HEADER METAL BINDING PROTEIN 24-OCT-24 9K8G TITLE CRYO-EM STRUCTURE OF C3 SYMMETRIC INTERFACE OF DESIGNED ZINC-INDUCED TITLE 2 TETRAHEDRON CAGE-T32-ZN1-HEHE-35 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAGE-T32-ZN1-HEHE-35; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ZINC-BINDING PROTEIN, METAL BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.N.QU,L.X.CAO REVDAT 1 29-OCT-25 9K8G 0 JRNL AUTH Y.N.QU,L.X.CAO JRNL TITL DE NOVO DESIGN OF METAL ION REGULATED PROTEIN ASSEMBLIES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.750 REMARK 3 NUMBER OF PARTICLES : 106492 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9K8G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1300052938. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CAGE-T32-ZN1-HEHE-35 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 GLY A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 GLY A -6 REMARK 465 LEU A -5 REMARK 465 GLU A -4 REMARK 465 VAL A -3 REMARK 465 LEU A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 LEU A 91 REMARK 465 ASN A 92 REMARK 465 GLU A 93 REMARK 465 PRO A 94 REMARK 465 LYS A 95 REMARK 465 MET A 96 REMARK 465 VAL A 97 REMARK 465 LYS A 98 REMARK 465 ILE A 99 REMARK 465 VAL A 100 REMARK 465 GLU A 101 REMARK 465 ILE A 102 REMARK 465 LEU A 103 REMARK 465 GLU A 104 REMARK 465 GLU A 105 REMARK 465 MET A 106 REMARK 465 TYR A 107 REMARK 465 LYS A 108 REMARK 465 ARG A 109 REMARK 465 ALA A 110 REMARK 465 VAL A 111 REMARK 465 LYS A 112 REMARK 465 LYS A 113 REMARK 465 GLY A 114 REMARK 465 ASP A 115 REMARK 465 GLU A 116 REMARK 465 GLU A 117 REMARK 465 THR A 118 REMARK 465 ILE A 119 REMARK 465 LYS A 120 REMARK 465 LEU A 121 REMARK 465 LEU A 122 REMARK 465 LYS A 123 REMARK 465 GLU A 124 REMARK 465 MET A 125 REMARK 465 LEU A 126 REMARK 465 GLU A 127 REMARK 465 VAL A 128 REMARK 465 LEU A 129 REMARK 465 PHE A 130 REMARK 465 GLU A 131 REMARK 465 ILE A 132 REMARK 465 ALA A 133 REMARK 465 LYS A 134 REMARK 465 ALA A 135 REMARK 465 ILE A 136 REMARK 465 ALA A 137 REMARK 465 ASN A 138 REMARK 465 ASN A 139 REMARK 465 ASP A 140 REMARK 465 LYS A 141 REMARK 465 GLU A 142 REMARK 465 GLU A 143 REMARK 465 VAL A 144 REMARK 465 LYS A 145 REMARK 465 LYS A 146 REMARK 465 LEU A 147 REMARK 465 LEU A 148 REMARK 465 ALA A 149 REMARK 465 LYS A 150 REMARK 465 PHE A 151 REMARK 465 VAL A 152 REMARK 465 LEU A 153 REMARK 465 LEU A 154 REMARK 465 LEU A 155 REMARK 465 LEU A 156 REMARK 465 GLU A 157 REMARK 465 MET A 158 REMARK 465 VAL A 159 REMARK 465 LYS A 160 REMARK 465 ARG A 161 REMARK 465 ALA A 162 REMARK 465 ILE A 163 REMARK 465 LYS A 164 REMARK 465 LYS A 165 REMARK 465 GLY A 166 REMARK 465 ASP A 167 REMARK 465 LYS A 168 REMARK 465 GLU A 169 REMARK 465 THR A 170 REMARK 465 LEU A 171 REMARK 465 LYS A 172 REMARK 465 LEU A 173 REMARK 465 ILE A 174 REMARK 465 HIS A 175 REMARK 465 GLU A 176 REMARK 465 ILE A 177 REMARK 465 LEU A 178 REMARK 465 ASP A 179 REMARK 465 ILE A 180 REMARK 465 ILE A 181 REMARK 465 ALA A 182 REMARK 465 GLU A 183 REMARK 465 ILE A 184 REMARK 465 PHE A 185 REMARK 465 GLU A 186 REMARK 465 GLU A 187 REMARK 465 LEU A 188 REMARK 465 GLY A 189 REMARK 465 ASP A 190 REMARK 465 ASP A 191 REMARK 465 GLU A 192 REMARK 465 LEU A 193 REMARK 465 ALA A 194 REMARK 465 HIS A 195 REMARK 465 ALA A 196 REMARK 465 ALA A 197 REMARK 465 ARG A 198 REMARK 465 LEU A 199 REMARK 465 VAL A 200 REMARK 465 SER A 201 REMARK 465 LYS A 202 REMARK 465 ALA A 203 REMARK 465 ALA A 204 REMARK 465 GLU A 205 REMARK 465 LEU A 206 REMARK 465 ALA A 207 REMARK 465 LEU A 208 REMARK 465 LYS A 209 REMARK 465 GLY A 210 REMARK 465 LYS A 211 REMARK 465 LYS A 212 REMARK 465 GLU A 213 REMARK 465 GLU A 214 REMARK 465 ALA A 215 REMARK 465 GLU A 216 REMARK 465 LYS A 217 REMARK 465 LEU A 218 REMARK 465 PHE A 219 REMARK 465 GLU A 220 REMARK 465 ILE A 221 REMARK 465 ALA A 222 REMARK 465 GLU A 223 REMARK 465 GLU A 224 REMARK 465 GLU A 225 REMARK 465 LEU A 226 REMARK 465 LYS A 227 REMARK 465 GLU A 228 REMARK 465 LEU A 229 REMARK 465 ILE A 230 REMARK 465 GLU A 231 REMARK 465 LYS A 232 REMARK 465 MET B -18 REMARK 465 GLY B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 GLY B -6 REMARK 465 LEU B -5 REMARK 465 GLU B -4 REMARK 465 VAL B -3 REMARK 465 LEU B -2 REMARK 465 PHE B -1 REMARK 465 GLN B 0 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 LEU B 91 REMARK 465 ASN B 92 REMARK 465 GLU B 93 REMARK 465 PRO B 94 REMARK 465 LYS B 95 REMARK 465 MET B 96 REMARK 465 VAL B 97 REMARK 465 LYS B 98 REMARK 465 ILE B 99 REMARK 465 VAL B 100 REMARK 465 GLU B 101 REMARK 465 ILE B 102 REMARK 465 LEU B 103 REMARK 465 GLU B 104 REMARK 465 GLU B 105 REMARK 465 MET B 106 REMARK 465 TYR B 107 REMARK 465 LYS B 108 REMARK 465 ARG B 109 REMARK 465 ALA B 110 REMARK 465 VAL B 111 REMARK 465 LYS B 112 REMARK 465 LYS B 113 REMARK 465 GLY B 114 REMARK 465 ASP B 115 REMARK 465 GLU B 116 REMARK 465 GLU B 117 REMARK 465 THR B 118 REMARK 465 ILE B 119 REMARK 465 LYS B 120 REMARK 465 LEU B 121 REMARK 465 LEU B 122 REMARK 465 LYS B 123 REMARK 465 GLU B 124 REMARK 465 MET B 125 REMARK 465 LEU B 126 REMARK 465 GLU B 127 REMARK 465 VAL B 128 REMARK 465 LEU B 129 REMARK 465 PHE B 130 REMARK 465 GLU B 131 REMARK 465 ILE B 132 REMARK 465 ALA B 133 REMARK 465 LYS B 134 REMARK 465 ALA B 135 REMARK 465 ILE B 136 REMARK 465 ALA B 137 REMARK 465 ASN B 138 REMARK 465 ASN B 139 REMARK 465 ASP B 140 REMARK 465 LYS B 141 REMARK 465 GLU B 142 REMARK 465 GLU B 143 REMARK 465 VAL B 144 REMARK 465 LYS B 145 REMARK 465 LYS B 146 REMARK 465 LEU B 147 REMARK 465 LEU B 148 REMARK 465 ALA B 149 REMARK 465 LYS B 150 REMARK 465 PHE B 151 REMARK 465 VAL B 152 REMARK 465 LEU B 153 REMARK 465 LEU B 154 REMARK 465 LEU B 155 REMARK 465 LEU B 156 REMARK 465 GLU B 157 REMARK 465 MET B 158 REMARK 465 VAL B 159 REMARK 465 LYS B 160 REMARK 465 ARG B 161 REMARK 465 ALA B 162 REMARK 465 ILE B 163 REMARK 465 LYS B 164 REMARK 465 LYS B 165 REMARK 465 GLY B 166 REMARK 465 ASP B 167 REMARK 465 LYS B 168 REMARK 465 GLU B 169 REMARK 465 THR B 170 REMARK 465 LEU B 171 REMARK 465 LYS B 172 REMARK 465 LEU B 173 REMARK 465 ILE B 174 REMARK 465 HIS B 175 REMARK 465 GLU B 176 REMARK 465 ILE B 177 REMARK 465 LEU B 178 REMARK 465 ASP B 179 REMARK 465 ILE B 180 REMARK 465 ILE B 181 REMARK 465 ALA B 182 REMARK 465 GLU B 183 REMARK 465 ILE B 184 REMARK 465 PHE B 185 REMARK 465 GLU B 186 REMARK 465 GLU B 187 REMARK 465 LEU B 188 REMARK 465 GLY B 189 REMARK 465 ASP B 190 REMARK 465 ASP B 191 REMARK 465 GLU B 192 REMARK 465 LEU B 193 REMARK 465 ALA B 194 REMARK 465 HIS B 195 REMARK 465 ALA B 196 REMARK 465 ALA B 197 REMARK 465 ARG B 198 REMARK 465 LEU B 199 REMARK 465 VAL B 200 REMARK 465 SER B 201 REMARK 465 LYS B 202 REMARK 465 ALA B 203 REMARK 465 ALA B 204 REMARK 465 GLU B 205 REMARK 465 LEU B 206 REMARK 465 ALA B 207 REMARK 465 LEU B 208 REMARK 465 LYS B 209 REMARK 465 GLY B 210 REMARK 465 LYS B 211 REMARK 465 LYS B 212 REMARK 465 GLU B 213 REMARK 465 GLU B 214 REMARK 465 ALA B 215 REMARK 465 GLU B 216 REMARK 465 LYS B 217 REMARK 465 LEU B 218 REMARK 465 PHE B 219 REMARK 465 GLU B 220 REMARK 465 ILE B 221 REMARK 465 ALA B 222 REMARK 465 GLU B 223 REMARK 465 GLU B 224 REMARK 465 GLU B 225 REMARK 465 LEU B 226 REMARK 465 LYS B 227 REMARK 465 GLU B 228 REMARK 465 LEU B 229 REMARK 465 ILE B 230 REMARK 465 GLU B 231 REMARK 465 LYS B 232 REMARK 465 MET C -18 REMARK 465 GLY C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 HIS C -9 REMARK 465 SER C -8 REMARK 465 SER C -7 REMARK 465 GLY C -6 REMARK 465 LEU C -5 REMARK 465 GLU C -4 REMARK 465 VAL C -3 REMARK 465 LEU C -2 REMARK 465 PHE C -1 REMARK 465 GLN C 0 REMARK 465 GLY C 1 REMARK 465 PRO C 2 REMARK 465 GLY C 3 REMARK 465 GLY C 4 REMARK 465 LEU C 91 REMARK 465 ASN C 92 REMARK 465 GLU C 93 REMARK 465 PRO C 94 REMARK 465 LYS C 95 REMARK 465 MET C 96 REMARK 465 VAL C 97 REMARK 465 LYS C 98 REMARK 465 ILE C 99 REMARK 465 VAL C 100 REMARK 465 GLU C 101 REMARK 465 ILE C 102 REMARK 465 LEU C 103 REMARK 465 GLU C 104 REMARK 465 GLU C 105 REMARK 465 MET C 106 REMARK 465 TYR C 107 REMARK 465 LYS C 108 REMARK 465 ARG C 109 REMARK 465 ALA C 110 REMARK 465 VAL C 111 REMARK 465 LYS C 112 REMARK 465 LYS C 113 REMARK 465 GLY C 114 REMARK 465 ASP C 115 REMARK 465 GLU C 116 REMARK 465 GLU C 117 REMARK 465 THR C 118 REMARK 465 ILE C 119 REMARK 465 LYS C 120 REMARK 465 LEU C 121 REMARK 465 LEU C 122 REMARK 465 LYS C 123 REMARK 465 GLU C 124 REMARK 465 MET C 125 REMARK 465 LEU C 126 REMARK 465 GLU C 127 REMARK 465 VAL C 128 REMARK 465 LEU C 129 REMARK 465 PHE C 130 REMARK 465 GLU C 131 REMARK 465 ILE C 132 REMARK 465 ALA C 133 REMARK 465 LYS C 134 REMARK 465 ALA C 135 REMARK 465 ILE C 136 REMARK 465 ALA C 137 REMARK 465 ASN C 138 REMARK 465 ASN C 139 REMARK 465 ASP C 140 REMARK 465 LYS C 141 REMARK 465 GLU C 142 REMARK 465 GLU C 143 REMARK 465 VAL C 144 REMARK 465 LYS C 145 REMARK 465 LYS C 146 REMARK 465 LEU C 147 REMARK 465 LEU C 148 REMARK 465 ALA C 149 REMARK 465 LYS C 150 REMARK 465 PHE C 151 REMARK 465 VAL C 152 REMARK 465 LEU C 153 REMARK 465 LEU C 154 REMARK 465 LEU C 155 REMARK 465 LEU C 156 REMARK 465 GLU C 157 REMARK 465 MET C 158 REMARK 465 VAL C 159 REMARK 465 LYS C 160 REMARK 465 ARG C 161 REMARK 465 ALA C 162 REMARK 465 ILE C 163 REMARK 465 LYS C 164 REMARK 465 LYS C 165 REMARK 465 GLY C 166 REMARK 465 ASP C 167 REMARK 465 LYS C 168 REMARK 465 GLU C 169 REMARK 465 THR C 170 REMARK 465 LEU C 171 REMARK 465 LYS C 172 REMARK 465 LEU C 173 REMARK 465 ILE C 174 REMARK 465 HIS C 175 REMARK 465 GLU C 176 REMARK 465 ILE C 177 REMARK 465 LEU C 178 REMARK 465 ASP C 179 REMARK 465 ILE C 180 REMARK 465 ILE C 181 REMARK 465 ALA C 182 REMARK 465 GLU C 183 REMARK 465 ILE C 184 REMARK 465 PHE C 185 REMARK 465 GLU C 186 REMARK 465 GLU C 187 REMARK 465 LEU C 188 REMARK 465 GLY C 189 REMARK 465 ASP C 190 REMARK 465 ASP C 191 REMARK 465 GLU C 192 REMARK 465 LEU C 193 REMARK 465 ALA C 194 REMARK 465 HIS C 195 REMARK 465 ALA C 196 REMARK 465 ALA C 197 REMARK 465 ARG C 198 REMARK 465 LEU C 199 REMARK 465 VAL C 200 REMARK 465 SER C 201 REMARK 465 LYS C 202 REMARK 465 ALA C 203 REMARK 465 ALA C 204 REMARK 465 GLU C 205 REMARK 465 LEU C 206 REMARK 465 ALA C 207 REMARK 465 LEU C 208 REMARK 465 LYS C 209 REMARK 465 GLY C 210 REMARK 465 LYS C 211 REMARK 465 LYS C 212 REMARK 465 GLU C 213 REMARK 465 GLU C 214 REMARK 465 ALA C 215 REMARK 465 GLU C 216 REMARK 465 LYS C 217 REMARK 465 LEU C 218 REMARK 465 PHE C 219 REMARK 465 GLU C 220 REMARK 465 ILE C 221 REMARK 465 ALA C 222 REMARK 465 GLU C 223 REMARK 465 GLU C 224 REMARK 465 GLU C 225 REMARK 465 LEU C 226 REMARK 465 LYS C 227 REMARK 465 GLU C 228 REMARK 465 LEU C 229 REMARK 465 ILE C 230 REMARK 465 GLU C 231 REMARK 465 LYS C 232 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 36 NE2 REMARK 620 2 ASP A 40 OD2 94.8 REMARK 620 3 HIS C 47 NE2 87.6 115.0 REMARK 620 4 ASP C 51 OD1 93.9 130.8 113.7 REMARK 620 5 ASP C 51 OD2 154.1 99.0 106.0 60.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 47 NE2 REMARK 620 2 ASP A 51 OD1 110.7 REMARK 620 3 ASP A 51 OD2 119.4 55.3 REMARK 620 4 HIS B 36 NE2 95.9 80.3 129.8 REMARK 620 5 ASP B 40 OD2 128.3 121.0 91.1 93.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 47 NE2 REMARK 620 2 ASP B 51 OD1 127.3 REMARK 620 3 ASP B 51 OD2 105.5 59.4 REMARK 620 4 HIS C 36 NE2 104.9 82.8 141.1 REMARK 620 5 ASP C 40 OD2 115.9 116.3 99.2 88.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-62172 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF C3 SYMMETRIC INTERFACE OF DESIGNED ZINC- REMARK 900 INDUCED TETRAHEDRON CAGE-T32-ZN1-HEHE-35 DBREF 9K8G A -18 232 PDB 9K8G 9K8G -18 232 DBREF 9K8G B -18 232 PDB 9K8G 9K8G -18 232 DBREF 9K8G C -18 232 PDB 9K8G 9K8G -18 232 SEQRES 1 A 251 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 251 LEU GLU VAL LEU PHE GLN GLY PRO GLY GLY THR MET GLU SEQRES 3 A 251 GLU LEU ALA ARG ARG VAL GLY ARG ALA ILE GLU ARG TYR SEQRES 4 A 251 LEU ASN GLY GLU ILE ASN GLU VAL GLU LEU ALA LEU ALA SEQRES 5 A 251 VAL GLY HIS ILE PHE ARG ASP TYR GLY LEU GLU GLU LEU SEQRES 6 A 251 HIS GLU ILE VAL ASP ARG LEU LEU ALA GLY GLU ILE SER SEQRES 7 A 251 VAL LEU GLU MET LEU PHE ARG LEU TYR GLU ALA ALA VAL SEQRES 8 A 251 LYS LEU GLY LEU ASP ASP LEU LYS PHE VAL LEU LEU LYS SEQRES 9 A 251 ALA ILE PHE LYS LEU LEU ASN GLU PRO LYS MET VAL LYS SEQRES 10 A 251 ILE VAL GLU ILE LEU GLU GLU MET TYR LYS ARG ALA VAL SEQRES 11 A 251 LYS LYS GLY ASP GLU GLU THR ILE LYS LEU LEU LYS GLU SEQRES 12 A 251 MET LEU GLU VAL LEU PHE GLU ILE ALA LYS ALA ILE ALA SEQRES 13 A 251 ASN ASN ASP LYS GLU GLU VAL LYS LYS LEU LEU ALA LYS SEQRES 14 A 251 PHE VAL LEU LEU LEU LEU GLU MET VAL LYS ARG ALA ILE SEQRES 15 A 251 LYS LYS GLY ASP LYS GLU THR LEU LYS LEU ILE HIS GLU SEQRES 16 A 251 ILE LEU ASP ILE ILE ALA GLU ILE PHE GLU GLU LEU GLY SEQRES 17 A 251 ASP ASP GLU LEU ALA HIS ALA ALA ARG LEU VAL SER LYS SEQRES 18 A 251 ALA ALA GLU LEU ALA LEU LYS GLY LYS LYS GLU GLU ALA SEQRES 19 A 251 GLU LYS LEU PHE GLU ILE ALA GLU GLU GLU LEU LYS GLU SEQRES 20 A 251 LEU ILE GLU LYS SEQRES 1 B 251 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 251 LEU GLU VAL LEU PHE GLN GLY PRO GLY GLY THR MET GLU SEQRES 3 B 251 GLU LEU ALA ARG ARG VAL GLY ARG ALA ILE GLU ARG TYR SEQRES 4 B 251 LEU ASN GLY GLU ILE ASN GLU VAL GLU LEU ALA LEU ALA SEQRES 5 B 251 VAL GLY HIS ILE PHE ARG ASP TYR GLY LEU GLU GLU LEU SEQRES 6 B 251 HIS GLU ILE VAL ASP ARG LEU LEU ALA GLY GLU ILE SER SEQRES 7 B 251 VAL LEU GLU MET LEU PHE ARG LEU TYR GLU ALA ALA VAL SEQRES 8 B 251 LYS LEU GLY LEU ASP ASP LEU LYS PHE VAL LEU LEU LYS SEQRES 9 B 251 ALA ILE PHE LYS LEU LEU ASN GLU PRO LYS MET VAL LYS SEQRES 10 B 251 ILE VAL GLU ILE LEU GLU GLU MET TYR LYS ARG ALA VAL SEQRES 11 B 251 LYS LYS GLY ASP GLU GLU THR ILE LYS LEU LEU LYS GLU SEQRES 12 B 251 MET LEU GLU VAL LEU PHE GLU ILE ALA LYS ALA ILE ALA SEQRES 13 B 251 ASN ASN ASP LYS GLU GLU VAL LYS LYS LEU LEU ALA LYS SEQRES 14 B 251 PHE VAL LEU LEU LEU LEU GLU MET VAL LYS ARG ALA ILE SEQRES 15 B 251 LYS LYS GLY ASP LYS GLU THR LEU LYS LEU ILE HIS GLU SEQRES 16 B 251 ILE LEU ASP ILE ILE ALA GLU ILE PHE GLU GLU LEU GLY SEQRES 17 B 251 ASP ASP GLU LEU ALA HIS ALA ALA ARG LEU VAL SER LYS SEQRES 18 B 251 ALA ALA GLU LEU ALA LEU LYS GLY LYS LYS GLU GLU ALA SEQRES 19 B 251 GLU LYS LEU PHE GLU ILE ALA GLU GLU GLU LEU LYS GLU SEQRES 20 B 251 LEU ILE GLU LYS SEQRES 1 C 251 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 251 LEU GLU VAL LEU PHE GLN GLY PRO GLY GLY THR MET GLU SEQRES 3 C 251 GLU LEU ALA ARG ARG VAL GLY ARG ALA ILE GLU ARG TYR SEQRES 4 C 251 LEU ASN GLY GLU ILE ASN GLU VAL GLU LEU ALA LEU ALA SEQRES 5 C 251 VAL GLY HIS ILE PHE ARG ASP TYR GLY LEU GLU GLU LEU SEQRES 6 C 251 HIS GLU ILE VAL ASP ARG LEU LEU ALA GLY GLU ILE SER SEQRES 7 C 251 VAL LEU GLU MET LEU PHE ARG LEU TYR GLU ALA ALA VAL SEQRES 8 C 251 LYS LEU GLY LEU ASP ASP LEU LYS PHE VAL LEU LEU LYS SEQRES 9 C 251 ALA ILE PHE LYS LEU LEU ASN GLU PRO LYS MET VAL LYS SEQRES 10 C 251 ILE VAL GLU ILE LEU GLU GLU MET TYR LYS ARG ALA VAL SEQRES 11 C 251 LYS LYS GLY ASP GLU GLU THR ILE LYS LEU LEU LYS GLU SEQRES 12 C 251 MET LEU GLU VAL LEU PHE GLU ILE ALA LYS ALA ILE ALA SEQRES 13 C 251 ASN ASN ASP LYS GLU GLU VAL LYS LYS LEU LEU ALA LYS SEQRES 14 C 251 PHE VAL LEU LEU LEU LEU GLU MET VAL LYS ARG ALA ILE SEQRES 15 C 251 LYS LYS GLY ASP LYS GLU THR LEU LYS LEU ILE HIS GLU SEQRES 16 C 251 ILE LEU ASP ILE ILE ALA GLU ILE PHE GLU GLU LEU GLY SEQRES 17 C 251 ASP ASP GLU LEU ALA HIS ALA ALA ARG LEU VAL SER LYS SEQRES 18 C 251 ALA ALA GLU LEU ALA LEU LYS GLY LYS LYS GLU GLU ALA SEQRES 19 C 251 GLU LYS LEU PHE GLU ILE ALA GLU GLU GLU LEU LYS GLU SEQRES 20 C 251 LEU ILE GLU LYS HET ZN A 301 1 HET ZN B 301 1 HET ZN C 301 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) HELIX 1 AA1 THR A 5 GLY A 23 1 19 HELIX 2 AA2 ASN A 26 TYR A 41 1 16 HELIX 3 AA3 LEU A 43 GLY A 56 1 14 HELIX 4 AA4 SER A 59 GLY A 75 1 17 HELIX 5 AA5 LEU A 76 LEU A 90 1 15 HELIX 6 AA6 MET B 6 GLY B 23 1 18 HELIX 7 AA7 ASN B 26 ASP B 40 1 15 HELIX 8 AA8 LEU B 43 GLY B 56 1 14 HELIX 9 AA9 SER B 59 LYS B 73 1 15 HELIX 10 AB1 LEU B 76 LEU B 90 1 15 HELIX 11 AB2 MET C 6 ASN C 22 1 17 HELIX 12 AB3 ASN C 26 TYR C 41 1 16 HELIX 13 AB4 LEU C 43 GLY C 56 1 14 HELIX 14 AB5 SER C 59 GLY C 75 1 17 HELIX 15 AB6 LEU C 76 LEU C 90 1 15 LINK NE2 HIS A 36 ZN ZN C 301 1555 1555 2.14 LINK OD2 ASP A 40 ZN ZN C 301 1555 1555 2.05 LINK NE2 HIS A 47 ZN ZN A 301 1555 1555 2.10 LINK OD1 ASP A 51 ZN ZN A 301 1555 1555 2.59 LINK OD2 ASP A 51 ZN ZN A 301 1555 1555 2.00 LINK ZN ZN A 301 NE2 HIS B 36 1555 1555 2.13 LINK ZN ZN A 301 OD2 ASP B 40 1555 1555 2.05 LINK NE2 HIS B 47 ZN ZN B 301 1555 1555 2.12 LINK OD1 ASP B 51 ZN ZN B 301 1555 1555 2.36 LINK OD2 ASP B 51 ZN ZN B 301 1555 1555 2.03 LINK ZN ZN B 301 NE2 HIS C 36 1555 1555 2.11 LINK ZN ZN B 301 OD2 ASP C 40 1555 1555 2.06 LINK NE2 HIS C 47 ZN ZN C 301 1555 1555 2.39 LINK OD1 ASP C 51 ZN ZN C 301 1555 1555 2.27 LINK OD2 ASP C 51 ZN ZN C 301 1555 1555 2.07 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 252 2091 CONECT 290 2091 CONECT 350 2089 CONECT 381 2089 CONECT 382 2089 CONECT 948 2089 CONECT 986 2089 CONECT 1046 2090 CONECT 1077 2090 CONECT 1078 2090 CONECT 1644 2090 CONECT 1682 2090 CONECT 1742 2091 CONECT 1773 2091 CONECT 1774 2091 CONECT 2089 350 381 382 948 CONECT 2089 986 CONECT 2090 1046 1077 1078 1644 CONECT 2090 1682 CONECT 2091 252 290 1742 1773 CONECT 2091 1774 MASTER 634 0 3 15 0 0 0 6 2088 3 21 60 END