HEADER VIRAL PROTEIN/IMMUNE SYSTEM 31-JUL-24 9IYY TITLE STRUCTURE OF HBSAG IN COMPLEX WITH FAB H006 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LARGE ENVELOPE PROTEIN; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: L GLYCOPROTEIN,L-HBSAG,LHB,LARGE S PROTEIN,LARGE SURFACE COMPND 5 PROTEIN,MAJOR SURFACE ANTIGEN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HEAVY CHAIN OF ANTIBODY H006 FAB; COMPND 9 CHAIN: H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: LIGHT CHAIN OF ANTIBODY H006 FAB; COMPND 13 CHAIN: L; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HBV GENOTYPE D3; SOURCE 3 ORGANISM_TAXID: 1219353; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HBV, HBSAG, VIRAL PROTEIN, ANTIBODY, FAB, VIRAL PROTEIN-IMMUNE SYSTEM KEYWDS 2 COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR L.CHEN,X.HE REVDAT 1 02-JUL-25 9IYY 0 JRNL AUTH X.HE,W.TAO,Y.KANG,J.XU,X.LIU,L.CHEN JRNL TITL STRUCTURAL POLYMORPHISM OF THE ANTIGENIC LOOP IN HBV SURFACE JRNL TITL 2 ANTIGEN DICTATES BINDING OF DIVERSE NEUTRALIZING ANTIBODIES. JRNL REF CELL DISCOV V. 11 57 2025 JRNL REFN ESSN 2056-5968 JRNL PMID 40523894 JRNL DOI 10.1038/S41421-025-00803-2 REMARK 2 REMARK 2 RESOLUTION. 3.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.130 REMARK 3 NUMBER OF PARTICLES : 820246 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9IYY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300049992. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HBV SURFACE ANTIGEN DIMER REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.41 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ASN B 3 REMARK 465 ILE B 4 REMARK 465 THR B 5 REMARK 465 SER B 6 REMARK 465 GLY B 7 REMARK 465 PHE B 8 REMARK 465 LEU B 9 REMARK 465 GLY B 10 REMARK 465 PRO B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 VAL B 14 REMARK 465 LEU B 15 REMARK 465 GLN B 16 REMARK 465 ALA B 17 REMARK 465 GLY B 18 REMARK 465 PHE B 19 REMARK 465 PHE B 20 REMARK 465 LEU B 21 REMARK 465 LEU B 22 REMARK 465 THR B 23 REMARK 465 ARG B 24 REMARK 465 ILE B 25 REMARK 465 LEU B 26 REMARK 465 THR B 27 REMARK 465 ILE B 28 REMARK 465 PRO B 29 REMARK 465 GLN B 30 REMARK 465 SER B 31 REMARK 465 LEU B 32 REMARK 465 ASP B 33 REMARK 465 SER B 34 REMARK 465 TRP B 35 REMARK 465 TRP B 36 REMARK 465 THR B 37 REMARK 465 SER B 38 REMARK 465 LEU B 39 REMARK 465 ASN B 40 REMARK 465 PHE B 41 REMARK 465 LEU B 42 REMARK 465 GLY B 43 REMARK 465 GLY B 44 REMARK 465 THR B 45 REMARK 465 THR B 46 REMARK 465 VAL B 47 REMARK 465 CYS B 48 REMARK 465 LEU B 49 REMARK 465 GLY B 50 REMARK 465 GLN B 51 REMARK 465 ASN B 52 REMARK 465 SER B 53 REMARK 465 GLN B 54 REMARK 465 SER B 55 REMARK 465 PRO B 56 REMARK 465 THR B 57 REMARK 465 SER B 58 REMARK 465 ASN B 59 REMARK 465 HIS B 60 REMARK 465 SER B 61 REMARK 465 PRO B 62 REMARK 465 THR B 63 REMARK 465 SER B 64 REMARK 465 CYS B 65 REMARK 465 PRO B 66 REMARK 465 PRO B 67 REMARK 465 THR B 68 REMARK 465 CYS B 69 REMARK 465 PRO B 70 REMARK 465 GLY B 71 REMARK 465 TYR B 72 REMARK 465 ARG B 73 REMARK 465 TRP B 74 REMARK 465 MET B 75 REMARK 465 CYS B 76 REMARK 465 LEU B 77 REMARK 465 ARG B 78 REMARK 465 ARG B 79 REMARK 465 PHE B 80 REMARK 465 ILE B 81 REMARK 465 ILE B 82 REMARK 465 PHE B 83 REMARK 465 LEU B 84 REMARK 465 PHE B 85 REMARK 465 ILE B 86 REMARK 465 LEU B 87 REMARK 465 LEU B 88 REMARK 465 LEU B 89 REMARK 465 CYS B 90 REMARK 465 LEU B 91 REMARK 465 ILE B 92 REMARK 465 PHE B 93 REMARK 465 LEU B 94 REMARK 465 THR B 127 REMARK 465 ALA B 128 REMARK 465 GLN B 129 REMARK 465 GLY B 130 REMARK 465 THR B 131 REMARK 465 SER B 132 REMARK 465 MET B 133 REMARK 465 TYR B 134 REMARK 465 GLU B 164 REMARK 465 TRP B 165 REMARK 465 ALA B 166 REMARK 465 SER B 167 REMARK 465 ALA B 168 REMARK 465 ARG B 169 REMARK 465 PHE B 170 REMARK 465 SER B 171 REMARK 465 TRP B 172 REMARK 465 LEU B 173 REMARK 465 SER B 174 REMARK 465 LEU B 175 REMARK 465 LEU B 176 REMARK 465 VAL B 177 REMARK 465 PRO B 178 REMARK 465 PHE B 179 REMARK 465 VAL B 180 REMARK 465 GLN B 181 REMARK 465 TRP B 182 REMARK 465 PHE B 183 REMARK 465 VAL B 184 REMARK 465 GLY B 185 REMARK 465 LEU B 186 REMARK 465 SER B 187 REMARK 465 PRO B 188 REMARK 465 THR B 189 REMARK 465 VAL B 190 REMARK 465 TRP B 191 REMARK 465 LEU B 192 REMARK 465 SER B 193 REMARK 465 VAL B 194 REMARK 465 ILE B 195 REMARK 465 TRP B 196 REMARK 465 MET B 197 REMARK 465 MET B 198 REMARK 465 TRP B 199 REMARK 465 TYR B 200 REMARK 465 TRP B 201 REMARK 465 GLY B 202 REMARK 465 PRO B 203 REMARK 465 SER B 204 REMARK 465 LEU B 205 REMARK 465 TYR B 206 REMARK 465 SER B 207 REMARK 465 ILE B 208 REMARK 465 LEU B 209 REMARK 465 SER B 210 REMARK 465 PRO B 211 REMARK 465 PHE B 212 REMARK 465 LEU B 213 REMARK 465 PRO B 214 REMARK 465 LEU B 215 REMARK 465 LEU B 216 REMARK 465 PRO B 217 REMARK 465 ILE B 218 REMARK 465 PHE B 219 REMARK 465 PHE B 220 REMARK 465 CYS B 221 REMARK 465 LEU B 222 REMARK 465 TRP B 223 REMARK 465 VAL B 224 REMARK 465 TYR B 225 REMARK 465 ILE B 226 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 ILE A 4 REMARK 465 THR A 5 REMARK 465 SER A 6 REMARK 465 GLY A 7 REMARK 465 PHE A 8 REMARK 465 LEU A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 VAL A 14 REMARK 465 LEU A 15 REMARK 465 GLN A 16 REMARK 465 ALA A 17 REMARK 465 GLY A 18 REMARK 465 PHE A 19 REMARK 465 PHE A 20 REMARK 465 LEU A 21 REMARK 465 LEU A 22 REMARK 465 THR A 23 REMARK 465 ARG A 24 REMARK 465 ILE A 25 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 465 ILE A 28 REMARK 465 PRO A 29 REMARK 465 GLN A 30 REMARK 465 SER A 31 REMARK 465 LEU A 32 REMARK 465 ASP A 33 REMARK 465 SER A 34 REMARK 465 TRP A 35 REMARK 465 TRP A 36 REMARK 465 THR A 37 REMARK 465 SER A 38 REMARK 465 LEU A 39 REMARK 465 ASN A 40 REMARK 465 PHE A 41 REMARK 465 LEU A 42 REMARK 465 GLY A 43 REMARK 465 GLY A 44 REMARK 465 THR A 45 REMARK 465 THR A 46 REMARK 465 VAL A 47 REMARK 465 CYS A 48 REMARK 465 LEU A 49 REMARK 465 GLY A 50 REMARK 465 GLN A 51 REMARK 465 ASN A 52 REMARK 465 SER A 53 REMARK 465 GLN A 54 REMARK 465 SER A 55 REMARK 465 PRO A 56 REMARK 465 THR A 57 REMARK 465 SER A 58 REMARK 465 ASN A 59 REMARK 465 HIS A 60 REMARK 465 SER A 61 REMARK 465 PRO A 62 REMARK 465 THR A 63 REMARK 465 SER A 64 REMARK 465 CYS A 65 REMARK 465 PRO A 66 REMARK 465 PRO A 67 REMARK 465 THR A 68 REMARK 465 CYS A 69 REMARK 465 PRO A 70 REMARK 465 GLY A 71 REMARK 465 TYR A 72 REMARK 465 ARG A 73 REMARK 465 TRP A 74 REMARK 465 MET A 75 REMARK 465 CYS A 76 REMARK 465 LEU A 77 REMARK 465 ARG A 78 REMARK 465 ARG A 79 REMARK 465 PHE A 80 REMARK 465 ILE A 81 REMARK 465 ILE A 82 REMARK 465 PHE A 83 REMARK 465 LEU A 84 REMARK 465 PHE A 85 REMARK 465 ILE A 86 REMARK 465 LEU A 87 REMARK 465 LEU A 88 REMARK 465 LEU A 89 REMARK 465 CYS A 90 REMARK 465 LEU A 91 REMARK 465 ILE A 92 REMARK 465 PHE A 93 REMARK 465 LEU A 94 REMARK 465 ILE A 110 REMARK 465 PRO A 111 REMARK 465 GLY A 112 REMARK 465 SER A 113 REMARK 465 SER A 114 REMARK 465 THR A 115 REMARK 465 THR A 116 REMARK 465 SER A 117 REMARK 465 THR A 118 REMARK 465 THR A 123 REMARK 465 CYS A 124 REMARK 465 MET A 125 REMARK 465 THR A 126 REMARK 465 THR A 127 REMARK 465 ALA A 128 REMARK 465 GLN A 129 REMARK 465 GLY A 130 REMARK 465 THR A 131 REMARK 465 LYS A 141 REMARK 465 PRO A 142 REMARK 465 SER A 143 REMARK 465 ASP A 144 REMARK 465 ALA A 168 REMARK 465 ARG A 169 REMARK 465 PHE A 170 REMARK 465 SER A 171 REMARK 465 TRP A 172 REMARK 465 LEU A 173 REMARK 465 SER A 174 REMARK 465 LEU A 175 REMARK 465 LEU A 176 REMARK 465 VAL A 177 REMARK 465 PRO A 178 REMARK 465 PHE A 179 REMARK 465 VAL A 180 REMARK 465 GLN A 181 REMARK 465 TRP A 182 REMARK 465 PHE A 183 REMARK 465 VAL A 184 REMARK 465 GLY A 185 REMARK 465 LEU A 186 REMARK 465 SER A 187 REMARK 465 PRO A 188 REMARK 465 THR A 189 REMARK 465 VAL A 190 REMARK 465 TRP A 191 REMARK 465 LEU A 192 REMARK 465 SER A 193 REMARK 465 VAL A 194 REMARK 465 ILE A 195 REMARK 465 TRP A 196 REMARK 465 MET A 197 REMARK 465 MET A 198 REMARK 465 TRP A 199 REMARK 465 TYR A 200 REMARK 465 TRP A 201 REMARK 465 GLY A 202 REMARK 465 PRO A 203 REMARK 465 SER A 204 REMARK 465 LEU A 205 REMARK 465 TYR A 206 REMARK 465 SER A 207 REMARK 465 ILE A 208 REMARK 465 LEU A 209 REMARK 465 SER A 210 REMARK 465 PRO A 211 REMARK 465 PHE A 212 REMARK 465 LEU A 213 REMARK 465 PRO A 214 REMARK 465 LEU A 215 REMARK 465 LEU A 216 REMARK 465 PRO A 217 REMARK 465 ILE A 218 REMARK 465 PHE A 219 REMARK 465 PHE A 220 REMARK 465 CYS A 221 REMARK 465 LEU A 222 REMARK 465 TRP A 223 REMARK 465 VAL A 224 REMARK 465 TYR A 225 REMARK 465 ILE A 226 REMARK 465 SER H 124 REMARK 465 ALA H 125 REMARK 465 SER H 126 REMARK 465 THR H 127 REMARK 465 LYS H 128 REMARK 465 GLY H 129 REMARK 465 PRO H 130 REMARK 465 SER H 131 REMARK 465 VAL H 132 REMARK 465 PHE H 133 REMARK 465 PRO H 134 REMARK 465 LEU H 135 REMARK 465 ALA H 136 REMARK 465 PRO H 137 REMARK 465 SER H 138 REMARK 465 SER H 139 REMARK 465 LYS H 140 REMARK 465 SER H 141 REMARK 465 THR H 142 REMARK 465 SER H 143 REMARK 465 GLY H 144 REMARK 465 GLY H 145 REMARK 465 THR H 146 REMARK 465 ALA H 147 REMARK 465 ALA H 148 REMARK 465 LEU H 149 REMARK 465 GLY H 150 REMARK 465 CYS H 151 REMARK 465 LEU H 152 REMARK 465 VAL H 153 REMARK 465 LYS H 154 REMARK 465 ASP H 155 REMARK 465 TYR H 156 REMARK 465 PHE H 157 REMARK 465 CYS H 158 REMARK 465 GLU H 159 REMARK 465 CYS H 160 REMARK 465 PRO H 161 REMARK 465 VAL H 162 REMARK 465 THR H 163 REMARK 465 VAL H 164 REMARK 465 SER H 165 REMARK 465 TRP H 166 REMARK 465 ASN H 167 REMARK 465 SER H 168 REMARK 465 GLY H 169 REMARK 465 ALA H 170 REMARK 465 LEU H 171 REMARK 465 THR H 172 REMARK 465 SER H 173 REMARK 465 GLY H 174 REMARK 465 VAL H 175 REMARK 465 HIS H 176 REMARK 465 THR H 177 REMARK 465 PHE H 178 REMARK 465 PRO H 179 REMARK 465 ALA H 180 REMARK 465 VAL H 181 REMARK 465 LEU H 182 REMARK 465 GLN H 183 REMARK 465 SER H 184 REMARK 465 SER H 185 REMARK 465 GLY H 186 REMARK 465 LEU H 187 REMARK 465 TYR H 188 REMARK 465 SER H 189 REMARK 465 LEU H 190 REMARK 465 SER H 191 REMARK 465 SER H 192 REMARK 465 VAL H 193 REMARK 465 VAL H 194 REMARK 465 THR H 195 REMARK 465 VAL H 196 REMARK 465 PRO H 197 REMARK 465 SER H 198 REMARK 465 SER H 199 REMARK 465 SER H 200 REMARK 465 LEU H 201 REMARK 465 GLY H 202 REMARK 465 THR H 203 REMARK 465 GLN H 204 REMARK 465 THR H 205 REMARK 465 TYR H 206 REMARK 465 ILE H 207 REMARK 465 CYS H 208 REMARK 465 ASN H 209 REMARK 465 VAL H 210 REMARK 465 ASN H 211 REMARK 465 HIS H 212 REMARK 465 LYS H 213 REMARK 465 PRO H 214 REMARK 465 SER H 215 REMARK 465 ASN H 216 REMARK 465 THR H 217 REMARK 465 LYS H 218 REMARK 465 VAL H 219 REMARK 465 ASP H 220 REMARK 465 LYS H 221 REMARK 465 ARG H 222 REMARK 465 VAL H 223 REMARK 465 SER L 1 REMARK 465 ARG L 109 REMARK 465 THR L 110 REMARK 465 VAL L 111 REMARK 465 ALA L 112 REMARK 465 ALA L 113 REMARK 465 PRO L 114 REMARK 465 SER L 115 REMARK 465 VAL L 116 REMARK 465 PHE L 117 REMARK 465 ILE L 118 REMARK 465 PHE L 119 REMARK 465 PRO L 120 REMARK 465 PRO L 121 REMARK 465 SER L 122 REMARK 465 ASP L 123 REMARK 465 GLU L 124 REMARK 465 GLN L 125 REMARK 465 LEU L 126 REMARK 465 LYS L 127 REMARK 465 SER L 128 REMARK 465 GLY L 129 REMARK 465 THR L 130 REMARK 465 ALA L 131 REMARK 465 SER L 132 REMARK 465 VAL L 133 REMARK 465 VAL L 134 REMARK 465 CYS L 135 REMARK 465 LEU L 136 REMARK 465 LEU L 137 REMARK 465 ASN L 138 REMARK 465 ASN L 139 REMARK 465 PHE L 140 REMARK 465 TYR L 141 REMARK 465 PRO L 142 REMARK 465 ARG L 143 REMARK 465 GLU L 144 REMARK 465 ALA L 145 REMARK 465 LYS L 146 REMARK 465 VAL L 147 REMARK 465 GLN L 148 REMARK 465 TRP L 149 REMARK 465 LYS L 150 REMARK 465 VAL L 151 REMARK 465 ASP L 152 REMARK 465 ASN L 153 REMARK 465 ALA L 154 REMARK 465 LEU L 155 REMARK 465 GLN L 156 REMARK 465 SER L 157 REMARK 465 GLY L 158 REMARK 465 ASN L 159 REMARK 465 SER L 160 REMARK 465 GLN L 161 REMARK 465 GLU L 162 REMARK 465 SER L 163 REMARK 465 VAL L 164 REMARK 465 THR L 165 REMARK 465 CYS L 166 REMARK 465 GLN L 167 REMARK 465 ASP L 168 REMARK 465 SER L 169 REMARK 465 LYS L 170 REMARK 465 ASP L 171 REMARK 465 CYS L 172 REMARK 465 THR L 173 REMARK 465 TYR L 174 REMARK 465 SER L 175 REMARK 465 LEU L 176 REMARK 465 SER L 177 REMARK 465 SER L 178 REMARK 465 THR L 179 REMARK 465 LEU L 180 REMARK 465 THR L 181 REMARK 465 LEU L 182 REMARK 465 SER L 183 REMARK 465 LYS L 184 REMARK 465 ALA L 185 REMARK 465 ASP L 186 REMARK 465 TYR L 187 REMARK 465 GLU L 188 REMARK 465 LYS L 189 REMARK 465 HIS L 190 REMARK 465 LYS L 191 REMARK 465 VAL L 192 REMARK 465 TYR L 193 REMARK 465 ALA L 194 REMARK 465 CYS L 195 REMARK 465 GLU L 196 REMARK 465 VAL L 197 REMARK 465 THR L 198 REMARK 465 HIS L 199 REMARK 465 GLN L 200 REMARK 465 GLY L 201 REMARK 465 LEU L 202 REMARK 465 SER L 203 REMARK 465 SER L 204 REMARK 465 PRO L 205 REMARK 465 VAL L 206 REMARK 465 THR L 207 REMARK 465 LYS L 208 REMARK 465 SER L 209 REMARK 465 PHE L 210 REMARK 465 ASN L 211 REMARK 465 ARG L 212 REMARK 465 GLY L 213 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 103 CG SD CE REMARK 470 THR B 126 OG1 CG2 REMARK 470 TRP B 163 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 163 CZ3 CH2 REMARK 470 LEU A 109 CG CD1 CD2 REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 GLN H 1 CG CD OE1 NE2 REMARK 470 VAL L 3 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO H 41 80.67 -69.52 REMARK 500 ALA H 92 -169.59 -166.55 REMARK 500 GLN L 16 -169.80 -77.04 REMARK 500 ASP L 50 -14.61 72.72 REMARK 500 ASN L 51 -16.11 -144.17 REMARK 500 PRO L 54 -176.69 -67.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-61004 RELATED DB: EMDB REMARK 900 STRUCTURE OF HBSAG IN COMPLEX WITH FAB H006 DBREF 9IYY B 1 226 UNP V9P415 V9P415_HBV 164 389 DBREF 9IYY A 1 226 UNP V9P415 V9P415_HBV 164 389 DBREF 9IYY H 1 223 PDB 9IYY 9IYY 1 223 DBREF 9IYY L 1 215 PDB 9IYY 9IYY 1 215 SEQRES 1 B 226 MET GLU ASN ILE THR SER GLY PHE LEU GLY PRO LEU LEU SEQRES 2 B 226 VAL LEU GLN ALA GLY PHE PHE LEU LEU THR ARG ILE LEU SEQRES 3 B 226 THR ILE PRO GLN SER LEU ASP SER TRP TRP THR SER LEU SEQRES 4 B 226 ASN PHE LEU GLY GLY THR THR VAL CYS LEU GLY GLN ASN SEQRES 5 B 226 SER GLN SER PRO THR SER ASN HIS SER PRO THR SER CYS SEQRES 6 B 226 PRO PRO THR CYS PRO GLY TYR ARG TRP MET CYS LEU ARG SEQRES 7 B 226 ARG PHE ILE ILE PHE LEU PHE ILE LEU LEU LEU CYS LEU SEQRES 8 B 226 ILE PHE LEU LEU VAL LEU LEU ASP TYR GLN GLY MET LEU SEQRES 9 B 226 PRO VAL CYS PRO LEU ILE PRO GLY SER SER THR THR SER SEQRES 10 B 226 THR GLY PRO CYS ARG THR CYS MET THR THR ALA GLN GLY SEQRES 11 B 226 THR SER MET TYR PRO SER CYS CYS CYS THR LYS PRO SER SEQRES 12 B 226 ASP GLY ASN CYS THR CYS ILE PRO ILE PRO SER SER TRP SEQRES 13 B 226 ALA PHE GLY LYS PHE LEU TRP GLU TRP ALA SER ALA ARG SEQRES 14 B 226 PHE SER TRP LEU SER LEU LEU VAL PRO PHE VAL GLN TRP SEQRES 15 B 226 PHE VAL GLY LEU SER PRO THR VAL TRP LEU SER VAL ILE SEQRES 16 B 226 TRP MET MET TRP TYR TRP GLY PRO SER LEU TYR SER ILE SEQRES 17 B 226 LEU SER PRO PHE LEU PRO LEU LEU PRO ILE PHE PHE CYS SEQRES 18 B 226 LEU TRP VAL TYR ILE SEQRES 1 A 226 MET GLU ASN ILE THR SER GLY PHE LEU GLY PRO LEU LEU SEQRES 2 A 226 VAL LEU GLN ALA GLY PHE PHE LEU LEU THR ARG ILE LEU SEQRES 3 A 226 THR ILE PRO GLN SER LEU ASP SER TRP TRP THR SER LEU SEQRES 4 A 226 ASN PHE LEU GLY GLY THR THR VAL CYS LEU GLY GLN ASN SEQRES 5 A 226 SER GLN SER PRO THR SER ASN HIS SER PRO THR SER CYS SEQRES 6 A 226 PRO PRO THR CYS PRO GLY TYR ARG TRP MET CYS LEU ARG SEQRES 7 A 226 ARG PHE ILE ILE PHE LEU PHE ILE LEU LEU LEU CYS LEU SEQRES 8 A 226 ILE PHE LEU LEU VAL LEU LEU ASP TYR GLN GLY MET LEU SEQRES 9 A 226 PRO VAL CYS PRO LEU ILE PRO GLY SER SER THR THR SER SEQRES 10 A 226 THR GLY PRO CYS ARG THR CYS MET THR THR ALA GLN GLY SEQRES 11 A 226 THR SER MET TYR PRO SER CYS CYS CYS THR LYS PRO SER SEQRES 12 A 226 ASP GLY ASN CYS THR CYS ILE PRO ILE PRO SER SER TRP SEQRES 13 A 226 ALA PHE GLY LYS PHE LEU TRP GLU TRP ALA SER ALA ARG SEQRES 14 A 226 PHE SER TRP LEU SER LEU LEU VAL PRO PHE VAL GLN TRP SEQRES 15 A 226 PHE VAL GLY LEU SER PRO THR VAL TRP LEU SER VAL ILE SEQRES 16 A 226 TRP MET MET TRP TYR TRP GLY PRO SER LEU TYR SER ILE SEQRES 17 A 226 LEU SER PRO PHE LEU PRO LEU LEU PRO ILE PHE PHE CYS SEQRES 18 A 226 LEU TRP VAL TYR ILE SEQRES 1 H 223 GLN MET ARG LEU VAL GLU SER GLY GLY GLY CYS VAL ARG SEQRES 2 H 223 PRO GLY GLY SER LEU ARG LEU SER CYS ALA GLY SER GLY SEQRES 3 H 223 PHE ARG PHE THR GLY TYR GLY ILE HIS TRP VAL ARG GLN SEQRES 4 H 223 ALA PRO GLY LYS GLY LEU GLU TRP LEU ALA TYR ILE SER SEQRES 5 H 223 ASN ASP GLY SER LYS LYS TYR HIS THR ASP SER VAL LYS SEQRES 6 H 223 GLY ARG PHE THR VAL SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 H 223 ALA TYR LEU GLN MET ASN SER LEU ARG VAL GLU GLU THR SEQRES 8 H 223 ALA VAL TYR PHE CYS ALA LYS ASP GLY TYR LEU SER ALA SEQRES 9 H 223 ALA ARG GLY TYR GLY MET ASP VAL TRP GLY GLN GLY ILE SEQRES 10 H 223 CYS VAL THR VAL SER PRO SER ALA SER THR LYS GLY PRO SEQRES 11 H 223 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 223 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 223 PHE CYS GLU CYS PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 223 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 223 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 223 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 223 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 223 ARG VAL SEQRES 1 L 215 SER TYR VAL LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 L 215 PRO GLY GLN THR ALA THR ILE THR CYS GLY GLY ASN ASN SEQRES 3 L 215 ILE GLY GLY LYS SER VAL HIS TRP PHE GLN GLN LYS CYS SEQRES 4 L 215 GLY GLN ALA PRO LEU LEU ILE ILE SER ASP ASP ASN ASP SEQRES 5 L 215 ARG PRO SER GLY ILE PRO GLU ARG VAL SER GLY SER ASN SEQRES 6 L 215 SER GLY ASN THR ALA THR LEU THR ILE SER ARG VAL GLU SEQRES 7 L 215 CYS GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL TRP ASP SEQRES 8 L 215 THR THR SER ASP GLN LEU VAL PHE GLY GLY GLY THR MET SEQRES 9 L 215 LEU THR VAL LEU ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR CYS GLN ASP SER SEQRES 14 L 215 LYS ASP CYS THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS HELIX 1 AA1 CYS B 121 MET B 125 5 5 HELIX 2 AA2 TRP B 156 TRP B 163 1 8 HELIX 3 AA3 VAL A 96 GLN A 101 1 6 HELIX 4 AA4 TRP A 156 ALA A 166 1 11 HELIX 5 AA5 ARG H 87 THR H 91 5 5 HELIX 6 AA6 ASN L 26 LYS L 30 5 5 HELIX 7 AA7 GLU L 78 GLU L 82 5 5 SHEET 1 AA1 4 THR B 148 PRO B 151 0 SHEET 2 AA1 4 CYS B 137 THR B 140 -1 N CYS B 138 O ILE B 150 SHEET 3 AA1 4 CYS A 137 CYS A 139 -1 O CYS A 139 N CYS B 137 SHEET 4 AA1 4 CYS A 149 PRO A 151 -1 O ILE A 150 N CYS A 138 SHEET 1 AA2 4 ARG H 3 SER H 7 0 SHEET 2 AA2 4 SER H 21 SER H 25 -1 O SER H 25 N ARG H 3 SHEET 3 AA2 4 THR H 78 MET H 83 -1 N ALA H 79 O CYS H 22 SHEET 4 AA2 4 LEU H 18 ARG H 19 -1 N LEU H 18 O MET H 83 SHEET 1 AA3 4 ARG H 3 SER H 7 0 SHEET 2 AA3 4 SER H 21 SER H 25 -1 O SER H 25 N ARG H 3 SHEET 3 AA3 4 THR H 78 MET H 83 -1 N ALA H 79 O CYS H 22 SHEET 4 AA3 4 PHE H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AA4 5 LYS H 58 HIS H 60 0 SHEET 2 AA4 5 LEU H 45 ILE H 51 -1 N TYR H 50 O TYR H 59 SHEET 3 AA4 5 TYR H 32 GLN H 39 -1 N ARG H 38 O GLU H 46 SHEET 4 AA4 5 ALA H 97 LEU H 102 -1 O ASP H 99 N GLY H 33 SHEET 5 AA4 5 MET H 110 TRP H 113 -1 O ASP H 111 N LYS H 98 SHEET 1 AA5 5 LYS H 58 HIS H 60 0 SHEET 2 AA5 5 LEU H 45 ILE H 51 -1 N TYR H 50 O TYR H 59 SHEET 3 AA5 5 TYR H 32 GLN H 39 -1 N ARG H 38 O GLU H 46 SHEET 4 AA5 5 ALA H 92 PHE H 95 -1 O PHE H 95 N VAL H 37 SHEET 5 AA5 5 ILE H 117 VAL H 119 -1 O ILE H 117 N TYR H 94 SHEET 1 AA6 5 SER L 9 SER L 11 0 SHEET 2 AA6 5 THR L 103 THR L 106 1 O THR L 106 N VAL L 10 SHEET 3 AA6 5 ASP L 84 ASP L 91 -1 N TYR L 85 O THR L 103 SHEET 4 AA6 5 HIS L 33 GLN L 37 -1 N HIS L 33 O GLN L 88 SHEET 5 AA6 5 LEU L 44 ILE L 47 -1 O LEU L 44 N GLN L 36 SHEET 1 AA7 4 SER L 9 SER L 11 0 SHEET 2 AA7 4 THR L 103 THR L 106 1 O THR L 106 N VAL L 10 SHEET 3 AA7 4 ASP L 84 ASP L 91 -1 N TYR L 85 O THR L 103 SHEET 4 AA7 4 GLN L 96 PHE L 99 -1 O VAL L 98 N VAL L 89 SHEET 1 AA8 3 ALA L 18 CYS L 22 0 SHEET 2 AA8 3 ALA L 70 ILE L 74 -1 O ALA L 70 N CYS L 22 SHEET 3 AA8 3 VAL L 61 GLY L 63 -1 N SER L 62 O THR L 73 SSBOND 1 CYS B 107 CYS B 138 1555 1555 2.02 SSBOND 2 CYS B 121 CYS A 147 1555 1555 2.03 SSBOND 3 CYS B 124 CYS B 137 1555 1555 2.03 SSBOND 4 CYS B 139 CYS B 149 1555 1555 2.03 SSBOND 5 CYS B 147 CYS A 121 1555 1555 2.04 SSBOND 6 CYS A 107 CYS A 138 1555 1555 2.03 SSBOND 7 CYS A 139 CYS A 149 1555 1555 2.03 SSBOND 8 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 9 CYS L 22 CYS L 87 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 433 TRP B 163 TER 815 SER A 167 TER 1751 PRO H 123 TER 2538 LEU L 108 CONECT 97 249 CONECT 187 649 CONECT 211 243 CONECT 243 211 CONECT 249 97 CONECT 255 323 CONECT 310 562 CONECT 323 255 CONECT 533 618 CONECT 562 310 CONECT 618 533 CONECT 624 662 CONECT 649 187 CONECT 662 624 CONECT 965 1555 CONECT 1555 965 CONECT 1897 2379 CONECT 2379 1897 MASTER 692 0 0 7 34 0 0 6 2534 4 18 71 END