data_9KAR # _entry.id 9KAR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KAR pdb_00009kar 10.2210/pdb9kar/pdb WWPDB D_1300053182 ? ? BMRB 36701 ? 10.13018/BMR36701 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-04-16 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 9KAR _pdbx_database_status.recvd_initial_deposition_date 2024-10-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of a new lasso peptide streptacidin' _pdbx_database_related.db_id 36701 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email huangjiwu@sioc.ac.cn _pdbx_contact_author.name_first Jiwu _pdbx_contact_author.name_last Huang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0009-0003-2746-5529 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huang, J.W.' 1 0009-0003-2746-5529 'Cao, C.Y.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Org.Biomol.Chem. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1477-0539 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 23 _citation.language ? _citation.page_first 1723 _citation.page_last 1730 _citation.title 'Genome mining and heterologous expression reveal streptacidin, a new lasso peptide from Streptacidiphilus jiangxiensis.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/d4ob01998a _citation.pdbx_database_id_PubMed 39807060 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, J.' 1 0009-0003-2746-5529 primary 'Cheng, B.' 2 0000-0002-2211-8478 primary 'Cao, C.' 3 0000-0001-7865-8249 primary 'Liu, W.' 4 0000-0003-2729-1787 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description GLY-GLY-TRP-GLY-THR-VAL-PRO-ASP-TRP-PHE-PHE-ASN-MET-ASN-TRP _entity.formula_weight 1813.986 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details '15-mer lasso peptide streptacidin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGWGTVPDWFFNMNW _entity_poly.pdbx_seq_one_letter_code_can GGWGTVPDWFFNMNW _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 TRP n 1 4 GLY n 1 5 THR n 1 6 VAL n 1 7 PRO n 1 8 ASP n 1 9 TRP n 1 10 PHE n 1 11 PHE n 1 12 ASN n 1 13 MET n 1 14 ASN n 1 15 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 15 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'CGMCC 4.1857' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptacidiphilus jiangxiensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 235985 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rossetta _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pCDFDuet-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 TRP 3 3 3 TRP TRP A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 TRP 15 15 15 TRP TRP A . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 2 2 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 3 3 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 4 4 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 5 5 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 6 6 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 7 7 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 8 8 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 9 9 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 10 10 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 11 11 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 12 12 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 13 13 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 14 14 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 15 15 Y 1 A ASP 8 ? OD2 ? A ASP 8 OD2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KAR _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 9KAR _struct.title 'Solution NMR structure of a new lasso peptide streptacidin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KAR _struct_keywords.text 'Lasso peptide, Topological structure, Solution NMR structure, RiPPs, ANTIBIOTIC' _struct_keywords.pdbx_keywords ANTIBIOTIC # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9KAR _struct_ref.pdbx_db_accession 9KAR _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9KAR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 15 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9KAR _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 15 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # _pdbx_entry_details.entry_id 9KAR _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N A GLY 1 ? ? CG A ASP 8 ? ? 1.29 2 1 H A GLY 2 ? ? O A ASN 12 ? ? 1.59 3 1 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 4 2 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 5 2 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 6 3 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 7 3 H A GLY 2 ? ? O A ASN 12 ? ? 1.60 8 3 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 9 4 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 10 4 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 11 5 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 12 5 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 13 6 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 14 6 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 15 7 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 16 7 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 17 8 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 18 8 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 19 9 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 20 9 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 21 10 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 22 10 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 23 11 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 24 11 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.18 25 12 N A GLY 1 ? ? CG A ASP 8 ? ? 1.29 26 12 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.18 27 13 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 28 13 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 29 14 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 30 14 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 31 15 N A GLY 1 ? ? CG A ASP 8 ? ? 1.30 32 15 H A GLY 2 ? ? O A ASN 12 ? ? 1.56 33 15 N A GLY 1 ? ? OD1 A ASP 8 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 3 ? ? 47.16 78.53 2 1 THR A 5 ? ? -155.82 -77.70 3 1 ASP A 8 ? ? -161.64 -158.95 4 1 PHE A 11 ? ? -147.54 -71.51 5 2 TRP A 3 ? ? 46.14 77.32 6 2 THR A 5 ? ? -153.91 -67.89 7 2 ASP A 8 ? ? -146.23 -154.13 8 2 PHE A 11 ? ? -155.11 -77.68 9 3 TRP A 3 ? ? 46.89 78.47 10 3 THR A 5 ? ? -155.11 -76.58 11 3 ASP A 8 ? ? -162.92 -162.59 12 3 PHE A 11 ? ? -148.66 -69.32 13 4 TRP A 3 ? ? 48.42 78.48 14 4 THR A 5 ? ? -153.82 -71.96 15 4 ASP A 8 ? ? -146.91 -153.02 16 4 PHE A 11 ? ? -146.01 -74.30 17 5 TRP A 3 ? ? 43.32 80.51 18 5 THR A 5 ? ? -154.08 -75.94 19 5 ASP A 8 ? ? -146.53 -157.37 20 5 PHE A 10 ? ? -75.55 -70.06 21 5 PHE A 11 ? ? -144.97 -78.17 22 6 TRP A 3 ? ? 49.32 76.53 23 6 THR A 5 ? ? -151.24 -77.10 24 6 PHE A 11 ? ? -145.99 -79.11 25 7 TRP A 3 ? ? 47.93 78.18 26 7 THR A 5 ? ? -152.62 -62.39 27 7 ASP A 8 ? ? -145.82 -151.79 28 7 PHE A 11 ? ? -145.08 -79.66 29 8 TRP A 3 ? ? 46.88 83.46 30 8 THR A 5 ? ? -151.96 -75.86 31 8 PHE A 11 ? ? -146.61 -76.68 32 9 TRP A 3 ? ? 40.92 89.30 33 9 THR A 5 ? ? -151.11 -78.54 34 9 ASP A 8 ? ? -145.29 -151.94 35 9 PHE A 11 ? ? -145.18 -77.44 36 10 TRP A 3 ? ? 47.70 76.98 37 10 THR A 5 ? ? -152.51 -75.01 38 10 PHE A 10 ? ? -76.64 -71.92 39 10 PHE A 11 ? ? -144.15 -70.21 40 11 TRP A 3 ? ? 45.32 83.37 41 11 THR A 5 ? ? -154.93 -82.29 42 11 ASP A 8 ? ? -160.01 -167.75 43 11 PHE A 11 ? ? -148.92 -73.28 44 12 TRP A 3 ? ? 43.68 83.12 45 12 THR A 5 ? ? -153.80 -72.74 46 12 PHE A 11 ? ? -149.49 -79.80 47 13 TRP A 3 ? ? 43.24 85.72 48 13 THR A 5 ? ? -152.99 -75.30 49 13 PHE A 11 ? ? -148.29 -68.86 50 14 TRP A 3 ? ? 47.10 81.67 51 14 THR A 5 ? ? -151.58 -71.99 52 14 PHE A 11 ? ? -148.07 -79.80 53 15 TRP A 3 ? ? 44.42 81.42 54 15 THR A 5 ? ? -155.23 -69.35 55 15 ASP A 8 ? ? -166.20 -167.85 56 15 PHE A 11 ? ? -148.60 -77.01 # _pdbx_nmr_ensemble.entry_id 9KAR _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 9KAR _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '30 mg/mL None streptacidin, DMSO' _pdbx_nmr_sample_details.solvent_system DMSO _pdbx_nmr_sample_details.label las_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component streptacidin _pdbx_nmr_exptl_sample.concentration 30 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mg/mL _pdbx_nmr_exptl_sample.isotopic_labeling None # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure 101k _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength na _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label las_condition _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.solution_id 1 _pdbx_nmr_exptl.type '2D NOESY' _pdbx_nmr_exptl.spectrometer_id 1 _pdbx_nmr_exptl.sample_state isotropic # _pdbx_nmr_refine.entry_id 9KAR _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' NMRFAM-SPARKY 1.470 'Woonghee Lee' 2 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 ASP N N N N 18 ASP CA C N S 19 ASP C C N N 20 ASP O O N N 21 ASP CB C N N 22 ASP CG C N N 23 ASP OD1 O N N 24 ASP OD2 O N N 25 ASP OXT O N N 26 ASP H H N N 27 ASP H2 H N N 28 ASP HA H N N 29 ASP HB2 H N N 30 ASP HB3 H N N 31 ASP HD2 H N N 32 ASP HXT H N N 33 GLY N N N N 34 GLY CA C N N 35 GLY C C N N 36 GLY O O N N 37 GLY OXT O N N 38 GLY H H N N 39 GLY H2 H N N 40 GLY HA2 H N N 41 GLY HA3 H N N 42 GLY HXT H N N 43 MET N N N N 44 MET CA C N S 45 MET C C N N 46 MET O O N N 47 MET CB C N N 48 MET CG C N N 49 MET SD S N N 50 MET CE C N N 51 MET OXT O N N 52 MET H H N N 53 MET H2 H N N 54 MET HA H N N 55 MET HB2 H N N 56 MET HB3 H N N 57 MET HG2 H N N 58 MET HG3 H N N 59 MET HE1 H N N 60 MET HE2 H N N 61 MET HE3 H N N 62 MET HXT H N N 63 PHE N N N N 64 PHE CA C N S 65 PHE C C N N 66 PHE O O N N 67 PHE CB C N N 68 PHE CG C Y N 69 PHE CD1 C Y N 70 PHE CD2 C Y N 71 PHE CE1 C Y N 72 PHE CE2 C Y N 73 PHE CZ C Y N 74 PHE OXT O N N 75 PHE H H N N 76 PHE H2 H N N 77 PHE HA H N N 78 PHE HB2 H N N 79 PHE HB3 H N N 80 PHE HD1 H N N 81 PHE HD2 H N N 82 PHE HE1 H N N 83 PHE HE2 H N N 84 PHE HZ H N N 85 PHE HXT H N N 86 PRO N N N N 87 PRO CA C N S 88 PRO C C N N 89 PRO O O N N 90 PRO CB C N N 91 PRO CG C N N 92 PRO CD C N N 93 PRO OXT O N N 94 PRO H H N N 95 PRO HA H N N 96 PRO HB2 H N N 97 PRO HB3 H N N 98 PRO HG2 H N N 99 PRO HG3 H N N 100 PRO HD2 H N N 101 PRO HD3 H N N 102 PRO HXT H N N 103 THR N N N N 104 THR CA C N S 105 THR C C N N 106 THR O O N N 107 THR CB C N R 108 THR OG1 O N N 109 THR CG2 C N N 110 THR OXT O N N 111 THR H H N N 112 THR H2 H N N 113 THR HA H N N 114 THR HB H N N 115 THR HG1 H N N 116 THR HG21 H N N 117 THR HG22 H N N 118 THR HG23 H N N 119 THR HXT H N N 120 TRP N N N N 121 TRP CA C N S 122 TRP C C N N 123 TRP O O N N 124 TRP CB C N N 125 TRP CG C Y N 126 TRP CD1 C Y N 127 TRP CD2 C Y N 128 TRP NE1 N Y N 129 TRP CE2 C Y N 130 TRP CE3 C Y N 131 TRP CZ2 C Y N 132 TRP CZ3 C Y N 133 TRP CH2 C Y N 134 TRP OXT O N N 135 TRP H H N N 136 TRP H2 H N N 137 TRP HA H N N 138 TRP HB2 H N N 139 TRP HB3 H N N 140 TRP HD1 H N N 141 TRP HE1 H N N 142 TRP HE3 H N N 143 TRP HZ2 H N N 144 TRP HZ3 H N N 145 TRP HH2 H N N 146 TRP HXT H N N 147 VAL N N N N 148 VAL CA C N S 149 VAL C C N N 150 VAL O O N N 151 VAL CB C N N 152 VAL CG1 C N N 153 VAL CG2 C N N 154 VAL OXT O N N 155 VAL H H N N 156 VAL H2 H N N 157 VAL HA H N N 158 VAL HB H N N 159 VAL HG11 H N N 160 VAL HG12 H N N 161 VAL HG13 H N N 162 VAL HG21 H N N 163 VAL HG22 H N N 164 VAL HG23 H N N 165 VAL HXT H N N 166 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 ASP N CA sing N N 17 ASP N H sing N N 18 ASP N H2 sing N N 19 ASP CA C sing N N 20 ASP CA CB sing N N 21 ASP CA HA sing N N 22 ASP C O doub N N 23 ASP C OXT sing N N 24 ASP CB CG sing N N 25 ASP CB HB2 sing N N 26 ASP CB HB3 sing N N 27 ASP CG OD1 doub N N 28 ASP CG OD2 sing N N 29 ASP OD2 HD2 sing N N 30 ASP OXT HXT sing N N 31 GLY N CA sing N N 32 GLY N H sing N N 33 GLY N H2 sing N N 34 GLY CA C sing N N 35 GLY CA HA2 sing N N 36 GLY CA HA3 sing N N 37 GLY C O doub N N 38 GLY C OXT sing N N 39 GLY OXT HXT sing N N 40 MET N CA sing N N 41 MET N H sing N N 42 MET N H2 sing N N 43 MET CA C sing N N 44 MET CA CB sing N N 45 MET CA HA sing N N 46 MET C O doub N N 47 MET C OXT sing N N 48 MET CB CG sing N N 49 MET CB HB2 sing N N 50 MET CB HB3 sing N N 51 MET CG SD sing N N 52 MET CG HG2 sing N N 53 MET CG HG3 sing N N 54 MET SD CE sing N N 55 MET CE HE1 sing N N 56 MET CE HE2 sing N N 57 MET CE HE3 sing N N 58 MET OXT HXT sing N N 59 PHE N CA sing N N 60 PHE N H sing N N 61 PHE N H2 sing N N 62 PHE CA C sing N N 63 PHE CA CB sing N N 64 PHE CA HA sing N N 65 PHE C O doub N N 66 PHE C OXT sing N N 67 PHE CB CG sing N N 68 PHE CB HB2 sing N N 69 PHE CB HB3 sing N N 70 PHE CG CD1 doub Y N 71 PHE CG CD2 sing Y N 72 PHE CD1 CE1 sing Y N 73 PHE CD1 HD1 sing N N 74 PHE CD2 CE2 doub Y N 75 PHE CD2 HD2 sing N N 76 PHE CE1 CZ doub Y N 77 PHE CE1 HE1 sing N N 78 PHE CE2 CZ sing Y N 79 PHE CE2 HE2 sing N N 80 PHE CZ HZ sing N N 81 PHE OXT HXT sing N N 82 PRO N CA sing N N 83 PRO N CD sing N N 84 PRO N H sing N N 85 PRO CA C sing N N 86 PRO CA CB sing N N 87 PRO CA HA sing N N 88 PRO C O doub N N 89 PRO C OXT sing N N 90 PRO CB CG sing N N 91 PRO CB HB2 sing N N 92 PRO CB HB3 sing N N 93 PRO CG CD sing N N 94 PRO CG HG2 sing N N 95 PRO CG HG3 sing N N 96 PRO CD HD2 sing N N 97 PRO CD HD3 sing N N 98 PRO OXT HXT sing N N 99 THR N CA sing N N 100 THR N H sing N N 101 THR N H2 sing N N 102 THR CA C sing N N 103 THR CA CB sing N N 104 THR CA HA sing N N 105 THR C O doub N N 106 THR C OXT sing N N 107 THR CB OG1 sing N N 108 THR CB CG2 sing N N 109 THR CB HB sing N N 110 THR OG1 HG1 sing N N 111 THR CG2 HG21 sing N N 112 THR CG2 HG22 sing N N 113 THR CG2 HG23 sing N N 114 THR OXT HXT sing N N 115 TRP N CA sing N N 116 TRP N H sing N N 117 TRP N H2 sing N N 118 TRP CA C sing N N 119 TRP CA CB sing N N 120 TRP CA HA sing N N 121 TRP C O doub N N 122 TRP C OXT sing N N 123 TRP CB CG sing N N 124 TRP CB HB2 sing N N 125 TRP CB HB3 sing N N 126 TRP CG CD1 doub Y N 127 TRP CG CD2 sing Y N 128 TRP CD1 NE1 sing Y N 129 TRP CD1 HD1 sing N N 130 TRP CD2 CE2 doub Y N 131 TRP CD2 CE3 sing Y N 132 TRP NE1 CE2 sing Y N 133 TRP NE1 HE1 sing N N 134 TRP CE2 CZ2 sing Y N 135 TRP CE3 CZ3 doub Y N 136 TRP CE3 HE3 sing N N 137 TRP CZ2 CH2 doub Y N 138 TRP CZ2 HZ2 sing N N 139 TRP CZ3 CH2 sing Y N 140 TRP CZ3 HZ3 sing N N 141 TRP CH2 HH2 sing N N 142 TRP OXT HXT sing N N 143 VAL N CA sing N N 144 VAL N H sing N N 145 VAL N H2 sing N N 146 VAL CA C sing N N 147 VAL CA CB sing N N 148 VAL CA HA sing N N 149 VAL C O doub N N 150 VAL C OXT sing N N 151 VAL CB CG1 sing N N 152 VAL CB CG2 sing N N 153 VAL CB HB sing N N 154 VAL CG1 HG11 sing N N 155 VAL CG1 HG12 sing N N 156 VAL CG1 HG13 sing N N 157 VAL CG2 HG21 sing N N 158 VAL CG2 HG22 sing N N 159 VAL CG2 HG23 sing N N 160 VAL OXT HXT sing N N 161 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 22407135 1 'National Natural Science Foundation of China (NSFC)' China 2022YFC2303100 2 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE NEO' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 9KAR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #