HEADER TRANSFERASE 03-AUG-24 9J0V TITLE CRYSTAL STRUCTURE OF MONOMERIC PLP-DEPENDENT TRANSAMINASE FROM TITLE 2 DESULFOBACULA TOLUOLICA IN P 21 21 21 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DAT: PREDICTED D-ALANINE AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AMINOTRANSFERASE CLASS IV; COMPND 5 EC: 2.6.1.21; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOBACULA TOLUOLICA; SOURCE 3 ORGANISM_TAXID: 28223; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DAAT, D-AMINO ACID TRANSAMINASE, TA, MONOMERIC TA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.O.MATYUTA,A.K.BAKUNOVA,A.Y.NIKOLAEVA,T.V.RAKITINA,E.Y.BEZSUDNOVA, AUTHOR 2 V.O.POPOV,K.M.BOYKO REVDAT 1 18-SEP-24 9J0V 0 JRNL AUTH I.O.MATYUTA,A.K.BAKUNOVA,A.Y.NIKOLAEVA,T.V.RAKITINA, JRNL AUTH 2 V.O.POPOV,E.Y.BEZSUDNOVA,K.M.BOYKO JRNL TITL HIGH/LOW RESOLUTION MONOMERIC PLP-DEPENDENT TRANSAMINASE JRNL TITL 2 FROM DESULFOBACULA TOLUOLICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 23150 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1146 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1661 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1872 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 98 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : -0.80000 REMARK 3 B33 (A**2) : 0.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.205 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1933 ; 0.016 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1872 ; 0.003 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2614 ; 2.100 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4292 ; 1.501 ; 1.570 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ; 7.366 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;31.653 ;21.798 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 333 ;15.413 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;18.155 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 265 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2158 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 424 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 983 ; 4.776 ; 3.872 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 982 ; 4.779 ; 3.869 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1227 ; 6.148 ; 5.792 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1228 ; 6.146 ; 5.796 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 950 ; 5.892 ; 4.317 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 951 ; 5.889 ; 4.320 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1388 ; 7.953 ; 6.252 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2095 ; 9.664 ;46.061 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2075 ; 9.677 ;45.935 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9J0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050037. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.88560 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24352 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 40.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M AMMONIUM ACETATE, 0.1M BIS-TRIS REMARK 280 PH 5.5, 17% PEG 10000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.92350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.31250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.11300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.31250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.92350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.11300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ARG A 3 REMARK 465 GLU A 4 REMARK 465 ALA A 5 REMARK 465 ILE A 6 REMARK 465 HIS A 7 REMARK 465 ASN A 8 REMARK 465 PHE A 9 REMARK 465 PHE A 10 REMARK 465 VAL A 11 REMARK 465 ALA A 12 REMARK 465 ASN A 13 REMARK 465 GLN A 14 REMARK 465 ILE A 15 REMARK 465 ILE A 16 REMARK 465 LYS A 17 REMARK 465 SER A 18 REMARK 465 THR A 19 REMARK 465 ALA A 20 REMARK 465 ASP A 21 REMARK 465 MET A 22 REMARK 465 ALA A 23 REMARK 465 ILE A 24 REMARK 465 PHE A 25 REMARK 465 ASP A 26 REMARK 465 LYS A 27 REMARK 465 VAL A 28 REMARK 465 PRO A 29 REMARK 465 ALA A 30 REMARK 465 LYS A 277 REMARK 465 ARG A 278 REMARK 465 ALA A 279 REMARK 465 ARG A 280 REMARK 465 LYS A 281 REMARK 465 VAL A 282 REMARK 465 TYR A 283 REMARK 465 VAL A 284 REMARK 465 ASN A 285 REMARK 465 ASP A 286 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 31 OG1 CG2 REMARK 470 ARG A 64 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 ASN A 83 CG OD1 ND2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 CYS A 85 SG REMARK 470 ASN A 98 CG OD1 ND2 REMARK 470 GLU A 99 CD OE1 OE2 REMARK 470 LYS A 100 CE NZ REMARK 470 PHE A 112 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 140 CD CE NZ REMARK 470 LYS A 148 NZ REMARK 470 GLU A 164 CG CD OE1 OE2 REMARK 470 ARG A 221 NH1 REMARK 470 LYS A 266 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 258 CD - NE - CZ ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 258 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 64 140.10 -35.88 REMARK 500 LYS A 84 -52.23 80.81 REMARK 500 SER A 115 -66.78 -12.74 REMARK 500 THR A 169 -63.31 -101.26 REMARK 500 ARG A 173 25.79 -140.80 REMARK 500 ASP A 237 -129.33 44.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 9J0V A 1 286 UNP K0NPP0 K0NPP0_DESTT 1 286 SEQRES 1 A 286 MET LYS ARG GLU ALA ILE HIS ASN PHE PHE VAL ALA ASN SEQRES 2 A 286 GLN ILE ILE LYS SER THR ALA ASP MET ALA ILE PHE ASP SEQRES 3 A 286 LYS VAL PRO ALA THR ALA ILE TYR GLU VAL MET GLN VAL SEQRES 4 A 286 ARG GLN GLY ILE PRO LEU PHE PHE GLU ALA HIS LEU GLU SEQRES 5 A 286 ARG PHE VAL MET SER ALA SER LEU VAL GLY THR ARG ILE SEQRES 6 A 286 PRO LYS LYS GLU ALA GLU ILE LEU HIS ASN ILE ALA ASP SEQRES 7 A 286 LEU VAL GLU LYS ASN LYS CYS ASP HIS GLY ASN VAL LYS SEQRES 8 A 286 LEU VAL SER ALA LEU MET ASN GLU LYS GLU ILE PHE LEU SEQRES 9 A 286 ALA TYR PHE ILE PRO ALA GLU PHE LEU ASP SER LYS ALA SEQRES 10 A 286 ARG LEU GLU GLY VAL HIS THR ILE LEU PHE SER GLY GLU SEQRES 11 A 286 ARG ILE CYS PRO ASN ILE LYS THR ILE LYS GLY SER PHE SEQRES 12 A 286 ARG GLU GLN VAL LYS ALA VAL ARG GLU SER SER ASN ALA SEQRES 13 A 286 TYR GLU ALA LEU LEU VAL ASN GLU SER GLY HIS ILE THR SEQRES 14 A 286 GLU GLY SER ARG SER ASN VAL PHE PHE MET GLY LYS ASP SEQRES 15 A 286 ASN LYS LEU TYR THR SER PRO ALA GLY SER VAL LEU LYS SEQRES 16 A 286 GLY VAL THR ARG THR HIS VAL MET GLN ILE CYS SER ARG SEQRES 17 A 286 LEU GLY LEU GLU VAL LEU GLU LYS THR VAL HIS THR ARG SEQRES 18 A 286 ASN LEU ALA ASP ILE GLN GLY ALA PHE ILE THR GLY THR SEQRES 19 A 286 THR VAL ASP VAL THR PRO VAL ARG SER ILE GLY ASN THR SEQRES 20 A 286 GLN LEU ASP SER PRO ASN ILE PRO LEU ILE ARG LYS ILE SEQRES 21 A 286 VAL ALA GLU TYR GLU LYS LYS ILE ALA GLY TYR VAL SER SEQRES 22 A 286 LYS ARG LEU LYS ARG ALA ARG LYS VAL TYR VAL ASN ASP HET PLP A 301 15 HET PEG A 302 7 HET GOL A 303 6 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 PEG C4 H10 O3 FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *98(H2 O) HELIX 1 AA1 PHE A 46 GLY A 62 1 17 HELIX 2 AA2 LYS A 68 LYS A 84 1 17 HELIX 3 AA3 ASP A 114 GLY A 121 1 8 HELIX 4 AA4 PHE A 143 ASN A 155 1 13 HELIX 5 AA5 PRO A 189 VAL A 193 5 5 HELIX 6 AA6 GLY A 196 LEU A 209 1 14 HELIX 7 AA7 HIS A 219 ALA A 224 5 6 HELIX 8 AA8 ASP A 250 ASN A 253 5 4 HELIX 9 AA9 ILE A 254 LEU A 276 1 23 SHEET 1 AA1 4 ILE A 43 PRO A 44 0 SHEET 2 AA1 4 ALA A 32 ARG A 40 -1 N ARG A 40 O ILE A 43 SHEET 3 AA1 4 GLY A 88 MET A 97 -1 O GLY A 88 N VAL A 39 SHEET 4 AA1 4 LYS A 100 ILE A 108 -1 O LYS A 100 N MET A 97 SHEET 1 AA2 8 VAL A 213 GLU A 215 0 SHEET 2 AA2 8 LEU A 185 THR A 187 1 N LEU A 185 O LEU A 214 SHEET 3 AA2 8 SER A 174 GLY A 180 -1 N PHE A 178 O TYR A 186 SHEET 4 AA2 8 ILE A 168 GLY A 171 -1 N GLY A 171 O SER A 174 SHEET 5 AA2 8 GLU A 158 VAL A 162 -1 N LEU A 161 O GLU A 170 SHEET 6 AA2 8 VAL A 122 SER A 128 1 N ILE A 125 O LEU A 160 SHEET 7 AA2 8 ASP A 237 ILE A 244 1 O PRO A 240 N VAL A 122 SHEET 8 AA2 8 THR A 247 GLN A 248 -1 O THR A 247 N ILE A 244 SHEET 1 AA3 6 VAL A 213 GLU A 215 0 SHEET 2 AA3 6 LEU A 185 THR A 187 1 N LEU A 185 O LEU A 214 SHEET 3 AA3 6 SER A 174 GLY A 180 -1 N PHE A 178 O TYR A 186 SHEET 4 AA3 6 ILE A 226 GLY A 233 -1 O GLN A 227 N MET A 179 SHEET 5 AA3 6 ASP A 237 ILE A 244 -1 O VAL A 241 N ALA A 229 SHEET 6 AA3 6 THR A 247 GLN A 248 -1 O THR A 247 N ILE A 244 LINK NZ LYS A 137 C4A PLP A 301 1555 1555 1.32 CRYST1 37.847 56.226 118.625 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026422 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017785 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008430 0.00000