data_9KLY # _entry.id 9KLY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9KLY pdb_00009kly 10.2210/pdb9kly/pdb WWPDB D_1300053824 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-11-05 ? 2 'Structure model' 1 1 2026-01-14 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.journal_volume' 3 2 'Structure model' '_citation.page_first' 4 2 'Structure model' '_citation.page_last' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9KLY _pdbx_database_status.recvd_initial_deposition_date 2024-11-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 3 _pdbx_contact_author.email xu_yong@gibh.ac.cn _pdbx_contact_author.name_first Yong _pdbx_contact_author.name_last Xu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3601-0246 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chen, Z.' 1 ? 'Zhang, C.' 2 ? 'Xu, H.' 3 ? 'Wu, X.' 4 ? 'Zhang, Y.' 5 ? 'Xu, Y.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Pharm Sin B' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-3835 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 6546 _citation.page_last 6570 _citation.title 'Key imidazolyl groups that induce phenylalanine flipping enhance the efficacy of oral BRD9 inhibitors for AML treatment.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.apsb.2025.08.006 _citation.pdbx_database_id_PubMed 41477332 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, Z.' 1 ? primary 'Zhang, C.' 2 ? primary 'Shen, H.' 3 ? primary 'Xu, H.' 4 ? primary 'Huang, Y.' 5 ? primary 'Dong, R.' 6 ? primary 'Tang, X.' 7 ? primary 'Chai, S.' 8 ? primary 'Li, J.' 9 ? primary 'Xu, J.' 10 ? primary 'Zhang, X.' 11 ? primary 'Zhang, Y.' 12 ? primary 'Wu, X.' 13 ? primary 'Xu, Y.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 9' 17433.268 1 ? ? ? 'BRD9_HUMAN, Q9H8M2, sequence from 111-133 and 240-259 are tags. MKKGHHHHHHENLYFQGGSLKLS(M111-S133) ERLLALKRSMSFMQDMDFSQ(E240-Q259)' 2 non-polymer syn '1-[1-[2,5-dimethoxy-4-[(1~{S})-1-oxidanylethyl]phenyl]indolizin-3-yl]ethanone' 339.385 1 ? ? ? ? 3 water nat water 18.015 21 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Rhabdomyosarcoma antigen MU-RMS-40.8' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKKGHHHHHHENLYFQGGSLKLSAENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKI VANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MKKGHHHHHHENLYFQGGSLKLSAENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKI VANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1-[1-[2,5-dimethoxy-4-[(1~{S})-1-oxidanylethyl]phenyl]indolizin-3-yl]ethanone' A1EHA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LYS n 1 4 GLY n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLU n 1 12 ASN n 1 13 LEU n 1 14 TYR n 1 15 PHE n 1 16 GLN n 1 17 GLY n 1 18 GLY n 1 19 SER n 1 20 LEU n 1 21 LYS n 1 22 LEU n 1 23 SER n 1 24 ALA n 1 25 GLU n 1 26 ASN n 1 27 GLU n 1 28 SER n 1 29 THR n 1 30 PRO n 1 31 ILE n 1 32 GLN n 1 33 GLN n 1 34 LEU n 1 35 LEU n 1 36 GLU n 1 37 HIS n 1 38 PHE n 1 39 LEU n 1 40 ARG n 1 41 GLN n 1 42 LEU n 1 43 GLN n 1 44 ARG n 1 45 LYS n 1 46 ASP n 1 47 PRO n 1 48 HIS n 1 49 GLY n 1 50 PHE n 1 51 PHE n 1 52 ALA n 1 53 PHE n 1 54 PRO n 1 55 VAL n 1 56 THR n 1 57 ASP n 1 58 ALA n 1 59 ILE n 1 60 ALA n 1 61 PRO n 1 62 GLY n 1 63 TYR n 1 64 SER n 1 65 MET n 1 66 ILE n 1 67 ILE n 1 68 LYS n 1 69 HIS n 1 70 PRO n 1 71 MET n 1 72 ASP n 1 73 PHE n 1 74 GLY n 1 75 THR n 1 76 MET n 1 77 LYS n 1 78 ASP n 1 79 LYS n 1 80 ILE n 1 81 VAL n 1 82 ALA n 1 83 ASN n 1 84 GLU n 1 85 TYR n 1 86 LYS n 1 87 SER n 1 88 VAL n 1 89 THR n 1 90 GLU n 1 91 PHE n 1 92 LYS n 1 93 ALA n 1 94 ASP n 1 95 PHE n 1 96 LYS n 1 97 LEU n 1 98 MET n 1 99 CYS n 1 100 ASP n 1 101 ASN n 1 102 ALA n 1 103 MET n 1 104 THR n 1 105 TYR n 1 106 ASN n 1 107 ARG n 1 108 PRO n 1 109 ASP n 1 110 THR n 1 111 VAL n 1 112 TYR n 1 113 TYR n 1 114 LYS n 1 115 LEU n 1 116 ALA n 1 117 LYS n 1 118 LYS n 1 119 ILE n 1 120 LEU n 1 121 HIS n 1 122 ALA n 1 123 GLY n 1 124 PHE n 1 125 LYS n 1 126 MET n 1 127 MET n 1 128 SER n 1 129 LYS n 1 130 GLU n 1 131 ARG n 1 132 LEU n 1 133 LEU n 1 134 ALA n 1 135 LEU n 1 136 LYS n 1 137 ARG n 1 138 SER n 1 139 MET n 1 140 SER n 1 141 PHE n 1 142 MET n 1 143 GLN n 1 144 ASP n 1 145 MET n 1 146 ASP n 1 147 PHE n 1 148 SER n 1 149 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 149 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD9, UNQ3040/PRO9856' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1EHA non-polymer . '1-[1-[2,5-dimethoxy-4-[(1~{S})-1-oxidanylethyl]phenyl]indolizin-3-yl]ethanone' ? 'C20 H21 N O4' 339.385 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 111 ? ? ? A . n A 1 2 LYS 2 112 ? ? ? A . n A 1 3 LYS 3 113 ? ? ? A . n A 1 4 GLY 4 114 ? ? ? A . n A 1 5 HIS 5 115 ? ? ? A . n A 1 6 HIS 6 116 ? ? ? A . n A 1 7 HIS 7 117 ? ? ? A . n A 1 8 HIS 8 118 ? ? ? A . n A 1 9 HIS 9 119 ? ? ? A . n A 1 10 HIS 10 120 ? ? ? A . n A 1 11 GLU 11 121 ? ? ? A . n A 1 12 ASN 12 122 ? ? ? A . n A 1 13 LEU 13 123 ? ? ? A . n A 1 14 TYR 14 124 ? ? ? A . n A 1 15 PHE 15 125 ? ? ? A . n A 1 16 GLN 16 126 ? ? ? A . n A 1 17 GLY 17 127 ? ? ? A . n A 1 18 GLY 18 128 ? ? ? A . n A 1 19 SER 19 129 ? ? ? A . n A 1 20 LEU 20 130 ? ? ? A . n A 1 21 LYS 21 131 ? ? ? A . n A 1 22 LEU 22 132 ? ? ? A . n A 1 23 SER 23 133 ? ? ? A . n A 1 24 ALA 24 134 ? ? ? A . n A 1 25 GLU 25 135 ? ? ? A . n A 1 26 ASN 26 136 ? ? ? A . n A 1 27 GLU 27 137 137 GLU GLU A . n A 1 28 SER 28 138 138 SER SER A . n A 1 29 THR 29 139 139 THR THR A . n A 1 30 PRO 30 140 140 PRO PRO A . n A 1 31 ILE 31 141 141 ILE ILE A . n A 1 32 GLN 32 142 142 GLN GLN A . n A 1 33 GLN 33 143 143 GLN GLN A . n A 1 34 LEU 34 144 144 LEU LEU A . n A 1 35 LEU 35 145 145 LEU LEU A . n A 1 36 GLU 36 146 146 GLU GLU A . n A 1 37 HIS 37 147 147 HIS HIS A . n A 1 38 PHE 38 148 148 PHE PHE A . n A 1 39 LEU 39 149 149 LEU LEU A . n A 1 40 ARG 40 150 150 ARG ARG A . n A 1 41 GLN 41 151 151 GLN GLN A . n A 1 42 LEU 42 152 152 LEU LEU A . n A 1 43 GLN 43 153 153 GLN GLN A . n A 1 44 ARG 44 154 154 ARG ARG A . n A 1 45 LYS 45 155 155 LYS LYS A . n A 1 46 ASP 46 156 156 ASP ASP A . n A 1 47 PRO 47 157 157 PRO PRO A . n A 1 48 HIS 48 158 158 HIS HIS A . n A 1 49 GLY 49 159 159 GLY GLY A . n A 1 50 PHE 50 160 160 PHE PHE A . n A 1 51 PHE 51 161 161 PHE PHE A . n A 1 52 ALA 52 162 162 ALA ALA A . n A 1 53 PHE 53 163 163 PHE PHE A . n A 1 54 PRO 54 164 164 PRO PRO A . n A 1 55 VAL 55 165 165 VAL VAL A . n A 1 56 THR 56 166 166 THR THR A . n A 1 57 ASP 57 167 167 ASP ASP A . n A 1 58 ALA 58 168 168 ALA ALA A . n A 1 59 ILE 59 169 169 ILE ILE A . n A 1 60 ALA 60 170 170 ALA ALA A . n A 1 61 PRO 61 171 171 PRO PRO A . n A 1 62 GLY 62 172 172 GLY GLY A . n A 1 63 TYR 63 173 173 TYR TYR A . n A 1 64 SER 64 174 174 SER SER A . n A 1 65 MET 65 175 175 MET MET A . n A 1 66 ILE 66 176 176 ILE ILE A . n A 1 67 ILE 67 177 177 ILE ILE A . n A 1 68 LYS 68 178 178 LYS LYS A . n A 1 69 HIS 69 179 179 HIS HIS A . n A 1 70 PRO 70 180 180 PRO PRO A . n A 1 71 MET 71 181 181 MET MET A . n A 1 72 ASP 72 182 182 ASP ASP A . n A 1 73 PHE 73 183 183 PHE PHE A . n A 1 74 GLY 74 184 184 GLY GLY A . n A 1 75 THR 75 185 185 THR THR A . n A 1 76 MET 76 186 186 MET MET A . n A 1 77 LYS 77 187 187 LYS LYS A . n A 1 78 ASP 78 188 188 ASP ASP A . n A 1 79 LYS 79 189 189 LYS LYS A . n A 1 80 ILE 80 190 190 ILE ILE A . n A 1 81 VAL 81 191 191 VAL VAL A . n A 1 82 ALA 82 192 192 ALA ALA A . n A 1 83 ASN 83 193 193 ASN ASN A . n A 1 84 GLU 84 194 194 GLU GLU A . n A 1 85 TYR 85 195 195 TYR TYR A . n A 1 86 LYS 86 196 196 LYS LYS A . n A 1 87 SER 87 197 197 SER SER A . n A 1 88 VAL 88 198 198 VAL VAL A . n A 1 89 THR 89 199 199 THR THR A . n A 1 90 GLU 90 200 200 GLU GLU A . n A 1 91 PHE 91 201 201 PHE PHE A . n A 1 92 LYS 92 202 202 LYS LYS A . n A 1 93 ALA 93 203 203 ALA ALA A . n A 1 94 ASP 94 204 204 ASP ASP A . n A 1 95 PHE 95 205 205 PHE PHE A . n A 1 96 LYS 96 206 206 LYS LYS A . n A 1 97 LEU 97 207 207 LEU LEU A . n A 1 98 MET 98 208 208 MET MET A . n A 1 99 CYS 99 209 209 CYS CYS A . n A 1 100 ASP 100 210 210 ASP ASP A . n A 1 101 ASN 101 211 211 ASN ASN A . n A 1 102 ALA 102 212 212 ALA ALA A . n A 1 103 MET 103 213 213 MET MET A . n A 1 104 THR 104 214 214 THR THR A . n A 1 105 TYR 105 215 215 TYR TYR A . n A 1 106 ASN 106 216 216 ASN ASN A . n A 1 107 ARG 107 217 217 ARG ARG A . n A 1 108 PRO 108 218 218 PRO PRO A . n A 1 109 ASP 109 219 219 ASP ASP A . n A 1 110 THR 110 220 220 THR THR A . n A 1 111 VAL 111 221 221 VAL VAL A . n A 1 112 TYR 112 222 222 TYR TYR A . n A 1 113 TYR 113 223 223 TYR TYR A . n A 1 114 LYS 114 224 224 LYS LYS A . n A 1 115 LEU 115 225 225 LEU LEU A . n A 1 116 ALA 116 226 226 ALA ALA A . n A 1 117 LYS 117 227 227 LYS LYS A . n A 1 118 LYS 118 228 228 LYS LYS A . n A 1 119 ILE 119 229 229 ILE ILE A . n A 1 120 LEU 120 230 230 LEU LEU A . n A 1 121 HIS 121 231 231 HIS HIS A . n A 1 122 ALA 122 232 232 ALA ALA A . n A 1 123 GLY 123 233 233 GLY GLY A . n A 1 124 PHE 124 234 234 PHE PHE A . n A 1 125 LYS 125 235 235 LYS LYS A . n A 1 126 MET 126 236 236 MET MET A . n A 1 127 MET 127 237 237 MET MET A . n A 1 128 SER 128 238 238 SER SER A . n A 1 129 LYS 129 239 239 LYS LYS A . n A 1 130 GLU 130 240 240 GLU GLU A . n A 1 131 ARG 131 241 241 ARG ARG A . n A 1 132 LEU 132 242 242 LEU LEU A . n A 1 133 LEU 133 243 243 LEU LEU A . n A 1 134 ALA 134 244 244 ALA ALA A . n A 1 135 LEU 135 245 245 LEU LEU A . n A 1 136 LYS 136 246 246 LYS LYS A . n A 1 137 ARG 137 247 247 ARG ARG A . n A 1 138 SER 138 248 248 SER SER A . n A 1 139 MET 139 249 249 MET MET A . n A 1 140 SER 140 250 250 SER SER A . n A 1 141 PHE 141 251 ? ? ? A . n A 1 142 MET 142 252 ? ? ? A . n A 1 143 GLN 143 253 ? ? ? A . n A 1 144 ASP 144 254 ? ? ? A . n A 1 145 MET 145 255 ? ? ? A . n A 1 146 ASP 146 256 ? ? ? A . n A 1 147 PHE 147 257 ? ? ? A . n A 1 148 SER 148 258 ? ? ? A . n A 1 149 GLN 149 259 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1EHA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1EHA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1EHA 1 301 301 A1EHA DRG A . C 3 HOH 1 401 7 HOH HOH A . C 3 HOH 2 402 9 HOH HOH A . C 3 HOH 3 403 3 HOH HOH A . C 3 HOH 4 404 11 HOH HOH A . C 3 HOH 5 405 15 HOH HOH A . C 3 HOH 6 406 17 HOH HOH A . C 3 HOH 7 407 8 HOH HOH A . C 3 HOH 8 408 20 HOH HOH A . C 3 HOH 9 409 1 HOH HOH A . C 3 HOH 10 410 10 HOH HOH A . C 3 HOH 11 411 5 HOH HOH A . C 3 HOH 12 412 4 HOH HOH A . C 3 HOH 13 413 12 HOH HOH A . C 3 HOH 14 414 21 HOH HOH A . C 3 HOH 15 415 19 HOH HOH A . C 3 HOH 16 416 2 HOH HOH A . C 3 HOH 17 417 18 HOH HOH A . C 3 HOH 18 418 16 HOH HOH A . C 3 HOH 19 419 14 HOH HOH A . C 3 HOH 20 420 6 HOH HOH A . C 3 HOH 21 421 13 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9KLY _cell.details ? _cell.formula_units_Z ? _cell.length_a 43.959 _cell.length_a_esd ? _cell.length_b 51.056 _cell.length_b_esd ? _cell.length_c 64.369 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9KLY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9KLY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Sodium malonate pH 7.0, 20% w/v Polyethylene glycol 3,350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277 # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-12-26 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL02U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL02U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9KLY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 51.06 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7195 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 88.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.049 _reflns.pdbx_Rpim_I_all 0.024 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 27123 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.22 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all 2214 _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 647 _reflns_shell.percent_possible_obs 91.8 _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs 10.3 _reflns_shell.pdbx_Rrim_I_all 0.111 _reflns_shell.pdbx_Rpim_I_all 0.055 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.990 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.095 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -1.54 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 3.15 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -1.61 _refine.B_iso_max ? _refine.B_iso_mean 35.246 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9KLY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.15 _refine.ls_d_res_low 40.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6816 _refine.ls_number_reflns_R_free 364 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 86.41 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19187 _refine.ls_R_factor_R_free 0.22743 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19006 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.252 _refine.pdbx_overall_ESU_R_Free 0.197 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.568 _refine.overall_SU_ML 0.120 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 40.00 _refine_hist.number_atoms_solvent 21 _refine_hist.number_atoms_total 974 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 928 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.019 977 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 933 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.474 2.003 1312 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.920 3.006 2166 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.239 5.000 113 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.459 23.415 41 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.199 15.000 185 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.948 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.076 0.200 137 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.021 1043 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 202 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.075 3.262 455 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.069 3.252 454 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.237 4.863 567 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.235 4.876 568 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.799 3.670 522 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.796 3.668 523 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.623 5.306 746 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.988 36.396 1101 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.996 36.349 1097 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.150 _refine_ls_shell.d_res_low 2.206 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_R_work 509 _refine_ls_shell.percent_reflns_obs 89.75 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.212 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.224 # _struct.entry_id 9KLY _struct.title 'Crystal Structure of the bromodomain of human BRD9 in complex with the inhibitor Y22032' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9KLY _struct_keywords.text 'BRD9, bromodomain, inhibitor, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD9_HUMAN _struct_ref.pdbx_db_accession Q9H8M2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAM TYNRPDTVYYKLAKKILHAGFKMMSK ; _struct_ref.pdbx_align_begin 134 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9KLY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9H8M2 _struct_ref_seq.db_align_beg 134 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 239 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 134 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9KLY MET A 1 ? UNP Q9H8M2 ? ? 'initiating methionine' 111 1 1 9KLY LYS A 2 ? UNP Q9H8M2 ? ? 'expression tag' 112 2 1 9KLY LYS A 3 ? UNP Q9H8M2 ? ? 'expression tag' 113 3 1 9KLY GLY A 4 ? UNP Q9H8M2 ? ? 'expression tag' 114 4 1 9KLY HIS A 5 ? UNP Q9H8M2 ? ? 'expression tag' 115 5 1 9KLY HIS A 6 ? UNP Q9H8M2 ? ? 'expression tag' 116 6 1 9KLY HIS A 7 ? UNP Q9H8M2 ? ? 'expression tag' 117 7 1 9KLY HIS A 8 ? UNP Q9H8M2 ? ? 'expression tag' 118 8 1 9KLY HIS A 9 ? UNP Q9H8M2 ? ? 'expression tag' 119 9 1 9KLY HIS A 10 ? UNP Q9H8M2 ? ? 'expression tag' 120 10 1 9KLY GLU A 11 ? UNP Q9H8M2 ? ? 'expression tag' 121 11 1 9KLY ASN A 12 ? UNP Q9H8M2 ? ? 'expression tag' 122 12 1 9KLY LEU A 13 ? UNP Q9H8M2 ? ? 'expression tag' 123 13 1 9KLY TYR A 14 ? UNP Q9H8M2 ? ? 'expression tag' 124 14 1 9KLY PHE A 15 ? UNP Q9H8M2 ? ? 'expression tag' 125 15 1 9KLY GLN A 16 ? UNP Q9H8M2 ? ? 'expression tag' 126 16 1 9KLY GLY A 17 ? UNP Q9H8M2 ? ? 'expression tag' 127 17 1 9KLY GLY A 18 ? UNP Q9H8M2 ? ? 'expression tag' 128 18 1 9KLY SER A 19 ? UNP Q9H8M2 ? ? 'expression tag' 129 19 1 9KLY LEU A 20 ? UNP Q9H8M2 ? ? 'expression tag' 130 20 1 9KLY LYS A 21 ? UNP Q9H8M2 ? ? 'expression tag' 131 21 1 9KLY LEU A 22 ? UNP Q9H8M2 ? ? 'expression tag' 132 22 1 9KLY SER A 23 ? UNP Q9H8M2 ? ? 'expression tag' 133 23 1 9KLY GLU A 130 ? UNP Q9H8M2 ? ? 'expression tag' 240 24 1 9KLY ARG A 131 ? UNP Q9H8M2 ? ? 'expression tag' 241 25 1 9KLY LEU A 132 ? UNP Q9H8M2 ? ? 'expression tag' 242 26 1 9KLY LEU A 133 ? UNP Q9H8M2 ? ? 'expression tag' 243 27 1 9KLY ALA A 134 ? UNP Q9H8M2 ? ? 'expression tag' 244 28 1 9KLY LEU A 135 ? UNP Q9H8M2 ? ? 'expression tag' 245 29 1 9KLY LYS A 136 ? UNP Q9H8M2 ? ? 'expression tag' 246 30 1 9KLY ARG A 137 ? UNP Q9H8M2 ? ? 'expression tag' 247 31 1 9KLY SER A 138 ? UNP Q9H8M2 ? ? 'expression tag' 248 32 1 9KLY MET A 139 ? UNP Q9H8M2 ? ? 'expression tag' 249 33 1 9KLY SER A 140 ? UNP Q9H8M2 ? ? 'expression tag' 250 34 1 9KLY PHE A 141 ? UNP Q9H8M2 ? ? 'expression tag' 251 35 1 9KLY MET A 142 ? UNP Q9H8M2 ? ? 'expression tag' 252 36 1 9KLY GLN A 143 ? UNP Q9H8M2 ? ? 'expression tag' 253 37 1 9KLY ASP A 144 ? UNP Q9H8M2 ? ? 'expression tag' 254 38 1 9KLY MET A 145 ? UNP Q9H8M2 ? ? 'expression tag' 255 39 1 9KLY ASP A 146 ? UNP Q9H8M2 ? ? 'expression tag' 256 40 1 9KLY PHE A 147 ? UNP Q9H8M2 ? ? 'expression tag' 257 41 1 9KLY SER A 148 ? UNP Q9H8M2 ? ? 'expression tag' 258 42 1 9KLY GLN A 149 ? UNP Q9H8M2 ? ? 'expression tag' 259 43 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 29 ? ARG A 44 ? THR A 139 ARG A 154 1 ? 16 HELX_P HELX_P2 AA2 GLY A 62 ? ILE A 67 ? GLY A 172 ILE A 177 1 ? 6 HELX_P HELX_P3 AA3 ASP A 72 ? ALA A 82 ? ASP A 182 ALA A 192 1 ? 11 HELX_P HELX_P4 AA4 SER A 87 ? ASN A 106 ? SER A 197 ASN A 216 1 ? 20 HELX_P HELX_P5 AA5 THR A 110 ? MET A 127 ? THR A 220 MET A 237 1 ? 18 HELX_P HELX_P6 AA6 SER A 128 ? SER A 140 ? SER A 238 SER A 250 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 9KLY _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 249 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -64.05 _pdbx_validate_torsion.psi -72.63 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 111 ? A MET 1 2 1 Y 1 A LYS 112 ? A LYS 2 3 1 Y 1 A LYS 113 ? A LYS 3 4 1 Y 1 A GLY 114 ? A GLY 4 5 1 Y 1 A HIS 115 ? A HIS 5 6 1 Y 1 A HIS 116 ? A HIS 6 7 1 Y 1 A HIS 117 ? A HIS 7 8 1 Y 1 A HIS 118 ? A HIS 8 9 1 Y 1 A HIS 119 ? A HIS 9 10 1 Y 1 A HIS 120 ? A HIS 10 11 1 Y 1 A GLU 121 ? A GLU 11 12 1 Y 1 A ASN 122 ? A ASN 12 13 1 Y 1 A LEU 123 ? A LEU 13 14 1 Y 1 A TYR 124 ? A TYR 14 15 1 Y 1 A PHE 125 ? A PHE 15 16 1 Y 1 A GLN 126 ? A GLN 16 17 1 Y 1 A GLY 127 ? A GLY 17 18 1 Y 1 A GLY 128 ? A GLY 18 19 1 Y 1 A SER 129 ? A SER 19 20 1 Y 1 A LEU 130 ? A LEU 20 21 1 Y 1 A LYS 131 ? A LYS 21 22 1 Y 1 A LEU 132 ? A LEU 22 23 1 Y 1 A SER 133 ? A SER 23 24 1 Y 1 A ALA 134 ? A ALA 24 25 1 Y 1 A GLU 135 ? A GLU 25 26 1 Y 1 A ASN 136 ? A ASN 26 27 1 Y 1 A PHE 251 ? A PHE 141 28 1 Y 1 A MET 252 ? A MET 142 29 1 Y 1 A GLN 253 ? A GLN 143 30 1 Y 1 A ASP 254 ? A ASP 144 31 1 Y 1 A MET 255 ? A MET 145 32 1 Y 1 A ASP 256 ? A ASP 146 33 1 Y 1 A PHE 257 ? A PHE 147 34 1 Y 1 A SER 258 ? A SER 148 35 1 Y 1 A GLN 259 ? A GLN 149 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1EHA CAL C N N 1 A1EHA CAJ C N N 2 A1EHA OAK O N N 3 A1EHA CAG C Y N 4 A1EHA CAH C Y N 5 A1EHA NAE N Y N 6 A1EHA CAD C Y N 7 A1EHA CAC C Y N 8 A1EHA CAB C Y N 9 A1EHA CAA C Y N 10 A1EHA CAF C Y N 11 A1EHA CAI C Y N 12 A1EHA CAM C Y N 13 A1EHA CAR C Y N 14 A1EHA CAQ C Y N 15 A1EHA OAV O N N 16 A1EHA CAW C N N 17 A1EHA CAP C Y N 18 A1EHA CAS C N S 19 A1EHA CAT C N N 20 A1EHA OAU O N N 21 A1EHA CAO C Y N 22 A1EHA CAN C Y N 23 A1EHA OAX O N N 24 A1EHA CAY C N N 25 A1EHA H1 H N N 26 A1EHA H2 H N N 27 A1EHA H3 H N N 28 A1EHA H4 H N N 29 A1EHA H5 H N N 30 A1EHA H6 H N N 31 A1EHA H7 H N N 32 A1EHA H8 H N N 33 A1EHA H9 H N N 34 A1EHA H10 H N N 35 A1EHA H11 H N N 36 A1EHA H12 H N N 37 A1EHA H13 H N N 38 A1EHA H14 H N N 39 A1EHA H15 H N N 40 A1EHA H16 H N N 41 A1EHA H17 H N N 42 A1EHA H18 H N N 43 A1EHA H19 H N N 44 A1EHA H20 H N N 45 A1EHA H21 H N N 46 ALA N N N N 47 ALA CA C N S 48 ALA C C N N 49 ALA O O N N 50 ALA CB C N N 51 ALA OXT O N N 52 ALA H H N N 53 ALA H2 H N N 54 ALA HA H N N 55 ALA HB1 H N N 56 ALA HB2 H N N 57 ALA HB3 H N N 58 ALA HXT H N N 59 ARG N N N N 60 ARG CA C N S 61 ARG C C N N 62 ARG O O N N 63 ARG CB C N N 64 ARG CG C N N 65 ARG CD C N N 66 ARG NE N N N 67 ARG CZ C N N 68 ARG NH1 N N N 69 ARG NH2 N N N 70 ARG OXT O N N 71 ARG H H N N 72 ARG H2 H N N 73 ARG HA H N N 74 ARG HB2 H N N 75 ARG HB3 H N N 76 ARG HG2 H N N 77 ARG HG3 H N N 78 ARG HD2 H N N 79 ARG HD3 H N N 80 ARG HE H N N 81 ARG HH11 H N N 82 ARG HH12 H N N 83 ARG HH21 H N N 84 ARG HH22 H N N 85 ARG HXT H N N 86 ASN N N N N 87 ASN CA C N S 88 ASN C C N N 89 ASN O O N N 90 ASN CB C N N 91 ASN CG C N N 92 ASN OD1 O N N 93 ASN ND2 N N N 94 ASN OXT O N N 95 ASN H H N N 96 ASN H2 H N N 97 ASN HA H N N 98 ASN HB2 H N N 99 ASN HB3 H N N 100 ASN HD21 H N N 101 ASN HD22 H N N 102 ASN HXT H N N 103 ASP N N N N 104 ASP CA C N S 105 ASP C C N N 106 ASP O O N N 107 ASP CB C N N 108 ASP CG C N N 109 ASP OD1 O N N 110 ASP OD2 O N N 111 ASP OXT O N N 112 ASP H H N N 113 ASP H2 H N N 114 ASP HA H N N 115 ASP HB2 H N N 116 ASP HB3 H N N 117 ASP HD2 H N N 118 ASP HXT H N N 119 CYS N N N N 120 CYS CA C N R 121 CYS C C N N 122 CYS O O N N 123 CYS CB C N N 124 CYS SG S N N 125 CYS OXT O N N 126 CYS H H N N 127 CYS H2 H N N 128 CYS HA H N N 129 CYS HB2 H N N 130 CYS HB3 H N N 131 CYS HG H N N 132 CYS HXT H N N 133 GLN N N N N 134 GLN CA C N S 135 GLN C C N N 136 GLN O O N N 137 GLN CB C N N 138 GLN CG C N N 139 GLN CD C N N 140 GLN OE1 O N N 141 GLN NE2 N N N 142 GLN OXT O N N 143 GLN H H N N 144 GLN H2 H N N 145 GLN HA H N N 146 GLN HB2 H N N 147 GLN HB3 H N N 148 GLN HG2 H N N 149 GLN HG3 H N N 150 GLN HE21 H N N 151 GLN HE22 H N N 152 GLN HXT H N N 153 GLU N N N N 154 GLU CA C N S 155 GLU C C N N 156 GLU O O N N 157 GLU CB C N N 158 GLU CG C N N 159 GLU CD C N N 160 GLU OE1 O N N 161 GLU OE2 O N N 162 GLU OXT O N N 163 GLU H H N N 164 GLU H2 H N N 165 GLU HA H N N 166 GLU HB2 H N N 167 GLU HB3 H N N 168 GLU HG2 H N N 169 GLU HG3 H N N 170 GLU HE2 H N N 171 GLU HXT H N N 172 GLY N N N N 173 GLY CA C N N 174 GLY C C N N 175 GLY O O N N 176 GLY OXT O N N 177 GLY H H N N 178 GLY H2 H N N 179 GLY HA2 H N N 180 GLY HA3 H N N 181 GLY HXT H N N 182 HIS N N N N 183 HIS CA C N S 184 HIS C C N N 185 HIS O O N N 186 HIS CB C N N 187 HIS CG C Y N 188 HIS ND1 N Y N 189 HIS CD2 C Y N 190 HIS CE1 C Y N 191 HIS NE2 N Y N 192 HIS OXT O N N 193 HIS H H N N 194 HIS H2 H N N 195 HIS HA H N N 196 HIS HB2 H N N 197 HIS HB3 H N N 198 HIS HD1 H N N 199 HIS HD2 H N N 200 HIS HE1 H N N 201 HIS HE2 H N N 202 HIS HXT H N N 203 HOH O O N N 204 HOH H1 H N N 205 HOH H2 H N N 206 ILE N N N N 207 ILE CA C N S 208 ILE C C N N 209 ILE O O N N 210 ILE CB C N S 211 ILE CG1 C N N 212 ILE CG2 C N N 213 ILE CD1 C N N 214 ILE OXT O N N 215 ILE H H N N 216 ILE H2 H N N 217 ILE HA H N N 218 ILE HB H N N 219 ILE HG12 H N N 220 ILE HG13 H N N 221 ILE HG21 H N N 222 ILE HG22 H N N 223 ILE HG23 H N N 224 ILE HD11 H N N 225 ILE HD12 H N N 226 ILE HD13 H N N 227 ILE HXT H N N 228 LEU N N N N 229 LEU CA C N S 230 LEU C C N N 231 LEU O O N N 232 LEU CB C N N 233 LEU CG C N N 234 LEU CD1 C N N 235 LEU CD2 C N N 236 LEU OXT O N N 237 LEU H H N N 238 LEU H2 H N N 239 LEU HA H N N 240 LEU HB2 H N N 241 LEU HB3 H N N 242 LEU HG H N N 243 LEU HD11 H N N 244 LEU HD12 H N N 245 LEU HD13 H N N 246 LEU HD21 H N N 247 LEU HD22 H N N 248 LEU HD23 H N N 249 LEU HXT H N N 250 LYS N N N N 251 LYS CA C N S 252 LYS C C N N 253 LYS O O N N 254 LYS CB C N N 255 LYS CG C N N 256 LYS CD C N N 257 LYS CE C N N 258 LYS NZ N N N 259 LYS OXT O N N 260 LYS H H N N 261 LYS H2 H N N 262 LYS HA H N N 263 LYS HB2 H N N 264 LYS HB3 H N N 265 LYS HG2 H N N 266 LYS HG3 H N N 267 LYS HD2 H N N 268 LYS HD3 H N N 269 LYS HE2 H N N 270 LYS HE3 H N N 271 LYS HZ1 H N N 272 LYS HZ2 H N N 273 LYS HZ3 H N N 274 LYS HXT H N N 275 MET N N N N 276 MET CA C N S 277 MET C C N N 278 MET O O N N 279 MET CB C N N 280 MET CG C N N 281 MET SD S N N 282 MET CE C N N 283 MET OXT O N N 284 MET H H N N 285 MET H2 H N N 286 MET HA H N N 287 MET HB2 H N N 288 MET HB3 H N N 289 MET HG2 H N N 290 MET HG3 H N N 291 MET HE1 H N N 292 MET HE2 H N N 293 MET HE3 H N N 294 MET HXT H N N 295 PHE N N N N 296 PHE CA C N S 297 PHE C C N N 298 PHE O O N N 299 PHE CB C N N 300 PHE CG C Y N 301 PHE CD1 C Y N 302 PHE CD2 C Y N 303 PHE CE1 C Y N 304 PHE CE2 C Y N 305 PHE CZ C Y N 306 PHE OXT O N N 307 PHE H H N N 308 PHE H2 H N N 309 PHE HA H N N 310 PHE HB2 H N N 311 PHE HB3 H N N 312 PHE HD1 H N N 313 PHE HD2 H N N 314 PHE HE1 H N N 315 PHE HE2 H N N 316 PHE HZ H N N 317 PHE HXT H N N 318 PRO N N N N 319 PRO CA C N S 320 PRO C C N N 321 PRO O O N N 322 PRO CB C N N 323 PRO CG C N N 324 PRO CD C N N 325 PRO OXT O N N 326 PRO H H N N 327 PRO HA H N N 328 PRO HB2 H N N 329 PRO HB3 H N N 330 PRO HG2 H N N 331 PRO HG3 H N N 332 PRO HD2 H N N 333 PRO HD3 H N N 334 PRO HXT H N N 335 SER N N N N 336 SER CA C N S 337 SER C C N N 338 SER O O N N 339 SER CB C N N 340 SER OG O N N 341 SER OXT O N N 342 SER H H N N 343 SER H2 H N N 344 SER HA H N N 345 SER HB2 H N N 346 SER HB3 H N N 347 SER HG H N N 348 SER HXT H N N 349 THR N N N N 350 THR CA C N S 351 THR C C N N 352 THR O O N N 353 THR CB C N R 354 THR OG1 O N N 355 THR CG2 C N N 356 THR OXT O N N 357 THR H H N N 358 THR H2 H N N 359 THR HA H N N 360 THR HB H N N 361 THR HG1 H N N 362 THR HG21 H N N 363 THR HG22 H N N 364 THR HG23 H N N 365 THR HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EHA CAC CAB sing Y N 1 A1EHA CAC CAD doub Y N 2 A1EHA CAB CAA doub Y N 3 A1EHA CAD NAE sing Y N 4 A1EHA CAA CAF sing Y N 5 A1EHA NAE CAF sing Y N 6 A1EHA NAE CAG sing Y N 7 A1EHA CAW OAV sing N N 8 A1EHA CAF CAI doub Y N 9 A1EHA OAK CAJ doub N N 10 A1EHA CAG CAJ sing N N 11 A1EHA CAG CAH doub Y N 12 A1EHA CAJ CAL sing N N 13 A1EHA OAV CAQ sing N N 14 A1EHA CAR CAQ doub Y N 15 A1EHA CAR CAM sing Y N 16 A1EHA CAI CAH sing Y N 17 A1EHA CAI CAM sing N N 18 A1EHA CAQ CAP sing Y N 19 A1EHA CAM CAN doub Y N 20 A1EHA CAP CAS sing N N 21 A1EHA CAP CAO doub Y N 22 A1EHA CAN CAO sing Y N 23 A1EHA CAN OAX sing N N 24 A1EHA CAS CAT sing N N 25 A1EHA CAS OAU sing N N 26 A1EHA CAY OAX sing N N 27 A1EHA CAL H1 sing N N 28 A1EHA CAL H2 sing N N 29 A1EHA CAL H3 sing N N 30 A1EHA CAH H4 sing N N 31 A1EHA CAD H5 sing N N 32 A1EHA CAC H6 sing N N 33 A1EHA CAB H7 sing N N 34 A1EHA CAA H8 sing N N 35 A1EHA CAR H9 sing N N 36 A1EHA CAW H10 sing N N 37 A1EHA CAW H11 sing N N 38 A1EHA CAW H12 sing N N 39 A1EHA CAS H13 sing N N 40 A1EHA CAT H14 sing N N 41 A1EHA CAT H15 sing N N 42 A1EHA CAT H16 sing N N 43 A1EHA OAU H17 sing N N 44 A1EHA CAO H18 sing N N 45 A1EHA CAY H19 sing N N 46 A1EHA CAY H20 sing N N 47 A1EHA CAY H21 sing N N 48 ALA N CA sing N N 49 ALA N H sing N N 50 ALA N H2 sing N N 51 ALA CA C sing N N 52 ALA CA CB sing N N 53 ALA CA HA sing N N 54 ALA C O doub N N 55 ALA C OXT sing N N 56 ALA CB HB1 sing N N 57 ALA CB HB2 sing N N 58 ALA CB HB3 sing N N 59 ALA OXT HXT sing N N 60 ARG N CA sing N N 61 ARG N H sing N N 62 ARG N H2 sing N N 63 ARG CA C sing N N 64 ARG CA CB sing N N 65 ARG CA HA sing N N 66 ARG C O doub N N 67 ARG C OXT sing N N 68 ARG CB CG sing N N 69 ARG CB HB2 sing N N 70 ARG CB HB3 sing N N 71 ARG CG CD sing N N 72 ARG CG HG2 sing N N 73 ARG CG HG3 sing N N 74 ARG CD NE sing N N 75 ARG CD HD2 sing N N 76 ARG CD HD3 sing N N 77 ARG NE CZ sing N N 78 ARG NE HE sing N N 79 ARG CZ NH1 sing N N 80 ARG CZ NH2 doub N N 81 ARG NH1 HH11 sing N N 82 ARG NH1 HH12 sing N N 83 ARG NH2 HH21 sing N N 84 ARG NH2 HH22 sing N N 85 ARG OXT HXT sing N N 86 ASN N CA sing N N 87 ASN N H sing N N 88 ASN N H2 sing N N 89 ASN CA C sing N N 90 ASN CA CB sing N N 91 ASN CA HA sing N N 92 ASN C O doub N N 93 ASN C OXT sing N N 94 ASN CB CG sing N N 95 ASN CB HB2 sing N N 96 ASN CB HB3 sing N N 97 ASN CG OD1 doub N N 98 ASN CG ND2 sing N N 99 ASN ND2 HD21 sing N N 100 ASN ND2 HD22 sing N N 101 ASN OXT HXT sing N N 102 ASP N CA sing N N 103 ASP N H sing N N 104 ASP N H2 sing N N 105 ASP CA C sing N N 106 ASP CA CB sing N N 107 ASP CA HA sing N N 108 ASP C O doub N N 109 ASP C OXT sing N N 110 ASP CB CG sing N N 111 ASP CB HB2 sing N N 112 ASP CB HB3 sing N N 113 ASP CG OD1 doub N N 114 ASP CG OD2 sing N N 115 ASP OD2 HD2 sing N N 116 ASP OXT HXT sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TYR N CA sing N N 354 TYR N H sing N N 355 TYR N H2 sing N N 356 TYR CA C sing N N 357 TYR CA CB sing N N 358 TYR CA HA sing N N 359 TYR C O doub N N 360 TYR C OXT sing N N 361 TYR CB CG sing N N 362 TYR CB HB2 sing N N 363 TYR CB HB3 sing N N 364 TYR CG CD1 doub Y N 365 TYR CG CD2 sing Y N 366 TYR CD1 CE1 sing Y N 367 TYR CD1 HD1 sing N N 368 TYR CD2 CE2 doub Y N 369 TYR CD2 HD2 sing N N 370 TYR CE1 CZ doub Y N 371 TYR CE1 HE1 sing N N 372 TYR CE2 CZ sing Y N 373 TYR CE2 HE2 sing N N 374 TYR CZ OH sing N N 375 TYR OH HH sing N N 376 TYR OXT HXT sing N N 377 VAL N CA sing N N 378 VAL N H sing N N 379 VAL N H2 sing N N 380 VAL CA C sing N N 381 VAL CA CB sing N N 382 VAL CA HA sing N N 383 VAL C O doub N N 384 VAL C OXT sing N N 385 VAL CB CG1 sing N N 386 VAL CB CG2 sing N N 387 VAL CB HB sing N N 388 VAL CG1 HG11 sing N N 389 VAL CG1 HG12 sing N N 390 VAL CG1 HG13 sing N N 391 VAL CG2 HG21 sing N N 392 VAL CG2 HG22 sing N N 393 VAL CG2 HG23 sing N N 394 VAL OXT HXT sing N N 395 # _pdbx_audit_support.funding_organization 'Ministry of Science and Technology (MoST, China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 2022YFE0210600 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6v1b _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9KLY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.022748 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019586 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015535 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #