data_9JZI # _entry.id 9JZI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9JZI pdb_00009jzi 10.2210/pdb9jzi/pdb WWPDB D_1300050767 ? ? EMDB EMD-61914 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-03-11 ? 2 'EM metadata' 1 0 2026-03-11 ? 3 FSC 1 0 2026-03-11 ? 4 'Half map' 1 0 2026-03-11 1 5 'Half map' 1 0 2026-03-11 2 6 Image 1 0 2026-03-11 ? 7 Mask 1 0 2026-03-11 1 8 'Primary map' 1 0 2026-03-11 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9JZI _pdbx_database_status.recvd_initial_deposition_date 2024-10-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Tetrameric complex (3D class 1) of the Borna disease virus 1 nucleoprotein bound to RNA' _pdbx_database_related.db_id EMD-61914 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email sugita.yukihiko.8w@kyoto-u.ac.jp _pdbx_contact_author.name_first Yukihiko _pdbx_contact_author.name_last Sugita _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6861-4840 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sugita, Y.' 1 0000-0001-6861-4840 'Hirai, Y.' 2 0000-0001-8571-080X 'Horie, M.' 3 0000-0003-4682-7698 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Tetrameric nucleoprotein complex of the Borna disease virus 1 nucleoprotein (3D class 1)' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sugita, Y.' 1 0000-0001-6861-4840 primary 'Hirai, Y.' 2 0000-0001-8571-080X primary 'Horie, M.' 3 0000-0003-4682-7698 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Nucleoprotein _entity.formula_weight 43576.832 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'Full-length nucleoprotein of the Borna disease virus 1 strain He/80 with N-terminal hexahistidine tag' # _entity_name_com.entity_id 1 _entity_name_com.name 'N protein,Nucleocapsid protein,p38,p40' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMLEMPPKRRLVDDADAMEDQDLYEPPASLPKLPGKFLQYTVGGSDPHPGIGHEKDIRQNA VALLDQSRRDMFHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFYGEKTTQRDLTELEISSIF SHCCSLLIGVVIGSSSKIKAGAEQIKKRFKTMMAALNRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFES PGKEFMDQIKLVASYAQMTTYTTIKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEEHADLFPFLGAIRHPDAIKLAPR SFPNLASAAFYWSKKENPTMAGYRASTIQPGASVKETQLARYRRREISRGEDGAELSGEISAIMRMIGVTGLN ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMLEMPPKRRLVDDADAMEDQDLYEPPASLPKLPGKFLQYTVGGSDPHPGIGHEKDIRQNA VALLDQSRRDMFHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFYGEKTTQRDLTELEISSIF SHCCSLLIGVVIGSSSKIKAGAEQIKKRFKTMMAALNRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFES PGKEFMDQIKLVASYAQMTTYTTIKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEEHADLFPFLGAIRHPDAIKLAPR SFPNLASAAFYWSKKENPTMAGYRASTIQPGASVKETQLARYRRREISRGEDGAELSGEISAIMRMIGVTGLN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 LEU n 1 23 GLU n 1 24 MET n 1 25 PRO n 1 26 PRO n 1 27 LYS n 1 28 ARG n 1 29 ARG n 1 30 LEU n 1 31 VAL n 1 32 ASP n 1 33 ASP n 1 34 ALA n 1 35 ASP n 1 36 ALA n 1 37 MET n 1 38 GLU n 1 39 ASP n 1 40 GLN n 1 41 ASP n 1 42 LEU n 1 43 TYR n 1 44 GLU n 1 45 PRO n 1 46 PRO n 1 47 ALA n 1 48 SER n 1 49 LEU n 1 50 PRO n 1 51 LYS n 1 52 LEU n 1 53 PRO n 1 54 GLY n 1 55 LYS n 1 56 PHE n 1 57 LEU n 1 58 GLN n 1 59 TYR n 1 60 THR n 1 61 VAL n 1 62 GLY n 1 63 GLY n 1 64 SER n 1 65 ASP n 1 66 PRO n 1 67 HIS n 1 68 PRO n 1 69 GLY n 1 70 ILE n 1 71 GLY n 1 72 HIS n 1 73 GLU n 1 74 LYS n 1 75 ASP n 1 76 ILE n 1 77 ARG n 1 78 GLN n 1 79 ASN n 1 80 ALA n 1 81 VAL n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 ASP n 1 86 GLN n 1 87 SER n 1 88 ARG n 1 89 ARG n 1 90 ASP n 1 91 MET n 1 92 PHE n 1 93 HIS n 1 94 THR n 1 95 VAL n 1 96 THR n 1 97 PRO n 1 98 SER n 1 99 LEU n 1 100 VAL n 1 101 PHE n 1 102 LEU n 1 103 CYS n 1 104 LEU n 1 105 LEU n 1 106 ILE n 1 107 PRO n 1 108 GLY n 1 109 LEU n 1 110 HIS n 1 111 ALA n 1 112 ALA n 1 113 PHE n 1 114 VAL n 1 115 HIS n 1 116 GLY n 1 117 GLY n 1 118 VAL n 1 119 PRO n 1 120 ARG n 1 121 GLU n 1 122 SER n 1 123 TYR n 1 124 LEU n 1 125 SER n 1 126 THR n 1 127 PRO n 1 128 VAL n 1 129 THR n 1 130 ARG n 1 131 GLY n 1 132 GLU n 1 133 GLN n 1 134 THR n 1 135 VAL n 1 136 VAL n 1 137 LYS n 1 138 THR n 1 139 ALA n 1 140 LYS n 1 141 PHE n 1 142 TYR n 1 143 GLY n 1 144 GLU n 1 145 LYS n 1 146 THR n 1 147 THR n 1 148 GLN n 1 149 ARG n 1 150 ASP n 1 151 LEU n 1 152 THR n 1 153 GLU n 1 154 LEU n 1 155 GLU n 1 156 ILE n 1 157 SER n 1 158 SER n 1 159 ILE n 1 160 PHE n 1 161 SER n 1 162 HIS n 1 163 CYS n 1 164 CYS n 1 165 SER n 1 166 LEU n 1 167 LEU n 1 168 ILE n 1 169 GLY n 1 170 VAL n 1 171 VAL n 1 172 ILE n 1 173 GLY n 1 174 SER n 1 175 SER n 1 176 SER n 1 177 LYS n 1 178 ILE n 1 179 LYS n 1 180 ALA n 1 181 GLY n 1 182 ALA n 1 183 GLU n 1 184 GLN n 1 185 ILE n 1 186 LYS n 1 187 LYS n 1 188 ARG n 1 189 PHE n 1 190 LYS n 1 191 THR n 1 192 MET n 1 193 MET n 1 194 ALA n 1 195 ALA n 1 196 LEU n 1 197 ASN n 1 198 ARG n 1 199 PRO n 1 200 SER n 1 201 HIS n 1 202 GLY n 1 203 GLU n 1 204 THR n 1 205 ALA n 1 206 THR n 1 207 LEU n 1 208 LEU n 1 209 GLN n 1 210 MET n 1 211 PHE n 1 212 ASN n 1 213 PRO n 1 214 HIS n 1 215 GLU n 1 216 ALA n 1 217 ILE n 1 218 ASP n 1 219 TRP n 1 220 ILE n 1 221 ASN n 1 222 GLY n 1 223 GLN n 1 224 PRO n 1 225 TRP n 1 226 VAL n 1 227 GLY n 1 228 SER n 1 229 PHE n 1 230 VAL n 1 231 LEU n 1 232 SER n 1 233 LEU n 1 234 LEU n 1 235 THR n 1 236 THR n 1 237 ASP n 1 238 PHE n 1 239 GLU n 1 240 SER n 1 241 PRO n 1 242 GLY n 1 243 LYS n 1 244 GLU n 1 245 PHE n 1 246 MET n 1 247 ASP n 1 248 GLN n 1 249 ILE n 1 250 LYS n 1 251 LEU n 1 252 VAL n 1 253 ALA n 1 254 SER n 1 255 TYR n 1 256 ALA n 1 257 GLN n 1 258 MET n 1 259 THR n 1 260 THR n 1 261 TYR n 1 262 THR n 1 263 THR n 1 264 ILE n 1 265 LYS n 1 266 GLU n 1 267 TYR n 1 268 LEU n 1 269 ALA n 1 270 GLU n 1 271 CYS n 1 272 MET n 1 273 ASP n 1 274 ALA n 1 275 THR n 1 276 LEU n 1 277 THR n 1 278 ILE n 1 279 PRO n 1 280 VAL n 1 281 VAL n 1 282 ALA n 1 283 TYR n 1 284 GLU n 1 285 ILE n 1 286 ARG n 1 287 ASP n 1 288 PHE n 1 289 LEU n 1 290 GLU n 1 291 VAL n 1 292 SER n 1 293 ALA n 1 294 LYS n 1 295 LEU n 1 296 LYS n 1 297 GLU n 1 298 GLU n 1 299 HIS n 1 300 ALA n 1 301 ASP n 1 302 LEU n 1 303 PHE n 1 304 PRO n 1 305 PHE n 1 306 LEU n 1 307 GLY n 1 308 ALA n 1 309 ILE n 1 310 ARG n 1 311 HIS n 1 312 PRO n 1 313 ASP n 1 314 ALA n 1 315 ILE n 1 316 LYS n 1 317 LEU n 1 318 ALA n 1 319 PRO n 1 320 ARG n 1 321 SER n 1 322 PHE n 1 323 PRO n 1 324 ASN n 1 325 LEU n 1 326 ALA n 1 327 SER n 1 328 ALA n 1 329 ALA n 1 330 PHE n 1 331 TYR n 1 332 TRP n 1 333 SER n 1 334 LYS n 1 335 LYS n 1 336 GLU n 1 337 ASN n 1 338 PRO n 1 339 THR n 1 340 MET n 1 341 ALA n 1 342 GLY n 1 343 TYR n 1 344 ARG n 1 345 ALA n 1 346 SER n 1 347 THR n 1 348 ILE n 1 349 GLN n 1 350 PRO n 1 351 GLY n 1 352 ALA n 1 353 SER n 1 354 VAL n 1 355 LYS n 1 356 GLU n 1 357 THR n 1 358 GLN n 1 359 LEU n 1 360 ALA n 1 361 ARG n 1 362 TYR n 1 363 ARG n 1 364 ARG n 1 365 ARG n 1 366 GLU n 1 367 ILE n 1 368 SER n 1 369 ARG n 1 370 GLY n 1 371 GLU n 1 372 ASP n 1 373 GLY n 1 374 ALA n 1 375 GLU n 1 376 LEU n 1 377 SER n 1 378 GLY n 1 379 GLU n 1 380 ILE n 1 381 SER n 1 382 ALA n 1 383 ILE n 1 384 MET n 1 385 ARG n 1 386 MET n 1 387 ILE n 1 388 GLY n 1 389 VAL n 1 390 THR n 1 391 GLY n 1 392 LEU n 1 393 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 393 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain He/80 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Borna disease virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1714621 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -22 ? ? ? A . n A 1 2 GLY 2 -21 ? ? ? A . n A 1 3 SER 3 -20 ? ? ? A . n A 1 4 SER 4 -19 ? ? ? A . n A 1 5 HIS 5 -18 ? ? ? A . n A 1 6 HIS 6 -17 ? ? ? A . n A 1 7 HIS 7 -16 ? ? ? A . n A 1 8 HIS 8 -15 ? ? ? A . n A 1 9 HIS 9 -14 ? ? ? A . n A 1 10 HIS 10 -13 ? ? ? A . n A 1 11 SER 11 -12 ? ? ? A . n A 1 12 SER 12 -11 ? ? ? A . n A 1 13 GLY 13 -10 ? ? ? A . n A 1 14 LEU 14 -9 ? ? ? A . n A 1 15 VAL 15 -8 ? ? ? A . n A 1 16 PRO 16 -7 ? ? ? A . n A 1 17 ARG 17 -6 ? ? ? A . n A 1 18 GLY 18 -5 ? ? ? A . n A 1 19 SER 19 -4 ? ? ? A . n A 1 20 HIS 20 -3 ? ? ? A . n A 1 21 MET 21 -2 ? ? ? A . n A 1 22 LEU 22 -1 ? ? ? A . n A 1 23 GLU 23 0 ? ? ? A . n A 1 24 MET 24 1 ? ? ? A . n A 1 25 PRO 25 2 ? ? ? A . n A 1 26 PRO 26 3 ? ? ? A . n A 1 27 LYS 27 4 ? ? ? A . n A 1 28 ARG 28 5 ? ? ? A . n A 1 29 ARG 29 6 ? ? ? A . n A 1 30 LEU 30 7 ? ? ? A . n A 1 31 VAL 31 8 ? ? ? A . n A 1 32 ASP 32 9 ? ? ? A . n A 1 33 ASP 33 10 ? ? ? A . n A 1 34 ALA 34 11 ? ? ? A . n A 1 35 ASP 35 12 ? ? ? A . n A 1 36 ALA 36 13 ? ? ? A . n A 1 37 MET 37 14 ? ? ? A . n A 1 38 GLU 38 15 ? ? ? A . n A 1 39 ASP 39 16 ? ? ? A . n A 1 40 GLN 40 17 ? ? ? A . n A 1 41 ASP 41 18 ? ? ? A . n A 1 42 LEU 42 19 ? ? ? A . n A 1 43 TYR 43 20 ? ? ? A . n A 1 44 GLU 44 21 ? ? ? A . n A 1 45 PRO 45 22 ? ? ? A . n A 1 46 PRO 46 23 ? ? ? A . n A 1 47 ALA 47 24 24 ALA ALA A . n A 1 48 SER 48 25 25 SER SER A . n A 1 49 LEU 49 26 26 LEU LEU A . n A 1 50 PRO 50 27 27 PRO PRO A . n A 1 51 LYS 51 28 28 LYS LYS A . n A 1 52 LEU 52 29 29 LEU LEU A . n A 1 53 PRO 53 30 30 PRO PRO A . n A 1 54 GLY 54 31 31 GLY GLY A . n A 1 55 LYS 55 32 32 LYS LYS A . n A 1 56 PHE 56 33 33 PHE PHE A . n A 1 57 LEU 57 34 34 LEU LEU A . n A 1 58 GLN 58 35 35 GLN GLN A . n A 1 59 TYR 59 36 36 TYR TYR A . n A 1 60 THR 60 37 37 THR THR A . n A 1 61 VAL 61 38 38 VAL VAL A . n A 1 62 GLY 62 39 39 GLY GLY A . n A 1 63 GLY 63 40 40 GLY GLY A . n A 1 64 SER 64 41 41 SER SER A . n A 1 65 ASP 65 42 42 ASP ASP A . n A 1 66 PRO 66 43 43 PRO PRO A . n A 1 67 HIS 67 44 44 HIS HIS A . n A 1 68 PRO 68 45 45 PRO PRO A . n A 1 69 GLY 69 46 46 GLY GLY A . n A 1 70 ILE 70 47 47 ILE ILE A . n A 1 71 GLY 71 48 48 GLY GLY A . n A 1 72 HIS 72 49 49 HIS HIS A . n A 1 73 GLU 73 50 50 GLU GLU A . n A 1 74 LYS 74 51 51 LYS LYS A . n A 1 75 ASP 75 52 52 ASP ASP A . n A 1 76 ILE 76 53 53 ILE ILE A . n A 1 77 ARG 77 54 54 ARG ARG A . n A 1 78 GLN 78 55 55 GLN GLN A . n A 1 79 ASN 79 56 56 ASN ASN A . n A 1 80 ALA 80 57 57 ALA ALA A . n A 1 81 VAL 81 58 58 VAL VAL A . n A 1 82 ALA 82 59 59 ALA ALA A . n A 1 83 LEU 83 60 60 LEU LEU A . n A 1 84 LEU 84 61 61 LEU LEU A . n A 1 85 ASP 85 62 62 ASP ASP A . n A 1 86 GLN 86 63 63 GLN GLN A . n A 1 87 SER 87 64 64 SER SER A . n A 1 88 ARG 88 65 65 ARG ARG A . n A 1 89 ARG 89 66 66 ARG ARG A . n A 1 90 ASP 90 67 67 ASP ASP A . n A 1 91 MET 91 68 68 MET MET A . n A 1 92 PHE 92 69 69 PHE PHE A . n A 1 93 HIS 93 70 70 HIS HIS A . n A 1 94 THR 94 71 71 THR THR A . n A 1 95 VAL 95 72 72 VAL VAL A . n A 1 96 THR 96 73 73 THR THR A . n A 1 97 PRO 97 74 74 PRO PRO A . n A 1 98 SER 98 75 75 SER SER A . n A 1 99 LEU 99 76 76 LEU LEU A . n A 1 100 VAL 100 77 77 VAL VAL A . n A 1 101 PHE 101 78 78 PHE PHE A . n A 1 102 LEU 102 79 79 LEU LEU A . n A 1 103 CYS 103 80 80 CYS CYS A . n A 1 104 LEU 104 81 81 LEU LEU A . n A 1 105 LEU 105 82 82 LEU LEU A . n A 1 106 ILE 106 83 83 ILE ILE A . n A 1 107 PRO 107 84 84 PRO PRO A . n A 1 108 GLY 108 85 85 GLY GLY A . n A 1 109 LEU 109 86 86 LEU LEU A . n A 1 110 HIS 110 87 87 HIS HIS A . n A 1 111 ALA 111 88 88 ALA ALA A . n A 1 112 ALA 112 89 89 ALA ALA A . n A 1 113 PHE 113 90 90 PHE PHE A . n A 1 114 VAL 114 91 91 VAL VAL A . n A 1 115 HIS 115 92 92 HIS HIS A . n A 1 116 GLY 116 93 93 GLY GLY A . n A 1 117 GLY 117 94 94 GLY GLY A . n A 1 118 VAL 118 95 95 VAL VAL A . n A 1 119 PRO 119 96 96 PRO PRO A . n A 1 120 ARG 120 97 97 ARG ARG A . n A 1 121 GLU 121 98 98 GLU GLU A . n A 1 122 SER 122 99 99 SER SER A . n A 1 123 TYR 123 100 100 TYR TYR A . n A 1 124 LEU 124 101 101 LEU LEU A . n A 1 125 SER 125 102 102 SER SER A . n A 1 126 THR 126 103 103 THR THR A . n A 1 127 PRO 127 104 104 PRO PRO A . n A 1 128 VAL 128 105 105 VAL VAL A . n A 1 129 THR 129 106 106 THR THR A . n A 1 130 ARG 130 107 ? ? ? A . n A 1 131 GLY 131 108 ? ? ? A . n A 1 132 GLU 132 109 ? ? ? A . n A 1 133 GLN 133 110 ? ? ? A . n A 1 134 THR 134 111 111 THR THR A . n A 1 135 VAL 135 112 112 VAL VAL A . n A 1 136 VAL 136 113 113 VAL VAL A . n A 1 137 LYS 137 114 114 LYS LYS A . n A 1 138 THR 138 115 115 THR THR A . n A 1 139 ALA 139 116 116 ALA ALA A . n A 1 140 LYS 140 117 117 LYS LYS A . n A 1 141 PHE 141 118 118 PHE PHE A . n A 1 142 TYR 142 119 119 TYR TYR A . n A 1 143 GLY 143 120 120 GLY GLY A . n A 1 144 GLU 144 121 121 GLU GLU A . n A 1 145 LYS 145 122 122 LYS LYS A . n A 1 146 THR 146 123 123 THR THR A . n A 1 147 THR 147 124 124 THR THR A . n A 1 148 GLN 148 125 125 GLN GLN A . n A 1 149 ARG 149 126 126 ARG ARG A . n A 1 150 ASP 150 127 127 ASP ASP A . n A 1 151 LEU 151 128 128 LEU LEU A . n A 1 152 THR 152 129 129 THR THR A . n A 1 153 GLU 153 130 130 GLU GLU A . n A 1 154 LEU 154 131 131 LEU LEU A . n A 1 155 GLU 155 132 132 GLU GLU A . n A 1 156 ILE 156 133 133 ILE ILE A . n A 1 157 SER 157 134 134 SER SER A . n A 1 158 SER 158 135 135 SER SER A . n A 1 159 ILE 159 136 136 ILE ILE A . n A 1 160 PHE 160 137 137 PHE PHE A . n A 1 161 SER 161 138 138 SER SER A . n A 1 162 HIS 162 139 139 HIS HIS A . n A 1 163 CYS 163 140 140 CYS CYS A . n A 1 164 CYS 164 141 141 CYS CYS A . n A 1 165 SER 165 142 142 SER SER A . n A 1 166 LEU 166 143 143 LEU LEU A . n A 1 167 LEU 167 144 144 LEU LEU A . n A 1 168 ILE 168 145 145 ILE ILE A . n A 1 169 GLY 169 146 146 GLY GLY A . n A 1 170 VAL 170 147 147 VAL VAL A . n A 1 171 VAL 171 148 148 VAL VAL A . n A 1 172 ILE 172 149 149 ILE ILE A . n A 1 173 GLY 173 150 150 GLY GLY A . n A 1 174 SER 174 151 151 SER SER A . n A 1 175 SER 175 152 152 SER SER A . n A 1 176 SER 176 153 153 SER SER A . n A 1 177 LYS 177 154 154 LYS LYS A . n A 1 178 ILE 178 155 155 ILE ILE A . n A 1 179 LYS 179 156 156 LYS LYS A . n A 1 180 ALA 180 157 157 ALA ALA A . n A 1 181 GLY 181 158 158 GLY GLY A . n A 1 182 ALA 182 159 159 ALA ALA A . n A 1 183 GLU 183 160 160 GLU GLU A . n A 1 184 GLN 184 161 161 GLN GLN A . n A 1 185 ILE 185 162 162 ILE ILE A . n A 1 186 LYS 186 163 163 LYS LYS A . n A 1 187 LYS 187 164 164 LYS LYS A . n A 1 188 ARG 188 165 165 ARG ARG A . n A 1 189 PHE 189 166 166 PHE PHE A . n A 1 190 LYS 190 167 167 LYS LYS A . n A 1 191 THR 191 168 168 THR THR A . n A 1 192 MET 192 169 169 MET MET A . n A 1 193 MET 193 170 170 MET MET A . n A 1 194 ALA 194 171 171 ALA ALA A . n A 1 195 ALA 195 172 172 ALA ALA A . n A 1 196 LEU 196 173 173 LEU LEU A . n A 1 197 ASN 197 174 174 ASN ASN A . n A 1 198 ARG 198 175 175 ARG ARG A . n A 1 199 PRO 199 176 176 PRO PRO A . n A 1 200 SER 200 177 177 SER SER A . n A 1 201 HIS 201 178 178 HIS HIS A . n A 1 202 GLY 202 179 179 GLY GLY A . n A 1 203 GLU 203 180 180 GLU GLU A . n A 1 204 THR 204 181 181 THR THR A . n A 1 205 ALA 205 182 182 ALA ALA A . n A 1 206 THR 206 183 183 THR THR A . n A 1 207 LEU 207 184 184 LEU LEU A . n A 1 208 LEU 208 185 185 LEU LEU A . n A 1 209 GLN 209 186 186 GLN GLN A . n A 1 210 MET 210 187 187 MET MET A . n A 1 211 PHE 211 188 188 PHE PHE A . n A 1 212 ASN 212 189 189 ASN ASN A . n A 1 213 PRO 213 190 190 PRO PRO A . n A 1 214 HIS 214 191 191 HIS HIS A . n A 1 215 GLU 215 192 192 GLU GLU A . n A 1 216 ALA 216 193 193 ALA ALA A . n A 1 217 ILE 217 194 194 ILE ILE A . n A 1 218 ASP 218 195 195 ASP ASP A . n A 1 219 TRP 219 196 196 TRP TRP A . n A 1 220 ILE 220 197 197 ILE ILE A . n A 1 221 ASN 221 198 198 ASN ASN A . n A 1 222 GLY 222 199 199 GLY GLY A . n A 1 223 GLN 223 200 200 GLN GLN A . n A 1 224 PRO 224 201 201 PRO PRO A . n A 1 225 TRP 225 202 202 TRP TRP A . n A 1 226 VAL 226 203 203 VAL VAL A . n A 1 227 GLY 227 204 204 GLY GLY A . n A 1 228 SER 228 205 205 SER SER A . n A 1 229 PHE 229 206 206 PHE PHE A . n A 1 230 VAL 230 207 207 VAL VAL A . n A 1 231 LEU 231 208 208 LEU LEU A . n A 1 232 SER 232 209 209 SER SER A . n A 1 233 LEU 233 210 210 LEU LEU A . n A 1 234 LEU 234 211 211 LEU LEU A . n A 1 235 THR 235 212 212 THR THR A . n A 1 236 THR 236 213 213 THR THR A . n A 1 237 ASP 237 214 214 ASP ASP A . n A 1 238 PHE 238 215 215 PHE PHE A . n A 1 239 GLU 239 216 216 GLU GLU A . n A 1 240 SER 240 217 217 SER SER A . n A 1 241 PRO 241 218 218 PRO PRO A . n A 1 242 GLY 242 219 219 GLY GLY A . n A 1 243 LYS 243 220 220 LYS LYS A . n A 1 244 GLU 244 221 221 GLU GLU A . n A 1 245 PHE 245 222 222 PHE PHE A . n A 1 246 MET 246 223 223 MET MET A . n A 1 247 ASP 247 224 224 ASP ASP A . n A 1 248 GLN 248 225 225 GLN GLN A . n A 1 249 ILE 249 226 226 ILE ILE A . n A 1 250 LYS 250 227 227 LYS LYS A . n A 1 251 LEU 251 228 228 LEU LEU A . n A 1 252 VAL 252 229 229 VAL VAL A . n A 1 253 ALA 253 230 230 ALA ALA A . n A 1 254 SER 254 231 231 SER SER A . n A 1 255 TYR 255 232 232 TYR TYR A . n A 1 256 ALA 256 233 233 ALA ALA A . n A 1 257 GLN 257 234 234 GLN GLN A . n A 1 258 MET 258 235 235 MET MET A . n A 1 259 THR 259 236 236 THR THR A . n A 1 260 THR 260 237 237 THR THR A . n A 1 261 TYR 261 238 238 TYR TYR A . n A 1 262 THR 262 239 239 THR THR A . n A 1 263 THR 263 240 240 THR THR A . n A 1 264 ILE 264 241 241 ILE ILE A . n A 1 265 LYS 265 242 242 LYS LYS A . n A 1 266 GLU 266 243 243 GLU GLU A . n A 1 267 TYR 267 244 244 TYR TYR A . n A 1 268 LEU 268 245 245 LEU LEU A . n A 1 269 ALA 269 246 246 ALA ALA A . n A 1 270 GLU 270 247 247 GLU GLU A . n A 1 271 CYS 271 248 248 CYS CYS A . n A 1 272 MET 272 249 249 MET MET A . n A 1 273 ASP 273 250 250 ASP ASP A . n A 1 274 ALA 274 251 251 ALA ALA A . n A 1 275 THR 275 252 252 THR THR A . n A 1 276 LEU 276 253 253 LEU LEU A . n A 1 277 THR 277 254 254 THR THR A . n A 1 278 ILE 278 255 255 ILE ILE A . n A 1 279 PRO 279 256 256 PRO PRO A . n A 1 280 VAL 280 257 257 VAL VAL A . n A 1 281 VAL 281 258 258 VAL VAL A . n A 1 282 ALA 282 259 259 ALA ALA A . n A 1 283 TYR 283 260 260 TYR TYR A . n A 1 284 GLU 284 261 261 GLU GLU A . n A 1 285 ILE 285 262 262 ILE ILE A . n A 1 286 ARG 286 263 263 ARG ARG A . n A 1 287 ASP 287 264 264 ASP ASP A . n A 1 288 PHE 288 265 265 PHE PHE A . n A 1 289 LEU 289 266 266 LEU LEU A . n A 1 290 GLU 290 267 267 GLU GLU A . n A 1 291 VAL 291 268 268 VAL VAL A . n A 1 292 SER 292 269 269 SER SER A . n A 1 293 ALA 293 270 270 ALA ALA A . n A 1 294 LYS 294 271 271 LYS LYS A . n A 1 295 LEU 295 272 272 LEU LEU A . n A 1 296 LYS 296 273 273 LYS LYS A . n A 1 297 GLU 297 274 274 GLU GLU A . n A 1 298 GLU 298 275 275 GLU GLU A . n A 1 299 HIS 299 276 276 HIS HIS A . n A 1 300 ALA 300 277 277 ALA ALA A . n A 1 301 ASP 301 278 278 ASP ASP A . n A 1 302 LEU 302 279 279 LEU LEU A . n A 1 303 PHE 303 280 280 PHE PHE A . n A 1 304 PRO 304 281 281 PRO PRO A . n A 1 305 PHE 305 282 282 PHE PHE A . n A 1 306 LEU 306 283 283 LEU LEU A . n A 1 307 GLY 307 284 284 GLY GLY A . n A 1 308 ALA 308 285 285 ALA ALA A . n A 1 309 ILE 309 286 286 ILE ILE A . n A 1 310 ARG 310 287 287 ARG ARG A . n A 1 311 HIS 311 288 288 HIS HIS A . n A 1 312 PRO 312 289 289 PRO PRO A . n A 1 313 ASP 313 290 290 ASP ASP A . n A 1 314 ALA 314 291 291 ALA ALA A . n A 1 315 ILE 315 292 292 ILE ILE A . n A 1 316 LYS 316 293 293 LYS LYS A . n A 1 317 LEU 317 294 294 LEU LEU A . n A 1 318 ALA 318 295 295 ALA ALA A . n A 1 319 PRO 319 296 296 PRO PRO A . n A 1 320 ARG 320 297 297 ARG ARG A . n A 1 321 SER 321 298 298 SER SER A . n A 1 322 PHE 322 299 299 PHE PHE A . n A 1 323 PRO 323 300 300 PRO PRO A . n A 1 324 ASN 324 301 301 ASN ASN A . n A 1 325 LEU 325 302 302 LEU LEU A . n A 1 326 ALA 326 303 303 ALA ALA A . n A 1 327 SER 327 304 304 SER SER A . n A 1 328 ALA 328 305 305 ALA ALA A . n A 1 329 ALA 329 306 306 ALA ALA A . n A 1 330 PHE 330 307 307 PHE PHE A . n A 1 331 TYR 331 308 308 TYR TYR A . n A 1 332 TRP 332 309 309 TRP TRP A . n A 1 333 SER 333 310 310 SER SER A . n A 1 334 LYS 334 311 311 LYS LYS A . n A 1 335 LYS 335 312 312 LYS LYS A . n A 1 336 GLU 336 313 313 GLU GLU A . n A 1 337 ASN 337 314 314 ASN ASN A . n A 1 338 PRO 338 315 315 PRO PRO A . n A 1 339 THR 339 316 316 THR THR A . n A 1 340 MET 340 317 ? ? ? A . n A 1 341 ALA 341 318 ? ? ? A . n A 1 342 GLY 342 319 ? ? ? A . n A 1 343 TYR 343 320 ? ? ? A . n A 1 344 ARG 344 321 ? ? ? A . n A 1 345 ALA 345 322 ? ? ? A . n A 1 346 SER 346 323 323 SER SER A . n A 1 347 THR 347 324 324 THR THR A . n A 1 348 ILE 348 325 325 ILE ILE A . n A 1 349 GLN 349 326 326 GLN GLN A . n A 1 350 PRO 350 327 327 PRO PRO A . n A 1 351 GLY 351 328 328 GLY GLY A . n A 1 352 ALA 352 329 329 ALA ALA A . n A 1 353 SER 353 330 330 SER SER A . n A 1 354 VAL 354 331 331 VAL VAL A . n A 1 355 LYS 355 332 332 LYS LYS A . n A 1 356 GLU 356 333 333 GLU GLU A . n A 1 357 THR 357 334 334 THR THR A . n A 1 358 GLN 358 335 335 GLN GLN A . n A 1 359 LEU 359 336 336 LEU LEU A . n A 1 360 ALA 360 337 337 ALA ALA A . n A 1 361 ARG 361 338 338 ARG ARG A . n A 1 362 TYR 362 339 339 TYR TYR A . n A 1 363 ARG 363 340 340 ARG ARG A . n A 1 364 ARG 364 341 341 ARG ARG A . n A 1 365 ARG 365 342 342 ARG ARG A . n A 1 366 GLU 366 343 343 GLU GLU A . n A 1 367 ILE 367 344 344 ILE ILE A . n A 1 368 SER 368 345 345 SER SER A . n A 1 369 ARG 369 346 346 ARG ARG A . n A 1 370 GLY 370 347 347 GLY GLY A . n A 1 371 GLU 371 348 348 GLU GLU A . n A 1 372 ASP 372 349 349 ASP ASP A . n A 1 373 GLY 373 350 350 GLY GLY A . n A 1 374 ALA 374 351 351 ALA ALA A . n A 1 375 GLU 375 352 352 GLU GLU A . n A 1 376 LEU 376 353 353 LEU LEU A . n A 1 377 SER 377 354 354 SER SER A . n A 1 378 GLY 378 355 355 GLY GLY A . n A 1 379 GLU 379 356 356 GLU GLU A . n A 1 380 ILE 380 357 357 ILE ILE A . n A 1 381 SER 381 358 358 SER SER A . n A 1 382 ALA 382 359 359 ALA ALA A . n A 1 383 ILE 383 360 360 ILE ILE A . n A 1 384 MET 384 361 361 MET MET A . n A 1 385 ARG 385 362 362 ARG ARG A . n A 1 386 MET 386 363 363 MET MET A . n A 1 387 ILE 387 364 364 ILE ILE A . n A 1 388 GLY 388 365 365 GLY GLY A . n A 1 389 VAL 389 366 366 VAL VAL A . n A 1 390 THR 390 367 367 THR THR A . n A 1 391 GLY 391 368 368 GLY GLY A . n A 1 392 LEU 392 369 369 LEU LEU A . n A 1 393 ASN 393 370 370 ASN ASN A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9JZI _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9JZI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9JZI _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 114.263 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9JZI _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.09 _refine.ls_d_res_low 3.09 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 86934 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.26865 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.26865 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'PARAMETERS FOR MASK CACLULATION' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.157 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 10.966 _refine.overall_SU_ML 0.186 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.number_atoms_solvent ? _refine_hist.number_atoms_total 2616 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein ? _refine_hist.pdbx_number_atoms_nucleic_acid ? _refine_hist.pdbx_number_atoms_ligand ? _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.009 0.012 2673 ? r_bond_refined_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.000 0.016 2572 ? r_bond_other_d ? ? ? 'ELECTRON MICROSCOPY' ? 1.595 1.825 3619 ? r_angle_refined_deg ? ? ? 'ELECTRON MICROSCOPY' ? 0.692 1.749 5943 ? r_angle_other_deg ? ? ? 'ELECTRON MICROSCOPY' ? 4.792 5.000 334 ? r_dihedral_angle_1_deg ? ? ? 'ELECTRON MICROSCOPY' ? 9.866 5.000 16 ? r_dihedral_angle_2_deg ? ? ? 'ELECTRON MICROSCOPY' ? 12.120 10.000 464 ? r_dihedral_angle_3_deg ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_dihedral_angle_4_deg ? ? ? 'ELECTRON MICROSCOPY' ? 0.086 0.200 413 ? r_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.008 0.020 3077 ? r_gen_planes_refined ? ? ? 'ELECTRON MICROSCOPY' ? 0.004 0.020 585 ? r_gen_planes_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_other ? ? ? 'ELECTRON MICROSCOPY' ? 15.708 10.362 1345 ? r_mcbond_it ? ? ? 'ELECTRON MICROSCOPY' ? 15.708 10.361 1345 ? r_mcbond_other ? ? ? 'ELECTRON MICROSCOPY' ? 23.314 18.631 1676 ? r_mcangle_it ? ? ? 'ELECTRON MICROSCOPY' ? 23.310 18.641 1677 ? r_mcangle_other ? ? ? 'ELECTRON MICROSCOPY' ? 19.271 12.118 1328 ? r_scbond_it ? ? ? 'ELECTRON MICROSCOPY' ? 19.264 12.129 1329 ? r_scbond_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_scangle_it ? ? ? 'ELECTRON MICROSCOPY' ? 29.645 21.292 1944 ? r_scangle_other ? ? ? 'ELECTRON MICROSCOPY' ? 39.614 235.15 40680 ? r_long_range_B_refined ? ? ? 'ELECTRON MICROSCOPY' ? 39.614 235.15 40681 ? r_long_range_B_other ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_rigid_bond_restr ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_free ? ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_bonded ? ? ? # _refine_ls_shell.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_ls_shell.d_res_high 3.150 _refine_ls_shell.d_res_low 3.232 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 0 _refine_ls_shell.number_reflns_R_work 6487 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 1.229 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.000 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? 0.000000 -1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 121.81710 0.00000 0.00000 3 generate ? -1.000000 0.000000 0.000000 0.000000 -1.000000 0.000000 0.000000 0.000000 1.000000 121.81710 121.81710 0.00000 4 generate ? 0.000000 1.000000 0.000000 -1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.00000 121.81710 0.00000 # _struct.entry_id 9JZI _struct.title 'Tetrameric complex (3D class 1) of the Borna disease virus 1 nucleoprotein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9JZI _struct_keywords.text 'nucleoprotein, complex, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NCAP_BDV1 _struct_ref.pdbx_db_accession P0C796 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPPKRRLVDDADAMEDQDLYEPPASLPKLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRDMFHTVTPSLVFLC LLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFYGEKTTQRDLTELEISSIFSHCCSLLIGVVIGSSSKIKAGAE QIKKRFKTMMAALNRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEFMDQIKLVASYAQMTTYTT IKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEEHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKENPTMAGY RASTIQPGASVKETQLARYRRREISRGEDGAELSGEISAIMRMIGVTGLN ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9JZI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 393 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C796 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 370 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 370 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9JZI MET A 1 ? UNP P0C796 ? ? 'initiating methionine' -22 1 1 9JZI GLY A 2 ? UNP P0C796 ? ? 'expression tag' -21 2 1 9JZI SER A 3 ? UNP P0C796 ? ? 'expression tag' -20 3 1 9JZI SER A 4 ? UNP P0C796 ? ? 'expression tag' -19 4 1 9JZI HIS A 5 ? UNP P0C796 ? ? 'expression tag' -18 5 1 9JZI HIS A 6 ? UNP P0C796 ? ? 'expression tag' -17 6 1 9JZI HIS A 7 ? UNP P0C796 ? ? 'expression tag' -16 7 1 9JZI HIS A 8 ? UNP P0C796 ? ? 'expression tag' -15 8 1 9JZI HIS A 9 ? UNP P0C796 ? ? 'expression tag' -14 9 1 9JZI HIS A 10 ? UNP P0C796 ? ? 'expression tag' -13 10 1 9JZI SER A 11 ? UNP P0C796 ? ? 'expression tag' -12 11 1 9JZI SER A 12 ? UNP P0C796 ? ? 'expression tag' -11 12 1 9JZI GLY A 13 ? UNP P0C796 ? ? 'expression tag' -10 13 1 9JZI LEU A 14 ? UNP P0C796 ? ? 'expression tag' -9 14 1 9JZI VAL A 15 ? UNP P0C796 ? ? 'expression tag' -8 15 1 9JZI PRO A 16 ? UNP P0C796 ? ? 'expression tag' -7 16 1 9JZI ARG A 17 ? UNP P0C796 ? ? 'expression tag' -6 17 1 9JZI GLY A 18 ? UNP P0C796 ? ? 'expression tag' -5 18 1 9JZI SER A 19 ? UNP P0C796 ? ? 'expression tag' -4 19 1 9JZI HIS A 20 ? UNP P0C796 ? ? 'expression tag' -3 20 1 9JZI MET A 21 ? UNP P0C796 ? ? 'expression tag' -2 21 1 9JZI LEU A 22 ? UNP P0C796 ? ? 'expression tag' -1 22 1 9JZI GLU A 23 ? UNP P0C796 ? ? 'expression tag' 0 23 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4 A 1 5 A 1 6 A 1 7 A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? 0.0 -1.0 0.0 121.81710 1.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 3 'point symmetry operation' ? ? -1.0 0.0 0.0 121.81710 0.0 -1.0 0.0 121.81710 0.0 0.0 1.0 0.0 4 'point symmetry operation' ? ? 0.0 1.0 0.0 0.0 -1.0 0.0 0.0 121.81710 0.0 0.0 1.0 0.0 5 'point symmetry operation' ? ? 0.000000 -1.000000 0.000000 121.81710 1.000000 0.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 6 'point symmetry operation' ? ? -1.000000 0.000000 0.000000 121.81710 0.000000 -1.000000 0.000000 121.81710 0.000000 0.000000 1.000000 0.00000 7 'point symmetry operation' ? ? 0.000000 1.000000 0.000000 0.00000 -1.000000 0.000000 0.000000 121.81710 0.000000 0.000000 1.000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 72 ? LYS A 74 ? HIS A 49 LYS A 51 5 ? 3 HELX_P HELX_P2 AA2 ASP A 75 ? LEU A 83 ? ASP A 52 LEU A 60 1 ? 9 HELX_P HELX_P3 AA3 ASP A 85 ? ASP A 90 ? ASP A 62 ASP A 67 1 ? 6 HELX_P HELX_P4 AA4 VAL A 95 ? ILE A 106 ? VAL A 72 ILE A 83 1 ? 12 HELX_P HELX_P5 AA5 GLY A 108 ? GLY A 117 ? GLY A 85 GLY A 94 1 ? 10 HELX_P HELX_P6 AA6 THR A 152 ? GLY A 173 ? THR A 129 GLY A 150 1 ? 22 HELX_P HELX_P7 AA7 SER A 175 ? GLY A 181 ? SER A 152 GLY A 158 1 ? 7 HELX_P HELX_P8 AA8 ALA A 182 ? LEU A 196 ? ALA A 159 LEU A 173 1 ? 15 HELX_P HELX_P9 AA9 SER A 200 ? ALA A 205 ? SER A 177 ALA A 182 1 ? 6 HELX_P HELX_P10 AB1 PRO A 213 ? GLN A 223 ? PRO A 190 GLN A 200 1 ? 11 HELX_P HELX_P11 AB2 TRP A 225 ? THR A 236 ? TRP A 202 THR A 213 1 ? 12 HELX_P HELX_P12 AB3 PRO A 241 ? ALA A 253 ? PRO A 218 ALA A 230 1 ? 13 HELX_P HELX_P13 AB4 MET A 258 ? CYS A 271 ? MET A 235 CYS A 248 1 ? 14 HELX_P HELX_P14 AB5 ASP A 273 ? THR A 277 ? ASP A 250 THR A 254 5 ? 5 HELX_P HELX_P15 AB6 ILE A 278 ? HIS A 299 ? ILE A 255 HIS A 276 1 ? 22 HELX_P HELX_P16 AB7 LEU A 302 ? LEU A 306 ? LEU A 279 LEU A 283 5 ? 5 HELX_P HELX_P17 AB8 HIS A 311 ? ALA A 318 ? HIS A 288 ALA A 295 5 ? 8 HELX_P HELX_P18 AB9 PHE A 322 ? ASN A 337 ? PHE A 299 ASN A 314 1 ? 16 HELX_P HELX_P19 AC1 LYS A 355 ? ARG A 365 ? LYS A 332 ARG A 342 1 ? 11 HELX_P HELX_P20 AC2 SER A 377 ? MET A 386 ? SER A 354 MET A 363 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 240 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 217 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 241 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 218 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.07 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 122 ? VAL A 128 ? SER A 99 VAL A 105 AA1 2 VAL A 135 ? THR A 138 ? VAL A 112 THR A 115 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 122 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 99 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id THR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 138 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id THR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 115 # _pdbx_entry_details.entry_id 9JZI _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 278 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 71.99 _pdbx_validate_torsion.psi -2.02 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 66 ? ? 0.128 'SIDE CHAIN' 2 1 ARG A 342 ? ? 0.100 'SIDE CHAIN' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9JZI _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 1n93 _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 1n93 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9JZI _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.09 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 154548 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Nucleoprotein complex of the Borna disease virus 1' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9JZI _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 0.056 _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 50.0 _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9JZI _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9JZI _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9JZI _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -22 ? A MET 1 2 1 Y 1 A GLY -21 ? A GLY 2 3 1 Y 1 A SER -20 ? A SER 3 4 1 Y 1 A SER -19 ? A SER 4 5 1 Y 1 A HIS -18 ? A HIS 5 6 1 Y 1 A HIS -17 ? A HIS 6 7 1 Y 1 A HIS -16 ? A HIS 7 8 1 Y 1 A HIS -15 ? A HIS 8 9 1 Y 1 A HIS -14 ? A HIS 9 10 1 Y 1 A HIS -13 ? A HIS 10 11 1 Y 1 A SER -12 ? A SER 11 12 1 Y 1 A SER -11 ? A SER 12 13 1 Y 1 A GLY -10 ? A GLY 13 14 1 Y 1 A LEU -9 ? A LEU 14 15 1 Y 1 A VAL -8 ? A VAL 15 16 1 Y 1 A PRO -7 ? A PRO 16 17 1 Y 1 A ARG -6 ? A ARG 17 18 1 Y 1 A GLY -5 ? A GLY 18 19 1 Y 1 A SER -4 ? A SER 19 20 1 Y 1 A HIS -3 ? A HIS 20 21 1 Y 1 A MET -2 ? A MET 21 22 1 Y 1 A LEU -1 ? A LEU 22 23 1 Y 1 A GLU 0 ? A GLU 23 24 1 Y 1 A MET 1 ? A MET 24 25 1 Y 1 A PRO 2 ? A PRO 25 26 1 Y 1 A PRO 3 ? A PRO 26 27 1 Y 1 A LYS 4 ? A LYS 27 28 1 Y 1 A ARG 5 ? A ARG 28 29 1 Y 1 A ARG 6 ? A ARG 29 30 1 Y 1 A LEU 7 ? A LEU 30 31 1 Y 1 A VAL 8 ? A VAL 31 32 1 Y 1 A ASP 9 ? A ASP 32 33 1 Y 1 A ASP 10 ? A ASP 33 34 1 Y 1 A ALA 11 ? A ALA 34 35 1 Y 1 A ASP 12 ? A ASP 35 36 1 Y 1 A ALA 13 ? A ALA 36 37 1 Y 1 A MET 14 ? A MET 37 38 1 Y 1 A GLU 15 ? A GLU 38 39 1 Y 1 A ASP 16 ? A ASP 39 40 1 Y 1 A GLN 17 ? A GLN 40 41 1 Y 1 A ASP 18 ? A ASP 41 42 1 Y 1 A LEU 19 ? A LEU 42 43 1 Y 1 A TYR 20 ? A TYR 43 44 1 Y 1 A GLU 21 ? A GLU 44 45 1 Y 1 A PRO 22 ? A PRO 45 46 1 Y 1 A PRO 23 ? A PRO 46 47 1 Y 1 A ARG 107 ? A ARG 130 48 1 Y 1 A GLY 108 ? A GLY 131 49 1 Y 1 A GLU 109 ? A GLU 132 50 1 Y 1 A GLN 110 ? A GLN 133 51 1 Y 1 A MET 317 ? A MET 340 52 1 Y 1 A ALA 318 ? A ALA 341 53 1 Y 1 A GLY 319 ? A GLY 342 54 1 Y 1 A TYR 320 ? A TYR 343 55 1 Y 1 A ARG 321 ? A ARG 344 56 1 Y 1 A ALA 322 ? A ALA 345 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-10-15 _em_admin.deposition_site PDBJ _em_admin.entry_id 9JZI _em_admin.last_update 2026-03-11 _em_admin.map_release_date 2026-03-11 _em_admin.title 'Tetrameric complex (3D class 1) of the Borna disease virus 1 nucleoprotein' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 1714621 _em_entity_assembly_naturalsource.organism 'Borna disease virus 1' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 10212934 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? Topaz ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 SerialEM ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' ? ? 'MODEL FITTING' ? 8 ? 1 ? Coot ? ? OTHER ? 9 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 10 ? 1 ? Servalcat ? ? 'INITIAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC ? ? 'FINAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC ? ? CLASSIFICATION ? 13 1 ? ? cryoSPARC ? ? RECONSTRUCTION ? 14 1 ? ? cryoSPARC ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Science and Technology' Japan 21460759 1 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan 24K02284 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1n93 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9JZI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #