HEADER UNKNOWN FUNCTION 12-AUG-24 9J5H TITLE SOLUTION STRUCTURE OF DISULFIDE-DIRECTED MULTICYCLIC PEPTIDES WITH TITLE 2 AFFINITY TO PDL1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: P1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS DISULFIDE-DIRECTED MULTICYCLIC PEPTIDES, PDL1, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR S.H.FAN,C.L.WU REVDAT 2 26-FEB-25 9J5H 1 JRNL REVDAT 1 19-FEB-25 9J5H 0 JRNL AUTH S.FAN,J.LI,J.ZHUANG,Q.ZHOU,Y.MAI,B.LIN,M.W.WANG,C.WU JRNL TITL DISULFIDE-DIRECTED MULTICYCLIC PEPTIDES WITH N-TERMINALLY JRNL TITL 2 EXTENDABLE ALPHA-HELICES FOR RECOGNITION AND ACTIVATION OF G JRNL TITL 3 PROTEIN-COUPLED RECEPTORS. JRNL REF J.AM.CHEM.SOC. V. 147 4821 2025 JRNL REFN ESSN 1520-5126 JRNL PMID 39688263 JRNL DOI 10.1021/JACS.4C12808 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9J5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1300050379. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM P1, 50% PERDEUTERATED REMARK 210 ACETONITRILE AND 50% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-13C HSQC; 2D 1H-15N HSQC; REMARK 210 2D 1H-1H NOESY; 2D 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRFAM-SPARKY, ARIA, TOPSPIN REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 -8.27 73.04 REMARK 500 1 ILE A 21 -60.15 -98.95 REMARK 500 2 ILE A 21 -62.25 -101.89 REMARK 500 3 ILE A 21 -61.03 -90.07 REMARK 500 4 ILE A 21 -60.07 -102.39 REMARK 500 4 HIS A 31 42.34 -104.78 REMARK 500 5 HIS A 31 33.25 -96.96 REMARK 500 8 ILE A 21 -60.57 -95.74 REMARK 500 9 ILE A 21 -61.44 -99.66 REMARK 500 9 HIS A 31 41.47 -102.53 REMARK 500 10 ILE A 21 -60.27 -101.26 REMARK 500 10 HIS A 31 43.90 -98.06 REMARK 500 10 CYS A 33 79.50 -151.75 REMARK 500 10 PRO A 34 32.43 -82.12 REMARK 500 11 ILE A 21 -61.04 -101.97 REMARK 500 11 HIS A 31 41.22 -96.90 REMARK 500 11 PRO A 34 30.64 -94.30 REMARK 500 12 ILE A 21 -61.01 -98.08 REMARK 500 13 HIS A 31 43.63 -140.81 REMARK 500 13 PRO A 34 44.00 -90.22 REMARK 500 14 CYS A 33 85.90 -153.26 REMARK 500 14 PRO A 34 41.14 -88.49 REMARK 500 15 ILE A 21 -61.61 -101.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36689 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF DISULFIDE-DIRECTED MULTICYCLIC PEPTIDES WITH REMARK 900 AFFINITY TO PDL1 DBREF 9J5H A 1 35 PDB 9J5H 9J5H 1 35 SEQRES 1 A 35 SER ASP GLU MET TRP PHE CYS GLU THR LEU ARG ARG LEU SEQRES 2 A 35 LEU CYS PRO LYS SER CYS SER ILE GLU GLY GLY CYS PRO SEQRES 3 A 35 GLU VAL CYS SER HIS MET CYS PRO LEU HELIX 1 AA1 ASP A 2 CYS A 15 1 14 HELIX 2 AA2 LYS A 17 GLU A 22 1 6 HELIX 3 AA3 PRO A 26 CYS A 33 5 8 SSBOND 1 CYS A 7 CYS A 33 1555 1555 2.03 SSBOND 2 CYS A 15 CYS A 29 1555 1555 2.03 SSBOND 3 CYS A 19 CYS A 25 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 527 LEU A 35 ENDMDL MODEL 2 TER 527 LEU A 35 ENDMDL MODEL 3 TER 527 LEU A 35 ENDMDL MODEL 4 TER 527 LEU A 35 ENDMDL MODEL 5 TER 527 LEU A 35 ENDMDL MODEL 6 TER 527 LEU A 35 ENDMDL MODEL 7 TER 527 LEU A 35 ENDMDL MODEL 8 TER 527 LEU A 35 ENDMDL MODEL 9 TER 527 LEU A 35 ENDMDL MODEL 10 TER 527 LEU A 35 ENDMDL MODEL 11 TER 527 LEU A 35 ENDMDL MODEL 12 TER 527 LEU A 35 ENDMDL MODEL 13 TER 527 LEU A 35 ENDMDL MODEL 14 TER 527 LEU A 35 ENDMDL MODEL 15 TER 527 LEU A 35 ENDMDL CONECT 107 488 CONECT 251 432 CONECT 308 377 CONECT 377 308 CONECT 432 251 CONECT 488 107 MASTER 122 0 0 3 0 0 0 6 270 1 6 3 END