data_9J8G # _entry.id 9J8G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9J8G pdb_00009j8g 10.2210/pdb9j8g/pdb WWPDB D_1300050609 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-06-25 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9J8G _pdbx_database_status.recvd_initial_deposition_date 2024-08-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 9j89 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email chunzhou@zju.edu.cn _pdbx_contact_author.name_first Chun _pdbx_contact_author.name_last Zhou _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-9257-468X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gao, A.M.' 1 ? 'Zhoiu, C.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Cell _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-2765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 85 _citation.language ? _citation.page_first 1790 _citation.page_last 1805.e7 _citation.title 'ZBP1 senses spliceosome stress through Z-RNA:DNA hybrid recognition.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2025.04.004 _citation.pdbx_database_id_PubMed 40267921 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, J.' 1 ? primary 'Zhu, Y.' 2 ? primary 'Tian, Z.' 3 ? primary 'Liu, M.' 4 ? primary 'Gao, A.' 5 ? primary 'Fu, W.' 6 ? primary 'Lu, F.' 7 ? primary 'Sun, Y.' 8 ? primary 'Guo, Y.' 9 ? primary 'Pan, R.' 10 ? primary 'Ji, Y.' 11 ? primary 'Chen, J.' 12 ? primary 'Lu, H.' 13 ? primary 'Lin, J.' 14 ? primary 'Liang, X.' 15 ? primary 'Kim, C.' 16 ? primary 'Zhou, C.' 17 ? primary 'Jiao, H.' 18 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Z-DNA-binding protein 1' 6556.586 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*CP*AP*CP*GP*CP*A)-3') ; 1778.208 1 ? ? ? ? 3 polymer syn ;RNA (5'-R(P*UP*GP*CP*GP*UP*G)-3') ; 1908.173 1 ? ? ? ? 4 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA-dependent activator of IFN-regulatory factors,DAI,Tumor stroma and activated macrophage protein DLM-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no DNLEQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDRVSSPEPATWSIGG DNLEQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDRVSSPEPATWSIGG A ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DG)(DC)(DA)' CACGCA C ? 3 polyribonucleotide no no UGCGUG UGCGUG B ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ASN n 1 3 LEU n 1 4 GLU n 1 5 GLN n 1 6 LYS n 1 7 ILE n 1 8 LEU n 1 9 GLN n 1 10 VAL n 1 11 LEU n 1 12 SER n 1 13 ASP n 1 14 ASP n 1 15 GLY n 1 16 GLY n 1 17 PRO n 1 18 VAL n 1 19 LYS n 1 20 ILE n 1 21 GLY n 1 22 GLN n 1 23 LEU n 1 24 VAL n 1 25 LYS n 1 26 LYS n 1 27 CYS n 1 28 GLN n 1 29 VAL n 1 30 PRO n 1 31 LYS n 1 32 LYS n 1 33 THR n 1 34 LEU n 1 35 ASN n 1 36 GLN n 1 37 VAL n 1 38 LEU n 1 39 TYR n 1 40 ARG n 1 41 LEU n 1 42 LYS n 1 43 LYS n 1 44 GLU n 1 45 ASP n 1 46 ARG n 1 47 VAL n 1 48 SER n 1 49 SER n 1 50 PRO n 1 51 GLU n 1 52 PRO n 1 53 ALA n 1 54 THR n 1 55 TRP n 1 56 SER n 1 57 ILE n 1 58 GLY n 1 59 GLY n 2 1 DC n 2 2 DA n 2 3 DC n 2 4 DG n 2 5 DC n 2 6 DA n 3 1 U n 3 2 G n 3 3 C n 3 4 G n 3 5 U n 3 6 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 59 _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Zbp1, Dlm1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 6 'Homo sapiens' ? 9606 ? 3 1 sample 1 6 'Homo sapiens' ? 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 12 12 ASP ASP A . n A 1 2 ASN 2 13 13 ASN ASN A . n A 1 3 LEU 3 14 14 LEU LEU A . n A 1 4 GLU 4 15 15 GLU GLU A . n A 1 5 GLN 5 16 16 GLN GLN A . n A 1 6 LYS 6 17 17 LYS LYS A . n A 1 7 ILE 7 18 18 ILE ILE A . n A 1 8 LEU 8 19 19 LEU LEU A . n A 1 9 GLN 9 20 20 GLN GLN A . n A 1 10 VAL 10 21 21 VAL VAL A . n A 1 11 LEU 11 22 22 LEU LEU A . n A 1 12 SER 12 23 23 SER SER A . n A 1 13 ASP 13 24 24 ASP ASP A . n A 1 14 ASP 14 25 25 ASP ASP A . n A 1 15 GLY 15 26 26 GLY GLY A . n A 1 16 GLY 16 27 27 GLY GLY A . n A 1 17 PRO 17 28 28 PRO PRO A . n A 1 18 VAL 18 29 29 VAL VAL A . n A 1 19 LYS 19 30 30 LYS LYS A . n A 1 20 ILE 20 31 31 ILE ILE A . n A 1 21 GLY 21 32 32 GLY GLY A . n A 1 22 GLN 22 33 33 GLN GLN A . n A 1 23 LEU 23 34 34 LEU LEU A . n A 1 24 VAL 24 35 35 VAL VAL A . n A 1 25 LYS 25 36 36 LYS LYS A . n A 1 26 LYS 26 37 37 LYS LYS A . n A 1 27 CYS 27 38 38 CYS CYS A . n A 1 28 GLN 28 39 39 GLN GLN A . n A 1 29 VAL 29 40 40 VAL VAL A . n A 1 30 PRO 30 41 41 PRO PRO A . n A 1 31 LYS 31 42 42 LYS LYS A . n A 1 32 LYS 32 43 43 LYS LYS A . n A 1 33 THR 33 44 44 THR THR A . n A 1 34 LEU 34 45 45 LEU LEU A . n A 1 35 ASN 35 46 46 ASN ASN A . n A 1 36 GLN 36 47 47 GLN GLN A . n A 1 37 VAL 37 48 48 VAL VAL A . n A 1 38 LEU 38 49 49 LEU LEU A . n A 1 39 TYR 39 50 50 TYR TYR A . n A 1 40 ARG 40 51 51 ARG ARG A . n A 1 41 LEU 41 52 52 LEU LEU A . n A 1 42 LYS 42 53 53 LYS LYS A . n A 1 43 LYS 43 54 54 LYS LYS A . n A 1 44 GLU 44 55 55 GLU GLU A . n A 1 45 ASP 45 56 56 ASP ASP A . n A 1 46 ARG 46 57 57 ARG ARG A . n A 1 47 VAL 47 58 58 VAL VAL A . n A 1 48 SER 48 59 59 SER SER A . n A 1 49 SER 49 60 60 SER SER A . n A 1 50 PRO 50 61 61 PRO PRO A . n A 1 51 GLU 51 62 62 GLU GLU A . n A 1 52 PRO 52 63 63 PRO PRO A . n A 1 53 ALA 53 64 64 ALA ALA A . n A 1 54 THR 54 65 65 THR THR A . n A 1 55 TRP 55 66 66 TRP TRP A . n A 1 56 SER 56 67 67 SER SER A . n A 1 57 ILE 57 68 68 ILE ILE A . n A 1 58 GLY 58 69 69 GLY GLY A . n A 1 59 GLY 59 70 ? ? ? A . n B 2 1 DC 1 201 201 DC DC C . n B 2 2 DA 2 202 202 DA DA C . n B 2 3 DC 3 203 203 DC DC C . n B 2 4 DG 4 204 204 DG DG C . n B 2 5 DC 5 205 205 DC DC C . n B 2 6 DA 6 206 206 DA DA C . n C 3 1 U 1 1 1 U U B . n C 3 2 G 2 2 2 G G B . n C 3 3 C 3 3 3 C C B . n C 3 4 G 4 4 4 G G B . n C 3 5 U 5 5 5 U U B . n C 3 6 G 6 6 6 G G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 101 1 HOH HOH A . D 4 HOH 2 102 21 HOH HOH A . D 4 HOH 3 103 7 HOH HOH A . D 4 HOH 4 104 6 HOH HOH A . D 4 HOH 5 105 13 HOH HOH A . D 4 HOH 6 106 17 HOH HOH A . D 4 HOH 7 107 8 HOH HOH A . D 4 HOH 8 108 9 HOH HOH A . D 4 HOH 9 109 4 HOH HOH A . D 4 HOH 10 110 5 HOH HOH A . D 4 HOH 11 111 11 HOH HOH A . D 4 HOH 12 112 22 HOH HOH A . D 4 HOH 13 113 33 HOH HOH A . D 4 HOH 14 114 30 HOH HOH A . D 4 HOH 15 115 32 HOH HOH A . D 4 HOH 16 116 10 HOH HOH A . D 4 HOH 17 117 31 HOH HOH A . D 4 HOH 18 118 12 HOH HOH A . D 4 HOH 19 119 35 HOH HOH A . D 4 HOH 20 120 37 HOH HOH A . E 4 HOH 1 301 14 HOH HOH C . E 4 HOH 2 302 24 HOH HOH C . E 4 HOH 3 303 29 HOH HOH C . E 4 HOH 4 304 18 HOH HOH C . E 4 HOH 5 305 26 HOH HOH C . E 4 HOH 6 306 20 HOH HOH C . F 4 HOH 1 101 2 HOH HOH B . F 4 HOH 2 102 23 HOH HOH B . F 4 HOH 3 103 36 HOH HOH B . F 4 HOH 4 104 19 HOH HOH B . F 4 HOH 5 105 16 HOH HOH B . F 4 HOH 6 106 28 HOH HOH B . F 4 HOH 7 107 15 HOH HOH B . F 4 HOH 8 108 3 HOH HOH B . F 4 HOH 9 109 27 HOH HOH B . F 4 HOH 10 110 25 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 12 ? CG ? A ASP 1 CG 2 1 Y 1 A ASP 12 ? OD1 ? A ASP 1 OD1 3 1 Y 1 A ASP 12 ? OD2 ? A ASP 1 OD2 4 1 Y 1 A LYS 42 ? CD ? A LYS 31 CD 5 1 Y 1 A LYS 42 ? CE ? A LYS 31 CE 6 1 Y 1 A LYS 42 ? NZ ? A LYS 31 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.21rc1_4924: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 9J8G _cell.details ? _cell.formula_units_Z ? _cell.length_a 63.381 _cell.length_a_esd ? _cell.length_b 63.381 _cell.length_b_esd ? _cell.length_c 71.150 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9J8G _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9J8G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 278 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-05-11 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97907 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97907 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9J8G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 43.46 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14810 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.89 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.17 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.09103 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.94 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1580 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.811 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.8394 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9J8G _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.80 _refine.ls_d_res_low 43.46 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14810 _refine.ls_number_reflns_R_free 728 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.89 _refine.ls_percent_reflns_R_free 4.92 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2025 _refine.ls_R_factor_R_free 0.2344 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2008 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.29 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.22 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 43.46 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 735 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 449 _refine_hist.pdbx_number_atoms_nucleic_acid 250 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? ? ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.035 ? ? ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.604 ? 186 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.066 ? 126 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 90 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.80 1.94 . . 146 2787 99.00 . . . . 0.2794 . . . . . . . . . . . 0.3186 'X-RAY DIFFRACTION' 1.94 2.13 . . 128 2833 100.00 . . . . 0.2368 . . . . . . . . . . . 0.2956 'X-RAY DIFFRACTION' 2.13 2.44 . . 154 2834 100.00 . . . . 0.2318 . . . . . . . . . . . 0.2694 'X-RAY DIFFRACTION' 2.44 3.08 . . 145 2808 100.00 . . . . 0.2243 . . . . . . . . . . . 0.2677 'X-RAY DIFFRACTION' 3.08 43.46 . . 155 2820 100.00 . . . . 0.1694 . . . . . . . . . . . 0.2011 # _struct.entry_id 9J8G _struct.title 'mouse zbp1 hybrid complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9J8G _struct_keywords.text 'zbp1, DNA BINDING PROTEIN/DNA/RNA, DNA BINDING PROTEIN-DNA-RNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP ZBP1_MOUSE Q9QY24 ? 1 DNLEQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDRVSSPEPATWSIGG 12 2 PDB 9J8G 9J8G ? 2 ? 1 3 PDB 9J8G 9J8G ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9J8G A 1 ? 59 ? Q9QY24 12 ? 70 ? 12 70 2 2 9J8G C 1 ? 6 ? 9J8G 201 ? 206 ? 201 206 3 3 9J8G B 1 ? 6 ? 9J8G 1 ? 6 ? 1 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 1 2 A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_445 -y-1,-x-1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 -31.6905000000 -0.8660254038 -0.5000000000 0.0000000000 -54.8895561173 0.0000000000 0.0000000000 -1.0000000000 11.8583333333 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 1 ? GLY A 15 ? ASP A 12 GLY A 26 1 ? 15 HELX_P HELX_P2 AA2 ILE A 20 ? GLN A 28 ? ILE A 31 GLN A 39 1 ? 9 HELX_P HELX_P3 AA3 PRO A 30 ? GLU A 44 ? PRO A 41 GLU A 55 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C U 1 N3 B ? ? 1_555 C G 6 O6 B ? B U 1 B G 6 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog2 hydrog ? ? C U 1 O2 B ? ? 1_555 C G 6 N1 B ? B U 1 B G 6 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? C G 2 N1 B ? ? 1_555 C U 5 O2 B ? B G 2 B U 5 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? C G 2 O6 B ? ? 1_555 C U 5 N3 B ? B G 2 B U 5 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? C C 3 N3 B ? ? 1_555 C G 4 N1 B ? B C 3 B G 4 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C C 3 N4 B ? ? 1_555 C G 4 O6 B ? B C 3 B G 4 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C C 3 O2 B ? ? 1_555 C G 4 N2 B ? B C 3 B G 4 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C G 4 N1 B ? ? 1_555 C C 3 N3 B ? B G 4 B C 3 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C G 4 N2 B ? ? 1_555 C C 3 O2 B ? B G 4 B C 3 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C G 4 O6 B ? ? 1_555 C C 3 N4 B ? B G 4 B C 3 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C U 5 N3 B ? ? 1_555 C G 2 O6 B ? B U 5 B G 2 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog12 hydrog ? ? C U 5 O2 B ? ? 1_555 C G 2 N1 B ? B U 5 B G 2 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? C G 6 N1 B ? ? 1_555 C U 1 O2 B ? B G 6 B U 1 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? C G 6 O6 B ? ? 1_555 C U 1 N3 B ? B G 6 B U 1 10_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? B DC 1 N4 A ? ? 1_555 B DA 6 N1 A ? C DC 201 C DA 206 10_445 ? ? ? ? ? ? 'DC-DA MISPAIR' ? ? ? hydrog16 hydrog ? ? B DA 2 N6 A ? ? 1_555 B DC 5 N3 A ? C DA 202 C DC 205 10_445 ? ? ? ? ? ? 'DA-DC MISPAIR' ? ? ? hydrog17 hydrog ? ? B DC 3 N3 A ? ? 1_555 B DG 4 N1 A ? C DC 203 C DG 204 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 3 N4 A ? ? 1_555 B DG 4 O6 A ? C DC 203 C DG 204 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 3 O2 A ? ? 1_555 B DG 4 N2 A ? C DC 203 C DG 204 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 4 N1 A ? ? 1_555 B DC 3 N3 A ? C DG 204 C DC 203 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 4 N2 A ? ? 1_555 B DC 3 O2 A ? C DG 204 C DC 203 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 4 O6 A ? ? 1_555 B DC 3 N4 A ? C DG 204 C DC 203 10_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 5 N3 A ? ? 1_555 B DA 2 N6 A ? C DC 205 C DA 202 10_445 ? ? ? ? ? ? 'DC-DA MISPAIR' ? ? ? hydrog24 hydrog ? ? B DA 6 N1 A ? ? 1_555 B DC 1 N4 A ? C DA 206 C DC 201 10_445 ? ? ? ? ? ? 'DA-DC MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 18 ? LYS A 19 ? VAL A 29 LYS A 30 AA1 2 THR A 54 ? ILE A 57 ? THR A 65 ILE A 68 AA1 3 VAL A 47 ? GLU A 51 ? VAL A 58 GLU A 62 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 18 ? N VAL A 29 O TRP A 55 ? O TRP A 66 AA1 2 3 O SER A 56 ? O SER A 67 N SER A 48 ? N SER A 59 # _pdbx_entry_details.entry_id 9J8G _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 201 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 A _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 201 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 A _pdbx_validate_rmsd_bond.bond_value 1.381 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.038 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 116 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 4.1753 -13.3392 -0.3666 0.3672 ? -0.0841 ? -0.0274 ? 0.3508 ? 0.0474 ? 0.3795 ? 8.3882 ? 1.7170 ? 6.0715 ? 1.1714 ? 1.3551 ? 5.9131 ? -0.2473 ? 0.4606 ? 1.0268 ? 0.0794 ? -0.1860 ? 0.1513 ? -0.7977 ? 0.1048 ? 0.2010 ? 2 'X-RAY DIFFRACTION' ? refined 2.9999 -17.7006 7.9686 0.2400 ? -0.0921 ? 0.0190 ? 0.3776 ? -0.0102 ? 0.3144 ? 6.7102 ? -0.7417 ? 0.0404 ? 0.9453 ? -0.4575 ? 5.7065 ? 0.0780 ? -0.1696 ? 0.2364 ? 0.1718 ? -0.1286 ? -0.1278 ? -0.0549 ? -0.3298 ? -0.0404 ? 3 'X-RAY DIFFRACTION' ? refined 1.7858 -25.2894 -1.3956 0.4331 ? -0.1694 ? -0.0499 ? 0.3691 ? -0.0284 ? 0.2590 ? 9.2684 ? 1.4651 ? -3.7800 ? 4.5703 ? -1.1911 ? 5.5258 ? -0.2976 ? 0.7228 ? -0.3319 ? -0.6279 ? 0.0249 ? 0.4194 ? 0.6939 ? -0.6533 ? 0.2998 ? 4 'X-RAY DIFFRACTION' ? refined 10.8799 -23.0860 0.1486 0.3328 ? -0.0409 ? 0.0609 ? 0.4157 ? 0.0043 ? 0.3467 ? 4.8000 ? 0.8679 ? -1.7751 ? 7.2736 ? -2.0139 ? 7.2311 ? -0.1188 ? 0.1906 ? 0.0864 ? -0.7381 ? -0.2002 ? -0.9070 ? 0.4669 ? 0.9233 ? 0.2847 ? 5 'X-RAY DIFFRACTION' ? refined 1.2433 -33.9582 4.4329 0.2874 ? -0.0728 ? -0.0250 ? 0.4231 ? -0.0086 ? 0.2979 ? 1.0202 ? -0.3201 ? -0.9815 ? 1.9759 ? -0.6638 ? 1.6334 ? -0.0513 ? -0.2177 ? -0.0805 ? 0.4032 ? -0.2910 ? -0.4008 ? 0.1077 ? 0.2815 ? 0.3310 ? 6 'X-RAY DIFFRACTION' ? refined 0.3391 -33.9416 4.2531 0.4601 ? -0.2200 ? 0.0036 ? 0.4516 ? -0.0848 ? 0.3107 ? 0.5316 ? -0.3188 ? -0.7741 ? 3.1415 ? -0.9395 ? 1.7694 ? -0.2646 ? 0.4457 ? -0.2346 ? 0.1024 ? -0.2678 ? 0.3317 ? 0.1770 ? -0.2797 ? 0.2799 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 12 through 25 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 26 through 41 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 42 through 54 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 55 through 69 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 201 through 206 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1 through 6 ) ; # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 70 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 59 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C OP3 O N N 74 C P P N N 75 C OP1 O N N 76 C OP2 O N N 77 C "O5'" O N N 78 C "C5'" C N N 79 C "C4'" C N R 80 C "O4'" O N N 81 C "C3'" C N S 82 C "O3'" O N N 83 C "C2'" C N R 84 C "O2'" O N N 85 C "C1'" C N R 86 C N1 N N N 87 C C2 C N N 88 C O2 O N N 89 C N3 N N N 90 C C4 C N N 91 C N4 N N N 92 C C5 C N N 93 C C6 C N N 94 C HOP3 H N N 95 C HOP2 H N N 96 C "H5'" H N N 97 C "H5''" H N N 98 C "H4'" H N N 99 C "H3'" H N N 100 C "HO3'" H N N 101 C "H2'" H N N 102 C "HO2'" H N N 103 C "H1'" H N N 104 C H41 H N N 105 C H42 H N N 106 C H5 H N N 107 C H6 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 DA OP3 O N N 123 DA P P N N 124 DA OP1 O N N 125 DA OP2 O N N 126 DA "O5'" O N N 127 DA "C5'" C N N 128 DA "C4'" C N R 129 DA "O4'" O N N 130 DA "C3'" C N S 131 DA "O3'" O N N 132 DA "C2'" C N N 133 DA "C1'" C N R 134 DA N9 N Y N 135 DA C8 C Y N 136 DA N7 N Y N 137 DA C5 C Y N 138 DA C6 C Y N 139 DA N6 N N N 140 DA N1 N Y N 141 DA C2 C Y N 142 DA N3 N Y N 143 DA C4 C Y N 144 DA HOP3 H N N 145 DA HOP2 H N N 146 DA "H5'" H N N 147 DA "H5''" H N N 148 DA "H4'" H N N 149 DA "H3'" H N N 150 DA "HO3'" H N N 151 DA "H2'" H N N 152 DA "H2''" H N N 153 DA "H1'" H N N 154 DA H8 H N N 155 DA H61 H N N 156 DA H62 H N N 157 DA H2 H N N 158 DC OP3 O N N 159 DC P P N N 160 DC OP1 O N N 161 DC OP2 O N N 162 DC "O5'" O N N 163 DC "C5'" C N N 164 DC "C4'" C N R 165 DC "O4'" O N N 166 DC "C3'" C N S 167 DC "O3'" O N N 168 DC "C2'" C N N 169 DC "C1'" C N R 170 DC N1 N N N 171 DC C2 C N N 172 DC O2 O N N 173 DC N3 N N N 174 DC C4 C N N 175 DC N4 N N N 176 DC C5 C N N 177 DC C6 C N N 178 DC HOP3 H N N 179 DC HOP2 H N N 180 DC "H5'" H N N 181 DC "H5''" H N N 182 DC "H4'" H N N 183 DC "H3'" H N N 184 DC "HO3'" H N N 185 DC "H2'" H N N 186 DC "H2''" H N N 187 DC "H1'" H N N 188 DC H41 H N N 189 DC H42 H N N 190 DC H5 H N N 191 DC H6 H N N 192 DG OP3 O N N 193 DG P P N N 194 DG OP1 O N N 195 DG OP2 O N N 196 DG "O5'" O N N 197 DG "C5'" C N N 198 DG "C4'" C N R 199 DG "O4'" O N N 200 DG "C3'" C N S 201 DG "O3'" O N N 202 DG "C2'" C N N 203 DG "C1'" C N R 204 DG N9 N Y N 205 DG C8 C Y N 206 DG N7 N Y N 207 DG C5 C Y N 208 DG C6 C N N 209 DG O6 O N N 210 DG N1 N N N 211 DG C2 C N N 212 DG N2 N N N 213 DG N3 N N N 214 DG C4 C Y N 215 DG HOP3 H N N 216 DG HOP2 H N N 217 DG "H5'" H N N 218 DG "H5''" H N N 219 DG "H4'" H N N 220 DG "H3'" H N N 221 DG "HO3'" H N N 222 DG "H2'" H N N 223 DG "H2''" H N N 224 DG "H1'" H N N 225 DG H8 H N N 226 DG H1 H N N 227 DG H21 H N N 228 DG H22 H N N 229 G OP3 O N N 230 G P P N N 231 G OP1 O N N 232 G OP2 O N N 233 G "O5'" O N N 234 G "C5'" C N N 235 G "C4'" C N R 236 G "O4'" O N N 237 G "C3'" C N S 238 G "O3'" O N N 239 G "C2'" C N R 240 G "O2'" O N N 241 G "C1'" C N R 242 G N9 N Y N 243 G C8 C Y N 244 G N7 N Y N 245 G C5 C Y N 246 G C6 C N N 247 G O6 O N N 248 G N1 N N N 249 G C2 C N N 250 G N2 N N N 251 G N3 N N N 252 G C4 C Y N 253 G HOP3 H N N 254 G HOP2 H N N 255 G "H5'" H N N 256 G "H5''" H N N 257 G "H4'" H N N 258 G "H3'" H N N 259 G "HO3'" H N N 260 G "H2'" H N N 261 G "HO2'" H N N 262 G "H1'" H N N 263 G H8 H N N 264 G H1 H N N 265 G H21 H N N 266 G H22 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HOH O O N N 317 HOH H1 H N N 318 HOH H2 H N N 319 ILE N N N N 320 ILE CA C N S 321 ILE C C N N 322 ILE O O N N 323 ILE CB C N S 324 ILE CG1 C N N 325 ILE CG2 C N N 326 ILE CD1 C N N 327 ILE OXT O N N 328 ILE H H N N 329 ILE H2 H N N 330 ILE HA H N N 331 ILE HB H N N 332 ILE HG12 H N N 333 ILE HG13 H N N 334 ILE HG21 H N N 335 ILE HG22 H N N 336 ILE HG23 H N N 337 ILE HD11 H N N 338 ILE HD12 H N N 339 ILE HD13 H N N 340 ILE HXT H N N 341 LEU N N N N 342 LEU CA C N S 343 LEU C C N N 344 LEU O O N N 345 LEU CB C N N 346 LEU CG C N N 347 LEU CD1 C N N 348 LEU CD2 C N N 349 LEU OXT O N N 350 LEU H H N N 351 LEU H2 H N N 352 LEU HA H N N 353 LEU HB2 H N N 354 LEU HB3 H N N 355 LEU HG H N N 356 LEU HD11 H N N 357 LEU HD12 H N N 358 LEU HD13 H N N 359 LEU HD21 H N N 360 LEU HD22 H N N 361 LEU HD23 H N N 362 LEU HXT H N N 363 LYS N N N N 364 LYS CA C N S 365 LYS C C N N 366 LYS O O N N 367 LYS CB C N N 368 LYS CG C N N 369 LYS CD C N N 370 LYS CE C N N 371 LYS NZ N N N 372 LYS OXT O N N 373 LYS H H N N 374 LYS H2 H N N 375 LYS HA H N N 376 LYS HB2 H N N 377 LYS HB3 H N N 378 LYS HG2 H N N 379 LYS HG3 H N N 380 LYS HD2 H N N 381 LYS HD3 H N N 382 LYS HE2 H N N 383 LYS HE3 H N N 384 LYS HZ1 H N N 385 LYS HZ2 H N N 386 LYS HZ3 H N N 387 LYS HXT H N N 388 PRO N N N N 389 PRO CA C N S 390 PRO C C N N 391 PRO O O N N 392 PRO CB C N N 393 PRO CG C N N 394 PRO CD C N N 395 PRO OXT O N N 396 PRO H H N N 397 PRO HA H N N 398 PRO HB2 H N N 399 PRO HB3 H N N 400 PRO HG2 H N N 401 PRO HG3 H N N 402 PRO HD2 H N N 403 PRO HD3 H N N 404 PRO HXT H N N 405 SER N N N N 406 SER CA C N S 407 SER C C N N 408 SER O O N N 409 SER CB C N N 410 SER OG O N N 411 SER OXT O N N 412 SER H H N N 413 SER H2 H N N 414 SER HA H N N 415 SER HB2 H N N 416 SER HB3 H N N 417 SER HG H N N 418 SER HXT H N N 419 THR N N N N 420 THR CA C N S 421 THR C C N N 422 THR O O N N 423 THR CB C N R 424 THR OG1 O N N 425 THR CG2 C N N 426 THR OXT O N N 427 THR H H N N 428 THR H2 H N N 429 THR HA H N N 430 THR HB H N N 431 THR HG1 H N N 432 THR HG21 H N N 433 THR HG22 H N N 434 THR HG23 H N N 435 THR HXT H N N 436 TRP N N N N 437 TRP CA C N S 438 TRP C C N N 439 TRP O O N N 440 TRP CB C N N 441 TRP CG C Y N 442 TRP CD1 C Y N 443 TRP CD2 C Y N 444 TRP NE1 N Y N 445 TRP CE2 C Y N 446 TRP CE3 C Y N 447 TRP CZ2 C Y N 448 TRP CZ3 C Y N 449 TRP CH2 C Y N 450 TRP OXT O N N 451 TRP H H N N 452 TRP H2 H N N 453 TRP HA H N N 454 TRP HB2 H N N 455 TRP HB3 H N N 456 TRP HD1 H N N 457 TRP HE1 H N N 458 TRP HE3 H N N 459 TRP HZ2 H N N 460 TRP HZ3 H N N 461 TRP HH2 H N N 462 TRP HXT H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 U OP3 O N N 488 U P P N N 489 U OP1 O N N 490 U OP2 O N N 491 U "O5'" O N N 492 U "C5'" C N N 493 U "C4'" C N R 494 U "O4'" O N N 495 U "C3'" C N S 496 U "O3'" O N N 497 U "C2'" C N R 498 U "O2'" O N N 499 U "C1'" C N R 500 U N1 N N N 501 U C2 C N N 502 U O2 O N N 503 U N3 N N N 504 U C4 C N N 505 U O4 O N N 506 U C5 C N N 507 U C6 C N N 508 U HOP3 H N N 509 U HOP2 H N N 510 U "H5'" H N N 511 U "H5''" H N N 512 U "H4'" H N N 513 U "H3'" H N N 514 U "HO3'" H N N 515 U "H2'" H N N 516 U "HO2'" H N N 517 U "H1'" H N N 518 U H3 H N N 519 U H5 H N N 520 U H6 H N N 521 VAL N N N N 522 VAL CA C N S 523 VAL C C N N 524 VAL O O N N 525 VAL CB C N N 526 VAL CG1 C N N 527 VAL CG2 C N N 528 VAL OXT O N N 529 VAL H H N N 530 VAL H2 H N N 531 VAL HA H N N 532 VAL HB H N N 533 VAL HG11 H N N 534 VAL HG12 H N N 535 VAL HG13 H N N 536 VAL HG21 H N N 537 VAL HG22 H N N 538 VAL HG23 H N N 539 VAL HXT H N N 540 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C OP3 P sing N N 70 C OP3 HOP3 sing N N 71 C P OP1 doub N N 72 C P OP2 sing N N 73 C P "O5'" sing N N 74 C OP2 HOP2 sing N N 75 C "O5'" "C5'" sing N N 76 C "C5'" "C4'" sing N N 77 C "C5'" "H5'" sing N N 78 C "C5'" "H5''" sing N N 79 C "C4'" "O4'" sing N N 80 C "C4'" "C3'" sing N N 81 C "C4'" "H4'" sing N N 82 C "O4'" "C1'" sing N N 83 C "C3'" "O3'" sing N N 84 C "C3'" "C2'" sing N N 85 C "C3'" "H3'" sing N N 86 C "O3'" "HO3'" sing N N 87 C "C2'" "O2'" sing N N 88 C "C2'" "C1'" sing N N 89 C "C2'" "H2'" sing N N 90 C "O2'" "HO2'" sing N N 91 C "C1'" N1 sing N N 92 C "C1'" "H1'" sing N N 93 C N1 C2 sing N N 94 C N1 C6 sing N N 95 C C2 O2 doub N N 96 C C2 N3 sing N N 97 C N3 C4 doub N N 98 C C4 N4 sing N N 99 C C4 C5 sing N N 100 C N4 H41 sing N N 101 C N4 H42 sing N N 102 C C5 C6 doub N N 103 C C5 H5 sing N N 104 C C6 H6 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 DA OP3 P sing N N 119 DA OP3 HOP3 sing N N 120 DA P OP1 doub N N 121 DA P OP2 sing N N 122 DA P "O5'" sing N N 123 DA OP2 HOP2 sing N N 124 DA "O5'" "C5'" sing N N 125 DA "C5'" "C4'" sing N N 126 DA "C5'" "H5'" sing N N 127 DA "C5'" "H5''" sing N N 128 DA "C4'" "O4'" sing N N 129 DA "C4'" "C3'" sing N N 130 DA "C4'" "H4'" sing N N 131 DA "O4'" "C1'" sing N N 132 DA "C3'" "O3'" sing N N 133 DA "C3'" "C2'" sing N N 134 DA "C3'" "H3'" sing N N 135 DA "O3'" "HO3'" sing N N 136 DA "C2'" "C1'" sing N N 137 DA "C2'" "H2'" sing N N 138 DA "C2'" "H2''" sing N N 139 DA "C1'" N9 sing N N 140 DA "C1'" "H1'" sing N N 141 DA N9 C8 sing Y N 142 DA N9 C4 sing Y N 143 DA C8 N7 doub Y N 144 DA C8 H8 sing N N 145 DA N7 C5 sing Y N 146 DA C5 C6 sing Y N 147 DA C5 C4 doub Y N 148 DA C6 N6 sing N N 149 DA C6 N1 doub Y N 150 DA N6 H61 sing N N 151 DA N6 H62 sing N N 152 DA N1 C2 sing Y N 153 DA C2 N3 doub Y N 154 DA C2 H2 sing N N 155 DA N3 C4 sing Y N 156 DC OP3 P sing N N 157 DC OP3 HOP3 sing N N 158 DC P OP1 doub N N 159 DC P OP2 sing N N 160 DC P "O5'" sing N N 161 DC OP2 HOP2 sing N N 162 DC "O5'" "C5'" sing N N 163 DC "C5'" "C4'" sing N N 164 DC "C5'" "H5'" sing N N 165 DC "C5'" "H5''" sing N N 166 DC "C4'" "O4'" sing N N 167 DC "C4'" "C3'" sing N N 168 DC "C4'" "H4'" sing N N 169 DC "O4'" "C1'" sing N N 170 DC "C3'" "O3'" sing N N 171 DC "C3'" "C2'" sing N N 172 DC "C3'" "H3'" sing N N 173 DC "O3'" "HO3'" sing N N 174 DC "C2'" "C1'" sing N N 175 DC "C2'" "H2'" sing N N 176 DC "C2'" "H2''" sing N N 177 DC "C1'" N1 sing N N 178 DC "C1'" "H1'" sing N N 179 DC N1 C2 sing N N 180 DC N1 C6 sing N N 181 DC C2 O2 doub N N 182 DC C2 N3 sing N N 183 DC N3 C4 doub N N 184 DC C4 N4 sing N N 185 DC C4 C5 sing N N 186 DC N4 H41 sing N N 187 DC N4 H42 sing N N 188 DC C5 C6 doub N N 189 DC C5 H5 sing N N 190 DC C6 H6 sing N N 191 DG OP3 P sing N N 192 DG OP3 HOP3 sing N N 193 DG P OP1 doub N N 194 DG P OP2 sing N N 195 DG P "O5'" sing N N 196 DG OP2 HOP2 sing N N 197 DG "O5'" "C5'" sing N N 198 DG "C5'" "C4'" sing N N 199 DG "C5'" "H5'" sing N N 200 DG "C5'" "H5''" sing N N 201 DG "C4'" "O4'" sing N N 202 DG "C4'" "C3'" sing N N 203 DG "C4'" "H4'" sing N N 204 DG "O4'" "C1'" sing N N 205 DG "C3'" "O3'" sing N N 206 DG "C3'" "C2'" sing N N 207 DG "C3'" "H3'" sing N N 208 DG "O3'" "HO3'" sing N N 209 DG "C2'" "C1'" sing N N 210 DG "C2'" "H2'" sing N N 211 DG "C2'" "H2''" sing N N 212 DG "C1'" N9 sing N N 213 DG "C1'" "H1'" sing N N 214 DG N9 C8 sing Y N 215 DG N9 C4 sing Y N 216 DG C8 N7 doub Y N 217 DG C8 H8 sing N N 218 DG N7 C5 sing Y N 219 DG C5 C6 sing N N 220 DG C5 C4 doub Y N 221 DG C6 O6 doub N N 222 DG C6 N1 sing N N 223 DG N1 C2 sing N N 224 DG N1 H1 sing N N 225 DG C2 N2 sing N N 226 DG C2 N3 doub N N 227 DG N2 H21 sing N N 228 DG N2 H22 sing N N 229 DG N3 C4 sing N N 230 G OP3 P sing N N 231 G OP3 HOP3 sing N N 232 G P OP1 doub N N 233 G P OP2 sing N N 234 G P "O5'" sing N N 235 G OP2 HOP2 sing N N 236 G "O5'" "C5'" sing N N 237 G "C5'" "C4'" sing N N 238 G "C5'" "H5'" sing N N 239 G "C5'" "H5''" sing N N 240 G "C4'" "O4'" sing N N 241 G "C4'" "C3'" sing N N 242 G "C4'" "H4'" sing N N 243 G "O4'" "C1'" sing N N 244 G "C3'" "O3'" sing N N 245 G "C3'" "C2'" sing N N 246 G "C3'" "H3'" sing N N 247 G "O3'" "HO3'" sing N N 248 G "C2'" "O2'" sing N N 249 G "C2'" "C1'" sing N N 250 G "C2'" "H2'" sing N N 251 G "O2'" "HO2'" sing N N 252 G "C1'" N9 sing N N 253 G "C1'" "H1'" sing N N 254 G N9 C8 sing Y N 255 G N9 C4 sing Y N 256 G C8 N7 doub Y N 257 G C8 H8 sing N N 258 G N7 C5 sing Y N 259 G C5 C6 sing N N 260 G C5 C4 doub Y N 261 G C6 O6 doub N N 262 G C6 N1 sing N N 263 G N1 C2 sing N N 264 G N1 H1 sing N N 265 G C2 N2 sing N N 266 G C2 N3 doub N N 267 G N2 H21 sing N N 268 G N2 H22 sing N N 269 G N3 C4 sing N N 270 GLN N CA sing N N 271 GLN N H sing N N 272 GLN N H2 sing N N 273 GLN CA C sing N N 274 GLN CA CB sing N N 275 GLN CA HA sing N N 276 GLN C O doub N N 277 GLN C OXT sing N N 278 GLN CB CG sing N N 279 GLN CB HB2 sing N N 280 GLN CB HB3 sing N N 281 GLN CG CD sing N N 282 GLN CG HG2 sing N N 283 GLN CG HG3 sing N N 284 GLN CD OE1 doub N N 285 GLN CD NE2 sing N N 286 GLN NE2 HE21 sing N N 287 GLN NE2 HE22 sing N N 288 GLN OXT HXT sing N N 289 GLU N CA sing N N 290 GLU N H sing N N 291 GLU N H2 sing N N 292 GLU CA C sing N N 293 GLU CA CB sing N N 294 GLU CA HA sing N N 295 GLU C O doub N N 296 GLU C OXT sing N N 297 GLU CB CG sing N N 298 GLU CB HB2 sing N N 299 GLU CB HB3 sing N N 300 GLU CG CD sing N N 301 GLU CG HG2 sing N N 302 GLU CG HG3 sing N N 303 GLU CD OE1 doub N N 304 GLU CD OE2 sing N N 305 GLU OE2 HE2 sing N N 306 GLU OXT HXT sing N N 307 GLY N CA sing N N 308 GLY N H sing N N 309 GLY N H2 sing N N 310 GLY CA C sing N N 311 GLY CA HA2 sing N N 312 GLY CA HA3 sing N N 313 GLY C O doub N N 314 GLY C OXT sing N N 315 GLY OXT HXT sing N N 316 HOH O H1 sing N N 317 HOH O H2 sing N N 318 ILE N CA sing N N 319 ILE N H sing N N 320 ILE N H2 sing N N 321 ILE CA C sing N N 322 ILE CA CB sing N N 323 ILE CA HA sing N N 324 ILE C O doub N N 325 ILE C OXT sing N N 326 ILE CB CG1 sing N N 327 ILE CB CG2 sing N N 328 ILE CB HB sing N N 329 ILE CG1 CD1 sing N N 330 ILE CG1 HG12 sing N N 331 ILE CG1 HG13 sing N N 332 ILE CG2 HG21 sing N N 333 ILE CG2 HG22 sing N N 334 ILE CG2 HG23 sing N N 335 ILE CD1 HD11 sing N N 336 ILE CD1 HD12 sing N N 337 ILE CD1 HD13 sing N N 338 ILE OXT HXT sing N N 339 LEU N CA sing N N 340 LEU N H sing N N 341 LEU N H2 sing N N 342 LEU CA C sing N N 343 LEU CA CB sing N N 344 LEU CA HA sing N N 345 LEU C O doub N N 346 LEU C OXT sing N N 347 LEU CB CG sing N N 348 LEU CB HB2 sing N N 349 LEU CB HB3 sing N N 350 LEU CG CD1 sing N N 351 LEU CG CD2 sing N N 352 LEU CG HG sing N N 353 LEU CD1 HD11 sing N N 354 LEU CD1 HD12 sing N N 355 LEU CD1 HD13 sing N N 356 LEU CD2 HD21 sing N N 357 LEU CD2 HD22 sing N N 358 LEU CD2 HD23 sing N N 359 LEU OXT HXT sing N N 360 LYS N CA sing N N 361 LYS N H sing N N 362 LYS N H2 sing N N 363 LYS CA C sing N N 364 LYS CA CB sing N N 365 LYS CA HA sing N N 366 LYS C O doub N N 367 LYS C OXT sing N N 368 LYS CB CG sing N N 369 LYS CB HB2 sing N N 370 LYS CB HB3 sing N N 371 LYS CG CD sing N N 372 LYS CG HG2 sing N N 373 LYS CG HG3 sing N N 374 LYS CD CE sing N N 375 LYS CD HD2 sing N N 376 LYS CD HD3 sing N N 377 LYS CE NZ sing N N 378 LYS CE HE2 sing N N 379 LYS CE HE3 sing N N 380 LYS NZ HZ1 sing N N 381 LYS NZ HZ2 sing N N 382 LYS NZ HZ3 sing N N 383 LYS OXT HXT sing N N 384 PRO N CA sing N N 385 PRO N CD sing N N 386 PRO N H sing N N 387 PRO CA C sing N N 388 PRO CA CB sing N N 389 PRO CA HA sing N N 390 PRO C O doub N N 391 PRO C OXT sing N N 392 PRO CB CG sing N N 393 PRO CB HB2 sing N N 394 PRO CB HB3 sing N N 395 PRO CG CD sing N N 396 PRO CG HG2 sing N N 397 PRO CG HG3 sing N N 398 PRO CD HD2 sing N N 399 PRO CD HD3 sing N N 400 PRO OXT HXT sing N N 401 SER N CA sing N N 402 SER N H sing N N 403 SER N H2 sing N N 404 SER CA C sing N N 405 SER CA CB sing N N 406 SER CA HA sing N N 407 SER C O doub N N 408 SER C OXT sing N N 409 SER CB OG sing N N 410 SER CB HB2 sing N N 411 SER CB HB3 sing N N 412 SER OG HG sing N N 413 SER OXT HXT sing N N 414 THR N CA sing N N 415 THR N H sing N N 416 THR N H2 sing N N 417 THR CA C sing N N 418 THR CA CB sing N N 419 THR CA HA sing N N 420 THR C O doub N N 421 THR C OXT sing N N 422 THR CB OG1 sing N N 423 THR CB CG2 sing N N 424 THR CB HB sing N N 425 THR OG1 HG1 sing N N 426 THR CG2 HG21 sing N N 427 THR CG2 HG22 sing N N 428 THR CG2 HG23 sing N N 429 THR OXT HXT sing N N 430 TRP N CA sing N N 431 TRP N H sing N N 432 TRP N H2 sing N N 433 TRP CA C sing N N 434 TRP CA CB sing N N 435 TRP CA HA sing N N 436 TRP C O doub N N 437 TRP C OXT sing N N 438 TRP CB CG sing N N 439 TRP CB HB2 sing N N 440 TRP CB HB3 sing N N 441 TRP CG CD1 doub Y N 442 TRP CG CD2 sing Y N 443 TRP CD1 NE1 sing Y N 444 TRP CD1 HD1 sing N N 445 TRP CD2 CE2 doub Y N 446 TRP CD2 CE3 sing Y N 447 TRP NE1 CE2 sing Y N 448 TRP NE1 HE1 sing N N 449 TRP CE2 CZ2 sing Y N 450 TRP CE3 CZ3 doub Y N 451 TRP CE3 HE3 sing N N 452 TRP CZ2 CH2 doub Y N 453 TRP CZ2 HZ2 sing N N 454 TRP CZ3 CH2 sing Y N 455 TRP CZ3 HZ3 sing N N 456 TRP CH2 HH2 sing N N 457 TRP OXT HXT sing N N 458 TYR N CA sing N N 459 TYR N H sing N N 460 TYR N H2 sing N N 461 TYR CA C sing N N 462 TYR CA CB sing N N 463 TYR CA HA sing N N 464 TYR C O doub N N 465 TYR C OXT sing N N 466 TYR CB CG sing N N 467 TYR CB HB2 sing N N 468 TYR CB HB3 sing N N 469 TYR CG CD1 doub Y N 470 TYR CG CD2 sing Y N 471 TYR CD1 CE1 sing Y N 472 TYR CD1 HD1 sing N N 473 TYR CD2 CE2 doub Y N 474 TYR CD2 HD2 sing N N 475 TYR CE1 CZ doub Y N 476 TYR CE1 HE1 sing N N 477 TYR CE2 CZ sing Y N 478 TYR CE2 HE2 sing N N 479 TYR CZ OH sing N N 480 TYR OH HH sing N N 481 TYR OXT HXT sing N N 482 U OP3 P sing N N 483 U OP3 HOP3 sing N N 484 U P OP1 doub N N 485 U P OP2 sing N N 486 U P "O5'" sing N N 487 U OP2 HOP2 sing N N 488 U "O5'" "C5'" sing N N 489 U "C5'" "C4'" sing N N 490 U "C5'" "H5'" sing N N 491 U "C5'" "H5''" sing N N 492 U "C4'" "O4'" sing N N 493 U "C4'" "C3'" sing N N 494 U "C4'" "H4'" sing N N 495 U "O4'" "C1'" sing N N 496 U "C3'" "O3'" sing N N 497 U "C3'" "C2'" sing N N 498 U "C3'" "H3'" sing N N 499 U "O3'" "HO3'" sing N N 500 U "C2'" "O2'" sing N N 501 U "C2'" "C1'" sing N N 502 U "C2'" "H2'" sing N N 503 U "O2'" "HO2'" sing N N 504 U "C1'" N1 sing N N 505 U "C1'" "H1'" sing N N 506 U N1 C2 sing N N 507 U N1 C6 sing N N 508 U C2 O2 doub N N 509 U C2 N3 sing N N 510 U N3 C4 sing N N 511 U N3 H3 sing N N 512 U C4 O4 doub N N 513 U C4 C5 sing N N 514 U C5 C6 doub N N 515 U C5 H5 sing N N 516 U C6 H6 sing N N 517 VAL N CA sing N N 518 VAL N H sing N N 519 VAL N H2 sing N N 520 VAL CA C sing N N 521 VAL CA CB sing N N 522 VAL CA HA sing N N 523 VAL C O doub N N 524 VAL C OXT sing N N 525 VAL CB CG1 sing N N 526 VAL CB CG2 sing N N 527 VAL CB HB sing N N 528 VAL CG1 HG11 sing N N 529 VAL CG1 HG12 sing N N 530 VAL CG1 HG13 sing N N 531 VAL CG2 HG21 sing N N 532 VAL CG2 HG22 sing N N 533 VAL CG2 HG23 sing N N 534 VAL OXT HXT sing N N 535 # _ndb_struct_conf_na.entry_id 9J8G _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C U 1 1_555 C G 6 10_445 -0.286 -0.185 0.133 5.418 -7.073 -2.669 1 B_U1:G6_B B 1 ? B 6 ? 28 1 1 C G 2 1_555 C U 5 10_445 0.322 -0.528 0.598 0.800 -3.704 0.025 2 B_G2:U5_B B 2 ? B 5 ? 28 1 1 C C 3 1_555 C G 4 10_445 -0.456 -0.395 0.454 11.146 -3.209 0.522 3 B_C3:G4_B B 3 ? B 4 ? 19 1 1 C G 4 1_555 C C 3 10_445 0.456 -0.395 0.454 -11.146 -3.209 0.522 4 B_G4:C3_B B 4 ? B 3 ? 19 1 1 C U 5 1_555 C G 2 10_445 -0.322 -0.528 0.598 -0.800 -3.704 0.025 5 B_U5:G2_B B 5 ? B 2 ? 28 1 1 C G 6 1_555 C U 1 10_445 0.286 -0.185 0.133 -5.418 -7.073 -2.669 6 B_G6:U1_B B 6 ? B 1 ? 28 1 1 B DC 1 1_555 B DA 6 10_445 0.272 0.012 0.136 -2.786 -9.966 -6.228 7 C_DC201:DA206_C C 201 ? C 206 ? ? 1 1 B DA 2 1_555 B DC 5 10_445 0.756 -0.266 -0.426 1.252 -7.239 -0.597 8 C_DA202:DC205_C C 202 ? C 205 ? ? 1 1 B DC 3 1_555 B DG 4 10_445 -0.475 0.202 -0.735 11.711 -3.975 -5.766 9 C_DC203:DG204_C C 203 ? C 204 ? 19 1 1 B DG 4 1_555 B DC 3 10_445 0.475 0.202 -0.735 -11.711 -3.975 -5.766 10 C_DG204:DC203_C C 204 ? C 203 ? 19 1 1 B DC 5 1_555 B DA 2 10_445 -0.756 -0.266 -0.426 -1.252 -7.239 -0.597 11 C_DC205:DA202_C C 205 ? C 202 ? ? 1 1 B DA 6 1_555 B DC 1 10_445 -0.272 0.012 0.136 2.786 -9.966 -6.228 12 C_DA206:DC201_C C 206 ? C 201 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C U 1 1_555 C G 6 10_445 C G 2 1_555 C U 5 10_445 0.084 4.714 3.620 -2.122 -5.061 -9.534 -13.126 -4.372 5.320 27.639 -11.589 -10.998 1 BB_U1G2:U5G6_BB B 1 ? B 6 ? B 2 ? B 5 ? 1 C G 2 1_555 C U 5 10_445 C C 3 1_555 C G 4 10_445 -0.097 -1.401 3.098 1.459 -12.524 -50.055 2.380 -0.022 2.699 14.538 1.693 -51.519 2 BB_G2C3:G4U5_BB B 2 ? B 5 ? B 3 ? B 4 ? 1 C C 3 1_555 C G 4 10_445 C G 4 1_555 C C 3 10_445 0.000 5.383 4.042 0.000 -8.711 -9.908 -6.034 0.000 6.588 41.413 0.000 -13.185 3 BB_C3G4:C3G4_BB B 3 ? B 4 ? B 4 ? B 3 ? 1 C G 4 1_555 C C 3 10_445 C U 5 1_555 C G 2 10_445 0.097 -1.401 3.098 -1.459 -12.524 -50.055 2.380 0.022 2.699 14.538 -1.693 -51.519 4 BB_G4U5:G2C3_BB B 4 ? B 3 ? B 5 ? B 2 ? 1 C U 5 1_555 C G 2 10_445 C G 6 1_555 C U 1 10_445 -0.084 4.714 3.620 2.122 -5.061 -9.534 -13.126 4.372 5.320 27.639 11.589 -10.998 5 BB_U5G6:U1G2_BB B 5 ? B 2 ? B 6 ? B 1 ? 1 B DC 1 1_555 B DA 6 10_445 B DA 2 1_555 B DC 5 10_445 0.223 4.779 3.231 4.103 -11.127 -7.901 -1.704 7.379 5.459 52.955 19.528 -14.242 6 CC_DC201DA202:DC205DA206_CC C 201 ? C 206 ? C 202 ? C 205 ? 1 B DA 2 1_555 B DC 5 10_445 B DC 3 1_555 B DG 4 10_445 -0.123 -1.329 3.159 0.874 -11.912 -49.225 2.334 -0.087 2.789 14.061 1.032 -50.565 7 CC_DA202DC203:DG204DC205_CC C 202 ? C 205 ? C 203 ? C 204 ? 1 B DC 3 1_555 B DG 4 10_445 B DG 4 1_555 B DC 3 10_445 0.000 5.657 3.815 0.000 -8.959 -9.204 -6.273 0.000 6.677 44.318 0.000 -12.838 8 CC_DC203DG204:DC203DG204_CC C 203 ? C 204 ? C 204 ? C 203 ? 1 B DG 4 1_555 B DC 3 10_445 B DC 5 1_555 B DA 2 10_445 0.123 -1.329 3.159 -0.874 -11.912 -49.225 2.334 0.087 2.789 14.061 -1.032 -50.565 9 CC_DG204DC205:DA202DC203_CC C 204 ? C 203 ? C 205 ? C 202 ? 1 B DC 5 1_555 B DA 2 10_445 B DA 6 1_555 B DC 1 10_445 -0.223 4.779 3.231 -4.103 -11.127 -7.901 -1.704 -7.379 5.459 52.955 -19.528 -14.242 10 CC_DC205DA206:DC201DA202_CC C 205 ? C 202 ? C 206 ? C 201 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1j75 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9J8G _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.015778 _atom_sites.fract_transf_matrix[1][2] 0.009109 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018218 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014055 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ # loop_ #