HEADER LIGASE 09-DEC-24 9KZ1 TITLE CRYSTAL STRUCTURE OF PLYSB FROM A CHIMEOLYSIN CLYR COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLMURAMOYL-L-ALANINE AMIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.5.1.28; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PHAGE PHILP081102; SOURCE 3 ORGANISM_TAXID: 1860178; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHIMEOLYSIN, CLYR, PLYSB, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR F.HU REVDAT 1 22-OCT-25 9KZ1 0 JRNL AUTH F.HU,X.ZHANG,Z.GONG,P.WU,Q.ZHAO,Y.ZHENG,H.GAO,S.H.CHOU,X.LI, JRNL AUTH 2 M.ZHONG,Z.ZHAO,N.SHI,H.WEI,J.HE,H.YANG JRNL TITL DOMAIN INTERACTIONS IN A CHIMERIC DUAL-DOMAIN LYSIN LEAD TO JRNL TITL 2 BROAD BACTERICIDAL ACTIVITY. JRNL REF J.MOL.BIOL. V. 437 69373 2025 JRNL REFN ESSN 1089-8638 JRNL PMID 40769489 JRNL DOI 10.1016/J.JMB.2025.169373 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 15215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8900 - 2.4600 0.98 3044 161 0.1566 0.1870 REMARK 3 2 2.4600 - 1.9500 0.88 2642 139 0.1595 0.1904 REMARK 3 3 1.9500 - 1.7100 1.00 2965 156 0.1622 0.2081 REMARK 3 4 1.7100 - 1.5500 1.00 2948 155 0.1874 0.1967 REMARK 3 5 1.5500 - 1.4400 0.97 2855 150 0.2799 0.3122 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9050 -17.0524 0.7126 REMARK 3 T TENSOR REMARK 3 T11: 0.1164 T22: 0.1174 REMARK 3 T33: 0.1310 T12: 0.0055 REMARK 3 T13: 0.0053 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.6444 L22: 2.3117 REMARK 3 L33: 2.7851 L12: -0.4713 REMARK 3 L13: 2.4684 L23: -1.4116 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: -0.2168 S13: -0.0521 REMARK 3 S21: 0.2352 S22: 0.0325 S23: -0.0920 REMARK 3 S31: -0.0944 S32: -0.1396 S33: -0.1442 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0264 -6.2288 -10.7712 REMARK 3 T TENSOR REMARK 3 T11: 0.0839 T22: 0.0958 REMARK 3 T33: 0.0908 T12: -0.0068 REMARK 3 T13: -0.0245 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 7.1067 L22: 4.1340 REMARK 3 L33: 2.2869 L12: -2.2098 REMARK 3 L13: -2.8533 L23: 0.3711 REMARK 3 S TENSOR REMARK 3 S11: 0.1438 S12: 0.1987 S13: 0.4967 REMARK 3 S21: -0.2496 S22: -0.0611 S23: -0.0496 REMARK 3 S31: -0.0488 S32: 0.0104 S33: -0.0820 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0594 -8.7725 -8.8684 REMARK 3 T TENSOR REMARK 3 T11: 0.1600 T22: 0.2113 REMARK 3 T33: 0.1791 T12: -0.0043 REMARK 3 T13: 0.0103 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 3.4404 L22: 4.1963 REMARK 3 L33: 5.5276 L12: -0.0901 REMARK 3 L13: 1.7098 L23: 4.0364 REMARK 3 S TENSOR REMARK 3 S11: 0.0569 S12: 0.3366 S13: 0.1419 REMARK 3 S21: -0.5770 S22: 0.3353 S23: -0.6233 REMARK 3 S31: -0.6921 S32: 0.8324 S33: -0.3148 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9863 -9.7468 -15.3450 REMARK 3 T TENSOR REMARK 3 T11: 0.1284 T22: 0.1137 REMARK 3 T33: 0.1005 T12: -0.0133 REMARK 3 T13: 0.0160 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 2.7773 L22: 4.4456 REMARK 3 L33: 6.1358 L12: 2.5429 REMARK 3 L13: -2.7837 L23: 0.1289 REMARK 3 S TENSOR REMARK 3 S11: -0.1508 S12: 0.3940 S13: 0.0075 REMARK 3 S21: -0.4570 S22: 0.2068 S23: 0.0083 REMARK 3 S31: -0.1858 S32: -0.0758 S33: -0.1071 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1410 -14.1776 -9.6928 REMARK 3 T TENSOR REMARK 3 T11: 0.0791 T22: 0.1193 REMARK 3 T33: 0.1094 T12: -0.0011 REMARK 3 T13: -0.0123 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 6.7355 L22: 8.0480 REMARK 3 L33: 5.7135 L12: -2.2866 REMARK 3 L13: 3.1038 L23: -4.8874 REMARK 3 S TENSOR REMARK 3 S11: 0.1862 S12: 0.2299 S13: 0.0644 REMARK 3 S21: -0.2126 S22: -0.1445 S23: 0.3810 REMARK 3 S31: 0.2307 S32: 0.0992 S33: 0.0643 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2221 -10.4693 2.1283 REMARK 3 T TENSOR REMARK 3 T11: 0.1439 T22: 0.1111 REMARK 3 T33: 0.0937 T12: 0.0069 REMARK 3 T13: -0.0192 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.7912 L22: 8.3938 REMARK 3 L33: 1.0556 L12: 2.5397 REMARK 3 L13: 1.3576 L23: 0.6119 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: -0.0547 S13: -0.0406 REMARK 3 S21: 0.2792 S22: 0.1344 S23: -0.5321 REMARK 3 S31: 0.0301 S32: 0.1668 S33: -0.0311 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 212 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5594 -13.9003 -5.4673 REMARK 3 T TENSOR REMARK 3 T11: 0.0724 T22: 0.0947 REMARK 3 T33: 0.1043 T12: 0.0119 REMARK 3 T13: -0.0058 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.5429 L22: 6.4354 REMARK 3 L33: 4.3078 L12: -0.8461 REMARK 3 L13: -0.4281 L23: 2.5220 REMARK 3 S TENSOR REMARK 3 S11: 0.0149 S12: 0.1953 S13: -0.1331 REMARK 3 S21: 0.0417 S22: -0.0065 S23: -0.2503 REMARK 3 S31: 0.3374 S32: 0.1105 S33: -0.0070 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 233 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5704 -4.9798 8.2834 REMARK 3 T TENSOR REMARK 3 T11: 0.2680 T22: 0.1562 REMARK 3 T33: 0.1499 T12: 0.0338 REMARK 3 T13: -0.0040 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 2.0267 L22: 2.2262 REMARK 3 L33: 2.1370 L12: -1.6008 REMARK 3 L13: -1.6808 L23: 2.1755 REMARK 3 S TENSOR REMARK 3 S11: -0.0487 S12: -0.2289 S13: 0.0887 REMARK 3 S21: 0.8782 S22: 0.1436 S23: -0.0689 REMARK 3 S31: 0.1004 S32: -0.2394 S33: -0.2472 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.7353 -8.6584 -1.5929 REMARK 3 T TENSOR REMARK 3 T11: 0.1388 T22: 0.1559 REMARK 3 T33: 0.0990 T12: -0.0230 REMARK 3 T13: 0.0183 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 8.8933 L22: 8.5239 REMARK 3 L33: 5.5148 L12: 4.4997 REMARK 3 L13: 1.2506 L23: 1.7144 REMARK 3 S TENSOR REMARK 3 S11: 0.1091 S12: -0.4960 S13: 0.1276 REMARK 3 S21: 0.3948 S22: -0.3249 S23: 0.3678 REMARK 3 S31: 0.5253 S32: -0.0998 S33: 0.1807 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9KZ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1300054564. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15215 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 37.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 5D74 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, 20% W/V POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.44350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 19.44350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.70500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.89250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.70500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.89250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.44350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.70500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.89250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 19.44350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.70500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.89250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 344 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 375 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 389 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 147 REMARK 465 PRO A 148 REMARK 465 GLY A 149 REMARK 465 THR A 150 REMARK 465 VAL A 151 REMARK 465 ALA A 152 REMARK 465 GLN A 153 REMARK 465 SER A 154 REMARK 465 ALA A 155 REMARK 465 PRO A 156 REMARK 465 ASN A 157 REMARK 465 LEU A 158 REMARK 465 ALA A 159 REMARK 465 GLY A 160 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 339 O HOH A 362 2.11 REMARK 500 O HOH A 382 O HOH A 387 2.14 REMARK 500 O HOH A 367 O HOH A 377 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 358 O HOH A 386 6444 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 166 124.91 -171.58 REMARK 500 REMARK 500 REMARK: NULL DBREF1 9KZ1 A 147 245 UNP A0A1X9I5F2_9CAUD DBREF2 9KZ1 A A0A1X9I5F2 147 245 SEQRES 1 A 99 PRO PRO GLY THR VAL ALA GLN SER ALA PRO ASN LEU ALA SEQRES 2 A 99 GLY SER ARG SER TYR ARG GLU THR GLY THR MET THR VAL SEQRES 3 A 99 THR VAL ASP ALA LEU ASN VAL ARG ARG ALA PRO ASN THR SEQRES 4 A 99 SER GLY GLU ILE VAL ALA VAL TYR LYS ARG GLY GLU SER SEQRES 5 A 99 PHE ASP TYR ASP THR VAL ILE ILE ASP VAL ASN GLY TYR SEQRES 6 A 99 VAL TRP VAL SER TYR ILE GLY GLY SER GLY LYS ARG ASN SEQRES 7 A 99 TYR VAL ALA THR GLY ALA THR LYS ASP GLY LYS ARG PHE SEQRES 8 A 99 GLY ASN ALA TRP GLY THR PHE LYS FORMUL 2 HOH *110(H2 O) SHEET 1 AA1 4 ILE A 189 LYS A 194 0 SHEET 2 AA1 4 ALA A 176 ARG A 180 -1 N VAL A 179 O ALA A 191 SHEET 3 AA1 4 ARG A 223 LYS A 232 -1 O TYR A 225 N ARG A 180 SHEET 4 AA1 4 LYS A 235 PHE A 237 -1 O LYS A 235 N LYS A 232 SHEET 1 AA2 7 ILE A 189 LYS A 194 0 SHEET 2 AA2 7 ALA A 176 ARG A 180 -1 N VAL A 179 O ALA A 191 SHEET 3 AA2 7 ARG A 223 LYS A 232 -1 O TYR A 225 N ARG A 180 SHEET 4 AA2 7 TYR A 211 ILE A 217 -1 N TYR A 216 O ASN A 224 SHEET 5 AA2 7 SER A 198 ILE A 206 -1 N ILE A 205 O TRP A 213 SHEET 6 AA2 7 ARG A 162 VAL A 172 -1 N ARG A 162 O ILE A 206 SHEET 7 AA2 7 GLY A 242 PHE A 244 -1 O THR A 243 N THR A 171 CRYST1 57.410 75.785 38.887 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017419 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013195 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025716 0.00000 MASTER 428 0 0 0 11 0 0 6 770 1 0 8 END