data_9K8S # _entry.id 9K8S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9K8S pdb_00009k8s 10.2210/pdb9k8s/pdb WWPDB D_1300052970 ? ? EMDB EMD-62179 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-10-29 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9K8S _pdbx_database_status.recvd_initial_deposition_date 2024-10-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of HE30 polymorph 1' _pdbx_database_related.db_id EMD-62179 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email xiawc@sioc.ac.cn _pdbx_contact_author.name_first Cong _pdbx_contact_author.name_last Liu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3425-6672 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xia, W.C.' 1 ? 'Liu, C.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Nano' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1936-086X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 19 _citation.language ? _citation.page_first 35977 _citation.page_last 35991 _citation.title 'Amyloid Fibrillation of a Ninjurin-1-Derived alpha-Helical Peptide: Structural Insights into Conformational Transition.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acsnano.5c14731 _citation.pdbx_database_id_PubMed 41037056 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, M.' 1 ? primary 'Xia, W.' 2 0000-0002-2100-7055 primary 'Zhao, D.' 3 ? primary 'Zhai, Z.' 4 ? primary 'Chen, R.' 5 ? primary 'Bai, X.' 6 ? primary 'Zhang, Z.' 7 ? primary 'Fan, H.' 8 ? primary 'Zhang, J.P.' 9 0000-0002-9216-2386 primary 'Liu, C.' 10 0000-0003-3425-6672 primary 'Jiao, F.' 11 0000-0001-5087-6228 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Ninjurin-1 _entity.formula_weight 3194.721 _entity.pdbx_number_of_molecules 12 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HE30,hNINJ1,Nerve injury-induced protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code HYASKKSAAESMLDIALLMANASQLKAVVE _entity_poly.pdbx_seq_one_letter_code_can HYASKKSAAESMLDIALLMANASQLKAVVE _entity_poly.pdbx_strand_id E,F,G,H,I,J,K,L,M,N,O,P _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 TYR n 1 3 ALA n 1 4 SER n 1 5 LYS n 1 6 LYS n 1 7 SER n 1 8 ALA n 1 9 ALA n 1 10 GLU n 1 11 SER n 1 12 MET n 1 13 LEU n 1 14 ASP n 1 15 ILE n 1 16 ALA n 1 17 LEU n 1 18 LEU n 1 19 MET n 1 20 ALA n 1 21 ASN n 1 22 ALA n 1 23 SER n 1 24 GLN n 1 25 LEU n 1 26 LYS n 1 27 ALA n 1 28 VAL n 1 29 VAL n 1 30 GLU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 30 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 40 ? ? ? E . n A 1 2 TYR 2 41 ? ? ? E . n A 1 3 ALA 3 42 ? ? ? E . n A 1 4 SER 4 43 43 SER SER E . n A 1 5 LYS 5 44 44 LYS LYS E . n A 1 6 LYS 6 45 45 LYS LYS E . n A 1 7 SER 7 46 46 SER SER E . n A 1 8 ALA 8 47 47 ALA ALA E . n A 1 9 ALA 9 48 48 ALA ALA E . n A 1 10 GLU 10 49 49 GLU GLU E . n A 1 11 SER 11 50 50 SER SER E . n A 1 12 MET 12 51 51 MET MET E . n A 1 13 LEU 13 52 52 LEU LEU E . n A 1 14 ASP 14 53 53 ASP ASP E . n A 1 15 ILE 15 54 54 ILE ILE E . n A 1 16 ALA 16 55 55 ALA ALA E . n A 1 17 LEU 17 56 56 LEU LEU E . n A 1 18 LEU 18 57 57 LEU LEU E . n A 1 19 MET 19 58 58 MET MET E . n A 1 20 ALA 20 59 59 ALA ALA E . n A 1 21 ASN 21 60 60 ASN ASN E . n A 1 22 ALA 22 61 61 ALA ALA E . n A 1 23 SER 23 62 62 SER SER E . n A 1 24 GLN 24 63 63 GLN GLN E . n A 1 25 LEU 25 64 64 LEU LEU E . n A 1 26 LYS 26 65 65 LYS LYS E . n A 1 27 ALA 27 66 66 ALA ALA E . n A 1 28 VAL 28 67 67 VAL VAL E . n A 1 29 VAL 29 68 ? ? ? E . n A 1 30 GLU 30 69 ? ? ? E . n B 1 1 HIS 1 40 ? ? ? F . n B 1 2 TYR 2 41 ? ? ? F . n B 1 3 ALA 3 42 ? ? ? F . n B 1 4 SER 4 43 ? ? ? F . n B 1 5 LYS 5 44 ? ? ? F . n B 1 6 LYS 6 45 ? ? ? F . n B 1 7 SER 7 46 ? ? ? F . n B 1 8 ALA 8 47 ? ? ? F . n B 1 9 ALA 9 48 ? ? ? F . n B 1 10 GLU 10 49 ? ? ? F . n B 1 11 SER 11 50 ? ? ? F . n B 1 12 MET 12 51 51 MET MET F . n B 1 13 LEU 13 52 52 LEU LEU F . n B 1 14 ASP 14 53 53 ASP ASP F . n B 1 15 ILE 15 54 54 ILE ILE F . n B 1 16 ALA 16 55 55 ALA ALA F . n B 1 17 LEU 17 56 56 LEU LEU F . n B 1 18 LEU 18 57 57 LEU LEU F . n B 1 19 MET 19 58 58 MET MET F . n B 1 20 ALA 20 59 59 ALA ALA F . n B 1 21 ASN 21 60 60 ASN ASN F . n B 1 22 ALA 22 61 61 ALA ALA F . n B 1 23 SER 23 62 62 SER SER F . n B 1 24 GLN 24 63 63 GLN GLN F . n B 1 25 LEU 25 64 64 LEU LEU F . n B 1 26 LYS 26 65 65 LYS LYS F . n B 1 27 ALA 27 66 66 ALA ALA F . n B 1 28 VAL 28 67 67 VAL VAL F . n B 1 29 VAL 29 68 68 VAL VAL F . n B 1 30 GLU 30 69 69 GLU GLU F . n C 1 1 HIS 1 40 ? ? ? G . n C 1 2 TYR 2 41 ? ? ? G . n C 1 3 ALA 3 42 ? ? ? G . n C 1 4 SER 4 43 43 SER SER G . n C 1 5 LYS 5 44 44 LYS LYS G . n C 1 6 LYS 6 45 45 LYS LYS G . n C 1 7 SER 7 46 46 SER SER G . n C 1 8 ALA 8 47 47 ALA ALA G . n C 1 9 ALA 9 48 48 ALA ALA G . n C 1 10 GLU 10 49 49 GLU GLU G . n C 1 11 SER 11 50 50 SER SER G . n C 1 12 MET 12 51 51 MET MET G . n C 1 13 LEU 13 52 52 LEU LEU G . n C 1 14 ASP 14 53 53 ASP ASP G . n C 1 15 ILE 15 54 54 ILE ILE G . n C 1 16 ALA 16 55 55 ALA ALA G . n C 1 17 LEU 17 56 56 LEU LEU G . n C 1 18 LEU 18 57 57 LEU LEU G . n C 1 19 MET 19 58 58 MET MET G . n C 1 20 ALA 20 59 59 ALA ALA G . n C 1 21 ASN 21 60 60 ASN ASN G . n C 1 22 ALA 22 61 61 ALA ALA G . n C 1 23 SER 23 62 62 SER SER G . n C 1 24 GLN 24 63 63 GLN GLN G . n C 1 25 LEU 25 64 64 LEU LEU G . n C 1 26 LYS 26 65 65 LYS LYS G . n C 1 27 ALA 27 66 66 ALA ALA G . n C 1 28 VAL 28 67 67 VAL VAL G . n C 1 29 VAL 29 68 ? ? ? G . n C 1 30 GLU 30 69 ? ? ? G . n D 1 1 HIS 1 40 ? ? ? H . n D 1 2 TYR 2 41 ? ? ? H . n D 1 3 ALA 3 42 ? ? ? H . n D 1 4 SER 4 43 ? ? ? H . n D 1 5 LYS 5 44 ? ? ? H . n D 1 6 LYS 6 45 ? ? ? H . n D 1 7 SER 7 46 ? ? ? H . n D 1 8 ALA 8 47 ? ? ? H . n D 1 9 ALA 9 48 ? ? ? H . n D 1 10 GLU 10 49 ? ? ? H . n D 1 11 SER 11 50 ? ? ? H . n D 1 12 MET 12 51 51 MET MET H . n D 1 13 LEU 13 52 52 LEU LEU H . n D 1 14 ASP 14 53 53 ASP ASP H . n D 1 15 ILE 15 54 54 ILE ILE H . n D 1 16 ALA 16 55 55 ALA ALA H . n D 1 17 LEU 17 56 56 LEU LEU H . n D 1 18 LEU 18 57 57 LEU LEU H . n D 1 19 MET 19 58 58 MET MET H . n D 1 20 ALA 20 59 59 ALA ALA H . n D 1 21 ASN 21 60 60 ASN ASN H . n D 1 22 ALA 22 61 61 ALA ALA H . n D 1 23 SER 23 62 62 SER SER H . n D 1 24 GLN 24 63 63 GLN GLN H . n D 1 25 LEU 25 64 64 LEU LEU H . n D 1 26 LYS 26 65 65 LYS LYS H . n D 1 27 ALA 27 66 66 ALA ALA H . n D 1 28 VAL 28 67 67 VAL VAL H . n D 1 29 VAL 29 68 68 VAL VAL H . n D 1 30 GLU 30 69 69 GLU GLU H . n E 1 1 HIS 1 40 ? ? ? I . n E 1 2 TYR 2 41 ? ? ? I . n E 1 3 ALA 3 42 ? ? ? I . n E 1 4 SER 4 43 43 SER SER I . n E 1 5 LYS 5 44 44 LYS LYS I . n E 1 6 LYS 6 45 45 LYS LYS I . n E 1 7 SER 7 46 46 SER SER I . n E 1 8 ALA 8 47 47 ALA ALA I . n E 1 9 ALA 9 48 48 ALA ALA I . n E 1 10 GLU 10 49 49 GLU GLU I . n E 1 11 SER 11 50 50 SER SER I . n E 1 12 MET 12 51 51 MET MET I . n E 1 13 LEU 13 52 52 LEU LEU I . n E 1 14 ASP 14 53 53 ASP ASP I . n E 1 15 ILE 15 54 54 ILE ILE I . n E 1 16 ALA 16 55 55 ALA ALA I . n E 1 17 LEU 17 56 56 LEU LEU I . n E 1 18 LEU 18 57 57 LEU LEU I . n E 1 19 MET 19 58 58 MET MET I . n E 1 20 ALA 20 59 59 ALA ALA I . n E 1 21 ASN 21 60 60 ASN ASN I . n E 1 22 ALA 22 61 61 ALA ALA I . n E 1 23 SER 23 62 62 SER SER I . n E 1 24 GLN 24 63 63 GLN GLN I . n E 1 25 LEU 25 64 64 LEU LEU I . n E 1 26 LYS 26 65 65 LYS LYS I . n E 1 27 ALA 27 66 66 ALA ALA I . n E 1 28 VAL 28 67 67 VAL VAL I . n E 1 29 VAL 29 68 ? ? ? I . n E 1 30 GLU 30 69 ? ? ? I . n F 1 1 HIS 1 40 ? ? ? J . n F 1 2 TYR 2 41 ? ? ? J . n F 1 3 ALA 3 42 ? ? ? J . n F 1 4 SER 4 43 ? ? ? J . n F 1 5 LYS 5 44 ? ? ? J . n F 1 6 LYS 6 45 ? ? ? J . n F 1 7 SER 7 46 ? ? ? J . n F 1 8 ALA 8 47 ? ? ? J . n F 1 9 ALA 9 48 ? ? ? J . n F 1 10 GLU 10 49 ? ? ? J . n F 1 11 SER 11 50 ? ? ? J . n F 1 12 MET 12 51 51 MET MET J . n F 1 13 LEU 13 52 52 LEU LEU J . n F 1 14 ASP 14 53 53 ASP ASP J . n F 1 15 ILE 15 54 54 ILE ILE J . n F 1 16 ALA 16 55 55 ALA ALA J . n F 1 17 LEU 17 56 56 LEU LEU J . n F 1 18 LEU 18 57 57 LEU LEU J . n F 1 19 MET 19 58 58 MET MET J . n F 1 20 ALA 20 59 59 ALA ALA J . n F 1 21 ASN 21 60 60 ASN ASN J . n F 1 22 ALA 22 61 61 ALA ALA J . n F 1 23 SER 23 62 62 SER SER J . n F 1 24 GLN 24 63 63 GLN GLN J . n F 1 25 LEU 25 64 64 LEU LEU J . n F 1 26 LYS 26 65 65 LYS LYS J . n F 1 27 ALA 27 66 66 ALA ALA J . n F 1 28 VAL 28 67 67 VAL VAL J . n F 1 29 VAL 29 68 68 VAL VAL J . n F 1 30 GLU 30 69 69 GLU GLU J . n G 1 1 HIS 1 40 ? ? ? K . n G 1 2 TYR 2 41 ? ? ? K . n G 1 3 ALA 3 42 ? ? ? K . n G 1 4 SER 4 43 43 SER SER K . n G 1 5 LYS 5 44 44 LYS LYS K . n G 1 6 LYS 6 45 45 LYS LYS K . n G 1 7 SER 7 46 46 SER SER K . n G 1 8 ALA 8 47 47 ALA ALA K . n G 1 9 ALA 9 48 48 ALA ALA K . n G 1 10 GLU 10 49 49 GLU GLU K . n G 1 11 SER 11 50 50 SER SER K . n G 1 12 MET 12 51 51 MET MET K . n G 1 13 LEU 13 52 52 LEU LEU K . n G 1 14 ASP 14 53 53 ASP ASP K . n G 1 15 ILE 15 54 54 ILE ILE K . n G 1 16 ALA 16 55 55 ALA ALA K . n G 1 17 LEU 17 56 56 LEU LEU K . n G 1 18 LEU 18 57 57 LEU LEU K . n G 1 19 MET 19 58 58 MET MET K . n G 1 20 ALA 20 59 59 ALA ALA K . n G 1 21 ASN 21 60 60 ASN ASN K . n G 1 22 ALA 22 61 61 ALA ALA K . n G 1 23 SER 23 62 62 SER SER K . n G 1 24 GLN 24 63 63 GLN GLN K . n G 1 25 LEU 25 64 64 LEU LEU K . n G 1 26 LYS 26 65 65 LYS LYS K . n G 1 27 ALA 27 66 66 ALA ALA K . n G 1 28 VAL 28 67 67 VAL VAL K . n G 1 29 VAL 29 68 ? ? ? K . n G 1 30 GLU 30 69 ? ? ? K . n H 1 1 HIS 1 40 ? ? ? L . n H 1 2 TYR 2 41 ? ? ? L . n H 1 3 ALA 3 42 ? ? ? L . n H 1 4 SER 4 43 ? ? ? L . n H 1 5 LYS 5 44 ? ? ? L . n H 1 6 LYS 6 45 ? ? ? L . n H 1 7 SER 7 46 ? ? ? L . n H 1 8 ALA 8 47 ? ? ? L . n H 1 9 ALA 9 48 ? ? ? L . n H 1 10 GLU 10 49 ? ? ? L . n H 1 11 SER 11 50 ? ? ? L . n H 1 12 MET 12 51 51 MET MET L . n H 1 13 LEU 13 52 52 LEU LEU L . n H 1 14 ASP 14 53 53 ASP ASP L . n H 1 15 ILE 15 54 54 ILE ILE L . n H 1 16 ALA 16 55 55 ALA ALA L . n H 1 17 LEU 17 56 56 LEU LEU L . n H 1 18 LEU 18 57 57 LEU LEU L . n H 1 19 MET 19 58 58 MET MET L . n H 1 20 ALA 20 59 59 ALA ALA L . n H 1 21 ASN 21 60 60 ASN ASN L . n H 1 22 ALA 22 61 61 ALA ALA L . n H 1 23 SER 23 62 62 SER SER L . n H 1 24 GLN 24 63 63 GLN GLN L . n H 1 25 LEU 25 64 64 LEU LEU L . n H 1 26 LYS 26 65 65 LYS LYS L . n H 1 27 ALA 27 66 66 ALA ALA L . n H 1 28 VAL 28 67 67 VAL VAL L . n H 1 29 VAL 29 68 68 VAL VAL L . n H 1 30 GLU 30 69 69 GLU GLU L . n I 1 1 HIS 1 40 ? ? ? M . n I 1 2 TYR 2 41 ? ? ? M . n I 1 3 ALA 3 42 ? ? ? M . n I 1 4 SER 4 43 43 SER SER M . n I 1 5 LYS 5 44 44 LYS LYS M . n I 1 6 LYS 6 45 45 LYS LYS M . n I 1 7 SER 7 46 46 SER SER M . n I 1 8 ALA 8 47 47 ALA ALA M . n I 1 9 ALA 9 48 48 ALA ALA M . n I 1 10 GLU 10 49 49 GLU GLU M . n I 1 11 SER 11 50 50 SER SER M . n I 1 12 MET 12 51 51 MET MET M . n I 1 13 LEU 13 52 52 LEU LEU M . n I 1 14 ASP 14 53 53 ASP ASP M . n I 1 15 ILE 15 54 54 ILE ILE M . n I 1 16 ALA 16 55 55 ALA ALA M . n I 1 17 LEU 17 56 56 LEU LEU M . n I 1 18 LEU 18 57 57 LEU LEU M . n I 1 19 MET 19 58 58 MET MET M . n I 1 20 ALA 20 59 59 ALA ALA M . n I 1 21 ASN 21 60 60 ASN ASN M . n I 1 22 ALA 22 61 61 ALA ALA M . n I 1 23 SER 23 62 62 SER SER M . n I 1 24 GLN 24 63 63 GLN GLN M . n I 1 25 LEU 25 64 64 LEU LEU M . n I 1 26 LYS 26 65 65 LYS LYS M . n I 1 27 ALA 27 66 66 ALA ALA M . n I 1 28 VAL 28 67 67 VAL VAL M . n I 1 29 VAL 29 68 ? ? ? M . n I 1 30 GLU 30 69 ? ? ? M . n J 1 1 HIS 1 40 ? ? ? N . n J 1 2 TYR 2 41 ? ? ? N . n J 1 3 ALA 3 42 ? ? ? N . n J 1 4 SER 4 43 ? ? ? N . n J 1 5 LYS 5 44 ? ? ? N . n J 1 6 LYS 6 45 ? ? ? N . n J 1 7 SER 7 46 ? ? ? N . n J 1 8 ALA 8 47 ? ? ? N . n J 1 9 ALA 9 48 ? ? ? N . n J 1 10 GLU 10 49 ? ? ? N . n J 1 11 SER 11 50 ? ? ? N . n J 1 12 MET 12 51 51 MET MET N . n J 1 13 LEU 13 52 52 LEU LEU N . n J 1 14 ASP 14 53 53 ASP ASP N . n J 1 15 ILE 15 54 54 ILE ILE N . n J 1 16 ALA 16 55 55 ALA ALA N . n J 1 17 LEU 17 56 56 LEU LEU N . n J 1 18 LEU 18 57 57 LEU LEU N . n J 1 19 MET 19 58 58 MET MET N . n J 1 20 ALA 20 59 59 ALA ALA N . n J 1 21 ASN 21 60 60 ASN ASN N . n J 1 22 ALA 22 61 61 ALA ALA N . n J 1 23 SER 23 62 62 SER SER N . n J 1 24 GLN 24 63 63 GLN GLN N . n J 1 25 LEU 25 64 64 LEU LEU N . n J 1 26 LYS 26 65 65 LYS LYS N . n J 1 27 ALA 27 66 66 ALA ALA N . n J 1 28 VAL 28 67 67 VAL VAL N . n J 1 29 VAL 29 68 68 VAL VAL N . n J 1 30 GLU 30 69 69 GLU GLU N . n K 1 1 HIS 1 40 ? ? ? O . n K 1 2 TYR 2 41 ? ? ? O . n K 1 3 ALA 3 42 ? ? ? O . n K 1 4 SER 4 43 43 SER SER O . n K 1 5 LYS 5 44 44 LYS LYS O . n K 1 6 LYS 6 45 45 LYS LYS O . n K 1 7 SER 7 46 46 SER SER O . n K 1 8 ALA 8 47 47 ALA ALA O . n K 1 9 ALA 9 48 48 ALA ALA O . n K 1 10 GLU 10 49 49 GLU GLU O . n K 1 11 SER 11 50 50 SER SER O . n K 1 12 MET 12 51 51 MET MET O . n K 1 13 LEU 13 52 52 LEU LEU O . n K 1 14 ASP 14 53 53 ASP ASP O . n K 1 15 ILE 15 54 54 ILE ILE O . n K 1 16 ALA 16 55 55 ALA ALA O . n K 1 17 LEU 17 56 56 LEU LEU O . n K 1 18 LEU 18 57 57 LEU LEU O . n K 1 19 MET 19 58 58 MET MET O . n K 1 20 ALA 20 59 59 ALA ALA O . n K 1 21 ASN 21 60 60 ASN ASN O . n K 1 22 ALA 22 61 61 ALA ALA O . n K 1 23 SER 23 62 62 SER SER O . n K 1 24 GLN 24 63 63 GLN GLN O . n K 1 25 LEU 25 64 64 LEU LEU O . n K 1 26 LYS 26 65 65 LYS LYS O . n K 1 27 ALA 27 66 66 ALA ALA O . n K 1 28 VAL 28 67 67 VAL VAL O . n K 1 29 VAL 29 68 ? ? ? O . n K 1 30 GLU 30 69 ? ? ? O . n L 1 1 HIS 1 40 ? ? ? P . n L 1 2 TYR 2 41 ? ? ? P . n L 1 3 ALA 3 42 ? ? ? P . n L 1 4 SER 4 43 ? ? ? P . n L 1 5 LYS 5 44 ? ? ? P . n L 1 6 LYS 6 45 ? ? ? P . n L 1 7 SER 7 46 ? ? ? P . n L 1 8 ALA 8 47 ? ? ? P . n L 1 9 ALA 9 48 ? ? ? P . n L 1 10 GLU 10 49 ? ? ? P . n L 1 11 SER 11 50 ? ? ? P . n L 1 12 MET 12 51 51 MET MET P . n L 1 13 LEU 13 52 52 LEU LEU P . n L 1 14 ASP 14 53 53 ASP ASP P . n L 1 15 ILE 15 54 54 ILE ILE P . n L 1 16 ALA 16 55 55 ALA ALA P . n L 1 17 LEU 17 56 56 LEU LEU P . n L 1 18 LEU 18 57 57 LEU LEU P . n L 1 19 MET 19 58 58 MET MET P . n L 1 20 ALA 20 59 59 ALA ALA P . n L 1 21 ASN 21 60 60 ASN ASN P . n L 1 22 ALA 22 61 61 ALA ALA P . n L 1 23 SER 23 62 62 SER SER P . n L 1 24 GLN 24 63 63 GLN GLN P . n L 1 25 LEU 25 64 64 LEU LEU P . n L 1 26 LYS 26 65 65 LYS LYS P . n L 1 27 ALA 27 66 66 ALA ALA P . n L 1 28 VAL 28 67 67 VAL VAL P . n L 1 29 VAL 29 68 68 VAL VAL P . n L 1 30 GLU 30 69 69 GLU GLU P . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9K8S _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9K8S _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9K8S _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9K8S _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 1890 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.817 ? 2520 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 6.805 ? 270 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.044 ? 342 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.001 ? 300 ? f_plane_restr ? ? # _struct.entry_id 9K8S _struct.title 'Cryo-EM structure of HE30 polymorph 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9K8S _struct_keywords.text 'helical fibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NINJ1_HUMAN _struct_ref.pdbx_db_accession Q92982 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code HYASKKSAAESMLDIALLMANASQLKAVVE _struct_ref.pdbx_align_begin 40 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9K8S E 1 ? 30 ? Q92982 40 ? 69 ? 40 69 2 1 9K8S F 1 ? 30 ? Q92982 40 ? 69 ? 40 69 3 1 9K8S G 1 ? 30 ? Q92982 40 ? 69 ? 40 69 4 1 9K8S H 1 ? 30 ? Q92982 40 ? 69 ? 40 69 5 1 9K8S I 1 ? 30 ? Q92982 40 ? 69 ? 40 69 6 1 9K8S J 1 ? 30 ? Q92982 40 ? 69 ? 40 69 7 1 9K8S K 1 ? 30 ? Q92982 40 ? 69 ? 40 69 8 1 9K8S L 1 ? 30 ? Q92982 40 ? 69 ? 40 69 9 1 9K8S M 1 ? 30 ? Q92982 40 ? 69 ? 40 69 10 1 9K8S N 1 ? 30 ? Q92982 40 ? 69 ? 40 69 11 1 9K8S O 1 ? 30 ? Q92982 40 ? 69 ? 40 69 12 1 9K8S P 1 ? 30 ? Q92982 40 ? 69 ? 40 69 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET C 19 ? ALA C 20 ? MET G 58 ALA G 59 AA1 2 MET A 19 ? ALA A 20 ? MET E 58 ALA E 59 AA1 3 MET E 19 ? ALA E 20 ? MET I 58 ALA I 59 AA2 1 LYS C 26 ? ALA C 27 ? LYS G 65 ALA G 66 AA2 2 LYS A 26 ? ALA A 27 ? LYS E 65 ALA E 66 AA2 3 LYS E 26 ? ALA E 27 ? LYS I 65 ALA I 66 AA3 1 MET I 19 ? ALA I 20 ? MET M 58 ALA M 59 AA3 2 MET G 19 ? ALA G 20 ? MET K 58 ALA K 59 AA3 3 MET K 19 ? ALA K 20 ? MET O 58 ALA O 59 AA4 1 LYS I 26 ? ALA I 27 ? LYS M 65 ALA M 66 AA4 2 LYS G 26 ? ALA G 27 ? LYS K 65 ALA K 66 AA4 3 LYS K 26 ? ALA K 27 ? LYS O 65 ALA O 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ALA C 20 ? O ALA G 59 N MET A 19 ? N MET E 58 AA1 2 3 N ALA A 20 ? N ALA E 59 O MET E 19 ? O MET I 58 AA2 1 2 O LYS C 26 ? O LYS G 65 N ALA A 27 ? N ALA E 66 AA2 2 3 N LYS A 26 ? N LYS E 65 O ALA E 27 ? O ALA I 66 AA3 1 2 O ALA I 20 ? O ALA M 59 N MET G 19 ? N MET K 58 AA3 2 3 N ALA G 20 ? N ALA K 59 O MET K 19 ? O MET O 58 AA4 1 2 O LYS I 26 ? O LYS M 65 N ALA G 27 ? N ALA K 66 AA4 2 3 N LYS G 26 ? N LYS K 65 O ALA K 27 ? O ALA O 66 # _pdbx_entry_details.entry_id 9K8S _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9K8S _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9K8S _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 523480 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type CELL _em_entity_assembly.name 'Cryo-EM structure of HE30 polymorph 1' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9K8S _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9K8S _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9K8S _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 E HIS 40 ? A HIS 1 2 1 Y 1 E TYR 41 ? A TYR 2 3 1 Y 1 E ALA 42 ? A ALA 3 4 1 Y 1 E VAL 68 ? A VAL 29 5 1 Y 1 E GLU 69 ? A GLU 30 6 1 Y 1 F HIS 40 ? B HIS 1 7 1 Y 1 F TYR 41 ? B TYR 2 8 1 Y 1 F ALA 42 ? B ALA 3 9 1 Y 1 F SER 43 ? B SER 4 10 1 Y 1 F LYS 44 ? B LYS 5 11 1 Y 1 F LYS 45 ? B LYS 6 12 1 Y 1 F SER 46 ? B SER 7 13 1 Y 1 F ALA 47 ? B ALA 8 14 1 Y 1 F ALA 48 ? B ALA 9 15 1 Y 1 F GLU 49 ? B GLU 10 16 1 Y 1 F SER 50 ? B SER 11 17 1 Y 1 G HIS 40 ? C HIS 1 18 1 Y 1 G TYR 41 ? C TYR 2 19 1 Y 1 G ALA 42 ? C ALA 3 20 1 Y 1 G VAL 68 ? C VAL 29 21 1 Y 1 G GLU 69 ? C GLU 30 22 1 Y 1 H HIS 40 ? D HIS 1 23 1 Y 1 H TYR 41 ? D TYR 2 24 1 Y 1 H ALA 42 ? D ALA 3 25 1 Y 1 H SER 43 ? D SER 4 26 1 Y 1 H LYS 44 ? D LYS 5 27 1 Y 1 H LYS 45 ? D LYS 6 28 1 Y 1 H SER 46 ? D SER 7 29 1 Y 1 H ALA 47 ? D ALA 8 30 1 Y 1 H ALA 48 ? D ALA 9 31 1 Y 1 H GLU 49 ? D GLU 10 32 1 Y 1 H SER 50 ? D SER 11 33 1 Y 1 I HIS 40 ? E HIS 1 34 1 Y 1 I TYR 41 ? E TYR 2 35 1 Y 1 I ALA 42 ? E ALA 3 36 1 Y 1 I VAL 68 ? E VAL 29 37 1 Y 1 I GLU 69 ? E GLU 30 38 1 Y 1 J HIS 40 ? F HIS 1 39 1 Y 1 J TYR 41 ? F TYR 2 40 1 Y 1 J ALA 42 ? F ALA 3 41 1 Y 1 J SER 43 ? F SER 4 42 1 Y 1 J LYS 44 ? F LYS 5 43 1 Y 1 J LYS 45 ? F LYS 6 44 1 Y 1 J SER 46 ? F SER 7 45 1 Y 1 J ALA 47 ? F ALA 8 46 1 Y 1 J ALA 48 ? F ALA 9 47 1 Y 1 J GLU 49 ? F GLU 10 48 1 Y 1 J SER 50 ? F SER 11 49 1 Y 1 K HIS 40 ? G HIS 1 50 1 Y 1 K TYR 41 ? G TYR 2 51 1 Y 1 K ALA 42 ? G ALA 3 52 1 Y 1 K VAL 68 ? G VAL 29 53 1 Y 1 K GLU 69 ? G GLU 30 54 1 Y 1 L HIS 40 ? H HIS 1 55 1 Y 1 L TYR 41 ? H TYR 2 56 1 Y 1 L ALA 42 ? H ALA 3 57 1 Y 1 L SER 43 ? H SER 4 58 1 Y 1 L LYS 44 ? H LYS 5 59 1 Y 1 L LYS 45 ? H LYS 6 60 1 Y 1 L SER 46 ? H SER 7 61 1 Y 1 L ALA 47 ? H ALA 8 62 1 Y 1 L ALA 48 ? H ALA 9 63 1 Y 1 L GLU 49 ? H GLU 10 64 1 Y 1 L SER 50 ? H SER 11 65 1 Y 1 M HIS 40 ? I HIS 1 66 1 Y 1 M TYR 41 ? I TYR 2 67 1 Y 1 M ALA 42 ? I ALA 3 68 1 Y 1 M VAL 68 ? I VAL 29 69 1 Y 1 M GLU 69 ? I GLU 30 70 1 Y 1 N HIS 40 ? J HIS 1 71 1 Y 1 N TYR 41 ? J TYR 2 72 1 Y 1 N ALA 42 ? J ALA 3 73 1 Y 1 N SER 43 ? J SER 4 74 1 Y 1 N LYS 44 ? J LYS 5 75 1 Y 1 N LYS 45 ? J LYS 6 76 1 Y 1 N SER 46 ? J SER 7 77 1 Y 1 N ALA 47 ? J ALA 8 78 1 Y 1 N ALA 48 ? J ALA 9 79 1 Y 1 N GLU 49 ? J GLU 10 80 1 Y 1 N SER 50 ? J SER 11 81 1 Y 1 O HIS 40 ? K HIS 1 82 1 Y 1 O TYR 41 ? K TYR 2 83 1 Y 1 O ALA 42 ? K ALA 3 84 1 Y 1 O VAL 68 ? K VAL 29 85 1 Y 1 O GLU 69 ? K GLU 30 86 1 Y 1 P HIS 40 ? L HIS 1 87 1 Y 1 P TYR 41 ? L TYR 2 88 1 Y 1 P ALA 42 ? L ALA 3 89 1 Y 1 P SER 43 ? L SER 4 90 1 Y 1 P LYS 44 ? L LYS 5 91 1 Y 1 P LYS 45 ? L LYS 6 92 1 Y 1 P SER 46 ? L SER 7 93 1 Y 1 P ALA 47 ? L ALA 8 94 1 Y 1 P ALA 48 ? L ALA 9 95 1 Y 1 P GLU 49 ? L GLU 10 96 1 Y 1 P SER 50 ? L SER 11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 GLN N N N N 47 GLN CA C N S 48 GLN C C N N 49 GLN O O N N 50 GLN CB C N N 51 GLN CG C N N 52 GLN CD C N N 53 GLN OE1 O N N 54 GLN NE2 N N N 55 GLN OXT O N N 56 GLN H H N N 57 GLN H2 H N N 58 GLN HA H N N 59 GLN HB2 H N N 60 GLN HB3 H N N 61 GLN HG2 H N N 62 GLN HG3 H N N 63 GLN HE21 H N N 64 GLN HE22 H N N 65 GLN HXT H N N 66 GLU N N N N 67 GLU CA C N S 68 GLU C C N N 69 GLU O O N N 70 GLU CB C N N 71 GLU CG C N N 72 GLU CD C N N 73 GLU OE1 O N N 74 GLU OE2 O N N 75 GLU OXT O N N 76 GLU H H N N 77 GLU H2 H N N 78 GLU HA H N N 79 GLU HB2 H N N 80 GLU HB3 H N N 81 GLU HG2 H N N 82 GLU HG3 H N N 83 GLU HE2 H N N 84 GLU HXT H N N 85 HIS N N N N 86 HIS CA C N S 87 HIS C C N N 88 HIS O O N N 89 HIS CB C N N 90 HIS CG C Y N 91 HIS ND1 N Y N 92 HIS CD2 C Y N 93 HIS CE1 C Y N 94 HIS NE2 N Y N 95 HIS OXT O N N 96 HIS H H N N 97 HIS H2 H N N 98 HIS HA H N N 99 HIS HB2 H N N 100 HIS HB3 H N N 101 HIS HD1 H N N 102 HIS HD2 H N N 103 HIS HE1 H N N 104 HIS HE2 H N N 105 HIS HXT H N N 106 ILE N N N N 107 ILE CA C N S 108 ILE C C N N 109 ILE O O N N 110 ILE CB C N S 111 ILE CG1 C N N 112 ILE CG2 C N N 113 ILE CD1 C N N 114 ILE OXT O N N 115 ILE H H N N 116 ILE H2 H N N 117 ILE HA H N N 118 ILE HB H N N 119 ILE HG12 H N N 120 ILE HG13 H N N 121 ILE HG21 H N N 122 ILE HG22 H N N 123 ILE HG23 H N N 124 ILE HD11 H N N 125 ILE HD12 H N N 126 ILE HD13 H N N 127 ILE HXT H N N 128 LEU N N N N 129 LEU CA C N S 130 LEU C C N N 131 LEU O O N N 132 LEU CB C N N 133 LEU CG C N N 134 LEU CD1 C N N 135 LEU CD2 C N N 136 LEU OXT O N N 137 LEU H H N N 138 LEU H2 H N N 139 LEU HA H N N 140 LEU HB2 H N N 141 LEU HB3 H N N 142 LEU HG H N N 143 LEU HD11 H N N 144 LEU HD12 H N N 145 LEU HD13 H N N 146 LEU HD21 H N N 147 LEU HD22 H N N 148 LEU HD23 H N N 149 LEU HXT H N N 150 LYS N N N N 151 LYS CA C N S 152 LYS C C N N 153 LYS O O N N 154 LYS CB C N N 155 LYS CG C N N 156 LYS CD C N N 157 LYS CE C N N 158 LYS NZ N N N 159 LYS OXT O N N 160 LYS H H N N 161 LYS H2 H N N 162 LYS HA H N N 163 LYS HB2 H N N 164 LYS HB3 H N N 165 LYS HG2 H N N 166 LYS HG3 H N N 167 LYS HD2 H N N 168 LYS HD3 H N N 169 LYS HE2 H N N 170 LYS HE3 H N N 171 LYS HZ1 H N N 172 LYS HZ2 H N N 173 LYS HZ3 H N N 174 LYS HXT H N N 175 MET N N N N 176 MET CA C N S 177 MET C C N N 178 MET O O N N 179 MET CB C N N 180 MET CG C N N 181 MET SD S N N 182 MET CE C N N 183 MET OXT O N N 184 MET H H N N 185 MET H2 H N N 186 MET HA H N N 187 MET HB2 H N N 188 MET HB3 H N N 189 MET HG2 H N N 190 MET HG3 H N N 191 MET HE1 H N N 192 MET HE2 H N N 193 MET HE3 H N N 194 MET HXT H N N 195 SER N N N N 196 SER CA C N S 197 SER C C N N 198 SER O O N N 199 SER CB C N N 200 SER OG O N N 201 SER OXT O N N 202 SER H H N N 203 SER H2 H N N 204 SER HA H N N 205 SER HB2 H N N 206 SER HB3 H N N 207 SER HG H N N 208 SER HXT H N N 209 TYR N N N N 210 TYR CA C N S 211 TYR C C N N 212 TYR O O N N 213 TYR CB C N N 214 TYR CG C Y N 215 TYR CD1 C Y N 216 TYR CD2 C Y N 217 TYR CE1 C Y N 218 TYR CE2 C Y N 219 TYR CZ C Y N 220 TYR OH O N N 221 TYR OXT O N N 222 TYR H H N N 223 TYR H2 H N N 224 TYR HA H N N 225 TYR HB2 H N N 226 TYR HB3 H N N 227 TYR HD1 H N N 228 TYR HD2 H N N 229 TYR HE1 H N N 230 TYR HE2 H N N 231 TYR HH H N N 232 TYR HXT H N N 233 VAL N N N N 234 VAL CA C N S 235 VAL C C N N 236 VAL O O N N 237 VAL CB C N N 238 VAL CG1 C N N 239 VAL CG2 C N N 240 VAL OXT O N N 241 VAL H H N N 242 VAL H2 H N N 243 VAL HA H N N 244 VAL HB H N N 245 VAL HG11 H N N 246 VAL HG12 H N N 247 VAL HG13 H N N 248 VAL HG21 H N N 249 VAL HG22 H N N 250 VAL HG23 H N N 251 VAL HXT H N N 252 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 GLN N CA sing N N 44 GLN N H sing N N 45 GLN N H2 sing N N 46 GLN CA C sing N N 47 GLN CA CB sing N N 48 GLN CA HA sing N N 49 GLN C O doub N N 50 GLN C OXT sing N N 51 GLN CB CG sing N N 52 GLN CB HB2 sing N N 53 GLN CB HB3 sing N N 54 GLN CG CD sing N N 55 GLN CG HG2 sing N N 56 GLN CG HG3 sing N N 57 GLN CD OE1 doub N N 58 GLN CD NE2 sing N N 59 GLN NE2 HE21 sing N N 60 GLN NE2 HE22 sing N N 61 GLN OXT HXT sing N N 62 GLU N CA sing N N 63 GLU N H sing N N 64 GLU N H2 sing N N 65 GLU CA C sing N N 66 GLU CA CB sing N N 67 GLU CA HA sing N N 68 GLU C O doub N N 69 GLU C OXT sing N N 70 GLU CB CG sing N N 71 GLU CB HB2 sing N N 72 GLU CB HB3 sing N N 73 GLU CG CD sing N N 74 GLU CG HG2 sing N N 75 GLU CG HG3 sing N N 76 GLU CD OE1 doub N N 77 GLU CD OE2 sing N N 78 GLU OE2 HE2 sing N N 79 GLU OXT HXT sing N N 80 HIS N CA sing N N 81 HIS N H sing N N 82 HIS N H2 sing N N 83 HIS CA C sing N N 84 HIS CA CB sing N N 85 HIS CA HA sing N N 86 HIS C O doub N N 87 HIS C OXT sing N N 88 HIS CB CG sing N N 89 HIS CB HB2 sing N N 90 HIS CB HB3 sing N N 91 HIS CG ND1 sing Y N 92 HIS CG CD2 doub Y N 93 HIS ND1 CE1 doub Y N 94 HIS ND1 HD1 sing N N 95 HIS CD2 NE2 sing Y N 96 HIS CD2 HD2 sing N N 97 HIS CE1 NE2 sing Y N 98 HIS CE1 HE1 sing N N 99 HIS NE2 HE2 sing N N 100 HIS OXT HXT sing N N 101 ILE N CA sing N N 102 ILE N H sing N N 103 ILE N H2 sing N N 104 ILE CA C sing N N 105 ILE CA CB sing N N 106 ILE CA HA sing N N 107 ILE C O doub N N 108 ILE C OXT sing N N 109 ILE CB CG1 sing N N 110 ILE CB CG2 sing N N 111 ILE CB HB sing N N 112 ILE CG1 CD1 sing N N 113 ILE CG1 HG12 sing N N 114 ILE CG1 HG13 sing N N 115 ILE CG2 HG21 sing N N 116 ILE CG2 HG22 sing N N 117 ILE CG2 HG23 sing N N 118 ILE CD1 HD11 sing N N 119 ILE CD1 HD12 sing N N 120 ILE CD1 HD13 sing N N 121 ILE OXT HXT sing N N 122 LEU N CA sing N N 123 LEU N H sing N N 124 LEU N H2 sing N N 125 LEU CA C sing N N 126 LEU CA CB sing N N 127 LEU CA HA sing N N 128 LEU C O doub N N 129 LEU C OXT sing N N 130 LEU CB CG sing N N 131 LEU CB HB2 sing N N 132 LEU CB HB3 sing N N 133 LEU CG CD1 sing N N 134 LEU CG CD2 sing N N 135 LEU CG HG sing N N 136 LEU CD1 HD11 sing N N 137 LEU CD1 HD12 sing N N 138 LEU CD1 HD13 sing N N 139 LEU CD2 HD21 sing N N 140 LEU CD2 HD22 sing N N 141 LEU CD2 HD23 sing N N 142 LEU OXT HXT sing N N 143 LYS N CA sing N N 144 LYS N H sing N N 145 LYS N H2 sing N N 146 LYS CA C sing N N 147 LYS CA CB sing N N 148 LYS CA HA sing N N 149 LYS C O doub N N 150 LYS C OXT sing N N 151 LYS CB CG sing N N 152 LYS CB HB2 sing N N 153 LYS CB HB3 sing N N 154 LYS CG CD sing N N 155 LYS CG HG2 sing N N 156 LYS CG HG3 sing N N 157 LYS CD CE sing N N 158 LYS CD HD2 sing N N 159 LYS CD HD3 sing N N 160 LYS CE NZ sing N N 161 LYS CE HE2 sing N N 162 LYS CE HE3 sing N N 163 LYS NZ HZ1 sing N N 164 LYS NZ HZ2 sing N N 165 LYS NZ HZ3 sing N N 166 LYS OXT HXT sing N N 167 MET N CA sing N N 168 MET N H sing N N 169 MET N H2 sing N N 170 MET CA C sing N N 171 MET CA CB sing N N 172 MET CA HA sing N N 173 MET C O doub N N 174 MET C OXT sing N N 175 MET CB CG sing N N 176 MET CB HB2 sing N N 177 MET CB HB3 sing N N 178 MET CG SD sing N N 179 MET CG HG2 sing N N 180 MET CG HG3 sing N N 181 MET SD CE sing N N 182 MET CE HE1 sing N N 183 MET CE HE2 sing N N 184 MET CE HE3 sing N N 185 MET OXT HXT sing N N 186 SER N CA sing N N 187 SER N H sing N N 188 SER N H2 sing N N 189 SER CA C sing N N 190 SER CA CB sing N N 191 SER CA HA sing N N 192 SER C O doub N N 193 SER C OXT sing N N 194 SER CB OG sing N N 195 SER CB HB2 sing N N 196 SER CB HB3 sing N N 197 SER OG HG sing N N 198 SER OXT HXT sing N N 199 TYR N CA sing N N 200 TYR N H sing N N 201 TYR N H2 sing N N 202 TYR CA C sing N N 203 TYR CA CB sing N N 204 TYR CA HA sing N N 205 TYR C O doub N N 206 TYR C OXT sing N N 207 TYR CB CG sing N N 208 TYR CB HB2 sing N N 209 TYR CB HB3 sing N N 210 TYR CG CD1 doub Y N 211 TYR CG CD2 sing Y N 212 TYR CD1 CE1 sing Y N 213 TYR CD1 HD1 sing N N 214 TYR CD2 CE2 doub Y N 215 TYR CD2 HD2 sing N N 216 TYR CE1 CZ doub Y N 217 TYR CE1 HE1 sing N N 218 TYR CE2 CZ sing Y N 219 TYR CE2 HE2 sing N N 220 TYR CZ OH sing N N 221 TYR OH HH sing N N 222 TYR OXT HXT sing N N 223 VAL N CA sing N N 224 VAL N H sing N N 225 VAL N H2 sing N N 226 VAL CA C sing N N 227 VAL CA CB sing N N 228 VAL CA HA sing N N 229 VAL C O doub N N 230 VAL C OXT sing N N 231 VAL CB CG1 sing N N 232 VAL CB CG2 sing N N 233 VAL CB HB sing N N 234 VAL CG1 HG11 sing N N 235 VAL CG1 HG12 sing N N 236 VAL CG1 HG13 sing N N 237 VAL CG2 HG21 sing N N 238 VAL CG2 HG22 sing N N 239 VAL CG2 HG23 sing N N 240 VAL OXT HXT sing N N 241 # _em_admin.current_status REL _em_admin.deposition_date 2024-10-24 _em_admin.deposition_site PDBJ _em_admin.entry_id 9K8S _em_admin.last_update 2025-10-29 _em_admin.map_release_date 2025-10-29 _em_admin.title 'Cryo-EM structure of HE30 polymorph 1' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 178.29 _em_helical_entity.axial_rise_per_subunit 4.66 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 55 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX ? 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? MASKING ? 4 ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9K8S _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #