data_9K6N # _entry.id 9K6N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9K6N pdb_00009k6n 10.2210/pdb9k6n/pdb WWPDB D_1300052694 ? ? EMDB EMD-62130 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-10-22 ? 2 'EM metadata' 1 0 2025-10-22 ? 3 FSC 1 0 2025-10-22 ? 4 'Half map' 1 0 2025-10-22 1 5 'Half map' 1 0 2025-10-22 2 6 Image 1 0 2025-10-22 ? 7 'Primary map' 1 0 2025-10-22 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9K6N _pdbx_database_status.recvd_initial_deposition_date 2024-10-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Pentraxin Domain of PTX3 Tetramer' _pdbx_database_related.db_id EMD-62130 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email zhanghw@sustech.edu.cn _pdbx_contact_author.name_first Huawei _pdbx_contact_author.name_last Zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5625-5809 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guo, H.H.' 1 0009-0002-6304-5348 'Zhang, H.W.' 2 0000-0002-5625-5809 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Pentraxin Domain of PTX3 Tetramer' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, H.H.' 1 0009-0002-6304-5348 primary 'Zhang, H.W.' 2 0000-0002-5625-5809 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pentraxin-related protein PTX3' 22793.846 4 ? ? ? ? 2 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Pentaxin-related protein PTX3,Tumor necrosis factor alpha-induced protein 5,TNF alpha-induced protein 5,Tumor necrosis factor-inducible gene 14 protein,TSG-14 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SWLPAGCETAILFPMRSKKIFGSVHPVRPMRLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQSIVFVVGGE ENKLVAEAMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTVEMATGHIVPEGGILQIGQEKNGCCVGGGFDETLAFSGR LTGFNIWDSVLSNEEIRETGGAESCHIRGNIVGWGVTEIQPHGGAQYVS ; _entity_poly.pdbx_seq_one_letter_code_can ;SWLPAGCETAILFPMRSKKIFGSVHPVRPMRLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQSIVFVVGGE ENKLVAEAMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTVEMATGHIVPEGGILQIGQEKNGCCVGGGFDETLAFSGR LTGFNIWDSVLSNEEIRETGGAESCHIRGNIVGWGVTEIQPHGGAQYVS ; _entity_poly.pdbx_strand_id A,B,G,H _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TRP n 1 3 LEU n 1 4 PRO n 1 5 ALA n 1 6 GLY n 1 7 CYS n 1 8 GLU n 1 9 THR n 1 10 ALA n 1 11 ILE n 1 12 LEU n 1 13 PHE n 1 14 PRO n 1 15 MET n 1 16 ARG n 1 17 SER n 1 18 LYS n 1 19 LYS n 1 20 ILE n 1 21 PHE n 1 22 GLY n 1 23 SER n 1 24 VAL n 1 25 HIS n 1 26 PRO n 1 27 VAL n 1 28 ARG n 1 29 PRO n 1 30 MET n 1 31 ARG n 1 32 LEU n 1 33 GLU n 1 34 SER n 1 35 PHE n 1 36 SER n 1 37 ALA n 1 38 CYS n 1 39 ILE n 1 40 TRP n 1 41 VAL n 1 42 LYS n 1 43 ALA n 1 44 THR n 1 45 ASP n 1 46 VAL n 1 47 LEU n 1 48 ASN n 1 49 LYS n 1 50 THR n 1 51 ILE n 1 52 LEU n 1 53 PHE n 1 54 SER n 1 55 TYR n 1 56 GLY n 1 57 THR n 1 58 LYS n 1 59 ARG n 1 60 ASN n 1 61 PRO n 1 62 TYR n 1 63 GLU n 1 64 ILE n 1 65 GLN n 1 66 LEU n 1 67 TYR n 1 68 LEU n 1 69 SER n 1 70 TYR n 1 71 GLN n 1 72 SER n 1 73 ILE n 1 74 VAL n 1 75 PHE n 1 76 VAL n 1 77 VAL n 1 78 GLY n 1 79 GLY n 1 80 GLU n 1 81 GLU n 1 82 ASN n 1 83 LYS n 1 84 LEU n 1 85 VAL n 1 86 ALA n 1 87 GLU n 1 88 ALA n 1 89 MET n 1 90 VAL n 1 91 SER n 1 92 LEU n 1 93 GLY n 1 94 ARG n 1 95 TRP n 1 96 THR n 1 97 HIS n 1 98 LEU n 1 99 CYS n 1 100 GLY n 1 101 THR n 1 102 TRP n 1 103 ASN n 1 104 SER n 1 105 GLU n 1 106 GLU n 1 107 GLY n 1 108 LEU n 1 109 THR n 1 110 SER n 1 111 LEU n 1 112 TRP n 1 113 VAL n 1 114 ASN n 1 115 GLY n 1 116 GLU n 1 117 LEU n 1 118 ALA n 1 119 ALA n 1 120 THR n 1 121 THR n 1 122 VAL n 1 123 GLU n 1 124 MET n 1 125 ALA n 1 126 THR n 1 127 GLY n 1 128 HIS n 1 129 ILE n 1 130 VAL n 1 131 PRO n 1 132 GLU n 1 133 GLY n 1 134 GLY n 1 135 ILE n 1 136 LEU n 1 137 GLN n 1 138 ILE n 1 139 GLY n 1 140 GLN n 1 141 GLU n 1 142 LYS n 1 143 ASN n 1 144 GLY n 1 145 CYS n 1 146 CYS n 1 147 VAL n 1 148 GLY n 1 149 GLY n 1 150 GLY n 1 151 PHE n 1 152 ASP n 1 153 GLU n 1 154 THR n 1 155 LEU n 1 156 ALA n 1 157 PHE n 1 158 SER n 1 159 GLY n 1 160 ARG n 1 161 LEU n 1 162 THR n 1 163 GLY n 1 164 PHE n 1 165 ASN n 1 166 ILE n 1 167 TRP n 1 168 ASP n 1 169 SER n 1 170 VAL n 1 171 LEU n 1 172 SER n 1 173 ASN n 1 174 GLU n 1 175 GLU n 1 176 ILE n 1 177 ARG n 1 178 GLU n 1 179 THR n 1 180 GLY n 1 181 GLY n 1 182 ALA n 1 183 GLU n 1 184 SER n 1 185 CYS n 1 186 HIS n 1 187 ILE n 1 188 ARG n 1 189 GLY n 1 190 ASN n 1 191 ILE n 1 192 VAL n 1 193 GLY n 1 194 TRP n 1 195 GLY n 1 196 VAL n 1 197 THR n 1 198 GLU n 1 199 ILE n 1 200 GLN n 1 201 PRO n 1 202 HIS n 1 203 GLY n 1 204 GLY n 1 205 ALA n 1 206 GLN n 1 207 TYR n 1 208 VAL n 1 209 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 209 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PTX3, TNFAIP5, TSG14' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name Mammalia _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 40674 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell 293F _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 173 ? ? ? A . n A 1 2 TRP 2 174 ? ? ? A . n A 1 3 LEU 3 175 ? ? ? A . n A 1 4 PRO 4 176 ? ? ? A . n A 1 5 ALA 5 177 ? ? ? A . n A 1 6 GLY 6 178 178 GLY GLY A . n A 1 7 CYS 7 179 179 CYS CYS A . n A 1 8 GLU 8 180 180 GLU GLU A . n A 1 9 THR 9 181 181 THR THR A . n A 1 10 ALA 10 182 182 ALA ALA A . n A 1 11 ILE 11 183 183 ILE ILE A . n A 1 12 LEU 12 184 184 LEU LEU A . n A 1 13 PHE 13 185 185 PHE PHE A . n A 1 14 PRO 14 186 186 PRO PRO A . n A 1 15 MET 15 187 187 MET MET A . n A 1 16 ARG 16 188 188 ARG ARG A . n A 1 17 SER 17 189 189 SER SER A . n A 1 18 LYS 18 190 190 LYS LYS A . n A 1 19 LYS 19 191 191 LYS LYS A . n A 1 20 ILE 20 192 192 ILE ILE A . n A 1 21 PHE 21 193 193 PHE PHE A . n A 1 22 GLY 22 194 194 GLY GLY A . n A 1 23 SER 23 195 195 SER SER A . n A 1 24 VAL 24 196 196 VAL VAL A . n A 1 25 HIS 25 197 197 HIS HIS A . n A 1 26 PRO 26 198 198 PRO PRO A . n A 1 27 VAL 27 199 199 VAL VAL A . n A 1 28 ARG 28 200 200 ARG ARG A . n A 1 29 PRO 29 201 201 PRO PRO A . n A 1 30 MET 30 202 202 MET MET A . n A 1 31 ARG 31 203 203 ARG ARG A . n A 1 32 LEU 32 204 204 LEU LEU A . n A 1 33 GLU 33 205 205 GLU GLU A . n A 1 34 SER 34 206 206 SER SER A . n A 1 35 PHE 35 207 207 PHE PHE A . n A 1 36 SER 36 208 208 SER SER A . n A 1 37 ALA 37 209 209 ALA ALA A . n A 1 38 CYS 38 210 210 CYS CYS A . n A 1 39 ILE 39 211 211 ILE ILE A . n A 1 40 TRP 40 212 212 TRP TRP A . n A 1 41 VAL 41 213 213 VAL VAL A . n A 1 42 LYS 42 214 214 LYS LYS A . n A 1 43 ALA 43 215 215 ALA ALA A . n A 1 44 THR 44 216 216 THR THR A . n A 1 45 ASP 45 217 217 ASP ASP A . n A 1 46 VAL 46 218 218 VAL VAL A . n A 1 47 LEU 47 219 219 LEU LEU A . n A 1 48 ASN 48 220 220 ASN ASN A . n A 1 49 LYS 49 221 221 LYS LYS A . n A 1 50 THR 50 222 222 THR THR A . n A 1 51 ILE 51 223 223 ILE ILE A . n A 1 52 LEU 52 224 224 LEU LEU A . n A 1 53 PHE 53 225 225 PHE PHE A . n A 1 54 SER 54 226 226 SER SER A . n A 1 55 TYR 55 227 227 TYR TYR A . n A 1 56 GLY 56 228 228 GLY GLY A . n A 1 57 THR 57 229 229 THR THR A . n A 1 58 LYS 58 230 230 LYS LYS A . n A 1 59 ARG 59 231 231 ARG ARG A . n A 1 60 ASN 60 232 232 ASN ASN A . n A 1 61 PRO 61 233 233 PRO PRO A . n A 1 62 TYR 62 234 234 TYR TYR A . n A 1 63 GLU 63 235 235 GLU GLU A . n A 1 64 ILE 64 236 236 ILE ILE A . n A 1 65 GLN 65 237 237 GLN GLN A . n A 1 66 LEU 66 238 238 LEU LEU A . n A 1 67 TYR 67 239 239 TYR TYR A . n A 1 68 LEU 68 240 240 LEU LEU A . n A 1 69 SER 69 241 241 SER SER A . n A 1 70 TYR 70 242 242 TYR TYR A . n A 1 71 GLN 71 243 243 GLN GLN A . n A 1 72 SER 72 244 244 SER SER A . n A 1 73 ILE 73 245 245 ILE ILE A . n A 1 74 VAL 74 246 246 VAL VAL A . n A 1 75 PHE 75 247 247 PHE PHE A . n A 1 76 VAL 76 248 248 VAL VAL A . n A 1 77 VAL 77 249 249 VAL VAL A . n A 1 78 GLY 78 250 250 GLY GLY A . n A 1 79 GLY 79 251 251 GLY GLY A . n A 1 80 GLU 80 252 252 GLU GLU A . n A 1 81 GLU 81 253 253 GLU GLU A . n A 1 82 ASN 82 254 254 ASN ASN A . n A 1 83 LYS 83 255 255 LYS LYS A . n A 1 84 LEU 84 256 256 LEU LEU A . n A 1 85 VAL 85 257 257 VAL VAL A . n A 1 86 ALA 86 258 258 ALA ALA A . n A 1 87 GLU 87 259 259 GLU GLU A . n A 1 88 ALA 88 260 260 ALA ALA A . n A 1 89 MET 89 261 261 MET MET A . n A 1 90 VAL 90 262 262 VAL VAL A . n A 1 91 SER 91 263 263 SER SER A . n A 1 92 LEU 92 264 264 LEU LEU A . n A 1 93 GLY 93 265 265 GLY GLY A . n A 1 94 ARG 94 266 266 ARG ARG A . n A 1 95 TRP 95 267 267 TRP TRP A . n A 1 96 THR 96 268 268 THR THR A . n A 1 97 HIS 97 269 269 HIS HIS A . n A 1 98 LEU 98 270 270 LEU LEU A . n A 1 99 CYS 99 271 271 CYS CYS A . n A 1 100 GLY 100 272 272 GLY GLY A . n A 1 101 THR 101 273 273 THR THR A . n A 1 102 TRP 102 274 274 TRP TRP A . n A 1 103 ASN 103 275 275 ASN ASN A . n A 1 104 SER 104 276 276 SER SER A . n A 1 105 GLU 105 277 277 GLU GLU A . n A 1 106 GLU 106 278 278 GLU GLU A . n A 1 107 GLY 107 279 279 GLY GLY A . n A 1 108 LEU 108 280 280 LEU LEU A . n A 1 109 THR 109 281 281 THR THR A . n A 1 110 SER 110 282 282 SER SER A . n A 1 111 LEU 111 283 283 LEU LEU A . n A 1 112 TRP 112 284 284 TRP TRP A . n A 1 113 VAL 113 285 285 VAL VAL A . n A 1 114 ASN 114 286 286 ASN ASN A . n A 1 115 GLY 115 287 287 GLY GLY A . n A 1 116 GLU 116 288 288 GLU GLU A . n A 1 117 LEU 117 289 289 LEU LEU A . n A 1 118 ALA 118 290 290 ALA ALA A . n A 1 119 ALA 119 291 291 ALA ALA A . n A 1 120 THR 120 292 292 THR THR A . n A 1 121 THR 121 293 293 THR THR A . n A 1 122 VAL 122 294 294 VAL VAL A . n A 1 123 GLU 123 295 295 GLU GLU A . n A 1 124 MET 124 296 296 MET MET A . n A 1 125 ALA 125 297 297 ALA ALA A . n A 1 126 THR 126 298 298 THR THR A . n A 1 127 GLY 127 299 299 GLY GLY A . n A 1 128 HIS 128 300 300 HIS HIS A . n A 1 129 ILE 129 301 301 ILE ILE A . n A 1 130 VAL 130 302 302 VAL VAL A . n A 1 131 PRO 131 303 303 PRO PRO A . n A 1 132 GLU 132 304 304 GLU GLU A . n A 1 133 GLY 133 305 305 GLY GLY A . n A 1 134 GLY 134 306 306 GLY GLY A . n A 1 135 ILE 135 307 307 ILE ILE A . n A 1 136 LEU 136 308 308 LEU LEU A . n A 1 137 GLN 137 309 309 GLN GLN A . n A 1 138 ILE 138 310 310 ILE ILE A . n A 1 139 GLY 139 311 311 GLY GLY A . n A 1 140 GLN 140 312 312 GLN GLN A . n A 1 141 GLU 141 313 313 GLU GLU A . n A 1 142 LYS 142 314 314 LYS LYS A . n A 1 143 ASN 143 315 315 ASN ASN A . n A 1 144 GLY 144 316 316 GLY GLY A . n A 1 145 CYS 145 317 317 CYS CYS A . n A 1 146 CYS 146 318 318 CYS CYS A . n A 1 147 VAL 147 319 319 VAL VAL A . n A 1 148 GLY 148 320 320 GLY GLY A . n A 1 149 GLY 149 321 321 GLY GLY A . n A 1 150 GLY 150 322 322 GLY GLY A . n A 1 151 PHE 151 323 323 PHE PHE A . n A 1 152 ASP 152 324 324 ASP ASP A . n A 1 153 GLU 153 325 325 GLU GLU A . n A 1 154 THR 154 326 326 THR THR A . n A 1 155 LEU 155 327 327 LEU LEU A . n A 1 156 ALA 156 328 328 ALA ALA A . n A 1 157 PHE 157 329 329 PHE PHE A . n A 1 158 SER 158 330 330 SER SER A . n A 1 159 GLY 159 331 331 GLY GLY A . n A 1 160 ARG 160 332 332 ARG ARG A . n A 1 161 LEU 161 333 333 LEU LEU A . n A 1 162 THR 162 334 334 THR THR A . n A 1 163 GLY 163 335 335 GLY GLY A . n A 1 164 PHE 164 336 336 PHE PHE A . n A 1 165 ASN 165 337 337 ASN ASN A . n A 1 166 ILE 166 338 338 ILE ILE A . n A 1 167 TRP 167 339 339 TRP TRP A . n A 1 168 ASP 168 340 340 ASP ASP A . n A 1 169 SER 169 341 341 SER SER A . n A 1 170 VAL 170 342 342 VAL VAL A . n A 1 171 LEU 171 343 343 LEU LEU A . n A 1 172 SER 172 344 344 SER SER A . n A 1 173 ASN 173 345 345 ASN ASN A . n A 1 174 GLU 174 346 346 GLU GLU A . n A 1 175 GLU 175 347 347 GLU GLU A . n A 1 176 ILE 176 348 348 ILE ILE A . n A 1 177 ARG 177 349 349 ARG ARG A . n A 1 178 GLU 178 350 350 GLU GLU A . n A 1 179 THR 179 351 351 THR THR A . n A 1 180 GLY 180 352 352 GLY GLY A . n A 1 181 GLY 181 353 353 GLY GLY A . n A 1 182 ALA 182 354 354 ALA ALA A . n A 1 183 GLU 183 355 355 GLU GLU A . n A 1 184 SER 184 356 356 SER SER A . n A 1 185 CYS 185 357 357 CYS CYS A . n A 1 186 HIS 186 358 358 HIS HIS A . n A 1 187 ILE 187 359 359 ILE ILE A . n A 1 188 ARG 188 360 360 ARG ARG A . n A 1 189 GLY 189 361 361 GLY GLY A . n A 1 190 ASN 190 362 362 ASN ASN A . n A 1 191 ILE 191 363 363 ILE ILE A . n A 1 192 VAL 192 364 364 VAL VAL A . n A 1 193 GLY 193 365 365 GLY GLY A . n A 1 194 TRP 194 366 366 TRP TRP A . n A 1 195 GLY 195 367 367 GLY GLY A . n A 1 196 VAL 196 368 368 VAL VAL A . n A 1 197 THR 197 369 369 THR THR A . n A 1 198 GLU 198 370 370 GLU GLU A . n A 1 199 ILE 199 371 371 ILE ILE A . n A 1 200 GLN 200 372 372 GLN GLN A . n A 1 201 PRO 201 373 373 PRO PRO A . n A 1 202 HIS 202 374 374 HIS HIS A . n A 1 203 GLY 203 375 375 GLY GLY A . n A 1 204 GLY 204 376 376 GLY GLY A . n A 1 205 ALA 205 377 377 ALA ALA A . n A 1 206 GLN 206 378 378 GLN GLN A . n A 1 207 TYR 207 379 379 TYR TYR A . n A 1 208 VAL 208 380 380 VAL VAL A . n A 1 209 SER 209 381 381 SER SER A . n B 1 1 SER 1 173 173 SER SER B . n B 1 2 TRP 2 174 174 TRP TRP B . n B 1 3 LEU 3 175 175 LEU LEU B . n B 1 4 PRO 4 176 176 PRO PRO B . n B 1 5 ALA 5 177 177 ALA ALA B . n B 1 6 GLY 6 178 178 GLY GLY B . n B 1 7 CYS 7 179 179 CYS CYS B . n B 1 8 GLU 8 180 180 GLU GLU B . n B 1 9 THR 9 181 181 THR THR B . n B 1 10 ALA 10 182 182 ALA ALA B . n B 1 11 ILE 11 183 183 ILE ILE B . n B 1 12 LEU 12 184 184 LEU LEU B . n B 1 13 PHE 13 185 185 PHE PHE B . n B 1 14 PRO 14 186 186 PRO PRO B . n B 1 15 MET 15 187 187 MET MET B . n B 1 16 ARG 16 188 188 ARG ARG B . n B 1 17 SER 17 189 189 SER SER B . n B 1 18 LYS 18 190 190 LYS LYS B . n B 1 19 LYS 19 191 191 LYS LYS B . n B 1 20 ILE 20 192 192 ILE ILE B . n B 1 21 PHE 21 193 193 PHE PHE B . n B 1 22 GLY 22 194 194 GLY GLY B . n B 1 23 SER 23 195 195 SER SER B . n B 1 24 VAL 24 196 196 VAL VAL B . n B 1 25 HIS 25 197 197 HIS HIS B . n B 1 26 PRO 26 198 198 PRO PRO B . n B 1 27 VAL 27 199 199 VAL VAL B . n B 1 28 ARG 28 200 200 ARG ARG B . n B 1 29 PRO 29 201 201 PRO PRO B . n B 1 30 MET 30 202 202 MET MET B . n B 1 31 ARG 31 203 203 ARG ARG B . n B 1 32 LEU 32 204 204 LEU LEU B . n B 1 33 GLU 33 205 205 GLU GLU B . n B 1 34 SER 34 206 206 SER SER B . n B 1 35 PHE 35 207 207 PHE PHE B . n B 1 36 SER 36 208 208 SER SER B . n B 1 37 ALA 37 209 209 ALA ALA B . n B 1 38 CYS 38 210 210 CYS CYS B . n B 1 39 ILE 39 211 211 ILE ILE B . n B 1 40 TRP 40 212 212 TRP TRP B . n B 1 41 VAL 41 213 213 VAL VAL B . n B 1 42 LYS 42 214 214 LYS LYS B . n B 1 43 ALA 43 215 215 ALA ALA B . n B 1 44 THR 44 216 216 THR THR B . n B 1 45 ASP 45 217 217 ASP ASP B . n B 1 46 VAL 46 218 218 VAL VAL B . n B 1 47 LEU 47 219 219 LEU LEU B . n B 1 48 ASN 48 220 220 ASN ASN B . n B 1 49 LYS 49 221 221 LYS LYS B . n B 1 50 THR 50 222 222 THR THR B . n B 1 51 ILE 51 223 223 ILE ILE B . n B 1 52 LEU 52 224 224 LEU LEU B . n B 1 53 PHE 53 225 225 PHE PHE B . n B 1 54 SER 54 226 226 SER SER B . n B 1 55 TYR 55 227 227 TYR TYR B . n B 1 56 GLY 56 228 228 GLY GLY B . n B 1 57 THR 57 229 229 THR THR B . n B 1 58 LYS 58 230 230 LYS LYS B . n B 1 59 ARG 59 231 231 ARG ARG B . n B 1 60 ASN 60 232 232 ASN ASN B . n B 1 61 PRO 61 233 233 PRO PRO B . n B 1 62 TYR 62 234 234 TYR TYR B . n B 1 63 GLU 63 235 235 GLU GLU B . n B 1 64 ILE 64 236 236 ILE ILE B . n B 1 65 GLN 65 237 237 GLN GLN B . n B 1 66 LEU 66 238 238 LEU LEU B . n B 1 67 TYR 67 239 239 TYR TYR B . n B 1 68 LEU 68 240 240 LEU LEU B . n B 1 69 SER 69 241 241 SER SER B . n B 1 70 TYR 70 242 242 TYR TYR B . n B 1 71 GLN 71 243 243 GLN GLN B . n B 1 72 SER 72 244 244 SER SER B . n B 1 73 ILE 73 245 245 ILE ILE B . n B 1 74 VAL 74 246 246 VAL VAL B . n B 1 75 PHE 75 247 247 PHE PHE B . n B 1 76 VAL 76 248 248 VAL VAL B . n B 1 77 VAL 77 249 249 VAL VAL B . n B 1 78 GLY 78 250 250 GLY GLY B . n B 1 79 GLY 79 251 251 GLY GLY B . n B 1 80 GLU 80 252 252 GLU GLU B . n B 1 81 GLU 81 253 253 GLU GLU B . n B 1 82 ASN 82 254 254 ASN ASN B . n B 1 83 LYS 83 255 255 LYS LYS B . n B 1 84 LEU 84 256 256 LEU LEU B . n B 1 85 VAL 85 257 257 VAL VAL B . n B 1 86 ALA 86 258 258 ALA ALA B . n B 1 87 GLU 87 259 259 GLU GLU B . n B 1 88 ALA 88 260 260 ALA ALA B . n B 1 89 MET 89 261 261 MET MET B . n B 1 90 VAL 90 262 262 VAL VAL B . n B 1 91 SER 91 263 263 SER SER B . n B 1 92 LEU 92 264 264 LEU LEU B . n B 1 93 GLY 93 265 265 GLY GLY B . n B 1 94 ARG 94 266 266 ARG ARG B . n B 1 95 TRP 95 267 267 TRP TRP B . n B 1 96 THR 96 268 268 THR THR B . n B 1 97 HIS 97 269 269 HIS HIS B . n B 1 98 LEU 98 270 270 LEU LEU B . n B 1 99 CYS 99 271 271 CYS CYS B . n B 1 100 GLY 100 272 272 GLY GLY B . n B 1 101 THR 101 273 273 THR THR B . n B 1 102 TRP 102 274 274 TRP TRP B . n B 1 103 ASN 103 275 275 ASN ASN B . n B 1 104 SER 104 276 276 SER SER B . n B 1 105 GLU 105 277 277 GLU GLU B . n B 1 106 GLU 106 278 278 GLU GLU B . n B 1 107 GLY 107 279 279 GLY GLY B . n B 1 108 LEU 108 280 280 LEU LEU B . n B 1 109 THR 109 281 281 THR THR B . n B 1 110 SER 110 282 282 SER SER B . n B 1 111 LEU 111 283 283 LEU LEU B . n B 1 112 TRP 112 284 284 TRP TRP B . n B 1 113 VAL 113 285 285 VAL VAL B . n B 1 114 ASN 114 286 286 ASN ASN B . n B 1 115 GLY 115 287 287 GLY GLY B . n B 1 116 GLU 116 288 288 GLU GLU B . n B 1 117 LEU 117 289 289 LEU LEU B . n B 1 118 ALA 118 290 290 ALA ALA B . n B 1 119 ALA 119 291 291 ALA ALA B . n B 1 120 THR 120 292 292 THR THR B . n B 1 121 THR 121 293 293 THR THR B . n B 1 122 VAL 122 294 294 VAL VAL B . n B 1 123 GLU 123 295 295 GLU GLU B . n B 1 124 MET 124 296 296 MET MET B . n B 1 125 ALA 125 297 297 ALA ALA B . n B 1 126 THR 126 298 298 THR THR B . n B 1 127 GLY 127 299 299 GLY GLY B . n B 1 128 HIS 128 300 300 HIS HIS B . n B 1 129 ILE 129 301 301 ILE ILE B . n B 1 130 VAL 130 302 302 VAL VAL B . n B 1 131 PRO 131 303 303 PRO PRO B . n B 1 132 GLU 132 304 304 GLU GLU B . n B 1 133 GLY 133 305 305 GLY GLY B . n B 1 134 GLY 134 306 306 GLY GLY B . n B 1 135 ILE 135 307 307 ILE ILE B . n B 1 136 LEU 136 308 308 LEU LEU B . n B 1 137 GLN 137 309 309 GLN GLN B . n B 1 138 ILE 138 310 310 ILE ILE B . n B 1 139 GLY 139 311 311 GLY GLY B . n B 1 140 GLN 140 312 312 GLN GLN B . n B 1 141 GLU 141 313 313 GLU GLU B . n B 1 142 LYS 142 314 314 LYS LYS B . n B 1 143 ASN 143 315 315 ASN ASN B . n B 1 144 GLY 144 316 316 GLY GLY B . n B 1 145 CYS 145 317 317 CYS CYS B . n B 1 146 CYS 146 318 318 CYS CYS B . n B 1 147 VAL 147 319 319 VAL VAL B . n B 1 148 GLY 148 320 320 GLY GLY B . n B 1 149 GLY 149 321 321 GLY GLY B . n B 1 150 GLY 150 322 322 GLY GLY B . n B 1 151 PHE 151 323 323 PHE PHE B . n B 1 152 ASP 152 324 324 ASP ASP B . n B 1 153 GLU 153 325 325 GLU GLU B . n B 1 154 THR 154 326 326 THR THR B . n B 1 155 LEU 155 327 327 LEU LEU B . n B 1 156 ALA 156 328 328 ALA ALA B . n B 1 157 PHE 157 329 329 PHE PHE B . n B 1 158 SER 158 330 330 SER SER B . n B 1 159 GLY 159 331 331 GLY GLY B . n B 1 160 ARG 160 332 332 ARG ARG B . n B 1 161 LEU 161 333 333 LEU LEU B . n B 1 162 THR 162 334 334 THR THR B . n B 1 163 GLY 163 335 335 GLY GLY B . n B 1 164 PHE 164 336 336 PHE PHE B . n B 1 165 ASN 165 337 337 ASN ASN B . n B 1 166 ILE 166 338 338 ILE ILE B . n B 1 167 TRP 167 339 339 TRP TRP B . n B 1 168 ASP 168 340 340 ASP ASP B . n B 1 169 SER 169 341 341 SER SER B . n B 1 170 VAL 170 342 342 VAL VAL B . n B 1 171 LEU 171 343 343 LEU LEU B . n B 1 172 SER 172 344 344 SER SER B . n B 1 173 ASN 173 345 345 ASN ASN B . n B 1 174 GLU 174 346 346 GLU GLU B . n B 1 175 GLU 175 347 347 GLU GLU B . n B 1 176 ILE 176 348 348 ILE ILE B . n B 1 177 ARG 177 349 349 ARG ARG B . n B 1 178 GLU 178 350 350 GLU GLU B . n B 1 179 THR 179 351 351 THR THR B . n B 1 180 GLY 180 352 352 GLY GLY B . n B 1 181 GLY 181 353 353 GLY GLY B . n B 1 182 ALA 182 354 354 ALA ALA B . n B 1 183 GLU 183 355 355 GLU GLU B . n B 1 184 SER 184 356 356 SER SER B . n B 1 185 CYS 185 357 357 CYS CYS B . n B 1 186 HIS 186 358 358 HIS HIS B . n B 1 187 ILE 187 359 359 ILE ILE B . n B 1 188 ARG 188 360 360 ARG ARG B . n B 1 189 GLY 189 361 361 GLY GLY B . n B 1 190 ASN 190 362 362 ASN ASN B . n B 1 191 ILE 191 363 363 ILE ILE B . n B 1 192 VAL 192 364 364 VAL VAL B . n B 1 193 GLY 193 365 365 GLY GLY B . n B 1 194 TRP 194 366 366 TRP TRP B . n B 1 195 GLY 195 367 367 GLY GLY B . n B 1 196 VAL 196 368 368 VAL VAL B . n B 1 197 THR 197 369 369 THR THR B . n B 1 198 GLU 198 370 370 GLU GLU B . n B 1 199 ILE 199 371 371 ILE ILE B . n B 1 200 GLN 200 372 372 GLN GLN B . n B 1 201 PRO 201 373 373 PRO PRO B . n B 1 202 HIS 202 374 374 HIS HIS B . n B 1 203 GLY 203 375 375 GLY GLY B . n B 1 204 GLY 204 376 376 GLY GLY B . n B 1 205 ALA 205 377 377 ALA ALA B . n B 1 206 GLN 206 378 378 GLN GLN B . n B 1 207 TYR 207 379 379 TYR TYR B . n B 1 208 VAL 208 380 380 VAL VAL B . n B 1 209 SER 209 381 381 SER SER B . n C 1 1 SER 1 173 ? ? ? G . n C 1 2 TRP 2 174 ? ? ? G . n C 1 3 LEU 3 175 ? ? ? G . n C 1 4 PRO 4 176 ? ? ? G . n C 1 5 ALA 5 177 ? ? ? G . n C 1 6 GLY 6 178 178 GLY GLY G . n C 1 7 CYS 7 179 179 CYS CYS G . n C 1 8 GLU 8 180 180 GLU GLU G . n C 1 9 THR 9 181 181 THR THR G . n C 1 10 ALA 10 182 182 ALA ALA G . n C 1 11 ILE 11 183 183 ILE ILE G . n C 1 12 LEU 12 184 184 LEU LEU G . n C 1 13 PHE 13 185 185 PHE PHE G . n C 1 14 PRO 14 186 186 PRO PRO G . n C 1 15 MET 15 187 187 MET MET G . n C 1 16 ARG 16 188 188 ARG ARG G . n C 1 17 SER 17 189 189 SER SER G . n C 1 18 LYS 18 190 190 LYS LYS G . n C 1 19 LYS 19 191 191 LYS LYS G . n C 1 20 ILE 20 192 192 ILE ILE G . n C 1 21 PHE 21 193 193 PHE PHE G . n C 1 22 GLY 22 194 194 GLY GLY G . n C 1 23 SER 23 195 195 SER SER G . n C 1 24 VAL 24 196 196 VAL VAL G . n C 1 25 HIS 25 197 197 HIS HIS G . n C 1 26 PRO 26 198 198 PRO PRO G . n C 1 27 VAL 27 199 199 VAL VAL G . n C 1 28 ARG 28 200 200 ARG ARG G . n C 1 29 PRO 29 201 201 PRO PRO G . n C 1 30 MET 30 202 202 MET MET G . n C 1 31 ARG 31 203 203 ARG ARG G . n C 1 32 LEU 32 204 204 LEU LEU G . n C 1 33 GLU 33 205 205 GLU GLU G . n C 1 34 SER 34 206 206 SER SER G . n C 1 35 PHE 35 207 207 PHE PHE G . n C 1 36 SER 36 208 208 SER SER G . n C 1 37 ALA 37 209 209 ALA ALA G . n C 1 38 CYS 38 210 210 CYS CYS G . n C 1 39 ILE 39 211 211 ILE ILE G . n C 1 40 TRP 40 212 212 TRP TRP G . n C 1 41 VAL 41 213 213 VAL VAL G . n C 1 42 LYS 42 214 214 LYS LYS G . n C 1 43 ALA 43 215 215 ALA ALA G . n C 1 44 THR 44 216 216 THR THR G . n C 1 45 ASP 45 217 217 ASP ASP G . n C 1 46 VAL 46 218 218 VAL VAL G . n C 1 47 LEU 47 219 219 LEU LEU G . n C 1 48 ASN 48 220 220 ASN ASN G . n C 1 49 LYS 49 221 221 LYS LYS G . n C 1 50 THR 50 222 222 THR THR G . n C 1 51 ILE 51 223 223 ILE ILE G . n C 1 52 LEU 52 224 224 LEU LEU G . n C 1 53 PHE 53 225 225 PHE PHE G . n C 1 54 SER 54 226 226 SER SER G . n C 1 55 TYR 55 227 227 TYR TYR G . n C 1 56 GLY 56 228 228 GLY GLY G . n C 1 57 THR 57 229 229 THR THR G . n C 1 58 LYS 58 230 230 LYS LYS G . n C 1 59 ARG 59 231 231 ARG ARG G . n C 1 60 ASN 60 232 232 ASN ASN G . n C 1 61 PRO 61 233 233 PRO PRO G . n C 1 62 TYR 62 234 234 TYR TYR G . n C 1 63 GLU 63 235 235 GLU GLU G . n C 1 64 ILE 64 236 236 ILE ILE G . n C 1 65 GLN 65 237 237 GLN GLN G . n C 1 66 LEU 66 238 238 LEU LEU G . n C 1 67 TYR 67 239 239 TYR TYR G . n C 1 68 LEU 68 240 240 LEU LEU G . n C 1 69 SER 69 241 241 SER SER G . n C 1 70 TYR 70 242 242 TYR TYR G . n C 1 71 GLN 71 243 243 GLN GLN G . n C 1 72 SER 72 244 244 SER SER G . n C 1 73 ILE 73 245 245 ILE ILE G . n C 1 74 VAL 74 246 246 VAL VAL G . n C 1 75 PHE 75 247 247 PHE PHE G . n C 1 76 VAL 76 248 248 VAL VAL G . n C 1 77 VAL 77 249 249 VAL VAL G . n C 1 78 GLY 78 250 250 GLY GLY G . n C 1 79 GLY 79 251 251 GLY GLY G . n C 1 80 GLU 80 252 252 GLU GLU G . n C 1 81 GLU 81 253 253 GLU GLU G . n C 1 82 ASN 82 254 254 ASN ASN G . n C 1 83 LYS 83 255 255 LYS LYS G . n C 1 84 LEU 84 256 256 LEU LEU G . n C 1 85 VAL 85 257 257 VAL VAL G . n C 1 86 ALA 86 258 258 ALA ALA G . n C 1 87 GLU 87 259 259 GLU GLU G . n C 1 88 ALA 88 260 260 ALA ALA G . n C 1 89 MET 89 261 261 MET MET G . n C 1 90 VAL 90 262 262 VAL VAL G . n C 1 91 SER 91 263 263 SER SER G . n C 1 92 LEU 92 264 264 LEU LEU G . n C 1 93 GLY 93 265 265 GLY GLY G . n C 1 94 ARG 94 266 266 ARG ARG G . n C 1 95 TRP 95 267 267 TRP TRP G . n C 1 96 THR 96 268 268 THR THR G . n C 1 97 HIS 97 269 269 HIS HIS G . n C 1 98 LEU 98 270 270 LEU LEU G . n C 1 99 CYS 99 271 271 CYS CYS G . n C 1 100 GLY 100 272 272 GLY GLY G . n C 1 101 THR 101 273 273 THR THR G . n C 1 102 TRP 102 274 274 TRP TRP G . n C 1 103 ASN 103 275 275 ASN ASN G . n C 1 104 SER 104 276 276 SER SER G . n C 1 105 GLU 105 277 277 GLU GLU G . n C 1 106 GLU 106 278 278 GLU GLU G . n C 1 107 GLY 107 279 279 GLY GLY G . n C 1 108 LEU 108 280 280 LEU LEU G . n C 1 109 THR 109 281 281 THR THR G . n C 1 110 SER 110 282 282 SER SER G . n C 1 111 LEU 111 283 283 LEU LEU G . n C 1 112 TRP 112 284 284 TRP TRP G . n C 1 113 VAL 113 285 285 VAL VAL G . n C 1 114 ASN 114 286 286 ASN ASN G . n C 1 115 GLY 115 287 287 GLY GLY G . n C 1 116 GLU 116 288 288 GLU GLU G . n C 1 117 LEU 117 289 289 LEU LEU G . n C 1 118 ALA 118 290 290 ALA ALA G . n C 1 119 ALA 119 291 291 ALA ALA G . n C 1 120 THR 120 292 292 THR THR G . n C 1 121 THR 121 293 293 THR THR G . n C 1 122 VAL 122 294 294 VAL VAL G . n C 1 123 GLU 123 295 295 GLU GLU G . n C 1 124 MET 124 296 296 MET MET G . n C 1 125 ALA 125 297 297 ALA ALA G . n C 1 126 THR 126 298 298 THR THR G . n C 1 127 GLY 127 299 299 GLY GLY G . n C 1 128 HIS 128 300 300 HIS HIS G . n C 1 129 ILE 129 301 301 ILE ILE G . n C 1 130 VAL 130 302 302 VAL VAL G . n C 1 131 PRO 131 303 303 PRO PRO G . n C 1 132 GLU 132 304 304 GLU GLU G . n C 1 133 GLY 133 305 305 GLY GLY G . n C 1 134 GLY 134 306 306 GLY GLY G . n C 1 135 ILE 135 307 307 ILE ILE G . n C 1 136 LEU 136 308 308 LEU LEU G . n C 1 137 GLN 137 309 309 GLN GLN G . n C 1 138 ILE 138 310 310 ILE ILE G . n C 1 139 GLY 139 311 311 GLY GLY G . n C 1 140 GLN 140 312 312 GLN GLN G . n C 1 141 GLU 141 313 313 GLU GLU G . n C 1 142 LYS 142 314 314 LYS LYS G . n C 1 143 ASN 143 315 315 ASN ASN G . n C 1 144 GLY 144 316 316 GLY GLY G . n C 1 145 CYS 145 317 317 CYS CYS G . n C 1 146 CYS 146 318 318 CYS CYS G . n C 1 147 VAL 147 319 319 VAL VAL G . n C 1 148 GLY 148 320 320 GLY GLY G . n C 1 149 GLY 149 321 321 GLY GLY G . n C 1 150 GLY 150 322 322 GLY GLY G . n C 1 151 PHE 151 323 323 PHE PHE G . n C 1 152 ASP 152 324 324 ASP ASP G . n C 1 153 GLU 153 325 325 GLU GLU G . n C 1 154 THR 154 326 326 THR THR G . n C 1 155 LEU 155 327 327 LEU LEU G . n C 1 156 ALA 156 328 328 ALA ALA G . n C 1 157 PHE 157 329 329 PHE PHE G . n C 1 158 SER 158 330 330 SER SER G . n C 1 159 GLY 159 331 331 GLY GLY G . n C 1 160 ARG 160 332 332 ARG ARG G . n C 1 161 LEU 161 333 333 LEU LEU G . n C 1 162 THR 162 334 334 THR THR G . n C 1 163 GLY 163 335 335 GLY GLY G . n C 1 164 PHE 164 336 336 PHE PHE G . n C 1 165 ASN 165 337 337 ASN ASN G . n C 1 166 ILE 166 338 338 ILE ILE G . n C 1 167 TRP 167 339 339 TRP TRP G . n C 1 168 ASP 168 340 340 ASP ASP G . n C 1 169 SER 169 341 341 SER SER G . n C 1 170 VAL 170 342 342 VAL VAL G . n C 1 171 LEU 171 343 343 LEU LEU G . n C 1 172 SER 172 344 344 SER SER G . n C 1 173 ASN 173 345 345 ASN ASN G . n C 1 174 GLU 174 346 346 GLU GLU G . n C 1 175 GLU 175 347 347 GLU GLU G . n C 1 176 ILE 176 348 348 ILE ILE G . n C 1 177 ARG 177 349 349 ARG ARG G . n C 1 178 GLU 178 350 350 GLU GLU G . n C 1 179 THR 179 351 351 THR THR G . n C 1 180 GLY 180 352 352 GLY GLY G . n C 1 181 GLY 181 353 353 GLY GLY G . n C 1 182 ALA 182 354 354 ALA ALA G . n C 1 183 GLU 183 355 355 GLU GLU G . n C 1 184 SER 184 356 356 SER SER G . n C 1 185 CYS 185 357 357 CYS CYS G . n C 1 186 HIS 186 358 358 HIS HIS G . n C 1 187 ILE 187 359 359 ILE ILE G . n C 1 188 ARG 188 360 360 ARG ARG G . n C 1 189 GLY 189 361 361 GLY GLY G . n C 1 190 ASN 190 362 362 ASN ASN G . n C 1 191 ILE 191 363 363 ILE ILE G . n C 1 192 VAL 192 364 364 VAL VAL G . n C 1 193 GLY 193 365 365 GLY GLY G . n C 1 194 TRP 194 366 366 TRP TRP G . n C 1 195 GLY 195 367 367 GLY GLY G . n C 1 196 VAL 196 368 368 VAL VAL G . n C 1 197 THR 197 369 369 THR THR G . n C 1 198 GLU 198 370 370 GLU GLU G . n C 1 199 ILE 199 371 371 ILE ILE G . n C 1 200 GLN 200 372 372 GLN GLN G . n C 1 201 PRO 201 373 373 PRO PRO G . n C 1 202 HIS 202 374 374 HIS HIS G . n C 1 203 GLY 203 375 375 GLY GLY G . n C 1 204 GLY 204 376 376 GLY GLY G . n C 1 205 ALA 205 377 377 ALA ALA G . n C 1 206 GLN 206 378 378 GLN GLN G . n C 1 207 TYR 207 379 379 TYR TYR G . n C 1 208 VAL 208 380 380 VAL VAL G . n C 1 209 SER 209 381 381 SER SER G . n D 1 1 SER 1 173 173 SER SER H . n D 1 2 TRP 2 174 174 TRP TRP H . n D 1 3 LEU 3 175 175 LEU LEU H . n D 1 4 PRO 4 176 176 PRO PRO H . n D 1 5 ALA 5 177 177 ALA ALA H . n D 1 6 GLY 6 178 178 GLY GLY H . n D 1 7 CYS 7 179 179 CYS CYS H . n D 1 8 GLU 8 180 180 GLU GLU H . n D 1 9 THR 9 181 181 THR THR H . n D 1 10 ALA 10 182 182 ALA ALA H . n D 1 11 ILE 11 183 183 ILE ILE H . n D 1 12 LEU 12 184 184 LEU LEU H . n D 1 13 PHE 13 185 185 PHE PHE H . n D 1 14 PRO 14 186 186 PRO PRO H . n D 1 15 MET 15 187 187 MET MET H . n D 1 16 ARG 16 188 188 ARG ARG H . n D 1 17 SER 17 189 189 SER SER H . n D 1 18 LYS 18 190 190 LYS LYS H . n D 1 19 LYS 19 191 191 LYS LYS H . n D 1 20 ILE 20 192 192 ILE ILE H . n D 1 21 PHE 21 193 193 PHE PHE H . n D 1 22 GLY 22 194 194 GLY GLY H . n D 1 23 SER 23 195 195 SER SER H . n D 1 24 VAL 24 196 196 VAL VAL H . n D 1 25 HIS 25 197 197 HIS HIS H . n D 1 26 PRO 26 198 198 PRO PRO H . n D 1 27 VAL 27 199 199 VAL VAL H . n D 1 28 ARG 28 200 200 ARG ARG H . n D 1 29 PRO 29 201 201 PRO PRO H . n D 1 30 MET 30 202 202 MET MET H . n D 1 31 ARG 31 203 203 ARG ARG H . n D 1 32 LEU 32 204 204 LEU LEU H . n D 1 33 GLU 33 205 205 GLU GLU H . n D 1 34 SER 34 206 206 SER SER H . n D 1 35 PHE 35 207 207 PHE PHE H . n D 1 36 SER 36 208 208 SER SER H . n D 1 37 ALA 37 209 209 ALA ALA H . n D 1 38 CYS 38 210 210 CYS CYS H . n D 1 39 ILE 39 211 211 ILE ILE H . n D 1 40 TRP 40 212 212 TRP TRP H . n D 1 41 VAL 41 213 213 VAL VAL H . n D 1 42 LYS 42 214 214 LYS LYS H . n D 1 43 ALA 43 215 215 ALA ALA H . n D 1 44 THR 44 216 216 THR THR H . n D 1 45 ASP 45 217 217 ASP ASP H . n D 1 46 VAL 46 218 218 VAL VAL H . n D 1 47 LEU 47 219 219 LEU LEU H . n D 1 48 ASN 48 220 220 ASN ASN H . n D 1 49 LYS 49 221 221 LYS LYS H . n D 1 50 THR 50 222 222 THR THR H . n D 1 51 ILE 51 223 223 ILE ILE H . n D 1 52 LEU 52 224 224 LEU LEU H . n D 1 53 PHE 53 225 225 PHE PHE H . n D 1 54 SER 54 226 226 SER SER H . n D 1 55 TYR 55 227 227 TYR TYR H . n D 1 56 GLY 56 228 228 GLY GLY H . n D 1 57 THR 57 229 229 THR THR H . n D 1 58 LYS 58 230 230 LYS LYS H . n D 1 59 ARG 59 231 231 ARG ARG H . n D 1 60 ASN 60 232 232 ASN ASN H . n D 1 61 PRO 61 233 233 PRO PRO H . n D 1 62 TYR 62 234 234 TYR TYR H . n D 1 63 GLU 63 235 235 GLU GLU H . n D 1 64 ILE 64 236 236 ILE ILE H . n D 1 65 GLN 65 237 237 GLN GLN H . n D 1 66 LEU 66 238 238 LEU LEU H . n D 1 67 TYR 67 239 239 TYR TYR H . n D 1 68 LEU 68 240 240 LEU LEU H . n D 1 69 SER 69 241 241 SER SER H . n D 1 70 TYR 70 242 242 TYR TYR H . n D 1 71 GLN 71 243 243 GLN GLN H . n D 1 72 SER 72 244 244 SER SER H . n D 1 73 ILE 73 245 245 ILE ILE H . n D 1 74 VAL 74 246 246 VAL VAL H . n D 1 75 PHE 75 247 247 PHE PHE H . n D 1 76 VAL 76 248 248 VAL VAL H . n D 1 77 VAL 77 249 249 VAL VAL H . n D 1 78 GLY 78 250 250 GLY GLY H . n D 1 79 GLY 79 251 251 GLY GLY H . n D 1 80 GLU 80 252 252 GLU GLU H . n D 1 81 GLU 81 253 253 GLU GLU H . n D 1 82 ASN 82 254 254 ASN ASN H . n D 1 83 LYS 83 255 255 LYS LYS H . n D 1 84 LEU 84 256 256 LEU LEU H . n D 1 85 VAL 85 257 257 VAL VAL H . n D 1 86 ALA 86 258 258 ALA ALA H . n D 1 87 GLU 87 259 259 GLU GLU H . n D 1 88 ALA 88 260 260 ALA ALA H . n D 1 89 MET 89 261 261 MET MET H . n D 1 90 VAL 90 262 262 VAL VAL H . n D 1 91 SER 91 263 263 SER SER H . n D 1 92 LEU 92 264 264 LEU LEU H . n D 1 93 GLY 93 265 265 GLY GLY H . n D 1 94 ARG 94 266 266 ARG ARG H . n D 1 95 TRP 95 267 267 TRP TRP H . n D 1 96 THR 96 268 268 THR THR H . n D 1 97 HIS 97 269 269 HIS HIS H . n D 1 98 LEU 98 270 270 LEU LEU H . n D 1 99 CYS 99 271 271 CYS CYS H . n D 1 100 GLY 100 272 272 GLY GLY H . n D 1 101 THR 101 273 273 THR THR H . n D 1 102 TRP 102 274 274 TRP TRP H . n D 1 103 ASN 103 275 275 ASN ASN H . n D 1 104 SER 104 276 276 SER SER H . n D 1 105 GLU 105 277 277 GLU GLU H . n D 1 106 GLU 106 278 278 GLU GLU H . n D 1 107 GLY 107 279 279 GLY GLY H . n D 1 108 LEU 108 280 280 LEU LEU H . n D 1 109 THR 109 281 281 THR THR H . n D 1 110 SER 110 282 282 SER SER H . n D 1 111 LEU 111 283 283 LEU LEU H . n D 1 112 TRP 112 284 284 TRP TRP H . n D 1 113 VAL 113 285 285 VAL VAL H . n D 1 114 ASN 114 286 286 ASN ASN H . n D 1 115 GLY 115 287 287 GLY GLY H . n D 1 116 GLU 116 288 288 GLU GLU H . n D 1 117 LEU 117 289 289 LEU LEU H . n D 1 118 ALA 118 290 290 ALA ALA H . n D 1 119 ALA 119 291 291 ALA ALA H . n D 1 120 THR 120 292 292 THR THR H . n D 1 121 THR 121 293 293 THR THR H . n D 1 122 VAL 122 294 294 VAL VAL H . n D 1 123 GLU 123 295 295 GLU GLU H . n D 1 124 MET 124 296 296 MET MET H . n D 1 125 ALA 125 297 297 ALA ALA H . n D 1 126 THR 126 298 298 THR THR H . n D 1 127 GLY 127 299 299 GLY GLY H . n D 1 128 HIS 128 300 300 HIS HIS H . n D 1 129 ILE 129 301 301 ILE ILE H . n D 1 130 VAL 130 302 302 VAL VAL H . n D 1 131 PRO 131 303 303 PRO PRO H . n D 1 132 GLU 132 304 304 GLU GLU H . n D 1 133 GLY 133 305 305 GLY GLY H . n D 1 134 GLY 134 306 306 GLY GLY H . n D 1 135 ILE 135 307 307 ILE ILE H . n D 1 136 LEU 136 308 308 LEU LEU H . n D 1 137 GLN 137 309 309 GLN GLN H . n D 1 138 ILE 138 310 310 ILE ILE H . n D 1 139 GLY 139 311 311 GLY GLY H . n D 1 140 GLN 140 312 312 GLN GLN H . n D 1 141 GLU 141 313 313 GLU GLU H . n D 1 142 LYS 142 314 314 LYS LYS H . n D 1 143 ASN 143 315 315 ASN ASN H . n D 1 144 GLY 144 316 316 GLY GLY H . n D 1 145 CYS 145 317 317 CYS CYS H . n D 1 146 CYS 146 318 318 CYS CYS H . n D 1 147 VAL 147 319 319 VAL VAL H . n D 1 148 GLY 148 320 320 GLY GLY H . n D 1 149 GLY 149 321 321 GLY GLY H . n D 1 150 GLY 150 322 322 GLY GLY H . n D 1 151 PHE 151 323 323 PHE PHE H . n D 1 152 ASP 152 324 324 ASP ASP H . n D 1 153 GLU 153 325 325 GLU GLU H . n D 1 154 THR 154 326 326 THR THR H . n D 1 155 LEU 155 327 327 LEU LEU H . n D 1 156 ALA 156 328 328 ALA ALA H . n D 1 157 PHE 157 329 329 PHE PHE H . n D 1 158 SER 158 330 330 SER SER H . n D 1 159 GLY 159 331 331 GLY GLY H . n D 1 160 ARG 160 332 332 ARG ARG H . n D 1 161 LEU 161 333 333 LEU LEU H . n D 1 162 THR 162 334 334 THR THR H . n D 1 163 GLY 163 335 335 GLY GLY H . n D 1 164 PHE 164 336 336 PHE PHE H . n D 1 165 ASN 165 337 337 ASN ASN H . n D 1 166 ILE 166 338 338 ILE ILE H . n D 1 167 TRP 167 339 339 TRP TRP H . n D 1 168 ASP 168 340 340 ASP ASP H . n D 1 169 SER 169 341 341 SER SER H . n D 1 170 VAL 170 342 342 VAL VAL H . n D 1 171 LEU 171 343 343 LEU LEU H . n D 1 172 SER 172 344 344 SER SER H . n D 1 173 ASN 173 345 345 ASN ASN H . n D 1 174 GLU 174 346 346 GLU GLU H . n D 1 175 GLU 175 347 347 GLU GLU H . n D 1 176 ILE 176 348 348 ILE ILE H . n D 1 177 ARG 177 349 349 ARG ARG H . n D 1 178 GLU 178 350 350 GLU GLU H . n D 1 179 THR 179 351 351 THR THR H . n D 1 180 GLY 180 352 352 GLY GLY H . n D 1 181 GLY 181 353 353 GLY GLY H . n D 1 182 ALA 182 354 354 ALA ALA H . n D 1 183 GLU 183 355 355 GLU GLU H . n D 1 184 SER 184 356 356 SER SER H . n D 1 185 CYS 185 357 357 CYS CYS H . n D 1 186 HIS 186 358 358 HIS HIS H . n D 1 187 ILE 187 359 359 ILE ILE H . n D 1 188 ARG 188 360 360 ARG ARG H . n D 1 189 GLY 189 361 361 GLY GLY H . n D 1 190 ASN 190 362 362 ASN ASN H . n D 1 191 ILE 191 363 363 ILE ILE H . n D 1 192 VAL 192 364 364 VAL VAL H . n D 1 193 GLY 193 365 365 GLY GLY H . n D 1 194 TRP 194 366 366 TRP TRP H . n D 1 195 GLY 195 367 367 GLY GLY H . n D 1 196 VAL 196 368 368 VAL VAL H . n D 1 197 THR 197 369 369 THR THR H . n D 1 198 GLU 198 370 370 GLU GLU H . n D 1 199 ILE 199 371 371 ILE ILE H . n D 1 200 GLN 200 372 372 GLN GLN H . n D 1 201 PRO 201 373 373 PRO PRO H . n D 1 202 HIS 202 374 374 HIS HIS H . n D 1 203 GLY 203 375 375 GLY GLY H . n D 1 204 GLY 204 376 376 GLY GLY H . n D 1 205 ALA 205 377 377 ALA ALA H . n D 1 206 GLN 206 378 378 GLN GLN H . n D 1 207 TYR 207 379 379 TYR TYR H . n D 1 208 VAL 208 380 380 VAL VAL H . n D 1 209 SER 209 381 381 SER SER H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAG 1 1000 1000 NAG NAG A . F 2 NAG 1 1000 1000 NAG NAG B . G 2 NAG 1 1000 1000 NAG NAG G . H 2 NAG 1 1000 1000 NAG NAG H . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9K6N _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9K6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9K6N _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9K6N _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 6526 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.435 ? 8854 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 8.763 ? 898 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.048 ? 988 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.003 ? 1126 ? f_plane_restr ? ? # _struct.entry_id 9K6N _struct.title 'Pentraxin Domain of PTX3 Tetramer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9K6N _struct_keywords.text 'tetramer, immune system' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTX3_HUMAN _struct_ref.pdbx_db_accession P26022 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SWLPAGCETAILFPMRSKKIFGSVHPVRPMRLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQSIVFVVGGE ENKLVAEAMVSLGRWTHLCGTWNSEEGLTSLWVNGELAATTVEMATGHIVPEGGILQIGQEKNGCCVGGGFDETLAFSGR LTGFNIWDSVLSNEEIRETGGAESCHIRGNIVGWGVTEIQPHGGAQYVS ; _struct_ref.pdbx_align_begin 173 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9K6N A 1 ? 209 ? P26022 173 ? 381 ? 173 381 2 1 9K6N B 1 ? 209 ? P26022 173 ? 381 ? 173 381 3 1 9K6N G 1 ? 209 ? P26022 173 ? 381 ? 173 381 4 1 9K6N H 1 ? 209 ? P26022 173 ? 381 ? 173 381 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 152 ? ALA A 156 ? ASP A 324 ALA A 328 5 ? 5 HELX_P HELX_P2 AA2 SER A 172 ? GLY A 180 ? SER A 344 GLY A 352 1 ? 9 HELX_P HELX_P3 AA3 GLU A 183 ? ILE A 187 ? GLU A 355 ILE A 359 5 ? 5 HELX_P HELX_P4 AA4 ASP B 152 ? ALA B 156 ? ASP B 324 ALA B 328 5 ? 5 HELX_P HELX_P5 AA5 SER B 172 ? THR B 179 ? SER B 344 THR B 351 1 ? 8 HELX_P HELX_P6 AA6 ASP C 152 ? ALA C 156 ? ASP G 324 ALA G 328 5 ? 5 HELX_P HELX_P7 AA7 SER C 172 ? GLY C 180 ? SER G 344 GLY G 352 1 ? 9 HELX_P HELX_P8 AA8 GLY C 181 ? ILE C 187 ? GLY G 353 ILE G 359 5 ? 7 HELX_P HELX_P9 AA9 ASP D 152 ? ALA D 156 ? ASP H 324 ALA H 328 5 ? 5 HELX_P HELX_P10 AB1 SER D 172 ? THR D 179 ? SER H 344 THR H 351 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 99 SG ? ? A CYS 210 A CYS 271 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 145 SG ? ? ? 1_555 D CYS 146 SG ? ? A CYS 317 H CYS 318 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf3 disulf ? ? A CYS 146 SG ? ? ? 1_555 D CYS 145 SG ? ? A CYS 318 H CYS 317 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? B CYS 7 SG ? ? ? 1_555 B CYS 185 SG ? ? B CYS 179 B CYS 357 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf5 disulf ? ? B CYS 145 SG ? ? ? 1_555 C CYS 146 SG ? ? B CYS 317 G CYS 318 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf6 disulf ? ? B CYS 146 SG ? ? ? 1_555 C CYS 145 SG ? ? B CYS 318 G CYS 317 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf7 disulf ? ? C CYS 7 SG ? ? ? 1_555 C CYS 185 SG ? ? G CYS 179 G CYS 357 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf8 disulf ? ? C CYS 38 SG ? ? ? 1_555 C CYS 99 SG ? ? G CYS 210 G CYS 271 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf9 disulf ? ? D CYS 7 SG ? ? ? 1_555 D CYS 185 SG ? ? H CYS 179 H CYS 357 1_555 ? ? ? ? ? ? ? 2.028 ? ? covale1 covale one ? A ASN 48 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 220 A NAG 1000 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale2 covale one ? B ASN 48 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 220 B NAG 1000 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale3 covale one ? C ASN 48 ND2 ? ? ? 1_555 G NAG . C1 ? ? G ASN 220 G NAG 1000 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale4 covale one ? D ASN 48 ND2 ? ? ? 1_555 H NAG . C1 ? ? H ASN 220 H NAG 1000 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG E . ? ASN A 48 ? NAG A 1000 ? 1_555 ASN A 220 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG F . ? ASN B 48 ? NAG B 1000 ? 1_555 ASN B 220 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG G . ? ASN C 48 ? NAG G 1000 ? 1_555 ASN G 220 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG H . ? ASN D 48 ? NAG H 1000 ? 1_555 ASN H 220 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 CYS A 38 ? CYS A 99 ? CYS A 210 ? 1_555 CYS A 271 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 145 ? CYS D 146 ? CYS A 317 ? 1_555 CYS H 318 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 146 ? CYS D 145 ? CYS A 318 ? 1_555 CYS H 317 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 7 ? CYS B 185 ? CYS B 179 ? 1_555 CYS B 357 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS B 145 ? CYS C 146 ? CYS B 317 ? 1_555 CYS G 318 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS B 146 ? CYS C 145 ? CYS B 318 ? 1_555 CYS G 317 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS C 7 ? CYS C 185 ? CYS G 179 ? 1_555 CYS G 357 ? 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS C 38 ? CYS C 99 ? CYS G 210 ? 1_555 CYS G 271 ? 1_555 SG SG . . . None 'Disulfide bridge' 13 CYS D 7 ? CYS D 185 ? CYS H 179 ? 1_555 CYS H 357 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 6 ? AA5 ? 7 ? AA6 ? 7 ? AA7 ? 4 ? AA8 ? 4 ? AA9 ? 7 ? AB1 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA6 6 7 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AA9 4 5 ? anti-parallel AA9 5 6 ? anti-parallel AA9 6 7 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB1 4 5 ? anti-parallel AB1 5 6 ? anti-parallel AB1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 11 ? PHE A 13 ? ILE A 183 PHE A 185 AA1 2 GLY A 159 ? TRP A 167 ? GLY A 331 TRP A 339 AA1 3 SER A 36 ? ALA A 43 ? SER A 208 ALA A 215 AA1 4 THR A 96 ? ASN A 103 ? THR A 268 ASN A 275 AA1 5 LEU A 108 ? VAL A 113 ? LEU A 280 VAL A 285 AA1 6 GLU A 116 ? THR A 121 ? GLU A 288 THR A 293 AA2 1 PHE A 53 ? GLY A 56 ? PHE A 225 GLY A 228 AA2 2 ILE A 135 ? ILE A 138 ? ILE A 307 ILE A 310 AA2 3 GLY A 22 ? HIS A 25 ? GLY A 194 HIS A 197 AA2 4 GLU A 198 ? ILE A 199 ? GLU A 370 ILE A 371 AA3 1 THR A 50 ? ILE A 51 ? THR A 222 ILE A 223 AA3 2 ILE A 64 ? LEU A 68 ? ILE A 236 LEU A 240 AA3 3 ILE A 73 ? VAL A 77 ? ILE A 245 VAL A 249 AA3 4 VAL A 85 ? ALA A 86 ? VAL A 257 ALA A 258 AA4 1 ILE B 11 ? PHE B 13 ? ILE B 183 PHE B 185 AA4 2 GLY B 159 ? THR B 162 ? GLY B 331 THR B 334 AA4 3 CYS B 38 ? ALA B 43 ? CYS B 210 ALA B 215 AA4 4 THR B 96 ? TRP B 102 ? THR B 268 TRP B 274 AA4 5 THR B 109 ? VAL B 113 ? THR B 281 VAL B 285 AA4 6 GLU B 116 ? THR B 121 ? GLU B 288 THR B 293 AA5 1 VAL B 85 ? ALA B 86 ? VAL B 257 ALA B 258 AA5 2 SER B 72 ? VAL B 77 ? SER B 244 VAL B 249 AA5 3 ILE B 64 ? SER B 69 ? ILE B 236 SER B 241 AA5 4 THR B 50 ? GLY B 56 ? THR B 222 GLY B 228 AA5 5 ILE B 135 ? ILE B 138 ? ILE B 307 ILE B 310 AA5 6 PHE B 21 ? HIS B 25 ? PHE B 193 HIS B 197 AA5 7 GLU B 198 ? HIS B 202 ? GLU B 370 HIS B 374 AA6 1 GLU C 116 ? THR C 121 ? GLU G 288 THR G 293 AA6 2 LEU C 108 ? VAL C 113 ? LEU G 280 VAL G 285 AA6 3 THR C 96 ? ASN C 103 ? THR G 268 ASN G 275 AA6 4 SER C 36 ? ALA C 43 ? SER G 208 ALA G 215 AA6 5 GLY C 159 ? TRP C 167 ? GLY G 331 TRP G 339 AA6 6 ALA C 10 ? PHE C 13 ? ALA G 182 PHE G 185 AA6 7 GLN C 206 ? VAL C 208 ? GLN G 378 VAL G 380 AA7 1 PHE C 53 ? GLY C 56 ? PHE G 225 GLY G 228 AA7 2 ILE C 135 ? ILE C 138 ? ILE G 307 ILE G 310 AA7 3 PHE C 21 ? VAL C 24 ? PHE G 193 VAL G 196 AA7 4 ILE C 199 ? HIS C 202 ? ILE G 371 HIS G 374 AA8 1 THR C 50 ? ILE C 51 ? THR G 222 ILE G 223 AA8 2 ILE C 64 ? LEU C 68 ? ILE G 236 LEU G 240 AA8 3 ILE C 73 ? VAL C 77 ? ILE G 245 VAL G 249 AA8 4 VAL C 85 ? ALA C 86 ? VAL G 257 ALA G 258 AA9 1 GLU D 116 ? THR D 121 ? GLU H 288 THR H 293 AA9 2 LEU D 108 ? VAL D 113 ? LEU H 280 VAL H 285 AA9 3 THR D 96 ? ASN D 103 ? THR H 268 ASN H 275 AA9 4 ALA D 37 ? ALA D 43 ? ALA H 209 ALA H 215 AA9 5 GLY D 159 ? ILE D 166 ? GLY H 331 ILE H 338 AA9 6 ILE D 11 ? PHE D 13 ? ILE H 183 PHE H 185 AA9 7 GLN D 206 ? TYR D 207 ? GLN H 378 TYR H 379 AB1 1 VAL D 85 ? GLU D 87 ? VAL H 257 GLU H 259 AB1 2 SER D 72 ? VAL D 77 ? SER H 244 VAL H 249 AB1 3 ILE D 64 ? SER D 69 ? ILE H 236 SER H 241 AB1 4 THR D 50 ? GLY D 56 ? THR H 222 GLY H 228 AB1 5 ILE D 135 ? ILE D 138 ? ILE H 307 ILE H 310 AB1 6 PHE D 21 ? HIS D 25 ? PHE H 193 HIS H 197 AB1 7 GLU D 198 ? HIS D 202 ? GLU H 370 HIS H 374 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 13 ? N PHE A 185 O GLY A 159 ? O GLY A 331 AA1 2 3 O TRP A 167 ? O TRP A 339 N SER A 36 ? N SER A 208 AA1 3 4 N ILE A 39 ? N ILE A 211 O LEU A 98 ? O LEU A 270 AA1 4 5 N THR A 101 ? N THR A 273 O SER A 110 ? O SER A 282 AA1 5 6 N LEU A 111 ? N LEU A 283 O ALA A 118 ? O ALA A 290 AA2 1 2 N GLY A 56 ? N GLY A 228 O ILE A 135 ? O ILE A 307 AA2 2 3 O LEU A 136 ? O LEU A 308 N VAL A 24 ? N VAL A 196 AA2 3 4 N HIS A 25 ? N HIS A 197 O GLU A 198 ? O GLU A 370 AA3 1 2 N THR A 50 ? N THR A 222 O LEU A 68 ? O LEU A 240 AA3 2 3 N TYR A 67 ? N TYR A 239 O VAL A 74 ? O VAL A 246 AA3 3 4 N ILE A 73 ? N ILE A 245 O ALA A 86 ? O ALA A 258 AA4 1 2 N PHE B 13 ? N PHE B 185 O GLY B 159 ? O GLY B 331 AA4 2 3 O THR B 162 ? O THR B 334 N TRP B 40 ? N TRP B 212 AA4 3 4 N ILE B 39 ? N ILE B 211 O LEU B 98 ? O LEU B 270 AA4 4 5 N CYS B 99 ? N CYS B 271 O TRP B 112 ? O TRP B 284 AA4 5 6 N THR B 109 ? N THR B 281 O THR B 121 ? O THR B 293 AA5 1 2 O ALA B 86 ? O ALA B 258 N ILE B 73 ? N ILE B 245 AA5 2 3 O SER B 72 ? O SER B 244 N SER B 69 ? N SER B 241 AA5 3 4 O LEU B 68 ? O LEU B 240 N THR B 50 ? N THR B 222 AA5 4 5 N SER B 54 ? N SER B 226 O GLN B 137 ? O GLN B 309 AA5 5 6 O ILE B 138 ? O ILE B 310 N GLY B 22 ? N GLY B 194 AA5 6 7 N SER B 23 ? N SER B 195 O GLN B 200 ? O GLN B 372 AA6 1 2 O ALA C 119 ? O ALA G 291 N LEU C 111 ? N LEU G 283 AA6 2 3 O TRP C 112 ? O TRP G 284 N CYS C 99 ? N CYS G 271 AA6 3 4 O LEU C 98 ? O LEU G 270 N ILE C 39 ? N ILE G 211 AA6 4 5 N SER C 36 ? N SER G 208 O TRP C 167 ? O TRP G 339 AA6 5 6 O GLY C 159 ? O GLY G 331 N PHE C 13 ? N PHE G 185 AA6 6 7 N LEU C 12 ? N LEU G 184 O GLN C 206 ? O GLN G 378 AA7 1 2 N GLY C 56 ? N GLY G 228 O ILE C 135 ? O ILE G 307 AA7 2 3 O ILE C 138 ? O ILE G 310 N GLY C 22 ? N GLY G 194 AA7 3 4 N PHE C 21 ? N PHE G 193 O HIS C 202 ? O HIS G 374 AA8 1 2 N THR C 50 ? N THR G 222 O LEU C 68 ? O LEU G 240 AA8 2 3 N TYR C 67 ? N TYR G 239 O VAL C 74 ? O VAL G 246 AA8 3 4 N ILE C 73 ? N ILE G 245 O ALA C 86 ? O ALA G 258 AA9 1 2 O THR D 121 ? O THR H 293 N THR D 109 ? N THR H 281 AA9 2 3 O TRP D 112 ? O TRP H 284 N CYS D 99 ? N CYS H 271 AA9 3 4 O GLY D 100 ? O GLY H 272 N ALA D 37 ? N ALA H 209 AA9 4 5 N CYS D 38 ? N CYS H 210 O ASN D 165 ? O ASN H 337 AA9 5 6 O GLY D 159 ? O GLY H 331 N PHE D 13 ? N PHE H 185 AA9 6 7 N LEU D 12 ? N LEU H 184 O GLN D 206 ? O GLN H 378 AB1 1 2 O ALA D 86 ? O ALA H 258 N ILE D 73 ? N ILE H 245 AB1 2 3 O VAL D 74 ? O VAL H 246 N TYR D 67 ? N TYR H 239 AB1 3 4 O ILE D 64 ? O ILE H 236 N TYR D 55 ? N TYR H 227 AB1 4 5 N SER D 54 ? N SER H 226 O GLN D 137 ? O GLN H 309 AB1 5 6 O ILE D 138 ? O ILE H 310 N GLY D 22 ? N GLY H 194 AB1 6 7 N SER D 23 ? N SER H 195 O GLN D 200 ? O GLN H 372 # _pdbx_entry_details.entry_id 9K6N _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 182 ? ? -161.17 116.38 2 1 VAL A 368 ? ? -125.47 -55.14 3 1 LYS B 191 ? ? -140.05 31.40 4 1 SER B 206 ? ? -160.80 114.17 5 1 TYR B 242 ? ? 54.92 -111.60 6 1 GLU B 295 ? ? 60.27 64.72 7 1 VAL B 368 ? ? -126.25 -50.27 8 1 LYS G 221 ? ? -161.50 117.72 9 1 ILE G 363 ? ? -124.40 -54.91 10 1 LYS H 191 ? ? -140.22 31.41 11 1 SER H 206 ? ? -161.38 116.11 12 1 THR H 229 ? ? -79.68 -169.82 13 1 TYR H 242 ? ? 55.88 -107.30 14 1 VAL H 368 ? ? -123.21 -61.58 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9K6N _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9K6N _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.14 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 92771 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type CELL _em_entity_assembly.name 'Pentraxin Domain of PTX3 Tetramer' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9K6N _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI MORGAGNI' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.mode 'DARK FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 5000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source OTHER _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9K6N _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name NITROGEN _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9K6N _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state CELL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 173 ? A SER 1 2 1 Y 1 A TRP 174 ? A TRP 2 3 1 Y 1 A LEU 175 ? A LEU 3 4 1 Y 1 A PRO 176 ? A PRO 4 5 1 Y 1 A ALA 177 ? A ALA 5 6 1 Y 1 G SER 173 ? C SER 1 7 1 Y 1 G TRP 174 ? C TRP 2 8 1 Y 1 G LEU 175 ? C LEU 3 9 1 Y 1 G PRO 176 ? C PRO 4 10 1 Y 1 G ALA 177 ? C ALA 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-10-22 _em_admin.deposition_site PDBJ _em_admin.entry_id 9K6N _em_admin.last_update 2025-10-22 _em_admin.map_release_date 2025-10-22 _em_admin.title 'Pentraxin Domain of PTX3 Tetramer' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING ONLY' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell 293F _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.ncbi_tax_id 40674 _em_entity_assembly_recombinant.organism Mammalia _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model OTHER _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? PHENIX ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration 0.5 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9K6N _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #