 59.05 77.45 4 1 ARG A 426 ? ? 37.69 79.08 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 237 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.092 _pdbx_validate_planes.type 'SIDE CHAIN' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9IU8 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9IU8 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.21 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 266035 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'The large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the pre-strand exchange state (attP-L)' ? ? ? '1, 2, 3' 2 1 RECOMBINANT COMPLEX 'large serine recombinase' ? ? ? 1 3 1 SYNTHETIC COMPLEX attP ? ? ? 2,3 # _em_imaging.entry_id 9IU8 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9IU8 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9IU8 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9IU8 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ARG 2 ? A ARG 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A LEU 4 ? A LEU 4 5 1 Y 1 A VAL 5 ? A VAL 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A ILE 7 ? A ILE 7 8 1 Y 1 A ARG 8 ? A ARG 8 9 1 Y 1 A LEU 9 ? A LEU 9 10 1 Y 1 A SER 10 ? A SER 10 11 1 Y 1 A ARG 11 ? A ARG 11 12 1 Y 1 A VAL 12 ? A VAL 12 13 1 Y 1 A THR 13 ? A THR 13 14 1 Y 1 A ASP 14 ? A ASP 14 15 1 Y 1 A ALA 15 ? A ALA 15 16 1 Y 1 A THR 16 ? A THR 16 17 1 Y 1 A THR 17 ? A THR 17 18 1 Y 1 A SER 18 ? A SER 18 19 1 Y 1 A PRO 19 ? A PRO 19 20 1 Y 1 A GLU 20 ? A GLU 20 21 1 Y 1 A ARG 21 ? A ARG 21 22 1 Y 1 A GLN 22 ? A GLN 22 23 1 Y 1 A LEU 23 ? A LEU 23 24 1 Y 1 A GLU 24 ? A GLU 24 25 1 Y 1 A SER 25 ? A SER 25 26 1 Y 1 A CYS 26 ? A CYS 26 27 1 Y 1 A GLN 27 ? A GLN 27 28 1 Y 1 A GLN 28 ? A GLN 28 29 1 Y 1 A LEU 29 ? A LEU 29 30 1 Y 1 A CYS 30 ? A CYS 30 31 1 Y 1 A ALA 31 ? A ALA 31 32 1 Y 1 A GLN 32 ? A GLN 32 33 1 Y 1 A ARG 33 ? A ARG 33 34 1 Y 1 A GLY 34 ? A GLY 34 35 1 Y 1 A TRP 35 ? A TRP 35 36 1 Y 1 A ASP 36 ? A ASP 36 37 1 Y 1 A VAL 37 ? A VAL 37 38 1 Y 1 A VAL 38 ? A VAL 38 39 1 Y 1 A GLY 39 ? A GLY 39 40 1 Y 1 A VAL 40 ? A VAL 40 41 1 Y 1 A ALA 41 ? A ALA 41 42 1 Y 1 A GLU 42 ? A GLU 42 43 1 Y 1 A ASP 43 ? A ASP 43 44 1 Y 1 A LEU 44 ? A LEU 44 45 1 Y 1 A ASP 45 ? A ASP 45 46 1 Y 1 A VAL 46 ? A VAL 46 47 1 Y 1 A SER 47 ? A SER 47 48 1 Y 1 A GLY 48 ? A GLY 48 49 1 Y 1 A ALA 49 ? A ALA 49 50 1 Y 1 A VAL 50 ? A VAL 50 51 1 Y 1 A ASP 51 ? A ASP 51 52 1 Y 1 A PRO 52 ? A PRO 52 53 1 Y 1 A PHE 53 ? A PHE 53 54 1 Y 1 A ASP 54 ? A ASP 54 55 1 Y 1 A ARG 55 ? A ARG 55 56 1 Y 1 A LYS 56 ? A LYS 56 57 1 Y 1 A ARG 57 ? A ARG 57 58 1 Y 1 A ARG 58 ? A ARG 58 59 1 Y 1 A PRO 59 ? A PRO 59 60 1 Y 1 A ASN 60 ? A ASN 60 61 1 Y 1 A LEU 61 ? A LEU 61 62 1 Y 1 A ALA 62 ? A ALA 62 63 1 Y 1 A ARG 63 ? A ARG 63 64 1 Y 1 A TRP 64 ? A TRP 64 65 1 Y 1 A LEU 65 ? A LEU 65 66 1 Y 1 A ALA 66 ? A ALA 66 67 1 Y 1 A PHE 67 ? A PHE 67 68 1 Y 1 A GLU 68 ? A GLU 68 69 1 Y 1 A GLU 69 ? A GLU 69 70 1 Y 1 A GLN 70 ? A GLN 70 71 1 Y 1 A PRO 71 ? A PRO 71 72 1 Y 1 A PHE 72 ? A PHE 72 73 1 Y 1 A ASP 73 ? A ASP 73 74 1 Y 1 A VAL 74 ? A VAL 74 75 1 Y 1 A ILE 75 ? A ILE 75 76 1 Y 1 A VAL 76 ? A VAL 76 77 1 Y 1 A ALA 77 ? A ALA 77 78 1 Y 1 A TYR 78 ? A TYR 78 79 1 Y 1 A ARG 79 ? A ARG 79 80 1 Y 1 A VAL 80 ? A VAL 80 81 1 Y 1 A ASP 81 ? A ASP 81 82 1 Y 1 A ARG 82 ? A ARG 82 83 1 Y 1 A LEU 83 ? A LEU 83 84 1 Y 1 A THR 84 ? A THR 84 85 1 Y 1 A ARG 85 ? A ARG 85 86 1 Y 1 A SER 86 ? A SER 86 87 1 Y 1 A ILE 87 ? A ILE 87 88 1 Y 1 A ARG 88 ? A ARG 88 89 1 Y 1 A HIS 89 ? A HIS 89 90 1 Y 1 A LEU 90 ? A LEU 90 91 1 Y 1 A GLN 91 ? A GLN 91 92 1 Y 1 A GLN 92 ? A GLN 92 93 1 Y 1 A LEU 93 ? A LEU 93 94 1 Y 1 A VAL 94 ? A VAL 94 95 1 Y 1 A HIS 95 ? A HIS 95 96 1 Y 1 A TRP 96 ? A TRP 96 97 1 Y 1 A ALA 97 ? A ALA 97 98 1 Y 1 A GLU 98 ? A GLU 98 99 1 Y 1 A ASP 99 ? A ASP 99 100 1 Y 1 A HIS 100 ? A HIS 100 101 1 Y 1 A LYS 101 ? A LYS 101 102 1 Y 1 A LYS 102 ? A LYS 102 103 1 Y 1 A LEU 103 ? A LEU 103 104 1 Y 1 A VAL 104 ? A VAL 104 105 1 Y 1 A VAL 105 ? A VAL 105 106 1 Y 1 A SER 106 ? A SER 106 107 1 Y 1 A ALA 107 ? A ALA 107 108 1 Y 1 A THR 108 ? A THR 108 109 1 Y 1 A GLU 109 ? A GLU 109 110 1 Y 1 A ALA 110 ? A ALA 110 111 1 Y 1 A HIS 111 ? A HIS 111 112 1 Y 1 A PHE 112 ? A PHE 112 113 1 Y 1 A ASP 113 ? A ASP 113 114 1 Y 1 A THR 114 ? A THR 114 115 1 Y 1 A THR 115 ? A THR 115 116 1 Y 1 A THR 116 ? A THR 116 117 1 Y 1 A PRO 117 ? A PRO 117 118 1 Y 1 A PHE 118 ? A PHE 118 119 1 Y 1 A ALA 119 ? A ALA 119 120 1 Y 1 A ALA 120 ? A ALA 120 121 1 Y 1 A VAL 121 ? A VAL 121 122 1 Y 1 A VAL 122 ? A VAL 122 123 1 Y 1 A ILE 123 ? A ILE 123 124 1 Y 1 A ALA 124 ? A ALA 124 125 1 Y 1 A LEU 125 ? A LEU 125 126 1 Y 1 A MET 126 ? A MET 126 127 1 Y 1 A GLY 127 ? A GLY 127 128 1 Y 1 A THR 128 ? A THR 128 129 1 Y 1 A VAL 129 ? A VAL 129 130 1 Y 1 A ALA 130 ? A ALA 130 131 1 Y 1 A GLN 131 ? A GLN 131 132 1 Y 1 A MET 132 ? A MET 132 133 1 Y 1 A GLU 133 ? A GLU 133 134 1 Y 1 A LEU 134 ? A LEU 134 135 1 Y 1 A GLU 135 ? A GLU 135 136 1 Y 1 A ALA 136 ? A ALA 136 137 1 Y 1 A ILE 137 ? A ILE 137 138 1 Y 1 A LYS 138 ? A LYS 138 139 1 Y 1 A GLU 139 ? A GLU 139 140 1 Y 1 A ARG 140 ? A ARG 140 141 1 Y 1 A ASP 169 ? A ASP 169 142 1 Y 1 A GLY 170 ? A GLY 170 143 1 Y 1 A ILE 391 ? A ILE 391 144 1 Y 1 A GLY 392 ? A GLY 392 145 1 Y 1 A SER 393 ? A SER 393 146 1 Y 1 A PRO 394 ? A PRO 394 147 1 Y 1 A ALA 395 ? A ALA 395 148 1 Y 1 A TYR 396 ? A TYR 396 149 1 Y 1 A ARG 397 ? A ARG 397 150 1 Y 1 A ALA 398 ? A ALA 398 151 1 Y 1 A GLY 399 ? A GLY 399 152 1 Y 1 A SER 400 ? A SER 400 153 1 Y 1 A PRO 401 ? A PRO 401 154 1 Y 1 A GLN 402 ? A GLN 402 155 1 Y 1 A ARG 403 ? A ARG 403 156 1 Y 1 A GLU 404 ? A GLU 404 157 1 Y 1 A ALA 405 ? A ALA 405 158 1 Y 1 A LEU 406 ? A LEU 406 159 1 Y 1 A ASP 407 ? A ASP 407 160 1 Y 1 A ALA 408 ? A ALA 408 161 1 Y 1 A ARG 409 ? A ARG 409 162 1 Y 1 A ILE 410 ? A ILE 410 163 1 Y 1 A ALA 411 ? A ALA 411 164 1 Y 1 A ALA 412 ? A ALA 412 165 1 Y 1 A LEU 413 ? A LEU 413 166 1 Y 1 A ALA 414 ? A ALA 414 167 1 Y 1 A ALA 415 ? A ALA 415 168 1 Y 1 A ARG 487 ? A ARG 487 169 1 Y 1 A LEU 488 ? A LEU 488 170 1 Y 1 A GLY 489 ? A GLY 489 171 1 Y 1 A SER 490 ? A SER 490 172 1 Y 1 A VAL 491 ? A VAL 491 173 1 Y 1 A VAL 492 ? A VAL 492 174 1 Y 1 A GLU 493 ? A GLU 493 175 1 Y 1 A ARG 494 ? A ARG 494 176 1 Y 1 A LEU 495 ? A LEU 495 177 1 Y 1 A HIS 496 ? A HIS 496 178 1 Y 1 A THR 497 ? A THR 497 179 1 Y 1 A GLY 498 ? A GLY 498 180 1 Y 1 A MET 499 ? A MET 499 181 1 Y 1 A SER 500 ? A SER 500 182 1 Y 1 E DG 26 ? B DG 26 183 1 Y 1 E DT 27 ? B DT 27 184 1 Y 1 E DC 28 ? B DC 28 185 1 Y 1 E DT 29 ? B DT 29 186 1 Y 1 E DC 30 ? B DC 30 187 1 Y 1 E DA 31 ? B DA 31 188 1 Y 1 E DG 32 ? B DG 32 189 1 Y 1 E DT 33 ? B DT 33 190 1 Y 1 E DG 34 ? B DG 34 191 1 Y 1 E DG 35 ? B DG 35 192 1 Y 1 E DT 36 ? B DT 36 193 1 Y 1 E DG 37 ? B DG 37 194 1 Y 1 E DT 38 ? B DT 38 195 1 Y 1 E DA 39 ? B DA 39 196 1 Y 1 E DC 40 ? B DC 40 197 1 Y 1 E DG 41 ? B DG 41 198 1 Y 1 E DG 42 ? B DG 42 199 1 Y 1 E DT 43 ? B DT 43 200 1 Y 1 E DA 44 ? B DA 44 201 1 Y 1 E DC 45 ? B DC 45 202 1 Y 1 E DA 46 ? B DA 46 203 1 Y 1 E DA 47 ? B DA 47 204 1 Y 1 E DA 48 ? B DA 48 205 1 Y 1 E DC 49 ? B DC 49 206 1 Y 1 E DC 50 ? B DC 50 207 1 Y 1 E DC 51 ? B DC 51 208 1 Y 1 E DA 52 ? B DA 52 209 1 Y 1 F DT 1 ? C DT 1 210 1 Y 1 F DG 2 ? C DG 2 211 1 Y 1 F DG 3 ? C DG 3 212 1 Y 1 F DG 4 ? C DG 4 213 1 Y 1 F DT 5 ? C DT 5 214 1 Y 1 F DT 6 ? C DT 6 215 1 Y 1 F DT 7 ? C DT 7 216 1 Y 1 F DG 8 ? C DG 8 217 1 Y 1 F DT 9 ? C DT 9 218 1 Y 1 F DA 10 ? C DA 10 219 1 Y 1 F DC 11 ? C DC 11 220 1 Y 1 F DC 12 ? C DC 12 221 1 Y 1 F DG 13 ? C DG 13 222 1 Y 1 F DT 14 ? C DT 14 223 1 Y 1 F DA 15 ? C DA 15 224 1 Y 1 F DC 16 ? C DC 16 225 1 Y 1 F DA 17 ? C DA 17 226 1 Y 1 F DC 18 ? C DC 18 227 1 Y 1 F DC 19 ? C DC 19 228 1 Y 1 F DA 20 ? C DA 20 229 1 Y 1 F DC 21 ? C DC 21 230 1 Y 1 F DT 22 ? C DT 22 231 1 Y 1 F DG 23 ? C DG 23 232 1 Y 1 F DA 24 ? C DA 24 233 1 Y 1 F DG 25 ? C DG 25 234 1 Y 1 F DA 26 ? C DA 26 235 1 Y 1 F DC 27 ? C DC 27 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 ZN ZN ZN N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # _em_admin.current_status REL _em_admin.deposition_date 2024-07-20 _em_admin.deposition_site PDBJ _em_admin.entry_id 9IU8 _em_admin.last_update 2026-03-04 _em_admin.map_release_date 2026-03-04 _em_admin.title ;Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (GT/TT CDN) in the pre-strand exchange state (attP-L) ; # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2902907 _em_entity_assembly_naturalsource.organism 'Mycobacterium phage Bxb1' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 2 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_entity_assembly_synthetic.cell ? _em_entity_assembly_synthetic.cellular_location ? _em_entity_assembly_synthetic.entity_assembly_id 3 _em_entity_assembly_synthetic.id 1 _em_entity_assembly_synthetic.ncbi_tax_id 32630 _em_entity_assembly_synthetic.organ ? _em_entity_assembly_synthetic.organelle ? _em_entity_assembly_synthetic.organism 'synthetic construct' _em_entity_assembly_synthetic.strain ? _em_entity_assembly_synthetic.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 51 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? cryoSPARC ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC ? CLASSIFICATION ? 11 1 ? ? cryoSPARC ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? 'MODEL REFINEMENT' ? 13 ? 1 ? Servalcat ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9IU8 'double helix' 9IU8 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 52 1_555 -0.538 -0.180 0.108 -2.285 -1.574 0.068 1 E_DG1:DC52_F E 1 ? F 52 ? 19 1 1 B DT 2 1_555 C DA 51 1_555 -0.037 -0.099 0.091 -1.845 -5.255 -1.710 2 E_DT2:DA51_F E 2 ? F 51 ? 20 1 1 B DG 3 1_555 C DC 50 1_555 -0.599 -0.212 0.257 6.865 -6.117 -0.335 3 E_DG3:DC50_F E 3 ? F 50 ? 19 1 1 B DG 4 1_555 C DC 49 1_555 -0.480 -0.084 0.269 1.829 -7.313 1.586 4 E_DG4:DC49_F E 4 ? F 49 ? 19 1 1 B DT 5 1_555 C DA 48 1_555 0.029 -0.095 0.127 -8.201 -7.857 -0.636 5 E_DT5:DA48_F E 5 ? F 48 ? 20 1 1 B DT 6 1_555 C DA 47 1_555 -0.146 -0.018 0.311 -10.666 -3.614 -3.586 6 E_DT6:DA47_F E 6 ? F 47 ? 20 1 1 B DT 7 1_555 C DA 46 1_555 0.233 -0.094 0.174 -6.031 -2.425 -6.311 7 E_DT7:DA46_F E 7 ? F 46 ? 20 1 1 B DG 8 1_555 C DC 45 1_555 -0.484 -0.113 0.078 -1.501 -1.345 0.034 8 E_DG8:DC45_F E 8 ? F 45 ? 19 1 1 B DT 9 1_555 C DA 44 1_555 -0.096 -0.092 0.335 -5.706 -4.451 -4.331 9 E_DT9:DA44_F E 9 ? F 44 ? 20 1 1 B DC 10 1_555 C DG 43 1_555 -0.260 -0.073 0.694 -3.631 -6.167 -2.531 10 E_DC10:DG43_F E 10 ? F 43 ? 19 1 1 B DT 11 1_555 C DA 42 1_555 0.110 -0.145 0.551 -0.604 -16.007 -7.533 11 E_DT11:DA42_F E 11 ? F 42 ? 20 1 1 B DG 12 1_555 C DC 41 1_555 -0.313 -0.228 0.208 -1.803 -1.945 -1.614 12 E_DG12:DC41_F E 12 ? F 41 ? 19 1 1 B DG 13 1_555 C DC 40 1_555 -0.498 -0.197 0.494 -0.932 -4.701 -0.375 13 E_DG13:DC40_F E 13 ? F 40 ? 19 1 1 B DT 14 1_555 C DA 39 1_555 0.164 -0.150 0.689 -4.813 -6.907 -1.570 14 E_DT14:DA39_F E 14 ? F 39 ? 20 1 1 B DC 15 1_555 C DG 38 1_555 0.069 -0.132 0.055 -0.456 2.687 -1.614 15 E_DC15:DG38_F E 15 ? F 38 ? 19 1 1 B DA 16 1_555 C DT 37 1_555 0.479 -0.101 0.275 11.061 -15.212 -7.146 16 E_DA16:DT37_F E 16 ? F 37 ? 20 1 1 B DA 17 1_555 C DT 36 1_555 0.076 -0.133 0.052 0.213 -10.444 -5.110 17 E_DA17:DT36_F E 17 ? F 36 ? 20 1 1 B DC 18 1_555 C DG 35 1_555 0.546 -0.227 0.238 3.840 -5.589 0.600 18 E_DC18:DG35_F E 18 ? F 35 ? 19 1 1 B DC 19 1_555 C DG 34 1_555 0.465 -0.290 0.200 -4.815 -9.023 -2.374 19 E_DC19:DG34_F E 19 ? F 34 ? 19 1 1 B DA 20 1_555 C DT 33 1_555 0.226 -0.122 -0.045 7.962 -9.811 -7.704 20 E_DA20:DT33_F E 20 ? F 33 ? 20 1 1 B DC 21 1_555 C DG 32 1_555 0.253 -0.282 0.030 -4.580 -13.614 -3.045 21 E_DC21:DG32_F E 21 ? F 32 ? 19 1 1 B DC 22 1_555 C DG 31 1_555 0.090 -0.105 -0.358 11.338 -3.469 5.492 22 E_DC22:DG31_F E 22 ? F 31 ? 19 1 1 B DG 23 1_555 C DC 30 1_555 0.091 -0.272 0.514 19.800 -6.977 1.066 23 E_DG23:DC30_F E 23 ? F 30 ? 19 1 1 B DC 24 1_555 C DG 29 1_555 -0.291 -0.169 0.050 2.491 -13.770 1.800 24 E_DC24:DG29_F E 24 ? F 29 ? 19 1 1 B DG 25 1_555 C DC 28 1_555 0.106 -0.048 0.309 7.771 -5.033 -3.909 25 E_DG25:DC28_F E 25 ? F 28 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 52 1_555 B DT 2 1_555 C DA 51 1_555 -0.057 -0.418 3.562 0.905 -0.895 35.801 -0.539 0.235 3.568 -1.456 -1.472 35.823 1 EE_DG1DT2:DA51DC52_FF E 1 ? F 52 ? E 2 ? F 51 ? 1 B DT 2 1_555 C DA 51 1_555 B DG 3 1_555 C DC 50 1_555 -0.194 -0.247 3.199 -1.285 7.341 31.225 -1.728 0.126 3.068 13.401 2.345 32.080 2 EE_DT2DG3:DC50DA51_FF E 2 ? F 51 ? E 3 ? F 50 ? 1 B DG 3 1_555 C DC 50 1_555 B DG 4 1_555 C DC 49 1_555 0.533 -0.848 3.459 -1.848 3.326 33.865 -1.998 -1.216 3.330 5.688 3.161 34.071 3 EE_DG3DG4:DC49DC50_FF E 3 ? F 50 ? E 4 ? F 49 ? 1 B DG 4 1_555 C DC 49 1_555 B DT 5 1_555 C DA 48 1_555 -0.444 -1.243 3.660 0.835 -2.423 36.731 -1.596 0.831 3.720 -3.839 -1.324 36.817 4 EE_DG4DT5:DA48DC49_FF E 4 ? F 49 ? E 5 ? F 48 ? 1 B DT 5 1_555 C DA 48 1_555 B DT 6 1_555 C DA 47 1_555 -0.169 -1.084 3.491 -0.944 -3.944 34.840 -1.156 0.127 3.592 -6.560 1.569 35.068 5 EE_DT5DT6:DA47DA48_FF E 5 ? F 48 ? E 6 ? F 47 ? 1 B DT 6 1_555 C DA 47 1_555 B DT 7 1_555 C DA 46 1_555 -0.739 -1.010 3.195 1.742 -0.280 31.526 -1.806 1.672 3.159 -0.515 -3.204 31.574 6 EE_DT6DT7:DA46DA47_FF E 6 ? F 47 ? E 7 ? F 46 ? 1 B DT 7 1_555 C DA 46 1_555 B DG 8 1_555 C DC 45 1_555 1.039 -1.033 3.174 1.754 1.710 29.174 -2.403 -1.687 3.165 3.387 -3.474 29.275 7 EE_DT7DG8:DC45DA46_FF E 7 ? F 46 ? E 8 ? F 45 ? 1 B DG 8 1_555 C DC 45 1_555 B DT 9 1_555 C DA 44 1_555 -0.388 -1.347 3.493 -0.343 -4.577 35.611 -1.468 0.576 3.636 -7.446 0.557 35.897 8 EE_DG8DT9:DA44DC45_FF E 8 ? F 45 ? E 9 ? F 44 ? 1 B DT 9 1_555 C DA 44 1_555 B DC 10 1_555 C DG 43 1_555 -0.216 -0.183 3.412 -0.969 -9.216 39.642 0.812 0.197 3.374 -13.369 1.406 40.668 9 EE_DT9DC10:DG43DA44_FF E 9 ? F 44 ? E 10 ? F 43 ? 1 B DC 10 1_555 C DG 43 1_555 B DT 11 1_555 C DA 42 1_555 -0.733 -0.114 3.236 1.304 0.688 31.264 -0.339 1.600 3.200 1.275 -2.419 31.298 10 EE_DC10DT11:DA42DG43_FF E 10 ? F 43 ? E 11 ? F 42 ? 1 B DT 11 1_555 C DA 42 1_555 B DG 12 1_555 C DC 41 1_555 1.185 0.715 3.400 5.411 -3.268 38.324 1.496 -1.086 3.459 -4.936 -8.174 38.822 11 EE_DT11DG12:DC41DA42_FF E 11 ? F 42 ? E 12 ? F 41 ? 1 B DG 12 1_555 C DC 41 1_555 B DG 13 1_555 C DC 40 1_555 -0.650 -0.190 3.310 -5.714 3.926 34.295 -0.924 0.197 3.331 6.575 9.569 34.968 12 EE_DG12DG13:DC40DC41_FF E 12 ? F 41 ? E 13 ? F 40 ? 1 B DG 13 1_555 C DC 40 1_555 B DT 14 1_555 C DA 39 1_555 -0.174 -0.738 3.539 -1.513 -0.876 35.223 -1.077 0.044 3.560 -1.447 2.499 35.265 13 EE_DG13DT14:DA39DC40_FF E 13 ? F 40 ? E 14 ? F 39 ? 1 B DT 14 1_555 C DA 39 1_555 B DC 15 1_555 C DG 38 1_555 0.882 0.280 3.316 6.371 3.836 33.909 -0.144 -0.459 3.431 6.481 -10.763 34.691 14 EE_DT14DC15:DG38DA39_FF E 14 ? F 39 ? E 15 ? F 38 ? 1 B DC 15 1_555 C DG 38 1_555 B DA 16 1_555 C DT 37 1_555 -0.898 1.213 3.296 -2.049 1.166 35.008 1.835 1.176 3.379 1.935 3.402 35.085 15 EE_DC15DA16:DT37DG38_FF E 15 ? F 38 ? E 16 ? F 37 ? 1 B DA 16 1_555 C DT 37 1_555 B DA 17 1_555 C DT 36 1_555 0.059 0.439 3.663 -0.037 -1.925 35.270 1.041 -0.104 3.634 -3.175 0.062 35.321 16 EE_DA16DA17:DT36DT37_FF E 16 ? F 37 ? E 17 ? F 36 ? 1 B DA 17 1_555 C DT 36 1_555 B DC 18 1_555 C DG 35 1_555 0.783 -0.762 3.207 -2.105 1.049 31.888 -1.568 -1.791 3.124 1.906 3.825 31.973 17 EE_DA17DC18:DG35DT36_FF E 17 ? F 36 ? E 18 ? F 35 ? 1 B DC 18 1_555 C DG 35 1_555 B DC 19 1_555 C DG 34 1_555 0.067 -1.159 3.581 -0.865 -4.873 40.232 -1.067 -0.204 3.688 -7.052 1.252 40.523 18 EE_DC18DC19:DG34DG35_FF E 18 ? F 35 ? E 19 ? F 34 ? 1 B DC 19 1_555 C DG 34 1_555 B DA 20 1_555 C DT 33 1_555 -0.149 -0.195 2.983 3.599 3.945 31.192 -1.018 0.876 2.903 7.270 -6.633 31.635 19 EE_DC19DA20:DT33DG34_FF E 19 ? F 34 ? E 20 ? F 33 ? 1 B DA 20 1_555 C DT 33 1_555 B DC 21 1_555 C DG 32 1_555 1.055 -0.833 3.564 1.747 3.794 27.746 -2.686 -1.730 3.480 7.856 -3.617 28.052 20 EE_DA20DC21:DG32DT33_FF E 20 ? F 33 ? E 21 ? F 32 ? 1 B DC 21 1_555 C DG 32 1_555 B DC 22 1_555 C DG 31 1_555 0.494 2.078 3.123 7.379 -1.109 35.242 3.514 0.210 3.095 -1.807 -12.021 35.999 21 EE_DC21DC22:DG31DG32_FF E 21 ? F 32 ? E 22 ? F 31 ? 1 B DC 22 1_555 C DG 31 1_555 B DG 23 1_555 C DC 30 1_555 -1.568 1.681 3.198 -12.300 16.839 23.124 -0.920 -0.037 3.908 34.364 25.101 31.042 22 EE_DC22DG23:DC30DG31_FF E 22 ? F 31 ? E 23 ? F 30 ? 1 B DG 23 1_555 C DC 30 1_555 B DC 24 1_555 C DG 29 1_555 0.004 -0.149 3.681 3.548 -6.627 37.796 0.703 0.490 3.641 -10.108 -5.412 38.510 23 EE_DG23DC24:DG29DC30_FF E 23 ? F 30 ? E 24 ? F 29 ? 1 B DC 24 1_555 C DG 29 1_555 B DG 25 1_555 C DC 28 1_555 0.647 0.914 3.359 1.662 9.894 35.859 0.024 -0.777 3.506 15.695 -2.637 37.191 24 EE_DC24DG25:DC28DG29_FF E 24 ? F 29 ? E 25 ? F 28 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Science and Technology' Japan JPMJAX232F 1 'Japan Science and Technology' Japan JPMJCR23B6 2 # _atom_sites.entry_id 9IU8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S ZN # loop_ #