HEADER HYDROLASE 12-NOV-24 9KJE TITLE THE APO-MTREX1 CRYSTAL STRUCTURE FOR SOAKING EXPERIMENTS (SOAKING TITLE 2 CONDITION 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: THREE-PRIME REPAIR EXONUCLEASE 1; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: 3'-5' EXONUCLEASE TREX1; COMPND 5 EC: 3.1.11.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TREX1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TREX1, INHIBITOR, DEDDH EXONUCLEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.HSIAO,K.W.HUANG,C.Y.WU,C.Y.TSAI,M.T.WU REVDAT 1 28-JAN-26 9KJE 0 JRNL AUTH K.W.HUANG,C.YU TSAI,C.Y.WU,W.C.LIN,M.T.WU,K.C.HSU,C.YU YANG, JRNL AUTH 2 I.Y.CHANG,H.M.LIU,J.W.CHU,Y.Y.HSIAO JRNL TITL DISORDERED DNA-BINDING MOTIF FORMS A MODULATION SITE FOR JRNL TITL 2 INHIBITING THE CANCER IMMUNOTHERAPY TARGET TREX1. JRNL REF NUCLEIC ACIDS RES. V. 54 2026 JRNL REFN ESSN 1362-4962 JRNL PMID 41533589 JRNL DOI 10.1093/NAR/GKAF1511 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.420 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 109324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.700 REMARK 3 FREE R VALUE TEST SET COUNT : 8421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.6300 - 4.3400 0.99 3574 318 0.1487 0.1695 REMARK 3 2 4.3400 - 3.4500 0.99 3434 288 0.1297 0.1478 REMARK 3 3 3.4500 - 3.0100 0.99 3429 274 0.1529 0.1809 REMARK 3 4 3.0100 - 2.7400 1.00 3426 289 0.1553 0.1841 REMARK 3 5 2.7400 - 2.5400 1.00 3372 310 0.1448 0.1840 REMARK 3 6 2.5400 - 2.3900 1.00 3449 251 0.1387 0.1560 REMARK 3 7 2.3900 - 2.2700 1.00 3384 276 0.1317 0.1505 REMARK 3 8 2.2700 - 2.1700 1.00 3396 275 0.1308 0.1739 REMARK 3 9 2.1700 - 2.0900 1.00 3369 286 0.1320 0.1625 REMARK 3 10 2.0900 - 2.0200 1.00 3372 296 0.1342 0.1689 REMARK 3 11 2.0200 - 1.9600 1.00 3377 282 0.1371 0.1658 REMARK 3 12 1.9600 - 1.9000 1.00 3331 290 0.1334 0.1740 REMARK 3 13 1.9000 - 1.8500 1.00 3358 300 0.1400 0.1815 REMARK 3 14 1.8500 - 1.8000 1.00 3389 258 0.1418 0.1858 REMARK 3 15 1.8000 - 1.7600 1.00 3345 272 0.1310 0.1780 REMARK 3 16 1.7600 - 1.7300 1.00 3384 274 0.1319 0.1746 REMARK 3 17 1.7300 - 1.6900 1.00 3343 281 0.1368 0.1746 REMARK 3 18 1.6900 - 1.6600 1.00 3342 276 0.1357 0.1971 REMARK 3 19 1.6600 - 1.6300 1.00 3335 291 0.1332 0.1818 REMARK 3 20 1.6300 - 1.6000 1.00 3324 269 0.1423 0.1919 REMARK 3 21 1.6000 - 1.5800 1.00 3359 283 0.1521 0.2062 REMARK 3 22 1.5800 - 1.5500 1.00 3308 294 0.1645 0.1987 REMARK 3 23 1.5500 - 1.5300 0.99 3375 262 0.1722 0.2069 REMARK 3 24 1.5300 - 1.5100 0.99 3291 294 0.1856 0.2334 REMARK 3 25 1.5100 - 1.4900 0.99 3297 295 0.1973 0.2477 REMARK 3 26 1.4900 - 1.4700 1.00 3364 265 0.2120 0.2388 REMARK 3 27 1.4700 - 1.4500 0.99 3303 248 0.2333 0.2945 REMARK 3 28 1.4500 - 1.4300 0.99 3336 284 0.2537 0.2928 REMARK 3 29 1.4300 - 1.4200 0.99 3289 276 0.2654 0.3041 REMARK 3 30 1.4200 - 1.4000 0.98 3248 264 0.2809 0.2959 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3616 REMARK 3 ANGLE : 1.150 4941 REMARK 3 CHIRALITY : 0.087 566 REMARK 3 PLANARITY : 0.020 650 REMARK 3 DIHEDRAL : 5.978 497 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9KJE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1300051123. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 07A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110147 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.39300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M SODIUM ACETATE TRIHYDRATE PH7.0, REMARK 280 0.1M BIS-TRIS PROPANE PH7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.68100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.23950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.59300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.23950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.68100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.59300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -9 REMARK 465 GLY B -8 REMARK 465 SER B -7 REMARK 465 SER B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 SER B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 LEU B 4 REMARK 465 SER B 169 REMARK 465 GLY B 170 REMARK 465 ASN B 171 REMARK 465 GLY B 172 REMARK 465 SER B 173 REMARK 465 PRO B 236 REMARK 465 ALA B 237 REMARK 465 THR B 238 REMARK 465 THR B 239 REMARK 465 GLY B 240 REMARK 465 THR B 241 REMARK 465 THR B 242 REMARK 465 MET A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 LEU A 4 REMARK 465 VAL A 5 REMARK 465 PRO A 6 REMARK 465 ARG A 7 REMARK 465 GLY A 8 REMARK 465 SER A 9 REMARK 465 SER A 169 REMARK 465 GLY A 170 REMARK 465 ASN A 171 REMARK 465 GLY A 172 REMARK 465 SER A 173 REMARK 465 ARG A 174 REMARK 465 ALA A 237 REMARK 465 THR A 238 REMARK 465 THR A 239 REMARK 465 GLY A 240 REMARK 465 THR A 241 REMARK 465 THR A 242 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 99 O HOH A 406 1.52 REMARK 500 O HOH A 401 O HOH A 409 1.92 REMARK 500 OE1 GLN B 213 O HOH B 401 2.01 REMARK 500 O HOH B 612 O HOH B 622 2.04 REMARK 500 O ARG B 128 O HOH B 402 2.06 REMARK 500 O HOH B 406 O HOH B 555 2.07 REMARK 500 O HOH A 517 O HOH A 585 2.07 REMARK 500 O HOH A 464 O HOH A 587 2.07 REMARK 500 O ASP B 148 O HOH B 403 2.11 REMARK 500 O HOH A 401 O HOH A 439 2.11 REMARK 500 O HOH B 405 O HOH B 415 2.14 REMARK 500 O HOH B 472 O HOH B 595 2.14 REMARK 500 O HOH A 409 O HOH A 570 2.16 REMARK 500 O LEU B 141 O HOH B 404 2.18 REMARK 500 O HOH A 517 O HOH A 551 2.18 REMARK 500 O THR B 47 O HOH B 401 2.18 REMARK 500 O HOH B 408 O HOH B 503 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 604 O HOH A 567 3555 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 119 CB CYS B 119 SG -0.130 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 46 64.05 -101.88 REMARK 500 TYR B 129 -71.01 -127.29 REMARK 500 TYR A 129 -73.24 -138.06 REMARK 500 SER A 167 54.61 -118.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 174 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9KJD RELATED DB: PDB DBREF 9KJE B 11 242 UNP Q91XB0 TREX1_MOUSE 11 242 DBREF 9KJE A 11 242 UNP Q91XB0 TREX1_MOUSE 11 242 SEQADV 9KJE MET B -9 UNP Q91XB0 INITIATING METHIONINE SEQADV 9KJE GLY B -8 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER B -7 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER B -6 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B -5 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B -4 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B -3 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B -2 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B -1 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B 0 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER B 1 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER B 2 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE GLY B 3 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE LEU B 4 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE VAL B 5 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE PRO B 6 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE ARG B 7 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE GLY B 8 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER B 9 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS B 10 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE MET A -9 UNP Q91XB0 INITIATING METHIONINE SEQADV 9KJE GLY A -8 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER A -7 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER A -6 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A -5 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A -4 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A -3 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A -2 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A -1 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A 0 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER A 1 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER A 2 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE GLY A 3 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE LEU A 4 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE VAL A 5 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE PRO A 6 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE ARG A 7 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE GLY A 8 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE SER A 9 UNP Q91XB0 EXPRESSION TAG SEQADV 9KJE HIS A 10 UNP Q91XB0 EXPRESSION TAG SEQRES 1 B 252 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 252 LEU VAL PRO ARG GLY SER HIS MET GLN THR LEU ILE PHE SEQRES 3 B 252 LEU ASP LEU GLU ALA THR GLY LEU PRO SER SER ARG PRO SEQRES 4 B 252 GLU VAL THR GLU LEU CYS LEU LEU ALA VAL HIS ARG ARG SEQRES 5 B 252 ALA LEU GLU ASN THR SER ILE SER GLN GLY HIS PRO PRO SEQRES 6 B 252 PRO VAL PRO ARG PRO PRO ARG VAL VAL ASP LYS LEU SER SEQRES 7 B 252 LEU CYS ILE ALA PRO GLY LYS ALA CYS SER PRO GLY ALA SEQRES 8 B 252 SER GLU ILE THR GLY LEU SER LYS ALA GLU LEU GLU VAL SEQRES 9 B 252 GLN GLY ARG GLN ARG PHE ASP ASP ASN LEU ALA ILE LEU SEQRES 10 B 252 LEU ARG ALA PHE LEU GLN ARG GLN PRO GLN PRO CYS CYS SEQRES 11 B 252 LEU VAL ALA HIS ASN GLY ASP ARG TYR ASP PHE PRO LEU SEQRES 12 B 252 LEU GLN THR GLU LEU ALA ARG LEU SER THR PRO SER PRO SEQRES 13 B 252 LEU ASP GLY THR PHE CYS VAL ASP SER ILE ALA ALA LEU SEQRES 14 B 252 LYS ALA LEU GLU GLN ALA SER SER PRO SER GLY ASN GLY SEQRES 15 B 252 SER ARG LYS SER TYR SER LEU GLY SER ILE TYR THR ARG SEQRES 16 B 252 LEU TYR TRP GLN ALA PRO THR ASP SER HIS THR ALA GLU SEQRES 17 B 252 GLY ASP VAL LEU THR LEU LEU SER ILE CYS GLN TRP LYS SEQRES 18 B 252 PRO GLN ALA LEU LEU GLN TRP VAL ASP GLU HIS ALA ARG SEQRES 19 B 252 PRO PHE SER THR VAL LYS PRO MET TYR GLY THR PRO ALA SEQRES 20 B 252 THR THR GLY THR THR SEQRES 1 A 252 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 252 LEU VAL PRO ARG GLY SER HIS MET GLN THR LEU ILE PHE SEQRES 3 A 252 LEU ASP LEU GLU ALA THR GLY LEU PRO SER SER ARG PRO SEQRES 4 A 252 GLU VAL THR GLU LEU CYS LEU LEU ALA VAL HIS ARG ARG SEQRES 5 A 252 ALA LEU GLU ASN THR SER ILE SER GLN GLY HIS PRO PRO SEQRES 6 A 252 PRO VAL PRO ARG PRO PRO ARG VAL VAL ASP LYS LEU SER SEQRES 7 A 252 LEU CYS ILE ALA PRO GLY LYS ALA CYS SER PRO GLY ALA SEQRES 8 A 252 SER GLU ILE THR GLY LEU SER LYS ALA GLU LEU GLU VAL SEQRES 9 A 252 GLN GLY ARG GLN ARG PHE ASP ASP ASN LEU ALA ILE LEU SEQRES 10 A 252 LEU ARG ALA PHE LEU GLN ARG GLN PRO GLN PRO CYS CYS SEQRES 11 A 252 LEU VAL ALA HIS ASN GLY ASP ARG TYR ASP PHE PRO LEU SEQRES 12 A 252 LEU GLN THR GLU LEU ALA ARG LEU SER THR PRO SER PRO SEQRES 13 A 252 LEU ASP GLY THR PHE CYS VAL ASP SER ILE ALA ALA LEU SEQRES 14 A 252 LYS ALA LEU GLU GLN ALA SER SER PRO SER GLY ASN GLY SEQRES 15 A 252 SER ARG LYS SER TYR SER LEU GLY SER ILE TYR THR ARG SEQRES 16 A 252 LEU TYR TRP GLN ALA PRO THR ASP SER HIS THR ALA GLU SEQRES 17 A 252 GLY ASP VAL LEU THR LEU LEU SER ILE CYS GLN TRP LYS SEQRES 18 A 252 PRO GLN ALA LEU LEU GLN TRP VAL ASP GLU HIS ALA ARG SEQRES 19 A 252 PRO PHE SER THR VAL LYS PRO MET TYR GLY THR PRO ALA SEQRES 20 A 252 THR THR GLY THR THR HET ACT B 301 7 HET ACT B 302 7 HET ACT A 301 7 HET ACT A 302 7 HET ACT A 303 7 HETNAM ACT ACETATE ION FORMUL 3 ACT 5(C2 H3 O2 1-) FORMUL 8 HOH *461(H2 O) HELIX 1 AA1 LEU B 24 ARG B 28 5 5 HELIX 2 AA2 ARG B 41 ASN B 46 1 6 HELIX 3 AA3 SER B 78 GLY B 86 1 9 HELIX 4 AA4 SER B 88 GLN B 95 1 8 HELIX 5 AA5 ASP B 101 ARG B 114 1 14 HELIX 6 AA6 TYR B 129 ARG B 140 1 12 HELIX 7 AA7 SER B 155 SER B 167 1 13 HELIX 8 AA8 SER B 178 TRP B 188 1 11 HELIX 9 AA9 THR B 196 GLN B 209 1 14 HELIX 10 AB1 LYS B 211 ALA B 223 1 13 HELIX 11 AB2 SER B 227 VAL B 229 5 3 HELIX 12 AB3 LEU A 24 ARG A 28 5 5 HELIX 13 AB4 ARG A 41 ASN A 46 1 6 HELIX 14 AB5 SER A 78 GLY A 86 1 9 HELIX 15 AB6 SER A 88 GLN A 95 1 8 HELIX 16 AB7 ASP A 101 ARG A 114 1 14 HELIX 17 AB8 TYR A 129 ARG A 140 1 12 HELIX 18 AB9 SER A 155 SER A 167 1 13 HELIX 19 AC1 SER A 178 TRP A 188 1 11 HELIX 20 AC2 THR A 196 GLN A 209 1 14 HELIX 21 AC3 LYS A 211 ALA A 223 1 13 HELIX 22 AC4 SER A 227 VAL A 229 5 3 SHEET 1 AA112 ARG B 224 PRO B 225 0 SHEET 2 AA112 PHE B 151 ASP B 154 -1 N CYS B 152 O ARG B 224 SHEET 3 AA112 CYS B 119 ALA B 123 1 N LEU B 121 O PHE B 151 SHEET 4 AA112 THR B 13 ALA B 21 1 N LEU B 17 O VAL B 122 SHEET 5 AA112 VAL B 31 HIS B 40 -1 O LEU B 37 N PHE B 16 SHEET 6 AA112 ASP B 65 CYS B 70 -1 O LEU B 67 N LEU B 36 SHEET 7 AA112 ASP A 65 CYS A 70 -1 O LYS A 66 N SER B 68 SHEET 8 AA112 VAL A 31 HIS A 40 -1 N ALA A 38 O ASP A 65 SHEET 9 AA112 THR A 13 ALA A 21 -1 N LEU A 14 O VAL A 39 SHEET 10 AA112 CYS A 119 ALA A 123 1 O CYS A 120 N ILE A 15 SHEET 11 AA112 PHE A 151 ASP A 154 1 O PHE A 151 N CYS A 119 SHEET 12 AA112 ARG A 224 PRO A 225 -1 O ARG A 224 N CYS A 152 CISPEP 1 HIS B 53 PRO B 54 0 -7.09 CISPEP 2 GLN B 117 PRO B 118 0 0.66 CISPEP 3 HIS A 53 PRO A 54 0 1.22 CISPEP 4 GLN A 117 PRO A 118 0 -2.69 CRYST1 75.362 83.186 88.479 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013269 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012021 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011302 0.00000 CONECT 7037 7038 7039 7040 CONECT 7038 7037 CONECT 7039 7037 CONECT 7040 7037 7041 7042 7043 CONECT 7041 7040 CONECT 7042 7040 CONECT 7043 7040 CONECT 7044 7045 7046 7047 CONECT 7045 7044 CONECT 7046 7044 CONECT 7047 7044 7048 7049 7050 CONECT 7048 7047 CONECT 7049 7047 CONECT 7050 7047 CONECT 7051 7052 7053 7054 CONECT 7052 7051 CONECT 7053 7051 CONECT 7054 7051 7055 7056 7057 CONECT 7055 7054 CONECT 7056 7054 CONECT 7057 7054 CONECT 7058 7059 7060 7061 CONECT 7059 7058 CONECT 7060 7058 CONECT 7061 7058 7062 7063 7064 CONECT 7062 7061 CONECT 7063 7061 CONECT 7064 7061 CONECT 7065 7066 7067 7068 CONECT 7066 7065 CONECT 7067 7065 CONECT 7068 7065 7069 7070 7071 CONECT 7069 7068 CONECT 7070 7068 CONECT 7071 7068 MASTER 390 0 5 22 12 0 0 6 3934 2 35 40 END