data_9L8M # _entry.id 9L8M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9L8M pdb_00009l8m 10.2210/pdb9l8m/pdb WWPDB D_1300055006 ? ? EMDB EMD-62886 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-01-21 ? 2 'EM metadata' 1 0 2026-01-21 ? 3 FSC 1 0 2026-01-21 ? 4 'Half map' 1 0 2026-01-21 1 5 'Half map' 1 0 2026-01-21 2 6 Image 1 0 2026-01-21 ? 7 Mask 1 0 2026-01-21 1 8 'Primary map' 1 0 2026-01-21 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9L8M _pdbx_database_status.recvd_initial_deposition_date 2024-12-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of SID-1 in complex with dsRNA' _pdbx_database_related.db_id EMD-62886 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email nureki@bs.s.u-tokyo.ac.jp _pdbx_contact_author.name_first Osamu _pdbx_contact_author.name_last Nureki _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1813-7008 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kumazaki, K.' 1 0009-0002-0979-5973 'Kusakizako, T.' 2 0000-0002-6186-6647 'Nishizawa, T.' 3 0000-0001-7463-8398 'Nureki, O.' 4 0000-0003-1813-7008 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural insights into SID1-mediated dsRNA uptake: A self-organizing endocytic mechanism' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Takai, A.' 1 ? primary 'Kumazaki, K.' 2 ? primary 'Awazu, T.' 3 ? primary 'Kambara, T.' 4 ? primary 'Murakoshi, S.' 5 ? primary 'Kato, T.' 6 ? primary 'Hiraizumi, M.' 7 ? primary 'Kise, Y.' 8 ? primary 'Kusakizako, T.' 9 ? primary 'Nishizawa, T.' 10 ? primary 'Okada, T.' 11 ? primary 'Nureki, O.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Systemic RNA interference defective protein 1' 86199.133 1 ? ? ? ? 2 polymer syn 'RNA (24-mer)' 3576.306 1 ? ? ? ? 3 polymer syn 'RNA (24-mer)' 3322.866 1 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 7 non-polymer syn 'CHOLESTEROL HEMISUCCINATE' 486.726 1 ? ? ? ? 8 non-polymer syn 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 760.076 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Systemic RNAi enabling protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLRLELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVT VSNGRDSFLLKLPTVYPNLKLYTDGKLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQY DFLKFKTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDRSVISDKTHNRRVLSF TKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPI VINIIKNSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQV KIPLKQDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAI FIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPS PAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSA FHLNQIATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLG FFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF ; ;GPQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLRLELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVT VSNGRDSFLLKLPTVYPNLKLYTDGKLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQY DFLKFKTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDRSVISDKTHNRRVLSF TKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPI VINIIKNSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQV KIPLKQDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAI FIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPS PAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSA FHLNQIATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLG FFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF ; A ? 2 polyribonucleotide no no AAAAAAAAAAA AAAAAAAAAAA C ? 3 polyribonucleotide no no UUUUUUUUUUU UUUUUUUUUUU D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 'ZINC ION' ZN 7 'CHOLESTEROL HEMISUCCINATE' Y01 8 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine LBN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLN n 1 4 ASN n 1 5 ASN n 1 6 SER n 1 7 THR n 1 8 THR n 1 9 PRO n 1 10 SER n 1 11 PRO n 1 12 ILE n 1 13 ILE n 1 14 THR n 1 15 SER n 1 16 SER n 1 17 ASN n 1 18 SER n 1 19 SER n 1 20 VAL n 1 21 LEU n 1 22 VAL n 1 23 PHE n 1 24 GLU n 1 25 ILE n 1 26 SER n 1 27 SER n 1 28 LYS n 1 29 MET n 1 30 LYS n 1 31 MET n 1 32 ILE n 1 33 GLU n 1 34 LYS n 1 35 LYS n 1 36 LEU n 1 37 GLU n 1 38 ALA n 1 39 ASN n 1 40 THR n 1 41 VAL n 1 42 HIS n 1 43 VAL n 1 44 LEU n 1 45 ARG n 1 46 LEU n 1 47 GLU n 1 48 LEU n 1 49 ASP n 1 50 GLN n 1 51 SER n 1 52 PHE n 1 53 ILE n 1 54 LEU n 1 55 ASP n 1 56 LEU n 1 57 THR n 1 58 LYS n 1 59 VAL n 1 60 ALA n 1 61 ALA n 1 62 GLU n 1 63 ILE n 1 64 VAL n 1 65 ASP n 1 66 SER n 1 67 SER n 1 68 LYS n 1 69 TYR n 1 70 SER n 1 71 LYS n 1 72 GLU n 1 73 ASP n 1 74 GLY n 1 75 VAL n 1 76 ILE n 1 77 LEU n 1 78 GLU n 1 79 VAL n 1 80 THR n 1 81 VAL n 1 82 SER n 1 83 ASN n 1 84 GLY n 1 85 ARG n 1 86 ASP n 1 87 SER n 1 88 PHE n 1 89 LEU n 1 90 LEU n 1 91 LYS n 1 92 LEU n 1 93 PRO n 1 94 THR n 1 95 VAL n 1 96 TYR n 1 97 PRO n 1 98 ASN n 1 99 LEU n 1 100 LYS n 1 101 LEU n 1 102 TYR n 1 103 THR n 1 104 ASP n 1 105 GLY n 1 106 LYS n 1 107 LEU n 1 108 LEU n 1 109 ASN n 1 110 PRO n 1 111 LEU n 1 112 VAL n 1 113 GLU n 1 114 GLN n 1 115 ASP n 1 116 PHE n 1 117 GLY n 1 118 ALA n 1 119 HIS n 1 120 ARG n 1 121 LYS n 1 122 ARG n 1 123 HIS n 1 124 ARG n 1 125 ILE n 1 126 GLY n 1 127 ASP n 1 128 PRO n 1 129 HIS n 1 130 PHE n 1 131 HIS n 1 132 GLN n 1 133 ASN n 1 134 LEU n 1 135 ILE n 1 136 VAL n 1 137 THR n 1 138 VAL n 1 139 GLN n 1 140 SER n 1 141 ARG n 1 142 LEU n 1 143 ASN n 1 144 ALA n 1 145 ASP n 1 146 ILE n 1 147 ASP n 1 148 TYR n 1 149 ARG n 1 150 LEU n 1 151 HIS n 1 152 VAL n 1 153 THR n 1 154 HIS n 1 155 LEU n 1 156 ASP n 1 157 ARG n 1 158 ALA n 1 159 GLN n 1 160 TYR n 1 161 ASP n 1 162 PHE n 1 163 LEU n 1 164 LYS n 1 165 PHE n 1 166 LYS n 1 167 THR n 1 168 GLY n 1 169 GLN n 1 170 THR n 1 171 THR n 1 172 LYS n 1 173 THR n 1 174 LEU n 1 175 SER n 1 176 ASN n 1 177 GLN n 1 178 LYS n 1 179 LEU n 1 180 THR n 1 181 PHE n 1 182 VAL n 1 183 LYS n 1 184 PRO n 1 185 ILE n 1 186 GLY n 1 187 PHE n 1 188 PHE n 1 189 LEU n 1 190 ASN n 1 191 CYS n 1 192 SER n 1 193 GLU n 1 194 GLN n 1 195 ASN n 1 196 ILE n 1 197 SER n 1 198 GLN n 1 199 PHE n 1 200 HIS n 1 201 VAL n 1 202 THR n 1 203 LEU n 1 204 TYR n 1 205 SER n 1 206 GLU n 1 207 ASP n 1 208 ASP n 1 209 ILE n 1 210 CYS n 1 211 ALA n 1 212 ASN n 1 213 LEU n 1 214 ILE n 1 215 THR n 1 216 VAL n 1 217 PRO n 1 218 ALA n 1 219 ASN n 1 220 GLU n 1 221 SER n 1 222 ILE n 1 223 TYR n 1 224 ASP n 1 225 ARG n 1 226 SER n 1 227 VAL n 1 228 ILE n 1 229 SER n 1 230 ASP n 1 231 LYS n 1 232 THR n 1 233 HIS n 1 234 ASN n 1 235 ARG n 1 236 ARG n 1 237 VAL n 1 238 LEU n 1 239 SER n 1 240 PHE n 1 241 THR n 1 242 LYS n 1 243 ARG n 1 244 ALA n 1 245 ASP n 1 246 ILE n 1 247 PHE n 1 248 PHE n 1 249 THR n 1 250 GLU n 1 251 THR n 1 252 GLU n 1 253 ILE n 1 254 SER n 1 255 MET n 1 256 PHE n 1 257 LYS n 1 258 SER n 1 259 PHE n 1 260 ARG n 1 261 ILE n 1 262 PHE n 1 263 VAL n 1 264 PHE n 1 265 ILE n 1 266 ALA n 1 267 PRO n 1 268 ASP n 1 269 ASP n 1 270 SER n 1 271 GLY n 1 272 CYS n 1 273 SER n 1 274 THR n 1 275 ASN n 1 276 THR n 1 277 SER n 1 278 ARG n 1 279 LYS n 1 280 SER n 1 281 PHE n 1 282 ASN n 1 283 GLU n 1 284 LYS n 1 285 LYS n 1 286 LYS n 1 287 ILE n 1 288 SER n 1 289 PHE n 1 290 GLU n 1 291 PHE n 1 292 LYS n 1 293 LYS n 1 294 LEU n 1 295 GLU n 1 296 ASN n 1 297 GLN n 1 298 SER n 1 299 TYR n 1 300 ALA n 1 301 VAL n 1 302 PRO n 1 303 THR n 1 304 ALA n 1 305 LEU n 1 306 MET n 1 307 MET n 1 308 ILE n 1 309 PHE n 1 310 LEU n 1 311 THR n 1 312 THR n 1 313 PRO n 1 314 CYS n 1 315 LEU n 1 316 LEU n 1 317 PHE n 1 318 LEU n 1 319 PRO n 1 320 ILE n 1 321 VAL n 1 322 ILE n 1 323 ASN n 1 324 ILE n 1 325 ILE n 1 326 LYS n 1 327 ASN n 1 328 SER n 1 329 ARG n 1 330 LYS n 1 331 LEU n 1 332 ALA n 1 333 PRO n 1 334 SER n 1 335 GLN n 1 336 SER n 1 337 ASN n 1 338 LEU n 1 339 ILE n 1 340 SER n 1 341 PHE n 1 342 SER n 1 343 PRO n 1 344 VAL n 1 345 PRO n 1 346 SER n 1 347 GLU n 1 348 GLN n 1 349 ARG n 1 350 ASP n 1 351 MET n 1 352 ASP n 1 353 LEU n 1 354 SER n 1 355 HIS n 1 356 ASP n 1 357 GLU n 1 358 GLN n 1 359 GLN n 1 360 ASN n 1 361 THR n 1 362 SER n 1 363 SER n 1 364 GLU n 1 365 LEU n 1 366 GLU n 1 367 ASN n 1 368 ASN n 1 369 GLY n 1 370 GLU n 1 371 ILE n 1 372 PRO n 1 373 ALA n 1 374 ALA n 1 375 GLU n 1 376 ASN n 1 377 GLN n 1 378 ILE n 1 379 VAL n 1 380 GLU n 1 381 GLU n 1 382 ILE n 1 383 THR n 1 384 ALA n 1 385 GLU n 1 386 ASN n 1 387 GLN n 1 388 GLU n 1 389 THR n 1 390 SER n 1 391 VAL n 1 392 GLU n 1 393 GLU n 1 394 GLY n 1 395 ASN n 1 396 ARG n 1 397 GLU n 1 398 ILE n 1 399 GLN n 1 400 VAL n 1 401 LYS n 1 402 ILE n 1 403 PRO n 1 404 LEU n 1 405 LYS n 1 406 GLN n 1 407 ASP n 1 408 SER n 1 409 LEU n 1 410 SER n 1 411 LEU n 1 412 HIS n 1 413 GLY n 1 414 GLN n 1 415 MET n 1 416 LEU n 1 417 GLN n 1 418 TYR n 1 419 PRO n 1 420 VAL n 1 421 ALA n 1 422 ILE n 1 423 ILE n 1 424 LEU n 1 425 PRO n 1 426 VAL n 1 427 LEU n 1 428 MET n 1 429 HIS n 1 430 THR n 1 431 ALA n 1 432 ILE n 1 433 GLU n 1 434 PHE n 1 435 HIS n 1 436 LYS n 1 437 TRP n 1 438 THR n 1 439 THR n 1 440 SER n 1 441 THR n 1 442 MET n 1 443 ALA n 1 444 ASN n 1 445 ARG n 1 446 ASP n 1 447 GLU n 1 448 MET n 1 449 CYS n 1 450 PHE n 1 451 HIS n 1 452 ASN n 1 453 HIS n 1 454 ALA n 1 455 CYS n 1 456 ALA n 1 457 ARG n 1 458 PRO n 1 459 LEU n 1 460 GLY n 1 461 GLU n 1 462 LEU n 1 463 ARG n 1 464 ALA n 1 465 TRP n 1 466 ASN n 1 467 ASN n 1 468 ILE n 1 469 ILE n 1 470 THR n 1 471 ASN n 1 472 ILE n 1 473 GLY n 1 474 TYR n 1 475 THR n 1 476 LEU n 1 477 TYR n 1 478 GLY n 1 479 ALA n 1 480 ILE n 1 481 PHE n 1 482 ILE n 1 483 VAL n 1 484 LEU n 1 485 SER n 1 486 ILE n 1 487 CYS n 1 488 ARG n 1 489 ARG n 1 490 GLY n 1 491 ARG n 1 492 HIS n 1 493 GLU n 1 494 TYR n 1 495 SER n 1 496 HIS n 1 497 VAL n 1 498 PHE n 1 499 GLY n 1 500 THR n 1 501 TYR n 1 502 GLU n 1 503 CYS n 1 504 THR n 1 505 LEU n 1 506 LEU n 1 507 ASP n 1 508 VAL n 1 509 THR n 1 510 ILE n 1 511 GLY n 1 512 VAL n 1 513 PHE n 1 514 MET n 1 515 VAL n 1 516 LEU n 1 517 GLN n 1 518 SER n 1 519 ILE n 1 520 ALA n 1 521 SER n 1 522 ALA n 1 523 THR n 1 524 TYR n 1 525 HIS n 1 526 ILE n 1 527 CYS n 1 528 PRO n 1 529 SER n 1 530 ASP n 1 531 VAL n 1 532 ALA n 1 533 PHE n 1 534 GLN n 1 535 PHE n 1 536 ASP n 1 537 THR n 1 538 PRO n 1 539 CYS n 1 540 ILE n 1 541 GLN n 1 542 VAL n 1 543 ILE n 1 544 CYS n 1 545 GLY n 1 546 LEU n 1 547 LEU n 1 548 MET n 1 549 VAL n 1 550 ARG n 1 551 GLN n 1 552 TRP n 1 553 PHE n 1 554 VAL n 1 555 ARG n 1 556 HIS n 1 557 GLU n 1 558 SER n 1 559 PRO n 1 560 SER n 1 561 PRO n 1 562 ALA n 1 563 TYR n 1 564 THR n 1 565 ASN n 1 566 ILE n 1 567 LEU n 1 568 LEU n 1 569 VAL n 1 570 GLY n 1 571 VAL n 1 572 VAL n 1 573 SER n 1 574 LEU n 1 575 ASN n 1 576 PHE n 1 577 LEU n 1 578 ILE n 1 579 SER n 1 580 ALA n 1 581 PHE n 1 582 SER n 1 583 LYS n 1 584 THR n 1 585 SER n 1 586 TYR n 1 587 VAL n 1 588 ARG n 1 589 PHE n 1 590 ILE n 1 591 ILE n 1 592 ALA n 1 593 VAL n 1 594 ILE n 1 595 HIS n 1 596 VAL n 1 597 ILE n 1 598 VAL n 1 599 VAL n 1 600 GLY n 1 601 SER n 1 602 ILE n 1 603 CYS n 1 604 LEU n 1 605 ALA n 1 606 LYS n 1 607 GLU n 1 608 ARG n 1 609 SER n 1 610 LEU n 1 611 GLY n 1 612 SER n 1 613 GLU n 1 614 LYS n 1 615 LEU n 1 616 LYS n 1 617 THR n 1 618 ARG n 1 619 PHE n 1 620 PHE n 1 621 ILE n 1 622 MET n 1 623 ALA n 1 624 PHE n 1 625 SER n 1 626 MET n 1 627 GLY n 1 628 ASN n 1 629 PHE n 1 630 ALA n 1 631 ALA n 1 632 ILE n 1 633 VAL n 1 634 MET n 1 635 TYR n 1 636 LEU n 1 637 THR n 1 638 LEU n 1 639 SER n 1 640 ALA n 1 641 PHE n 1 642 HIS n 1 643 LEU n 1 644 ASN n 1 645 GLN n 1 646 ILE n 1 647 ALA n 1 648 THR n 1 649 TYR n 1 650 CYS n 1 651 PHE n 1 652 ILE n 1 653 ILE n 1 654 ASN n 1 655 CYS n 1 656 ILE n 1 657 MET n 1 658 TYR n 1 659 LEU n 1 660 MET n 1 661 TYR n 1 662 TYR n 1 663 GLY n 1 664 CYS n 1 665 MET n 1 666 LYS n 1 667 VAL n 1 668 LEU n 1 669 HIS n 1 670 SER n 1 671 GLU n 1 672 ARG n 1 673 ILE n 1 674 THR n 1 675 SER n 1 676 LYS n 1 677 ALA n 1 678 LYS n 1 679 LEU n 1 680 CYS n 1 681 GLY n 1 682 ALA n 1 683 LEU n 1 684 SER n 1 685 LEU n 1 686 LEU n 1 687 ALA n 1 688 TRP n 1 689 ALA n 1 690 VAL n 1 691 ALA n 1 692 GLY n 1 693 PHE n 1 694 PHE n 1 695 PHE n 1 696 PHE n 1 697 GLN n 1 698 ASP n 1 699 ASP n 1 700 THR n 1 701 ASP n 1 702 TRP n 1 703 THR n 1 704 ARG n 1 705 SER n 1 706 ALA n 1 707 ALA n 1 708 ALA n 1 709 SER n 1 710 ARG n 1 711 ALA n 1 712 LEU n 1 713 ASN n 1 714 LYS n 1 715 PRO n 1 716 CYS n 1 717 LEU n 1 718 LEU n 1 719 LEU n 1 720 GLY n 1 721 PHE n 1 722 PHE n 1 723 GLY n 1 724 SER n 1 725 HIS n 1 726 ASP n 1 727 LEU n 1 728 TRP n 1 729 HIS n 1 730 ILE n 1 731 PHE n 1 732 GLY n 1 733 ALA n 1 734 LEU n 1 735 ALA n 1 736 GLY n 1 737 LEU n 1 738 PHE n 1 739 THR n 1 740 PHE n 1 741 ILE n 1 742 PHE n 1 743 VAL n 1 744 SER n 1 745 PHE n 1 746 VAL n 1 747 ASP n 1 748 ASP n 1 749 ASP n 1 750 LEU n 1 751 ILE n 1 752 ASN n 1 753 THR n 1 754 ARG n 1 755 LYS n 1 756 THR n 1 757 SER n 1 758 ILE n 1 759 ASN n 1 760 ILE n 1 761 PHE n 2 1 A n 2 2 A n 2 3 A n 2 4 A n 2 5 A n 2 6 A n 2 7 A n 2 8 A n 2 9 A n 2 10 A n 2 11 A n 3 1 U n 3 2 U n 3 3 U n 3 4 U n 3 5 U n 3 6 U n 3 7 U n 3 8 U n 3 9 U n 3 10 U n 3 11 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 761 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'sid-1, rde-7, rsd-8, C04F5.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 11 'synthetic construct' ? 32630 ? 3 1 sample 1 11 'synthetic construct' ? 32630 ? # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LBN non-polymer . 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine '(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate' 'C42 H82 N O8 P' 760.076 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Y01 non-polymer . 'CHOLESTEROL HEMISUCCINATE' ? 'C31 H50 O4' 486.726 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 16 ? ? ? A . n A 1 2 PRO 2 17 ? ? ? A . n A 1 3 GLN 3 18 ? ? ? A . n A 1 4 ASN 4 19 ? ? ? A . n A 1 5 ASN 5 20 ? ? ? A . n A 1 6 SER 6 21 ? ? ? A . n A 1 7 THR 7 22 ? ? ? A . n A 1 8 THR 8 23 ? ? ? A . n A 1 9 PRO 9 24 ? ? ? A . n A 1 10 SER 10 25 ? ? ? A . n A 1 11 PRO 11 26 ? ? ? A . n A 1 12 ILE 12 27 ? ? ? A . n A 1 13 ILE 13 28 ? ? ? A . n A 1 14 THR 14 29 ? ? ? A . n A 1 15 SER 15 30 ? ? ? A . n A 1 16 SER 16 31 ? ? ? A . n A 1 17 ASN 17 32 ? ? ? A . n A 1 18 SER 18 33 ? ? ? A . n A 1 19 SER 19 34 34 SER SER A . n A 1 20 VAL 20 35 35 VAL VAL A . n A 1 21 LEU 21 36 36 LEU LEU A . n A 1 22 VAL 22 37 37 VAL VAL A . n A 1 23 PHE 23 38 38 PHE PHE A . n A 1 24 GLU 24 39 39 GLU GLU A . n A 1 25 ILE 25 40 40 ILE ILE A . n A 1 26 SER 26 41 41 SER SER A . n A 1 27 SER 27 42 42 SER SER A . n A 1 28 LYS 28 43 43 LYS LYS A . n A 1 29 MET 29 44 44 MET MET A . n A 1 30 LYS 30 45 45 LYS LYS A . n A 1 31 MET 31 46 46 MET MET A . n A 1 32 ILE 32 47 47 ILE ILE A . n A 1 33 GLU 33 48 48 GLU GLU A . n A 1 34 LYS 34 49 49 LYS LYS A . n A 1 35 LYS 35 50 50 LYS LYS A . n A 1 36 LEU 36 51 51 LEU LEU A . n A 1 37 GLU 37 52 52 GLU GLU A . n A 1 38 ALA 38 53 53 ALA ALA A . n A 1 39 ASN 39 54 54 ASN ASN A . n A 1 40 THR 40 55 55 THR THR A . n A 1 41 VAL 41 56 56 VAL VAL A . n A 1 42 HIS 42 57 57 HIS HIS A . n A 1 43 VAL 43 58 58 VAL VAL A . n A 1 44 LEU 44 59 59 LEU LEU A . n A 1 45 ARG 45 60 60 ARG ARG A . n A 1 46 LEU 46 61 61 LEU LEU A . n A 1 47 GLU 47 62 62 GLU GLU A . n A 1 48 LEU 48 63 63 LEU LEU A . n A 1 49 ASP 49 64 64 ASP ASP A . n A 1 50 GLN 50 65 65 GLN GLN A . n A 1 51 SER 51 66 66 SER SER A . n A 1 52 PHE 52 67 67 PHE PHE A . n A 1 53 ILE 53 68 68 ILE ILE A . n A 1 54 LEU 54 69 69 LEU LEU A . n A 1 55 ASP 55 70 70 ASP ASP A . n A 1 56 LEU 56 71 71 LEU LEU A . n A 1 57 THR 57 72 72 THR THR A . n A 1 58 LYS 58 73 73 LYS LYS A . n A 1 59 VAL 59 74 74 VAL VAL A . n A 1 60 ALA 60 75 75 ALA ALA A . n A 1 61 ALA 61 76 76 ALA ALA A . n A 1 62 GLU 62 77 77 GLU GLU A . n A 1 63 ILE 63 78 78 ILE ILE A . n A 1 64 VAL 64 79 79 VAL VAL A . n A 1 65 ASP 65 80 80 ASP ASP A . n A 1 66 SER 66 81 81 SER SER A . n A 1 67 SER 67 82 82 SER SER A . n A 1 68 LYS 68 83 83 LYS LYS A . n A 1 69 TYR 69 84 84 TYR TYR A . n A 1 70 SER 70 85 85 SER SER A . n A 1 71 LYS 71 86 86 LYS LYS A . n A 1 72 GLU 72 87 87 GLU GLU A . n A 1 73 ASP 73 88 88 ASP ASP A . n A 1 74 GLY 74 89 89 GLY GLY A . n A 1 75 VAL 75 90 90 VAL VAL A . n A 1 76 ILE 76 91 91 ILE ILE A . n A 1 77 LEU 77 92 92 LEU LEU A . n A 1 78 GLU 78 93 93 GLU GLU A . n A 1 79 VAL 79 94 94 VAL VAL A . n A 1 80 THR 80 95 95 THR THR A . n A 1 81 VAL 81 96 96 VAL VAL A . n A 1 82 SER 82 97 97 SER SER A . n A 1 83 ASN 83 98 98 ASN ASN A . n A 1 84 GLY 84 99 99 GLY GLY A . n A 1 85 ARG 85 100 100 ARG ARG A . n A 1 86 ASP 86 101 101 ASP ASP A . n A 1 87 SER 87 102 102 SER SER A . n A 1 88 PHE 88 103 103 PHE PHE A . n A 1 89 LEU 89 104 104 LEU LEU A . n A 1 90 LEU 90 105 105 LEU LEU A . n A 1 91 LYS 91 106 106 LYS LYS A . n A 1 92 LEU 92 107 107 LEU LEU A . n A 1 93 PRO 93 108 108 PRO PRO A . n A 1 94 THR 94 109 109 THR THR A . n A 1 95 VAL 95 110 110 VAL VAL A . n A 1 96 TYR 96 111 111 TYR TYR A . n A 1 97 PRO 97 112 112 PRO PRO A . n A 1 98 ASN 98 113 113 ASN ASN A . n A 1 99 LEU 99 114 114 LEU LEU A . n A 1 100 LYS 100 115 115 LYS LYS A . n A 1 101 LEU 101 116 116 LEU LEU A . n A 1 102 TYR 102 117 117 TYR TYR A . n A 1 103 THR 103 118 118 THR THR A . n A 1 104 ASP 104 119 119 ASP ASP A . n A 1 105 GLY 105 120 120 GLY GLY A . n A 1 106 LYS 106 121 121 LYS LYS A . n A 1 107 LEU 107 122 122 LEU LEU A . n A 1 108 LEU 108 123 123 LEU LEU A . n A 1 109 ASN 109 124 124 ASN ASN A . n A 1 110 PRO 110 125 125 PRO PRO A . n A 1 111 LEU 111 126 126 LEU LEU A . n A 1 112 VAL 112 127 127 VAL VAL A . n A 1 113 GLU 113 128 128 GLU GLU A . n A 1 114 GLN 114 129 129 GLN GLN A . n A 1 115 ASP 115 130 130 ASP ASP A . n A 1 116 PHE 116 131 131 PHE PHE A . n A 1 117 GLY 117 132 132 GLY GLY A . n A 1 118 ALA 118 133 ? ? ? A . n A 1 119 HIS 119 134 ? ? ? A . n A 1 120 ARG 120 135 ? ? ? A . n A 1 121 LYS 121 136 ? ? ? A . n A 1 122 ARG 122 137 ? ? ? A . n A 1 123 HIS 123 138 ? ? ? A . n A 1 124 ARG 124 139 ? ? ? A . n A 1 125 ILE 125 140 ? ? ? A . n A 1 126 GLY 126 141 ? ? ? A . n A 1 127 ASP 127 142 ? ? ? A . n A 1 128 PRO 128 143 ? ? ? A . n A 1 129 HIS 129 144 144 HIS HIS A . n A 1 130 PHE 130 145 145 PHE PHE A . n A 1 131 HIS 131 146 146 HIS HIS A . n A 1 132 GLN 132 147 147 GLN GLN A . n A 1 133 ASN 133 148 148 ASN ASN A . n A 1 134 LEU 134 149 149 LEU LEU A . n A 1 135 ILE 135 150 150 ILE ILE A . n A 1 136 VAL 136 151 151 VAL VAL A . n A 1 137 THR 137 152 152 THR THR A . n A 1 138 VAL 138 153 153 VAL VAL A . n A 1 139 GLN 139 154 154 GLN GLN A . n A 1 140 SER 140 155 155 SER SER A . n A 1 141 ARG 141 156 156 ARG ARG A . n A 1 142 LEU 142 157 157 LEU LEU A . n A 1 143 ASN 143 158 158 ASN ASN A . n A 1 144 ALA 144 159 159 ALA ALA A . n A 1 145 ASP 145 160 160 ASP ASP A . n A 1 146 ILE 146 161 161 ILE ILE A . n A 1 147 ASP 147 162 162 ASP ASP A . n A 1 148 TYR 148 163 163 TYR TYR A . n A 1 149 ARG 149 164 164 ARG ARG A . n A 1 150 LEU 150 165 165 LEU LEU A . n A 1 151 HIS 151 166 166 HIS HIS A . n A 1 152 VAL 152 167 167 VAL VAL A . n A 1 153 THR 153 168 168 THR THR A . n A 1 154 HIS 154 169 169 HIS HIS A . n A 1 155 LEU 155 170 170 LEU LEU A . n A 1 156 ASP 156 171 171 ASP ASP A . n A 1 157 ARG 157 172 172 ARG ARG A . n A 1 158 ALA 158 173 173 ALA ALA A . n A 1 159 GLN 159 174 174 GLN GLN A . n A 1 160 TYR 160 175 175 TYR TYR A . n A 1 161 ASP 161 176 176 ASP ASP A . n A 1 162 PHE 162 177 177 PHE PHE A . n A 1 163 LEU 163 178 178 LEU LEU A . n A 1 164 LYS 164 179 179 LYS LYS A . n A 1 165 PHE 165 180 180 PHE PHE A . n A 1 166 LYS 166 181 181 LYS LYS A . n A 1 167 THR 167 182 182 THR THR A . n A 1 168 GLY 168 183 183 GLY GLY A . n A 1 169 GLN 169 184 184 GLN GLN A . n A 1 170 THR 170 185 185 THR THR A . n A 1 171 THR 171 186 186 THR THR A . n A 1 172 LYS 172 187 187 LYS LYS A . n A 1 173 THR 173 188 188 THR THR A . n A 1 174 LEU 174 189 189 LEU LEU A . n A 1 175 SER 175 190 190 SER SER A . n A 1 176 ASN 176 191 191 ASN ASN A . n A 1 177 GLN 177 192 192 GLN GLN A . n A 1 178 LYS 178 193 193 LYS LYS A . n A 1 179 LEU 179 194 194 LEU LEU A . n A 1 180 THR 180 195 195 THR THR A . n A 1 181 PHE 181 196 196 PHE PHE A . n A 1 182 VAL 182 197 197 VAL VAL A . n A 1 183 LYS 183 198 198 LYS LYS A . n A 1 184 PRO 184 199 199 PRO PRO A . n A 1 185 ILE 185 200 200 ILE ILE A . n A 1 186 GLY 186 201 201 GLY GLY A . n A 1 187 PHE 187 202 202 PHE PHE A . n A 1 188 PHE 188 203 203 PHE PHE A . n A 1 189 LEU 189 204 204 LEU LEU A . n A 1 190 ASN 190 205 205 ASN ASN A . n A 1 191 CYS 191 206 206 CYS CYS A . n A 1 192 SER 192 207 207 SER SER A . n A 1 193 GLU 193 208 208 GLU GLU A . n A 1 194 GLN 194 209 209 GLN GLN A . n A 1 195 ASN 195 210 210 ASN ASN A . n A 1 196 ILE 196 211 211 ILE ILE A . n A 1 197 SER 197 212 212 SER SER A . n A 1 198 GLN 198 213 213 GLN GLN A . n A 1 199 PHE 199 214 214 PHE PHE A . n A 1 200 HIS 200 215 215 HIS HIS A . n A 1 201 VAL 201 216 216 VAL VAL A . n A 1 202 THR 202 217 217 THR THR A . n A 1 203 LEU 203 218 218 LEU LEU A . n A 1 204 TYR 204 219 219 TYR TYR A . n A 1 205 SER 205 220 220 SER SER A . n A 1 206 GLU 206 221 221 GLU GLU A . n A 1 207 ASP 207 222 222 ASP ASP A . n A 1 208 ASP 208 223 223 ASP ASP A . n A 1 209 ILE 209 224 224 ILE ILE A . n A 1 210 CYS 210 225 225 CYS CYS A . n A 1 211 ALA 211 226 226 ALA ALA A . n A 1 212 ASN 212 227 227 ASN ASN A . n A 1 213 LEU 213 228 228 LEU LEU A . n A 1 214 ILE 214 229 229 ILE ILE A . n A 1 215 THR 215 230 230 THR THR A . n A 1 216 VAL 216 231 231 VAL VAL A . n A 1 217 PRO 217 232 232 PRO PRO A . n A 1 218 ALA 218 233 233 ALA ALA A . n A 1 219 ASN 219 234 234 ASN ASN A . n A 1 220 GLU 220 235 235 GLU GLU A . n A 1 221 SER 221 236 236 SER SER A . n A 1 222 ILE 222 237 237 ILE ILE A . n A 1 223 TYR 223 238 238 TYR TYR A . n A 1 224 ASP 224 239 239 ASP ASP A . n A 1 225 ARG 225 240 240 ARG ARG A . n A 1 226 SER 226 241 241 SER SER A . n A 1 227 VAL 227 242 242 VAL VAL A . n A 1 228 ILE 228 243 243 ILE ILE A . n A 1 229 SER 229 244 244 SER SER A . n A 1 230 ASP 230 245 245 ASP ASP A . n A 1 231 LYS 231 246 246 LYS LYS A . n A 1 232 THR 232 247 247 THR THR A . n A 1 233 HIS 233 248 248 HIS HIS A . n A 1 234 ASN 234 249 249 ASN ASN A . n A 1 235 ARG 235 250 250 ARG ARG A . n A 1 236 ARG 236 251 251 ARG ARG A . n A 1 237 VAL 237 252 252 VAL VAL A . n A 1 238 LEU 238 253 253 LEU LEU A . n A 1 239 SER 239 254 254 SER SER A . n A 1 240 PHE 240 255 255 PHE PHE A . n A 1 241 THR 241 256 256 THR THR A . n A 1 242 LYS 242 257 257 LYS LYS A . n A 1 243 ARG 243 258 258 ARG ARG A . n A 1 244 ALA 244 259 259 ALA ALA A . n A 1 245 ASP 245 260 260 ASP ASP A . n A 1 246 ILE 246 261 261 ILE ILE A . n A 1 247 PHE 247 262 262 PHE PHE A . n A 1 248 PHE 248 263 263 PHE PHE A . n A 1 249 THR 249 264 264 THR THR A . n A 1 250 GLU 250 265 265 GLU GLU A . n A 1 251 THR 251 266 266 THR THR A . n A 1 252 GLU 252 267 267 GLU GLU A . n A 1 253 ILE 253 268 268 ILE ILE A . n A 1 254 SER 254 269 269 SER SER A . n A 1 255 MET 255 270 270 MET MET A . n A 1 256 PHE 256 271 271 PHE PHE A . n A 1 257 LYS 257 272 272 LYS LYS A . n A 1 258 SER 258 273 273 SER SER A . n A 1 259 PHE 259 274 274 PHE PHE A . n A 1 260 ARG 260 275 275 ARG ARG A . n A 1 261 ILE 261 276 276 ILE ILE A . n A 1 262 PHE 262 277 277 PHE PHE A . n A 1 263 VAL 263 278 278 VAL VAL A . n A 1 264 PHE 264 279 279 PHE PHE A . n A 1 265 ILE 265 280 280 ILE ILE A . n A 1 266 ALA 266 281 281 ALA ALA A . n A 1 267 PRO 267 282 282 PRO PRO A . n A 1 268 ASP 268 283 283 ASP ASP A . n A 1 269 ASP 269 284 284 ASP ASP A . n A 1 270 SER 270 285 285 SER SER A . n A 1 271 GLY 271 286 286 GLY GLY A . n A 1 272 CYS 272 287 287 CYS CYS A . n A 1 273 SER 273 288 288 SER SER A . n A 1 274 THR 274 289 289 THR THR A . n A 1 275 ASN 275 290 ? ? ? A . n A 1 276 THR 276 291 ? ? ? A . n A 1 277 SER 277 292 ? ? ? A . n A 1 278 ARG 278 293 ? ? ? A . n A 1 279 LYS 279 294 ? ? ? A . n A 1 280 SER 280 295 295 SER SER A . n A 1 281 PHE 281 296 296 PHE PHE A . n A 1 282 ASN 282 297 297 ASN ASN A . n A 1 283 GLU 283 298 298 GLU GLU A . n A 1 284 LYS 284 299 299 LYS LYS A . n A 1 285 LYS 285 300 300 LYS LYS A . n A 1 286 LYS 286 301 301 LYS LYS A . n A 1 287 ILE 287 302 302 ILE ILE A . n A 1 288 SER 288 303 303 SER SER A . n A 1 289 PHE 289 304 304 PHE PHE A . n A 1 290 GLU 290 305 305 GLU GLU A . n A 1 291 PHE 291 306 306 PHE PHE A . n A 1 292 LYS 292 307 307 LYS LYS A . n A 1 293 LYS 293 308 308 LYS LYS A . n A 1 294 LEU 294 309 309 LEU LEU A . n A 1 295 GLU 295 310 310 GLU GLU A . n A 1 296 ASN 296 311 311 ASN ASN A . n A 1 297 GLN 297 312 312 GLN GLN A . n A 1 298 SER 298 313 313 SER SER A . n A 1 299 TYR 299 314 314 TYR TYR A . n A 1 300 ALA 300 315 315 ALA ALA A . n A 1 301 VAL 301 316 316 VAL VAL A . n A 1 302 PRO 302 317 317 PRO PRO A . n A 1 303 THR 303 318 318 THR THR A . n A 1 304 ALA 304 319 319 ALA ALA A . n A 1 305 LEU 305 320 320 LEU LEU A . n A 1 306 MET 306 321 321 MET MET A . n A 1 307 MET 307 322 322 MET MET A . n A 1 308 ILE 308 323 323 ILE ILE A . n A 1 309 PHE 309 324 324 PHE PHE A . n A 1 310 LEU 310 325 325 LEU LEU A . n A 1 311 THR 311 326 326 THR THR A . n A 1 312 THR 312 327 327 THR THR A . n A 1 313 PRO 313 328 328 PRO PRO A . n A 1 314 CYS 314 329 329 CYS CYS A . n A 1 315 LEU 315 330 330 LEU LEU A . n A 1 316 LEU 316 331 331 LEU LEU A . n A 1 317 PHE 317 332 332 PHE PHE A . n A 1 318 LEU 318 333 333 LEU LEU A . n A 1 319 PRO 319 334 334 PRO PRO A . n A 1 320 ILE 320 335 335 ILE ILE A . n A 1 321 VAL 321 336 336 VAL VAL A . n A 1 322 ILE 322 337 337 ILE ILE A . n A 1 323 ASN 323 338 338 ASN ASN A . n A 1 324 ILE 324 339 339 ILE ILE A . n A 1 325 ILE 325 340 340 ILE ILE A . n A 1 326 LYS 326 341 341 LYS LYS A . n A 1 327 ASN 327 342 342 ASN ASN A . n A 1 328 SER 328 343 ? ? ? A . n A 1 329 ARG 329 344 ? ? ? A . n A 1 330 LYS 330 345 ? ? ? A . n A 1 331 LEU 331 346 ? ? ? A . n A 1 332 ALA 332 347 ? ? ? A . n A 1 333 PRO 333 348 ? ? ? A . n A 1 334 SER 334 349 ? ? ? A . n A 1 335 GLN 335 350 ? ? ? A . n A 1 336 SER 336 351 ? ? ? A . n A 1 337 ASN 337 352 ? ? ? A . n A 1 338 LEU 338 353 ? ? ? A . n A 1 339 ILE 339 354 ? ? ? A . n A 1 340 SER 340 355 ? ? ? A . n A 1 341 PHE 341 356 ? ? ? A . n A 1 342 SER 342 357 ? ? ? A . n A 1 343 PRO 343 358 ? ? ? A . n A 1 344 VAL 344 359 ? ? ? A . n A 1 345 PRO 345 360 ? ? ? A . n A 1 346 SER 346 361 ? ? ? A . n A 1 347 GLU 347 362 ? ? ? A . n A 1 348 GLN 348 363 ? ? ? A . n A 1 349 ARG 349 364 ? ? ? A . n A 1 350 ASP 350 365 ? ? ? A . n A 1 351 MET 351 366 ? ? ? A . n A 1 352 ASP 352 367 ? ? ? A . n A 1 353 LEU 353 368 ? ? ? A . n A 1 354 SER 354 369 ? ? ? A . n A 1 355 HIS 355 370 ? ? ? A . n A 1 356 ASP 356 371 ? ? ? A . n A 1 357 GLU 357 372 ? ? ? A . n A 1 358 GLN 358 373 ? ? ? A . n A 1 359 GLN 359 374 ? ? ? A . n A 1 360 ASN 360 375 ? ? ? A . n A 1 361 THR 361 376 ? ? ? A . n A 1 362 SER 362 377 ? ? ? A . n A 1 363 SER 363 378 ? ? ? A . n A 1 364 GLU 364 379 ? ? ? A . n A 1 365 LEU 365 380 ? ? ? A . n A 1 366 GLU 366 381 ? ? ? A . n A 1 367 ASN 367 382 ? ? ? A . n A 1 368 ASN 368 383 ? ? ? A . n A 1 369 GLY 369 384 ? ? ? A . n A 1 370 GLU 370 385 ? ? ? A . n A 1 371 ILE 371 386 ? ? ? A . n A 1 372 PRO 372 387 ? ? ? A . n A 1 373 ALA 373 388 ? ? ? A . n A 1 374 ALA 374 389 ? ? ? A . n A 1 375 GLU 375 390 ? ? ? A . n A 1 376 ASN 376 391 ? ? ? A . n A 1 377 GLN 377 392 ? ? ? A . n A 1 378 ILE 378 393 ? ? ? A . n A 1 379 VAL 379 394 ? ? ? A . n A 1 380 GLU 380 395 ? ? ? A . n A 1 381 GLU 381 396 ? ? ? A . n A 1 382 ILE 382 397 ? ? ? A . n A 1 383 THR 383 398 ? ? ? A . n A 1 384 ALA 384 399 ? ? ? A . n A 1 385 GLU 385 400 ? ? ? A . n A 1 386 ASN 386 401 ? ? ? A . n A 1 387 GLN 387 402 ? ? ? A . n A 1 388 GLU 388 403 ? ? ? A . n A 1 389 THR 389 404 ? ? ? A . n A 1 390 SER 390 405 ? ? ? A . n A 1 391 VAL 391 406 ? ? ? A . n A 1 392 GLU 392 407 ? ? ? A . n A 1 393 GLU 393 408 ? ? ? A . n A 1 394 GLY 394 409 ? ? ? A . n A 1 395 ASN 395 410 ? ? ? A . n A 1 396 ARG 396 411 ? ? ? A . n A 1 397 GLU 397 412 ? ? ? A . n A 1 398 ILE 398 413 ? ? ? A . n A 1 399 GLN 399 414 ? ? ? A . n A 1 400 VAL 400 415 ? ? ? A . n A 1 401 LYS 401 416 ? ? ? A . n A 1 402 ILE 402 417 ? ? ? A . n A 1 403 PRO 403 418 ? ? ? A . n A 1 404 LEU 404 419 ? ? ? A . n A 1 405 LYS 405 420 ? ? ? A . n A 1 406 GLN 406 421 ? ? ? A . n A 1 407 ASP 407 422 ? ? ? A . n A 1 408 SER 408 423 ? ? ? A . n A 1 409 LEU 409 424 ? ? ? A . n A 1 410 SER 410 425 ? ? ? A . n A 1 411 LEU 411 426 ? ? ? A . n A 1 412 HIS 412 427 ? ? ? A . n A 1 413 GLY 413 428 428 GLY GLY A . n A 1 414 GLN 414 429 429 GLN GLN A . n A 1 415 MET 415 430 430 MET MET A . n A 1 416 LEU 416 431 431 LEU LEU A . n A 1 417 GLN 417 432 432 GLN GLN A . n A 1 418 TYR 418 433 433 TYR TYR A . n A 1 419 PRO 419 434 434 PRO PRO A . n A 1 420 VAL 420 435 435 VAL VAL A . n A 1 421 ALA 421 436 436 ALA ALA A . n A 1 422 ILE 422 437 437 ILE ILE A . n A 1 423 ILE 423 438 438 ILE ILE A . n A 1 424 LEU 424 439 439 LEU LEU A . n A 1 425 PRO 425 440 440 PRO PRO A . n A 1 426 VAL 426 441 441 VAL VAL A . n A 1 427 LEU 427 442 442 LEU LEU A . n A 1 428 MET 428 443 443 MET MET A . n A 1 429 HIS 429 444 444 HIS HIS A . n A 1 430 THR 430 445 445 THR THR A . n A 1 431 ALA 431 446 446 ALA ALA A . n A 1 432 ILE 432 447 447 ILE ILE A . n A 1 433 GLU 433 448 448 GLU GLU A . n A 1 434 PHE 434 449 449 PHE PHE A . n A 1 435 HIS 435 450 450 HIS HIS A . n A 1 436 LYS 436 451 451 LYS LYS A . n A 1 437 TRP 437 452 452 TRP TRP A . n A 1 438 THR 438 453 453 THR THR A . n A 1 439 THR 439 454 454 THR THR A . n A 1 440 SER 440 455 455 SER SER A . n A 1 441 THR 441 456 456 THR THR A . n A 1 442 MET 442 457 457 MET MET A . n A 1 443 ALA 443 458 458 ALA ALA A . n A 1 444 ASN 444 459 459 ASN ASN A . n A 1 445 ARG 445 460 460 ARG ARG A . n A 1 446 ASP 446 461 461 ASP ASP A . n A 1 447 GLU 447 462 462 GLU GLU A . n A 1 448 MET 448 463 463 MET MET A . n A 1 449 CYS 449 464 464 CYS CYS A . n A 1 450 PHE 450 465 465 PHE PHE A . n A 1 451 HIS 451 466 466 HIS HIS A . n A 1 452 ASN 452 467 467 ASN ASN A . n A 1 453 HIS 453 468 468 HIS HIS A . n A 1 454 ALA 454 469 469 ALA ALA A . n A 1 455 CYS 455 470 470 CYS CYS A . n A 1 456 ALA 456 471 471 ALA ALA A . n A 1 457 ARG 457 472 472 ARG ARG A . n A 1 458 PRO 458 473 473 PRO PRO A . n A 1 459 LEU 459 474 474 LEU LEU A . n A 1 460 GLY 460 475 475 GLY GLY A . n A 1 461 GLU 461 476 476 GLU GLU A . n A 1 462 LEU 462 477 477 LEU LEU A . n A 1 463 ARG 463 478 478 ARG ARG A . n A 1 464 ALA 464 479 479 ALA ALA A . n A 1 465 TRP 465 480 480 TRP TRP A . n A 1 466 ASN 466 481 481 ASN ASN A . n A 1 467 ASN 467 482 482 ASN ASN A . n A 1 468 ILE 468 483 483 ILE ILE A . n A 1 469 ILE 469 484 484 ILE ILE A . n A 1 470 THR 470 485 485 THR THR A . n A 1 471 ASN 471 486 486 ASN ASN A . n A 1 472 ILE 472 487 487 ILE ILE A . n A 1 473 GLY 473 488 488 GLY GLY A . n A 1 474 TYR 474 489 489 TYR TYR A . n A 1 475 THR 475 490 490 THR THR A . n A 1 476 LEU 476 491 491 LEU LEU A . n A 1 477 TYR 477 492 492 TYR TYR A . n A 1 478 GLY 478 493 493 GLY GLY A . n A 1 479 ALA 479 494 494 ALA ALA A . n A 1 480 ILE 480 495 495 ILE ILE A . n A 1 481 PHE 481 496 496 PHE PHE A . n A 1 482 ILE 482 497 497 ILE ILE A . n A 1 483 VAL 483 498 498 VAL VAL A . n A 1 484 LEU 484 499 499 LEU LEU A . n A 1 485 SER 485 500 500 SER SER A . n A 1 486 ILE 486 501 501 ILE ILE A . n A 1 487 CYS 487 502 502 CYS CYS A . n A 1 488 ARG 488 503 503 ARG ARG A . n A 1 489 ARG 489 504 504 ARG ARG A . n A 1 490 GLY 490 505 ? ? ? A . n A 1 491 ARG 491 506 ? ? ? A . n A 1 492 HIS 492 507 ? ? ? A . n A 1 493 GLU 493 508 ? ? ? A . n A 1 494 TYR 494 509 ? ? ? A . n A 1 495 SER 495 510 ? ? ? A . n A 1 496 HIS 496 511 511 HIS HIS A . n A 1 497 VAL 497 512 512 VAL VAL A . n A 1 498 PHE 498 513 513 PHE PHE A . n A 1 499 GLY 499 514 514 GLY GLY A . n A 1 500 THR 500 515 515 THR THR A . n A 1 501 TYR 501 516 516 TYR TYR A . n A 1 502 GLU 502 517 517 GLU GLU A . n A 1 503 CYS 503 518 518 CYS CYS A . n A 1 504 THR 504 519 519 THR THR A . n A 1 505 LEU 505 520 520 LEU LEU A . n A 1 506 LEU 506 521 521 LEU LEU A . n A 1 507 ASP 507 522 522 ASP ASP A . n A 1 508 VAL 508 523 523 VAL VAL A . n A 1 509 THR 509 524 524 THR THR A . n A 1 510 ILE 510 525 525 ILE ILE A . n A 1 511 GLY 511 526 526 GLY GLY A . n A 1 512 VAL 512 527 527 VAL VAL A . n A 1 513 PHE 513 528 528 PHE PHE A . n A 1 514 MET 514 529 529 MET MET A . n A 1 515 VAL 515 530 530 VAL VAL A . n A 1 516 LEU 516 531 531 LEU LEU A . n A 1 517 GLN 517 532 532 GLN GLN A . n A 1 518 SER 518 533 533 SER SER A . n A 1 519 ILE 519 534 534 ILE ILE A . n A 1 520 ALA 520 535 535 ALA ALA A . n A 1 521 SER 521 536 536 SER SER A . n A 1 522 ALA 522 537 537 ALA ALA A . n A 1 523 THR 523 538 538 THR THR A . n A 1 524 TYR 524 539 539 TYR TYR A . n A 1 525 HIS 525 540 540 HIS HIS A . n A 1 526 ILE 526 541 541 ILE ILE A . n A 1 527 CYS 527 542 542 CYS CYS A . n A 1 528 PRO 528 543 543 PRO PRO A . n A 1 529 SER 529 544 544 SER SER A . n A 1 530 ASP 530 545 545 ASP ASP A . n A 1 531 VAL 531 546 546 VAL VAL A . n A 1 532 ALA 532 547 547 ALA ALA A . n A 1 533 PHE 533 548 548 PHE PHE A . n A 1 534 GLN 534 549 549 GLN GLN A . n A 1 535 PHE 535 550 550 PHE PHE A . n A 1 536 ASP 536 551 551 ASP ASP A . n A 1 537 THR 537 552 552 THR THR A . n A 1 538 PRO 538 553 553 PRO PRO A . n A 1 539 CYS 539 554 554 CYS CYS A . n A 1 540 ILE 540 555 555 ILE ILE A . n A 1 541 GLN 541 556 556 GLN GLN A . n A 1 542 VAL 542 557 557 VAL VAL A . n A 1 543 ILE 543 558 558 ILE ILE A . n A 1 544 CYS 544 559 559 CYS CYS A . n A 1 545 GLY 545 560 560 GLY GLY A . n A 1 546 LEU 546 561 561 LEU LEU A . n A 1 547 LEU 547 562 562 LEU LEU A . n A 1 548 MET 548 563 563 MET MET A . n A 1 549 VAL 549 564 564 VAL VAL A . n A 1 550 ARG 550 565 565 ARG ARG A . n A 1 551 GLN 551 566 566 GLN GLN A . n A 1 552 TRP 552 567 567 TRP TRP A . n A 1 553 PHE 553 568 568 PHE PHE A . n A 1 554 VAL 554 569 569 VAL VAL A . n A 1 555 ARG 555 570 570 ARG ARG A . n A 1 556 HIS 556 571 571 HIS HIS A . n A 1 557 GLU 557 572 572 GLU GLU A . n A 1 558 SER 558 573 573 SER SER A . n A 1 559 PRO 559 574 574 PRO PRO A . n A 1 560 SER 560 575 575 SER SER A . n A 1 561 PRO 561 576 576 PRO PRO A . n A 1 562 ALA 562 577 577 ALA ALA A . n A 1 563 TYR 563 578 578 TYR TYR A . n A 1 564 THR 564 579 579 THR THR A . n A 1 565 ASN 565 580 580 ASN ASN A . n A 1 566 ILE 566 581 581 ILE ILE A . n A 1 567 LEU 567 582 582 LEU LEU A . n A 1 568 LEU 568 583 583 LEU LEU A . n A 1 569 VAL 569 584 584 VAL VAL A . n A 1 570 GLY 570 585 585 GLY GLY A . n A 1 571 VAL 571 586 586 VAL VAL A . n A 1 572 VAL 572 587 587 VAL VAL A . n A 1 573 SER 573 588 588 SER SER A . n A 1 574 LEU 574 589 589 LEU LEU A . n A 1 575 ASN 575 590 590 ASN ASN A . n A 1 576 PHE 576 591 591 PHE PHE A . n A 1 577 LEU 577 592 592 LEU LEU A . n A 1 578 ILE 578 593 593 ILE ILE A . n A 1 579 SER 579 594 594 SER SER A . n A 1 580 ALA 580 595 595 ALA ALA A . n A 1 581 PHE 581 596 596 PHE PHE A . n A 1 582 SER 582 597 597 SER SER A . n A 1 583 LYS 583 598 598 LYS LYS A . n A 1 584 THR 584 599 599 THR THR A . n A 1 585 SER 585 600 600 SER SER A . n A 1 586 TYR 586 601 601 TYR TYR A . n A 1 587 VAL 587 602 602 VAL VAL A . n A 1 588 ARG 588 603 603 ARG ARG A . n A 1 589 PHE 589 604 604 PHE PHE A . n A 1 590 ILE 590 605 605 ILE ILE A . n A 1 591 ILE 591 606 606 ILE ILE A . n A 1 592 ALA 592 607 607 ALA ALA A . n A 1 593 VAL 593 608 608 VAL VAL A . n A 1 594 ILE 594 609 609 ILE ILE A . n A 1 595 HIS 595 610 610 HIS HIS A . n A 1 596 VAL 596 611 611 VAL VAL A . n A 1 597 ILE 597 612 612 ILE ILE A . n A 1 598 VAL 598 613 613 VAL VAL A . n A 1 599 VAL 599 614 614 VAL VAL A . n A 1 600 GLY 600 615 615 GLY GLY A . n A 1 601 SER 601 616 616 SER SER A . n A 1 602 ILE 602 617 617 ILE ILE A . n A 1 603 CYS 603 618 618 CYS CYS A . n A 1 604 LEU 604 619 619 LEU LEU A . n A 1 605 ALA 605 620 620 ALA ALA A . n A 1 606 LYS 606 621 621 LYS LYS A . n A 1 607 GLU 607 622 622 GLU GLU A . n A 1 608 ARG 608 623 623 ARG ARG A . n A 1 609 SER 609 624 624 SER SER A . n A 1 610 LEU 610 625 ? ? ? A . n A 1 611 GLY 611 626 ? ? ? A . n A 1 612 SER 612 627 ? ? ? A . n A 1 613 GLU 613 628 ? ? ? A . n A 1 614 LYS 614 629 ? ? ? A . n A 1 615 LEU 615 630 630 LEU LEU A . n A 1 616 LYS 616 631 631 LYS LYS A . n A 1 617 THR 617 632 632 THR THR A . n A 1 618 ARG 618 633 633 ARG ARG A . n A 1 619 PHE 619 634 634 PHE PHE A . n A 1 620 PHE 620 635 635 PHE PHE A . n A 1 621 ILE 621 636 636 ILE ILE A . n A 1 622 MET 622 637 637 MET MET A . n A 1 623 ALA 623 638 638 ALA ALA A . n A 1 624 PHE 624 639 639 PHE PHE A . n A 1 625 SER 625 640 640 SER SER A . n A 1 626 MET 626 641 641 MET MET A . n A 1 627 GLY 627 642 642 GLY GLY A . n A 1 628 ASN 628 643 643 ASN ASN A . n A 1 629 PHE 629 644 644 PHE PHE A . n A 1 630 ALA 630 645 645 ALA ALA A . n A 1 631 ALA 631 646 646 ALA ALA A . n A 1 632 ILE 632 647 647 ILE ILE A . n A 1 633 VAL 633 648 648 VAL VAL A . n A 1 634 MET 634 649 649 MET MET A . n A 1 635 TYR 635 650 650 TYR TYR A . n A 1 636 LEU 636 651 651 LEU LEU A . n A 1 637 THR 637 652 652 THR THR A . n A 1 638 LEU 638 653 653 LEU LEU A . n A 1 639 SER 639 654 654 SER SER A . n A 1 640 ALA 640 655 655 ALA ALA A . n A 1 641 PHE 641 656 656 PHE PHE A . n A 1 642 HIS 642 657 657 HIS HIS A . n A 1 643 LEU 643 658 658 LEU LEU A . n A 1 644 ASN 644 659 659 ASN ASN A . n A 1 645 GLN 645 660 660 GLN GLN A . n A 1 646 ILE 646 661 661 ILE ILE A . n A 1 647 ALA 647 662 662 ALA ALA A . n A 1 648 THR 648 663 663 THR THR A . n A 1 649 TYR 649 664 664 TYR TYR A . n A 1 650 CYS 650 665 665 CYS CYS A . n A 1 651 PHE 651 666 666 PHE PHE A . n A 1 652 ILE 652 667 667 ILE ILE A . n A 1 653 ILE 653 668 668 ILE ILE A . n A 1 654 ASN 654 669 669 ASN ASN A . n A 1 655 CYS 655 670 670 CYS CYS A . n A 1 656 ILE 656 671 671 ILE ILE A . n A 1 657 MET 657 672 672 MET MET A . n A 1 658 TYR 658 673 673 TYR TYR A . n A 1 659 LEU 659 674 674 LEU LEU A . n A 1 660 MET 660 675 675 MET MET A . n A 1 661 TYR 661 676 676 TYR TYR A . n A 1 662 TYR 662 677 677 TYR TYR A . n A 1 663 GLY 663 678 678 GLY GLY A . n A 1 664 CYS 664 679 679 CYS CYS A . n A 1 665 MET 665 680 680 MET MET A . n A 1 666 LYS 666 681 681 LYS LYS A . n A 1 667 VAL 667 682 682 VAL VAL A . n A 1 668 LEU 668 683 683 LEU LEU A . n A 1 669 HIS 669 684 684 HIS HIS A . n A 1 670 SER 670 685 685 SER SER A . n A 1 671 GLU 671 686 686 GLU GLU A . n A 1 672 ARG 672 687 687 ARG ARG A . n A 1 673 ILE 673 688 688 ILE ILE A . n A 1 674 THR 674 689 689 THR THR A . n A 1 675 SER 675 690 690 SER SER A . n A 1 676 LYS 676 691 691 LYS LYS A . n A 1 677 ALA 677 692 692 ALA ALA A . n A 1 678 LYS 678 693 693 LYS LYS A . n A 1 679 LEU 679 694 694 LEU LEU A . n A 1 680 CYS 680 695 695 CYS CYS A . n A 1 681 GLY 681 696 696 GLY GLY A . n A 1 682 ALA 682 697 697 ALA ALA A . n A 1 683 LEU 683 698 698 LEU LEU A . n A 1 684 SER 684 699 699 SER SER A . n A 1 685 LEU 685 700 700 LEU LEU A . n A 1 686 LEU 686 701 701 LEU LEU A . n A 1 687 ALA 687 702 702 ALA ALA A . n A 1 688 TRP 688 703 703 TRP TRP A . n A 1 689 ALA 689 704 704 ALA ALA A . n A 1 690 VAL 690 705 705 VAL VAL A . n A 1 691 ALA 691 706 706 ALA ALA A . n A 1 692 GLY 692 707 707 GLY GLY A . n A 1 693 PHE 693 708 708 PHE PHE A . n A 1 694 PHE 694 709 709 PHE PHE A . n A 1 695 PHE 695 710 710 PHE PHE A . n A 1 696 PHE 696 711 711 PHE PHE A . n A 1 697 GLN 697 712 712 GLN GLN A . n A 1 698 ASP 698 713 713 ASP ASP A . n A 1 699 ASP 699 714 714 ASP ASP A . n A 1 700 THR 700 715 715 THR THR A . n A 1 701 ASP 701 716 716 ASP ASP A . n A 1 702 TRP 702 717 717 TRP TRP A . n A 1 703 THR 703 718 718 THR THR A . n A 1 704 ARG 704 719 719 ARG ARG A . n A 1 705 SER 705 720 720 SER SER A . n A 1 706 ALA 706 721 721 ALA ALA A . n A 1 707 ALA 707 722 722 ALA ALA A . n A 1 708 ALA 708 723 723 ALA ALA A . n A 1 709 SER 709 724 724 SER SER A . n A 1 710 ARG 710 725 725 ARG ARG A . n A 1 711 ALA 711 726 726 ALA ALA A . n A 1 712 LEU 712 727 727 LEU LEU A . n A 1 713 ASN 713 728 728 ASN ASN A . n A 1 714 LYS 714 729 729 LYS LYS A . n A 1 715 PRO 715 730 730 PRO PRO A . n A 1 716 CYS 716 731 731 CYS CYS A . n A 1 717 LEU 717 732 732 LEU LEU A . n A 1 718 LEU 718 733 733 LEU LEU A . n A 1 719 LEU 719 734 734 LEU LEU A . n A 1 720 GLY 720 735 735 GLY GLY A . n A 1 721 PHE 721 736 736 PHE PHE A . n A 1 722 PHE 722 737 737 PHE PHE A . n A 1 723 GLY 723 738 738 GLY GLY A . n A 1 724 SER 724 739 739 SER SER A . n A 1 725 HIS 725 740 740 HIS HIS A . n A 1 726 ASP 726 741 741 ASP ASP A . n A 1 727 LEU 727 742 742 LEU LEU A . n A 1 728 TRP 728 743 743 TRP TRP A . n A 1 729 HIS 729 744 744 HIS HIS A . n A 1 730 ILE 730 745 745 ILE ILE A . n A 1 731 PHE 731 746 746 PHE PHE A . n A 1 732 GLY 732 747 747 GLY GLY A . n A 1 733 ALA 733 748 748 ALA ALA A . n A 1 734 LEU 734 749 749 LEU LEU A . n A 1 735 ALA 735 750 750 ALA ALA A . n A 1 736 GLY 736 751 751 GLY GLY A . n A 1 737 LEU 737 752 752 LEU LEU A . n A 1 738 PHE 738 753 753 PHE PHE A . n A 1 739 THR 739 754 754 THR THR A . n A 1 740 PHE 740 755 755 PHE PHE A . n A 1 741 ILE 741 756 756 ILE ILE A . n A 1 742 PHE 742 757 757 PHE PHE A . n A 1 743 VAL 743 758 758 VAL VAL A . n A 1 744 SER 744 759 759 SER SER A . n A 1 745 PHE 745 760 760 PHE PHE A . n A 1 746 VAL 746 761 761 VAL VAL A . n A 1 747 ASP 747 762 762 ASP ASP A . n A 1 748 ASP 748 763 763 ASP ASP A . n A 1 749 ASP 749 764 764 ASP ASP A . n A 1 750 LEU 750 765 765 LEU LEU A . n A 1 751 ILE 751 766 766 ILE ILE A . n A 1 752 ASN 752 767 767 ASN ASN A . n A 1 753 THR 753 768 768 THR THR A . n A 1 754 ARG 754 769 769 ARG ARG A . n A 1 755 LYS 755 770 770 LYS LYS A . n A 1 756 THR 756 771 771 THR THR A . n A 1 757 SER 757 772 772 SER SER A . n A 1 758 ILE 758 773 773 ILE ILE A . n A 1 759 ASN 759 774 774 ASN ASN A . n A 1 760 ILE 760 775 775 ILE ILE A . n A 1 761 PHE 761 776 776 PHE PHE A . n B 2 1 A 1 1 1 A A C . n B 2 2 A 2 2 2 A A C . n B 2 3 A 3 3 3 A A C . n B 2 4 A 4 4 4 A A C . n B 2 5 A 5 5 5 A A C . n B 2 6 A 6 6 6 A A C . n B 2 7 A 7 7 7 A A C . n B 2 8 A 8 8 8 A A C . n B 2 9 A 9 9 9 A A C . n B 2 10 A 10 10 10 A A C . n B 2 11 A 11 11 11 A A C . n C 3 1 U 1 1 1 U U D . n C 3 2 U 2 2 2 U U D . n C 3 3 U 3 3 3 U U D . n C 3 4 U 4 4 4 U U D . n C 3 5 U 5 5 5 U U D . n C 3 6 U 6 6 6 U U D . n C 3 7 U 7 7 7 U U D . n C 3 8 U 8 8 8 U U D . n C 3 9 U 9 9 9 U U D . n C 3 10 U 10 10 10 U U D . n C 3 11 U 11 11 11 U U D . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 B NAG 1 A NAG 1001 n D 4 NAG 2 B NAG 2 A NAG 1002 n E 4 NAG 1 E NAG 1 A NAG 1004 n E 4 NAG 2 E NAG 2 A NAG 1005 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 NAG 1 801 1003 NAG NAG A . G 6 ZN 1 802 1101 ZN ZN A . H 7 Y01 1 803 1102 Y01 Y01 A . I 8 LBN 1 804 1103 LBN LBN A . J 8 LBN 1 805 1104 LBN LBN A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 511 ? CG ? A HIS 496 CG 2 1 Y 1 A HIS 511 ? ND1 ? A HIS 496 ND1 3 1 Y 1 A HIS 511 ? CD2 ? A HIS 496 CD2 4 1 Y 1 A HIS 511 ? CE1 ? A HIS 496 CE1 5 1 Y 1 A HIS 511 ? NE2 ? A HIS 496 NE2 6 1 N 1 A LBN 804 ? N1 ? I LBN 1 N1 7 1 N 1 A LBN 804 ? P1 ? I LBN 1 P1 8 1 N 1 A LBN 804 ? C3 ? I LBN 1 C3 9 1 N 1 A LBN 804 ? C4 ? I LBN 1 C4 10 1 N 1 A LBN 804 ? C6 ? I LBN 1 C6 11 1 N 1 A LBN 804 ? O1 ? I LBN 1 O1 12 1 N 1 A LBN 804 ? C7 ? I LBN 1 C7 13 1 N 1 A LBN 804 ? C9 ? I LBN 1 C9 14 1 N 1 A LBN 804 ? O2 ? I LBN 1 O2 15 1 N 1 A LBN 804 ? C10 ? I LBN 1 C10 16 1 N 1 A LBN 804 ? C12 ? I LBN 1 C12 17 1 N 1 A LBN 804 ? O3 ? I LBN 1 O3 18 1 N 1 A LBN 804 ? C13 ? I LBN 1 C13 19 1 N 1 A LBN 804 ? C15 ? I LBN 1 C15 20 1 N 1 A LBN 804 ? O4 ? I LBN 1 O4 21 1 N 1 A LBN 804 ? C16 ? I LBN 1 C16 22 1 N 1 A LBN 804 ? C18 ? I LBN 1 C18 23 1 N 1 A LBN 804 ? C19 ? I LBN 1 C19 24 1 N 1 A LBN 804 ? C21 ? I LBN 1 C21 25 1 N 1 A LBN 804 ? C23 ? I LBN 1 C23 26 1 N 1 A LBN 804 ? C24 ? I LBN 1 C24 27 1 N 1 A LBN 804 ? C25 ? I LBN 1 C25 28 1 N 1 A LBN 804 ? O5 ? I LBN 1 O5 29 1 N 1 A LBN 804 ? C26 ? I LBN 1 C26 30 1 N 1 A LBN 804 ? O6 ? I LBN 1 O6 31 1 N 1 A LBN 804 ? C27 ? I LBN 1 C27 32 1 N 1 A LBN 804 ? C28 ? I LBN 1 C28 33 1 N 1 A LBN 804 ? C29 ? I LBN 1 C29 34 1 N 1 A LBN 804 ? C30 ? I LBN 1 C30 35 1 N 1 A LBN 804 ? C31 ? I LBN 1 C31 36 1 N 1 A LBN 804 ? C32 ? I LBN 1 C32 37 1 N 1 A LBN 804 ? C33 ? I LBN 1 C33 38 1 N 1 A LBN 805 ? N1 ? J LBN 1 N1 39 1 N 1 A LBN 805 ? P1 ? J LBN 1 P1 40 1 N 1 A LBN 805 ? C3 ? J LBN 1 C3 41 1 N 1 A LBN 805 ? C4 ? J LBN 1 C4 42 1 N 1 A LBN 805 ? C6 ? J LBN 1 C6 43 1 N 1 A LBN 805 ? O1 ? J LBN 1 O1 44 1 N 1 A LBN 805 ? C7 ? J LBN 1 C7 45 1 N 1 A LBN 805 ? C9 ? J LBN 1 C9 46 1 N 1 A LBN 805 ? O2 ? J LBN 1 O2 47 1 N 1 A LBN 805 ? C10 ? J LBN 1 C10 48 1 N 1 A LBN 805 ? C12 ? J LBN 1 C12 49 1 N 1 A LBN 805 ? O3 ? J LBN 1 O3 50 1 N 1 A LBN 805 ? C13 ? J LBN 1 C13 51 1 N 1 A LBN 805 ? C15 ? J LBN 1 C15 52 1 N 1 A LBN 805 ? O4 ? J LBN 1 O4 53 1 N 1 A LBN 805 ? C16 ? J LBN 1 C16 54 1 N 1 A LBN 805 ? C18 ? J LBN 1 C18 55 1 N 1 A LBN 805 ? C19 ? J LBN 1 C19 56 1 N 1 A LBN 805 ? C21 ? J LBN 1 C21 57 1 N 1 A LBN 805 ? C23 ? J LBN 1 C23 58 1 N 1 A LBN 805 ? C24 ? J LBN 1 C24 59 1 N 1 A LBN 805 ? C25 ? J LBN 1 C25 60 1 N 1 A LBN 805 ? O5 ? J LBN 1 O5 61 1 N 1 A LBN 805 ? C26 ? J LBN 1 C26 62 1 N 1 A LBN 805 ? O6 ? J LBN 1 O6 63 1 N 1 A LBN 805 ? C27 ? J LBN 1 C27 64 1 N 1 A LBN 805 ? C28 ? J LBN 1 C28 65 1 N 1 A LBN 805 ? C29 ? J LBN 1 C29 66 1 N 1 A LBN 805 ? C30 ? J LBN 1 C30 67 1 N 1 A LBN 805 ? C31 ? J LBN 1 C31 68 1 N 1 A LBN 805 ? C32 ? J LBN 1 C32 69 1 N 1 A LBN 805 ? C33 ? J LBN 1 C33 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9L8M _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9L8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9L8M _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9L8M _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0170477655 ? 5853 ? s_bond_nonh_d 0.0122056381 ? 'ELECTRON MICROSCOPY' ? 1.82320166 ? 7997 ? s_angle_nonh_d 1.61007253 ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.vector[2] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given 1 0 0 0 0 1 0 0 0 0 1 0 ? 2 generate -1 0 0 232.39999 0 -1 0 232.39999 0 0 1 0 ? # _struct.entry_id 9L8M _struct.title 'Structure of SID-1 in complex with dsRNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9L8M _struct_keywords.text 'dsRNA, Membrane protein, Complex, MEMBRANE PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SID1_CAEEL Q9GZC8 ? 1 ;QNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLRLELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVS NGRDSFLLKLPTVYPNLKLYTDGKLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDF LKFKTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDRSVISDKTHNRRVLSFTK RADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVI NIIKNSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKI PLKQDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAIFI VLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPA YTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFH LNQIATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLGFF GSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF ; 18 2 PDB 9L8M 9L8M ? 2 ? 1 3 PDB 9L8M 9L8M ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9L8M A 3 ? 761 ? Q9GZC8 18 ? 776 ? 18 776 2 2 9L8M C 1 ? 11 ? 9L8M 1 ? 11 ? 1 11 3 3 9L8M D 1 ? 11 ? 9L8M 1 ? 11 ? 1 11 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9L8M GLY A 1 ? UNP Q9GZC8 ? ? 'expression tag' 16 1 1 9L8M PRO A 2 ? UNP Q9GZC8 ? ? 'expression tag' 17 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J 1 2 A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? -1.0 0.0 0.0 232.39999 0.0 -1.0 0.0 232.39999 0.0 0.0 1.0 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 49 ? ILE A 53 ? ASP A 64 ILE A 68 5 ? 5 HELX_P HELX_P2 AA2 ASP A 65 ? SER A 70 ? ASP A 80 SER A 85 5 ? 6 HELX_P HELX_P3 AA3 VAL A 112 ? PHE A 116 ? VAL A 127 PHE A 131 5 ? 5 HELX_P HELX_P4 AA4 ASP A 156 ? ASP A 161 ? ASP A 171 ASP A 176 1 ? 6 HELX_P HELX_P5 AA5 CYS A 191 ? ASN A 195 ? CYS A 206 ASN A 210 1 ? 5 HELX_P HELX_P6 AA6 THR A 249 ? LYS A 257 ? THR A 264 LYS A 272 1 ? 9 HELX_P HELX_P7 AA7 TYR A 299 ? THR A 312 ? TYR A 314 THR A 327 1 ? 14 HELX_P HELX_P8 AA8 PRO A 313 ? LEU A 316 ? PRO A 328 LEU A 331 5 ? 4 HELX_P HELX_P9 AA9 PHE A 317 ? ASN A 327 ? PHE A 332 ASN A 342 1 ? 11 HELX_P HELX_P10 AB1 GLN A 414 ? TYR A 418 ? GLN A 429 TYR A 433 1 ? 5 HELX_P HELX_P11 AB2 PRO A 419 ? ILE A 422 ? PRO A 434 ILE A 437 5 ? 4 HELX_P HELX_P12 AB3 ILE A 423 ? SER A 440 ? ILE A 438 SER A 455 1 ? 18 HELX_P HELX_P13 AB4 THR A 441 ? CYS A 449 ? THR A 456 CYS A 464 1 ? 9 HELX_P HELX_P14 AB5 ALA A 464 ? ASN A 471 ? ALA A 479 ASN A 486 1 ? 8 HELX_P HELX_P15 AB6 ASN A 471 ? ARG A 489 ? ASN A 486 ARG A 504 1 ? 19 HELX_P HELX_P16 AB7 CYS A 503 ? HIS A 525 ? CYS A 518 HIS A 540 1 ? 23 HELX_P HELX_P17 AB8 THR A 537 ? VAL A 554 ? THR A 552 VAL A 569 1 ? 18 HELX_P HELX_P18 AB9 SER A 560 ? ALA A 562 ? SER A 575 ALA A 577 5 ? 3 HELX_P HELX_P19 AC1 TYR A 563 ? PHE A 581 ? TYR A 578 PHE A 596 1 ? 19 HELX_P HELX_P20 AC2 TYR A 586 ? SER A 609 ? TYR A 601 SER A 624 1 ? 24 HELX_P HELX_P21 AC3 LYS A 616 ? LEU A 638 ? LYS A 631 LEU A 653 1 ? 23 HELX_P HELX_P22 AC4 ASN A 644 ? HIS A 669 ? ASN A 659 HIS A 684 1 ? 26 HELX_P HELX_P23 AC5 THR A 674 ? ASP A 698 ? THR A 689 ASP A 713 1 ? 25 HELX_P HELX_P24 AC6 SER A 705 ? ARG A 710 ? SER A 720 ARG A 725 1 ? 6 HELX_P HELX_P25 AC7 GLY A 723 ? ASP A 747 ? GLY A 738 ASP A 762 1 ? 25 HELX_P HELX_P26 AC8 ASP A 748 ? ILE A 751 ? ASP A 763 ILE A 766 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 210 SG ? ? ? 1_555 A CYS 272 SG ? ? A CYS 225 A CYS 287 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 449 SG ? ? ? 1_555 A CYS 527 SG ? ? A CYS 464 A CYS 542 1_555 ? ? ? ? ? ? ? 2.065 ? ? disulf3 disulf ? ? A CYS 455 SG ? ? ? 1_555 A CYS 716 SG ? ? A CYS 470 A CYS 731 1_555 ? ? ? ? ? ? ? 2.111 ? ? covale1 covale one ? A ASN 190 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 205 B NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale2 covale one ? A ASN 195 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 210 A NAG 801 1_555 ? ? ? ? ? ? ? 1.422 ? N-Glycosylation covale3 covale one ? A ASN 219 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 234 E NAG 1 1_555 ? ? ? ? ? ? ? 1.423 ? N-Glycosylation covale4 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.408 ? ? covale5 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.419 ? ? metalc1 metalc ? ? A HIS 525 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 540 A ZN 802 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc2 metalc ? ? A ASP 536 OD1 ? ? ? 1_555 G ZN . ZN ? ? A ASP 551 A ZN 802 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc3 metalc ? ? A ASP 536 OD2 ? ? ? 1_555 G ZN . ZN ? ? A ASP 551 A ZN 802 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc4 metalc ? ? A HIS 725 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 740 A ZN 802 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc5 metalc ? ? A HIS 729 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 744 A ZN 802 1_555 ? ? ? ? ? ? ? 2.233 ? ? hydrog1 hydrog ? ? B A 1 N1 ? ? ? 1_555 C U 11 N3 ? ? C A 1 D U 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B A 1 N6 ? ? ? 1_555 C U 11 O4 ? ? C A 1 D U 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B A 2 N1 ? ? ? 1_555 C U 10 N3 ? ? C A 2 D U 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B A 2 N6 ? ? ? 1_555 C U 10 O4 ? ? C A 2 D U 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B A 3 N1 ? ? ? 1_555 C U 9 N3 ? ? C A 3 D U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B A 3 N6 ? ? ? 1_555 C U 9 O4 ? ? C A 3 D U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B A 3 N1 ? ? ? 1_555 C U 10 N3 ? ? C A 3 D U 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B A 3 N6 ? ? ? 1_555 C U 10 O4 ? ? C A 3 D U 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B A 4 N1 ? ? ? 1_555 C U 8 N3 ? ? C A 4 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B A 4 N6 ? ? ? 1_555 C U 8 O4 ? ? C A 4 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B A 5 N1 ? ? ? 1_555 C U 7 N3 ? ? C A 5 D U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B A 5 N6 ? ? ? 1_555 C U 7 O4 ? ? C A 5 D U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 6 N1 ? ? ? 1_555 C U 6 N3 ? ? C A 6 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 6 N6 ? ? ? 1_555 C U 6 O4 ? ? C A 6 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B A 7 N1 ? ? ? 1_555 C U 5 N3 ? ? C A 7 D U 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B A 7 N6 ? ? ? 1_555 C U 5 O4 ? ? C A 7 D U 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B A 8 N1 ? ? ? 1_555 C U 4 N3 ? ? C A 8 D U 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B A 8 N6 ? ? ? 1_555 C U 4 O4 ? ? C A 8 D U 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B A 9 N1 ? ? ? 1_555 C U 3 N3 ? ? C A 9 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B A 9 N6 ? ? ? 1_555 C U 3 O4 ? ? C A 9 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B A 10 N1 ? ? ? 1_555 C U 2 N3 ? ? C A 10 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B A 10 N6 ? ? ? 1_555 C U 2 O4 ? ? C A 10 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B A 11 N1 ? ? ? 1_555 C U 1 N3 ? ? C A 11 D U 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B A 11 N6 ? ? ? 1_555 C U 1 O4 ? ? C A 11 D U 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 525 ? A HIS 540 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 OD1 ? A ASP 536 ? A ASP 551 ? 1_555 94.3 ? 2 NE2 ? A HIS 525 ? A HIS 540 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 OD2 ? A ASP 536 ? A ASP 551 ? 1_555 141.7 ? 3 OD1 ? A ASP 536 ? A ASP 551 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 OD2 ? A ASP 536 ? A ASP 551 ? 1_555 55.3 ? 4 NE2 ? A HIS 525 ? A HIS 540 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 725 ? A HIS 740 ? 1_555 82.2 ? 5 OD1 ? A ASP 536 ? A ASP 551 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 725 ? A HIS 740 ? 1_555 156.4 ? 6 OD2 ? A ASP 536 ? A ASP 551 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 725 ? A HIS 740 ? 1_555 115.7 ? 7 NE2 ? A HIS 525 ? A HIS 540 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 729 ? A HIS 744 ? 1_555 84.9 ? 8 OD1 ? A ASP 536 ? A ASP 551 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 729 ? A HIS 744 ? 1_555 122.2 ? 9 OD2 ? A ASP 536 ? A ASP 551 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 729 ? A HIS 744 ? 1_555 129.4 ? 10 NE2 ? A HIS 725 ? A HIS 740 ? 1_555 ZN ? G ZN . ? A ZN 802 ? 1_555 NE2 ? A HIS 729 ? A HIS 744 ? 1_555 80.9 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN A 190 ? NAG B 1 ? 1_555 ASN A 205 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG E . ? ASN A 219 ? NAG E 1 ? 1_555 ASN A 234 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG F . ? ASN A 195 ? NAG A 801 ? 1_555 ASN A 210 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 CYS A 210 ? CYS A 272 ? CYS A 225 ? 1_555 CYS A 287 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 449 ? CYS A 527 ? CYS A 464 ? 1_555 CYS A 542 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 455 ? CYS A 716 ? CYS A 470 ? 1_555 CYS A 731 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 92 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 107 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 93 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 108 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 20 ? GLU A 24 ? VAL A 35 GLU A 39 AA1 2 VAL A 41 ? LEU A 48 ? VAL A 56 LEU A 63 AA1 3 GLN A 132 ? GLN A 139 ? GLN A 147 GLN A 154 AA1 4 LEU A 77 ? SER A 82 ? LEU A 92 SER A 97 AA1 5 SER A 87 ? LEU A 92 ? SER A 102 LEU A 107 AA2 1 MET A 31 ? LEU A 36 ? MET A 46 LEU A 51 AA2 2 ILE A 146 ? LEU A 155 ? ILE A 161 LEU A 170 AA2 3 LEU A 56 ? ILE A 63 ? LEU A 71 ILE A 78 AA2 4 THR A 103 ? LEU A 108 ? THR A 118 LEU A 123 AA3 1 THR A 94 ? VAL A 95 ? THR A 109 VAL A 110 AA3 2 LYS A 100 ? LEU A 101 ? LYS A 115 LEU A 116 AA4 1 THR A 171 ? LEU A 179 ? THR A 186 LEU A 194 AA4 2 LYS A 285 ? LEU A 294 ? LYS A 300 LEU A 309 AA4 3 GLN A 198 ? SER A 205 ? GLN A 213 SER A 220 AA4 4 ARG A 243 ? PHE A 248 ? ARG A 258 PHE A 263 AA5 1 ILE A 185 ? ASN A 190 ? ILE A 200 ASN A 205 AA5 2 SER A 258 ? ILE A 265 ? SER A 273 ILE A 280 AA5 3 ALA A 211 ? PRO A 217 ? ALA A 226 PRO A 232 AA5 4 ARG A 236 ? PHE A 240 ? ARG A 251 PHE A 255 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 21 ? N LEU A 36 O VAL A 41 ? O VAL A 56 AA1 2 3 N LEU A 44 ? N LEU A 59 O VAL A 136 ? O VAL A 151 AA1 3 4 O GLN A 139 ? O GLN A 154 N GLU A 78 ? N GLU A 93 AA1 4 5 N VAL A 79 ? N VAL A 94 O LEU A 90 ? O LEU A 105 AA2 1 2 N LEU A 36 ? N LEU A 51 O ILE A 146 ? O ILE A 161 AA2 2 3 O THR A 153 ? O THR A 168 N LYS A 58 ? N LYS A 73 AA2 3 4 N THR A 57 ? N THR A 72 O LEU A 108 ? O LEU A 123 AA3 1 2 N THR A 94 ? N THR A 109 O LEU A 101 ? O LEU A 116 AA4 1 2 N LEU A 174 ? N LEU A 189 O PHE A 289 ? O PHE A 304 AA4 2 3 O LYS A 292 ? O LYS A 307 N HIS A 200 ? N HIS A 215 AA4 3 4 N PHE A 199 ? N PHE A 214 O PHE A 248 ? O PHE A 263 AA5 1 2 N LEU A 189 ? N LEU A 204 O PHE A 259 ? O PHE A 274 AA5 2 3 O PHE A 262 ? O PHE A 277 N ILE A 214 ? N ILE A 229 AA5 3 4 N LEU A 213 ? N LEU A 228 O LEU A 238 ? O LEU A 253 # _pdbx_entry_details.entry_id 9L8M _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 250 ? ? CZ A ARG 250 ? ? NH1 A ARG 250 ? ? 123.52 120.30 3.22 0.50 N 2 1 NE A ARG 603 ? ? CZ A ARG 603 ? ? NH1 A ARG 603 ? ? 123.33 120.30 3.03 0.50 N 3 1 NE A ARG 719 ? ? CZ A ARG 719 ? ? NH1 A ARG 719 ? ? 116.82 120.30 -3.48 0.50 N 4 1 "C5'" D U 4 ? ? "C4'" D U 4 ? ? "O4'" D U 4 ? ? 115.67 109.80 5.87 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 176 ? ? -93.40 39.31 2 1 THR A 256 ? ? -134.08 -59.04 3 1 LYS A 272 ? ? 86.83 -12.47 4 1 SER A 288 ? ? 177.49 174.96 5 1 TYR A 314 ? ? -105.36 48.45 6 1 CYS A 518 ? ? -113.73 50.10 7 1 CYS A 542 ? ? -156.36 85.87 8 1 ASP A 716 ? ? -167.39 102.70 9 1 ASP A 762 ? ? -98.96 32.90 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ARG _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 156 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 LEU _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 157 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -148.60 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9L8M _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9L8M _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 227508 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'SID-1 in complex with dsRNA' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 9L8M _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9L8M _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9L8M _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9L8M _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 16 ? A GLY 1 2 1 Y 1 A PRO 17 ? A PRO 2 3 1 Y 1 A GLN 18 ? A GLN 3 4 1 Y 1 A ASN 19 ? A ASN 4 5 1 Y 1 A ASN 20 ? A ASN 5 6 1 Y 1 A SER 21 ? A SER 6 7 1 Y 1 A THR 22 ? A THR 7 8 1 Y 1 A THR 23 ? A THR 8 9 1 Y 1 A PRO 24 ? A PRO 9 10 1 Y 1 A SER 25 ? A SER 10 11 1 Y 1 A PRO 26 ? A PRO 11 12 1 Y 1 A ILE 27 ? A ILE 12 13 1 Y 1 A ILE 28 ? A ILE 13 14 1 Y 1 A THR 29 ? A THR 14 15 1 Y 1 A SER 30 ? A SER 15 16 1 Y 1 A SER 31 ? A SER 16 17 1 Y 1 A ASN 32 ? A ASN 17 18 1 Y 1 A SER 33 ? A SER 18 19 1 Y 1 A ALA 133 ? A ALA 118 20 1 Y 1 A HIS 134 ? A HIS 119 21 1 Y 1 A ARG 135 ? A ARG 120 22 1 Y 1 A LYS 136 ? A LYS 121 23 1 Y 1 A ARG 137 ? A ARG 122 24 1 Y 1 A HIS 138 ? A HIS 123 25 1 Y 1 A ARG 139 ? A ARG 124 26 1 Y 1 A ILE 140 ? A ILE 125 27 1 Y 1 A GLY 141 ? A GLY 126 28 1 Y 1 A ASP 142 ? A ASP 127 29 1 Y 1 A PRO 143 ? A PRO 128 30 1 Y 1 A ASN 290 ? A ASN 275 31 1 Y 1 A THR 291 ? A THR 276 32 1 Y 1 A SER 292 ? A SER 277 33 1 Y 1 A ARG 293 ? A ARG 278 34 1 Y 1 A LYS 294 ? A LYS 279 35 1 Y 1 A SER 343 ? A SER 328 36 1 Y 1 A ARG 344 ? A ARG 329 37 1 Y 1 A LYS 345 ? A LYS 330 38 1 Y 1 A LEU 346 ? A LEU 331 39 1 Y 1 A ALA 347 ? A ALA 332 40 1 Y 1 A PRO 348 ? A PRO 333 41 1 Y 1 A SER 349 ? A SER 334 42 1 Y 1 A GLN 350 ? A GLN 335 43 1 Y 1 A SER 351 ? A SER 336 44 1 Y 1 A ASN 352 ? A ASN 337 45 1 Y 1 A LEU 353 ? A LEU 338 46 1 Y 1 A ILE 354 ? A ILE 339 47 1 Y 1 A SER 355 ? A SER 340 48 1 Y 1 A PHE 356 ? A PHE 341 49 1 Y 1 A SER 357 ? A SER 342 50 1 Y 1 A PRO 358 ? A PRO 343 51 1 Y 1 A VAL 359 ? A VAL 344 52 1 Y 1 A PRO 360 ? A PRO 345 53 1 Y 1 A SER 361 ? A SER 346 54 1 Y 1 A GLU 362 ? A GLU 347 55 1 Y 1 A GLN 363 ? A GLN 348 56 1 Y 1 A ARG 364 ? A ARG 349 57 1 Y 1 A ASP 365 ? A ASP 350 58 1 Y 1 A MET 366 ? A MET 351 59 1 Y 1 A ASP 367 ? A ASP 352 60 1 Y 1 A LEU 368 ? A LEU 353 61 1 Y 1 A SER 369 ? A SER 354 62 1 Y 1 A HIS 370 ? A HIS 355 63 1 Y 1 A ASP 371 ? A ASP 356 64 1 Y 1 A GLU 372 ? A GLU 357 65 1 Y 1 A GLN 373 ? A GLN 358 66 1 Y 1 A GLN 374 ? A GLN 359 67 1 Y 1 A ASN 375 ? A ASN 360 68 1 Y 1 A THR 376 ? A THR 361 69 1 Y 1 A SER 377 ? A SER 362 70 1 Y 1 A SER 378 ? A SER 363 71 1 Y 1 A GLU 379 ? A GLU 364 72 1 Y 1 A LEU 380 ? A LEU 365 73 1 Y 1 A GLU 381 ? A GLU 366 74 1 Y 1 A ASN 382 ? A ASN 367 75 1 Y 1 A ASN 383 ? A ASN 368 76 1 Y 1 A GLY 384 ? A GLY 369 77 1 Y 1 A GLU 385 ? A GLU 370 78 1 Y 1 A ILE 386 ? A ILE 371 79 1 Y 1 A PRO 387 ? A PRO 372 80 1 Y 1 A ALA 388 ? A ALA 373 81 1 Y 1 A ALA 389 ? A ALA 374 82 1 Y 1 A GLU 390 ? A GLU 375 83 1 Y 1 A ASN 391 ? A ASN 376 84 1 Y 1 A GLN 392 ? A GLN 377 85 1 Y 1 A ILE 393 ? A ILE 378 86 1 Y 1 A VAL 394 ? A VAL 379 87 1 Y 1 A GLU 395 ? A GLU 380 88 1 Y 1 A GLU 396 ? A GLU 381 89 1 Y 1 A ILE 397 ? A ILE 382 90 1 Y 1 A THR 398 ? A THR 383 91 1 Y 1 A ALA 399 ? A ALA 384 92 1 Y 1 A GLU 400 ? A GLU 385 93 1 Y 1 A ASN 401 ? A ASN 386 94 1 Y 1 A GLN 402 ? A GLN 387 95 1 Y 1 A GLU 403 ? A GLU 388 96 1 Y 1 A THR 404 ? A THR 389 97 1 Y 1 A SER 405 ? A SER 390 98 1 Y 1 A VAL 406 ? A VAL 391 99 1 Y 1 A GLU 407 ? A GLU 392 100 1 Y 1 A GLU 408 ? A GLU 393 101 1 Y 1 A GLY 409 ? A GLY 394 102 1 Y 1 A ASN 410 ? A ASN 395 103 1 Y 1 A ARG 411 ? A ARG 396 104 1 Y 1 A GLU 412 ? A GLU 397 105 1 Y 1 A ILE 413 ? A ILE 398 106 1 Y 1 A GLN 414 ? A GLN 399 107 1 Y 1 A VAL 415 ? A VAL 400 108 1 Y 1 A LYS 416 ? A LYS 401 109 1 Y 1 A ILE 417 ? A ILE 402 110 1 Y 1 A PRO 418 ? A PRO 403 111 1 Y 1 A LEU 419 ? A LEU 404 112 1 Y 1 A LYS 420 ? A LYS 405 113 1 Y 1 A GLN 421 ? A GLN 406 114 1 Y 1 A ASP 422 ? A ASP 407 115 1 Y 1 A SER 423 ? A SER 408 116 1 Y 1 A LEU 424 ? A LEU 409 117 1 Y 1 A SER 425 ? A SER 410 118 1 Y 1 A LEU 426 ? A LEU 411 119 1 Y 1 A HIS 427 ? A HIS 412 120 1 Y 1 A GLY 505 ? A GLY 490 121 1 Y 1 A ARG 506 ? A ARG 491 122 1 Y 1 A HIS 507 ? A HIS 492 123 1 Y 1 A GLU 508 ? A GLU 493 124 1 Y 1 A TYR 509 ? A TYR 494 125 1 Y 1 A SER 510 ? A SER 495 126 1 Y 1 A LEU 625 ? A LEU 610 127 1 Y 1 A GLY 626 ? A GLY 611 128 1 Y 1 A SER 627 ? A SER 612 129 1 Y 1 A GLU 628 ? A GLU 613 130 1 Y 1 A LYS 629 ? A LYS 614 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 LBN C1 C N N 217 LBN N1 N N N 218 LBN P1 P N N 219 LBN C2 C N R 220 LBN C3 C N N 221 LBN C4 C N N 222 LBN C5 C N N 223 LBN C6 C N N 224 LBN O1 O N N 225 LBN C7 C N N 226 LBN C8 C N N 227 LBN C9 C N N 228 LBN O2 O N N 229 LBN C10 C N N 230 LBN C11 C N N 231 LBN C12 C N N 232 LBN O3 O N N 233 LBN C13 C N N 234 LBN C14 C N N 235 LBN C15 C N N 236 LBN O4 O N N 237 LBN C16 C N N 238 LBN C17 C N N 239 LBN C18 C N N 240 LBN C19 C N N 241 LBN C20 C N N 242 LBN C21 C N N 243 LBN C22 C N N 244 LBN C23 C N N 245 LBN C24 C N N 246 LBN C25 C N N 247 LBN O5 O N N 248 LBN C26 C N N 249 LBN O6 O N N 250 LBN C27 C N N 251 LBN C28 C N N 252 LBN C29 C N N 253 LBN C30 C N N 254 LBN C31 C N N 255 LBN C32 C N N 256 LBN C33 C N N 257 LBN C34 C N N 258 LBN O7 O N N 259 LBN C35 C N N 260 LBN O8 O N N 261 LBN C36 C N N 262 LBN C37 C N N 263 LBN C38 C N N 264 LBN C39 C N N 265 LBN C40 C N N 266 LBN C41 C N N 267 LBN C42 C N N 268 LBN H1 H N N 269 LBN H2 H N N 270 LBN H3 H N N 271 LBN H4 H N N 272 LBN H5 H N N 273 LBN H6 H N N 274 LBN H7 H N N 275 LBN H8 H N N 276 LBN H9 H N N 277 LBN H10 H N N 278 LBN H11 H N N 279 LBN H12 H N N 280 LBN H13 H N N 281 LBN H14 H N N 282 LBN H15 H N N 283 LBN H16 H N N 284 LBN H17 H N N 285 LBN H18 H N N 286 LBN H19 H N N 287 LBN H20 H N N 288 LBN H21 H N N 289 LBN H22 H N N 290 LBN H23 H N N 291 LBN H24 H N N 292 LBN H25 H N N 293 LBN H26 H N N 294 LBN H27 H N N 295 LBN H28 H N N 296 LBN H30 H N N 297 LBN H31 H N N 298 LBN H32 H N N 299 LBN H33 H N N 300 LBN H34 H N N 301 LBN H35 H N N 302 LBN H36 H N N 303 LBN H37 H N N 304 LBN H38 H N N 305 LBN H39 H N N 306 LBN H40 H N N 307 LBN H41 H N N 308 LBN H42 H N N 309 LBN H43 H N N 310 LBN H44 H N N 311 LBN H45 H N N 312 LBN H46 H N N 313 LBN H47 H N N 314 LBN H48 H N N 315 LBN H49 H N N 316 LBN H50 H N N 317 LBN H51 H N N 318 LBN H52 H N N 319 LBN H53 H N N 320 LBN H54 H N N 321 LBN H55 H N N 322 LBN H56 H N N 323 LBN H57 H N N 324 LBN H58 H N N 325 LBN H59 H N N 326 LBN H60 H N N 327 LBN H61 H N N 328 LBN H62 H N N 329 LBN H63 H N N 330 LBN H64 H N N 331 LBN H65 H N N 332 LBN H66 H N N 333 LBN H67 H N N 334 LBN H68 H N N 335 LBN H69 H N N 336 LBN H70 H N N 337 LBN H71 H N N 338 LBN H72 H N N 339 LBN H73 H N N 340 LBN H74 H N N 341 LBN H75 H N N 342 LBN H76 H N N 343 LBN H77 H N N 344 LBN H78 H N N 345 LBN H79 H N N 346 LBN H80 H N N 347 LBN H81 H N N 348 LBN H82 H N N 349 LBN H83 H N N 350 LEU N N N N 351 LEU CA C N S 352 LEU C C N N 353 LEU O O N N 354 LEU CB C N N 355 LEU CG C N N 356 LEU CD1 C N N 357 LEU CD2 C N N 358 LEU OXT O N N 359 LEU H H N N 360 LEU H2 H N N 361 LEU HA H N N 362 LEU HB2 H N N 363 LEU HB3 H N N 364 LEU HG H N N 365 LEU HD11 H N N 366 LEU HD12 H N N 367 LEU HD13 H N N 368 LEU HD21 H N N 369 LEU HD22 H N N 370 LEU HD23 H N N 371 LEU HXT H N N 372 LYS N N N N 373 LYS CA C N S 374 LYS C C N N 375 LYS O O N N 376 LYS CB C N N 377 LYS CG C N N 378 LYS CD C N N 379 LYS CE C N N 380 LYS NZ N N N 381 LYS OXT O N N 382 LYS H H N N 383 LYS H2 H N N 384 LYS HA H N N 385 LYS HB2 H N N 386 LYS HB3 H N N 387 LYS HG2 H N N 388 LYS HG3 H N N 389 LYS HD2 H N N 390 LYS HD3 H N N 391 LYS HE2 H N N 392 LYS HE3 H N N 393 LYS HZ1 H N N 394 LYS HZ2 H N N 395 LYS HZ3 H N N 396 LYS HXT H N N 397 MET N N N N 398 MET CA C N S 399 MET C C N N 400 MET O O N N 401 MET CB C N N 402 MET CG C N N 403 MET SD S N N 404 MET CE C N N 405 MET OXT O N N 406 MET H H N N 407 MET H2 H N N 408 MET HA H N N 409 MET HB2 H N N 410 MET HB3 H N N 411 MET HG2 H N N 412 MET HG3 H N N 413 MET HE1 H N N 414 MET HE2 H N N 415 MET HE3 H N N 416 MET HXT H N N 417 NAG C1 C N R 418 NAG C2 C N R 419 NAG C3 C N R 420 NAG C4 C N S 421 NAG C5 C N R 422 NAG C6 C N N 423 NAG C7 C N N 424 NAG C8 C N N 425 NAG N2 N N N 426 NAG O1 O N N 427 NAG O3 O N N 428 NAG O4 O N N 429 NAG O5 O N N 430 NAG O6 O N N 431 NAG O7 O N N 432 NAG H1 H N N 433 NAG H2 H N N 434 NAG H3 H N N 435 NAG H4 H N N 436 NAG H5 H N N 437 NAG H61 H N N 438 NAG H62 H N N 439 NAG H81 H N N 440 NAG H82 H N N 441 NAG H83 H N N 442 NAG HN2 H N N 443 NAG HO1 H N N 444 NAG HO3 H N N 445 NAG HO4 H N N 446 NAG HO6 H N N 447 PHE N N N N 448 PHE CA C N S 449 PHE C C N N 450 PHE O O N N 451 PHE CB C N N 452 PHE CG C Y N 453 PHE CD1 C Y N 454 PHE CD2 C Y N 455 PHE CE1 C Y N 456 PHE CE2 C Y N 457 PHE CZ C Y N 458 PHE OXT O N N 459 PHE H H N N 460 PHE H2 H N N 461 PHE HA H N N 462 PHE HB2 H N N 463 PHE HB3 H N N 464 PHE HD1 H N N 465 PHE HD2 H N N 466 PHE HE1 H N N 467 PHE HE2 H N N 468 PHE HZ H N N 469 PHE HXT H N N 470 PRO N N N N 471 PRO CA C N S 472 PRO C C N N 473 PRO O O N N 474 PRO CB C N N 475 PRO CG C N N 476 PRO CD C N N 477 PRO OXT O N N 478 PRO H H N N 479 PRO HA H N N 480 PRO HB2 H N N 481 PRO HB3 H N N 482 PRO HG2 H N N 483 PRO HG3 H N N 484 PRO HD2 H N N 485 PRO HD3 H N N 486 PRO HXT H N N 487 SER N N N N 488 SER CA C N S 489 SER C C N N 490 SER O O N N 491 SER CB C N N 492 SER OG O N N 493 SER OXT O N N 494 SER H H N N 495 SER H2 H N N 496 SER HA H N N 497 SER HB2 H N N 498 SER HB3 H N N 499 SER HG H N N 500 SER HXT H N N 501 THR N N N N 502 THR CA C N S 503 THR C C N N 504 THR O O N N 505 THR CB C N R 506 THR OG1 O N N 507 THR CG2 C N N 508 THR OXT O N N 509 THR H H N N 510 THR H2 H N N 511 THR HA H N N 512 THR HB H N N 513 THR HG1 H N N 514 THR HG21 H N N 515 THR HG22 H N N 516 THR HG23 H N N 517 THR HXT H N N 518 TRP N N N N 519 TRP CA C N S 520 TRP C C N N 521 TRP O O N N 522 TRP CB C N N 523 TRP CG C Y N 524 TRP CD1 C Y N 525 TRP CD2 C Y N 526 TRP NE1 N Y N 527 TRP CE2 C Y N 528 TRP CE3 C Y N 529 TRP CZ2 C Y N 530 TRP CZ3 C Y N 531 TRP CH2 C Y N 532 TRP OXT O N N 533 TRP H H N N 534 TRP H2 H N N 535 TRP HA H N N 536 TRP HB2 H N N 537 TRP HB3 H N N 538 TRP HD1 H N N 539 TRP HE1 H N N 540 TRP HE3 H N N 541 TRP HZ2 H N N 542 TRP HZ3 H N N 543 TRP HH2 H N N 544 TRP HXT H N N 545 TYR N N N N 546 TYR CA C N S 547 TYR C C N N 548 TYR O O N N 549 TYR CB C N N 550 TYR CG C Y N 551 TYR CD1 C Y N 552 TYR CD2 C Y N 553 TYR CE1 C Y N 554 TYR CE2 C Y N 555 TYR CZ C Y N 556 TYR OH O N N 557 TYR OXT O N N 558 TYR H H N N 559 TYR H2 H N N 560 TYR HA H N N 561 TYR HB2 H N N 562 TYR HB3 H N N 563 TYR HD1 H N N 564 TYR HD2 H N N 565 TYR HE1 H N N 566 TYR HE2 H N N 567 TYR HH H N N 568 TYR HXT H N N 569 U OP3 O N N 570 U P P N N 571 U OP1 O N N 572 U OP2 O N N 573 U "O5'" O N N 574 U "C5'" C N N 575 U "C4'" C N R 576 U "O4'" O N N 577 U "C3'" C N S 578 U "O3'" O N N 579 U "C2'" C N R 580 U "O2'" O N N 581 U "C1'" C N R 582 U N1 N N N 583 U C2 C N N 584 U O2 O N N 585 U N3 N N N 586 U C4 C N N 587 U O4 O N N 588 U C5 C N N 589 U C6 C N N 590 U HOP3 H N N 591 U HOP2 H N N 592 U "H5'" H N N 593 U "H5''" H N N 594 U "H4'" H N N 595 U "H3'" H N N 596 U "HO3'" H N N 597 U "H2'" H N N 598 U "HO2'" H N N 599 U "H1'" H N N 600 U H3 H N N 601 U H5 H N N 602 U H6 H N N 603 VAL N N N N 604 VAL CA C N S 605 VAL C C N N 606 VAL O O N N 607 VAL CB C N N 608 VAL CG1 C N N 609 VAL CG2 C N N 610 VAL OXT O N N 611 VAL H H N N 612 VAL H2 H N N 613 VAL HA H N N 614 VAL HB H N N 615 VAL HG11 H N N 616 VAL HG12 H N N 617 VAL HG13 H N N 618 VAL HG21 H N N 619 VAL HG22 H N N 620 VAL HG23 H N N 621 VAL HXT H N N 622 Y01 CAA C N N 623 Y01 CBA C N N 624 Y01 CAB C N N 625 Y01 CAN C N N 626 Y01 CAJ C N N 627 Y01 CAO C N N 628 Y01 CBB C N R 629 Y01 CAC C N N 630 Y01 CBE C N R 631 Y01 CAP C N N 632 Y01 CAQ C N N 633 Y01 CBG C N S 634 Y01 CBI C N R 635 Y01 CAE C N N 636 Y01 CAU C N N 637 Y01 CAS C N N 638 Y01 CBF C N S 639 Y01 CBD C N S 640 Y01 CAK C N N 641 Y01 CAI C N N 642 Y01 CAZ C N N 643 Y01 CAV C N N 644 Y01 CBH C N R 645 Y01 CAD C N N 646 Y01 CAT C N N 647 Y01 CAR C N N 648 Y01 CBC C N S 649 Y01 OAW O N N 650 Y01 CAY C N N 651 Y01 OAG O N N 652 Y01 CAM C N N 653 Y01 CAL C N N 654 Y01 CAX C N N 655 Y01 OAH O N N 656 Y01 OAF O N N 657 Y01 HAA1 H N N 658 Y01 HAA2 H N N 659 Y01 HAA3 H N N 660 Y01 HBA H N N 661 Y01 HAB1 H N N 662 Y01 HAB2 H N N 663 Y01 HAB3 H N N 664 Y01 HAN1 H N N 665 Y01 HAN2 H N N 666 Y01 HAJ1 H N N 667 Y01 HAJ2 H N N 668 Y01 HAO1 H N N 669 Y01 HAO2 H N N 670 Y01 HBB H N N 671 Y01 HAC1 H N N 672 Y01 HAC2 H N N 673 Y01 HAC3 H N N 674 Y01 HBE H N N 675 Y01 HAP1 H N N 676 Y01 HAP2 H N N 677 Y01 HAQ1 H N N 678 Y01 HAQ2 H N N 679 Y01 HBG H N N 680 Y01 HBD H N N 681 Y01 HAE1 H N N 682 Y01 HAE2 H N N 683 Y01 HAE3 H N N 684 Y01 HAU1 H N N 685 Y01 HAU2 H N N 686 Y01 HAS1 H N N 687 Y01 HAS2 H N N 688 Y01 HBF H N N 689 Y01 HAK1 H N N 690 Y01 HAK2 H N N 691 Y01 HAI H N N 692 Y01 HAV1 H N N 693 Y01 HAV2 H N N 694 Y01 HBC H N N 695 Y01 HAD1 H N N 696 Y01 HAD2 H N N 697 Y01 HAD3 H N N 698 Y01 HAT1 H N N 699 Y01 HAT2 H N N 700 Y01 HAR1 H N N 701 Y01 HAR2 H N N 702 Y01 HAM1 H N N 703 Y01 HAM2 H N N 704 Y01 HAL1 H N N 705 Y01 HAL2 H N N 706 Y01 HAH H N N 707 ZN ZN ZN N N 708 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LBN C12 N1 sing N N 210 LBN O3 P1 sing N N 211 LBN O2 C9 sing N N 212 LBN O2 P1 sing N N 213 LBN C9 C6 sing N N 214 LBN O4 P1 doub N N 215 LBN P1 O1 sing N N 216 LBN C6 N1 sing N N 217 LBN N1 C15 sing N N 218 LBN N1 C18 sing N N 219 LBN O1 C1 sing N N 220 LBN C2 C1 sing N N 221 LBN C2 C3 sing N N 222 LBN C2 O7 sing N N 223 LBN C3 O5 sing N N 224 LBN O6 C25 doub N N 225 LBN O5 C25 sing N N 226 LBN O7 C34 sing N N 227 LBN C25 C26 sing N N 228 LBN C34 C35 sing N N 229 LBN C34 O8 doub N N 230 LBN C26 C27 sing N N 231 LBN C35 C36 sing N N 232 LBN C27 C28 sing N N 233 LBN C36 C37 sing N N 234 LBN C28 C29 sing N N 235 LBN C37 C38 sing N N 236 LBN C29 C30 sing N N 237 LBN C39 C38 sing N N 238 LBN C39 C40 sing N N 239 LBN C41 C40 sing N N 240 LBN C41 C42 sing N N 241 LBN C30 C31 sing N N 242 LBN C42 C5 doub N Z 243 LBN C31 C32 sing N N 244 LBN C5 C8 sing N N 245 LBN C8 C11 sing N N 246 LBN C32 C33 sing N N 247 LBN C11 C14 sing N N 248 LBN C33 C4 sing N N 249 LBN C14 C17 sing N N 250 LBN C4 C7 sing N N 251 LBN C17 C20 sing N N 252 LBN C7 C10 sing N N 253 LBN C20 C22 sing N N 254 LBN C10 C13 sing N N 255 LBN C22 C23 sing N N 256 LBN C13 C16 sing N N 257 LBN C23 C24 sing N N 258 LBN C16 C19 sing N N 259 LBN C19 C21 sing N N 260 LBN C1 H1 sing N N 261 LBN C1 H2 sing N N 262 LBN C2 H3 sing N N 263 LBN C3 H4 sing N N 264 LBN C3 H5 sing N N 265 LBN C4 H6 sing N N 266 LBN C4 H7 sing N N 267 LBN C5 H8 sing N N 268 LBN C6 H9 sing N N 269 LBN C6 H10 sing N N 270 LBN C7 H11 sing N N 271 LBN C7 H12 sing N N 272 LBN C8 H13 sing N N 273 LBN C8 H14 sing N N 274 LBN C9 H15 sing N N 275 LBN C9 H16 sing N N 276 LBN C10 H17 sing N N 277 LBN C10 H18 sing N N 278 LBN C11 H19 sing N N 279 LBN C12 H20 sing N N 280 LBN C12 H21 sing N N 281 LBN C12 H22 sing N N 282 LBN C13 H23 sing N N 283 LBN C13 H24 sing N N 284 LBN C14 H25 sing N N 285 LBN C15 H26 sing N N 286 LBN C15 H27 sing N N 287 LBN C15 H28 sing N N 288 LBN C16 H30 sing N N 289 LBN C16 H31 sing N N 290 LBN C17 H32 sing N N 291 LBN C17 H33 sing N N 292 LBN C18 H34 sing N N 293 LBN C18 H35 sing N N 294 LBN C18 H36 sing N N 295 LBN C19 H37 sing N N 296 LBN C19 H38 sing N N 297 LBN C20 H39 sing N N 298 LBN C20 H40 sing N N 299 LBN C21 H41 sing N N 300 LBN C21 H42 sing N N 301 LBN C21 H43 sing N N 302 LBN C22 H44 sing N N 303 LBN C22 H45 sing N N 304 LBN C23 H46 sing N N 305 LBN C23 H47 sing N N 306 LBN C24 H48 sing N N 307 LBN C24 H49 sing N N 308 LBN C24 H50 sing N N 309 LBN C26 H51 sing N N 310 LBN C26 H52 sing N N 311 LBN C27 H53 sing N N 312 LBN C27 H54 sing N N 313 LBN C28 H55 sing N N 314 LBN C28 H56 sing N N 315 LBN C29 H57 sing N N 316 LBN C29 H58 sing N N 317 LBN C30 H59 sing N N 318 LBN C30 H60 sing N N 319 LBN C31 H61 sing N N 320 LBN C31 H62 sing N N 321 LBN C32 H63 sing N N 322 LBN C32 H64 sing N N 323 LBN C33 H65 sing N N 324 LBN C33 H66 sing N N 325 LBN C35 H67 sing N N 326 LBN C35 H68 sing N N 327 LBN C36 H69 sing N N 328 LBN C36 H70 sing N N 329 LBN C37 H71 sing N N 330 LBN C37 H72 sing N N 331 LBN C38 H73 sing N N 332 LBN C38 H74 sing N N 333 LBN C39 H75 sing N N 334 LBN C40 H76 sing N N 335 LBN C41 H77 sing N N 336 LBN C41 H78 sing N N 337 LBN C42 H79 sing N N 338 LBN C11 H80 sing N N 339 LBN C14 H81 sing N N 340 LBN C39 H82 sing N N 341 LBN C40 H83 sing N N 342 LEU N CA sing N N 343 LEU N H sing N N 344 LEU N H2 sing N N 345 LEU CA C sing N N 346 LEU CA CB sing N N 347 LEU CA HA sing N N 348 LEU C O doub N N 349 LEU C OXT sing N N 350 LEU CB CG sing N N 351 LEU CB HB2 sing N N 352 LEU CB HB3 sing N N 353 LEU CG CD1 sing N N 354 LEU CG CD2 sing N N 355 LEU CG HG sing N N 356 LEU CD1 HD11 sing N N 357 LEU CD1 HD12 sing N N 358 LEU CD1 HD13 sing N N 359 LEU CD2 HD21 sing N N 360 LEU CD2 HD22 sing N N 361 LEU CD2 HD23 sing N N 362 LEU OXT HXT sing N N 363 LYS N CA sing N N 364 LYS N H sing N N 365 LYS N H2 sing N N 366 LYS CA C sing N N 367 LYS CA CB sing N N 368 LYS CA HA sing N N 369 LYS C O doub N N 370 LYS C OXT sing N N 371 LYS CB CG sing N N 372 LYS CB HB2 sing N N 373 LYS CB HB3 sing N N 374 LYS CG CD sing N N 375 LYS CG HG2 sing N N 376 LYS CG HG3 sing N N 377 LYS CD CE sing N N 378 LYS CD HD2 sing N N 379 LYS CD HD3 sing N N 380 LYS CE NZ sing N N 381 LYS CE HE2 sing N N 382 LYS CE HE3 sing N N 383 LYS NZ HZ1 sing N N 384 LYS NZ HZ2 sing N N 385 LYS NZ HZ3 sing N N 386 LYS OXT HXT sing N N 387 MET N CA sing N N 388 MET N H sing N N 389 MET N H2 sing N N 390 MET CA C sing N N 391 MET CA CB sing N N 392 MET CA HA sing N N 393 MET C O doub N N 394 MET C OXT sing N N 395 MET CB CG sing N N 396 MET CB HB2 sing N N 397 MET CB HB3 sing N N 398 MET CG SD sing N N 399 MET CG HG2 sing N N 400 MET CG HG3 sing N N 401 MET SD CE sing N N 402 MET CE HE1 sing N N 403 MET CE HE2 sing N N 404 MET CE HE3 sing N N 405 MET OXT HXT sing N N 406 NAG C1 C2 sing N N 407 NAG C1 O1 sing N N 408 NAG C1 O5 sing N N 409 NAG C1 H1 sing N N 410 NAG C2 C3 sing N N 411 NAG C2 N2 sing N N 412 NAG C2 H2 sing N N 413 NAG C3 C4 sing N N 414 NAG C3 O3 sing N N 415 NAG C3 H3 sing N N 416 NAG C4 C5 sing N N 417 NAG C4 O4 sing N N 418 NAG C4 H4 sing N N 419 NAG C5 C6 sing N N 420 NAG C5 O5 sing N N 421 NAG C5 H5 sing N N 422 NAG C6 O6 sing N N 423 NAG C6 H61 sing N N 424 NAG C6 H62 sing N N 425 NAG C7 C8 sing N N 426 NAG C7 N2 sing N N 427 NAG C7 O7 doub N N 428 NAG C8 H81 sing N N 429 NAG C8 H82 sing N N 430 NAG C8 H83 sing N N 431 NAG N2 HN2 sing N N 432 NAG O1 HO1 sing N N 433 NAG O3 HO3 sing N N 434 NAG O4 HO4 sing N N 435 NAG O6 HO6 sing N N 436 PHE N CA sing N N 437 PHE N H sing N N 438 PHE N H2 sing N N 439 PHE CA C sing N N 440 PHE CA CB sing N N 441 PHE CA HA sing N N 442 PHE C O doub N N 443 PHE C OXT sing N N 444 PHE CB CG sing N N 445 PHE CB HB2 sing N N 446 PHE CB HB3 sing N N 447 PHE CG CD1 doub Y N 448 PHE CG CD2 sing Y N 449 PHE CD1 CE1 sing Y N 450 PHE CD1 HD1 sing N N 451 PHE CD2 CE2 doub Y N 452 PHE CD2 HD2 sing N N 453 PHE CE1 CZ doub Y N 454 PHE CE1 HE1 sing N N 455 PHE CE2 CZ sing Y N 456 PHE CE2 HE2 sing N N 457 PHE CZ HZ sing N N 458 PHE OXT HXT sing N N 459 PRO N CA sing N N 460 PRO N CD sing N N 461 PRO N H sing N N 462 PRO CA C sing N N 463 PRO CA CB sing N N 464 PRO CA HA sing N N 465 PRO C O doub N N 466 PRO C OXT sing N N 467 PRO CB CG sing N N 468 PRO CB HB2 sing N N 469 PRO CB HB3 sing N N 470 PRO CG CD sing N N 471 PRO CG HG2 sing N N 472 PRO CG HG3 sing N N 473 PRO CD HD2 sing N N 474 PRO CD HD3 sing N N 475 PRO OXT HXT sing N N 476 SER N CA sing N N 477 SER N H sing N N 478 SER N H2 sing N N 479 SER CA C sing N N 480 SER CA CB sing N N 481 SER CA HA sing N N 482 SER C O doub N N 483 SER C OXT sing N N 484 SER CB OG sing N N 485 SER CB HB2 sing N N 486 SER CB HB3 sing N N 487 SER OG HG sing N N 488 SER OXT HXT sing N N 489 THR N CA sing N N 490 THR N H sing N N 491 THR N H2 sing N N 492 THR CA C sing N N 493 THR CA CB sing N N 494 THR CA HA sing N N 495 THR C O doub N N 496 THR C OXT sing N N 497 THR CB OG1 sing N N 498 THR CB CG2 sing N N 499 THR CB HB sing N N 500 THR OG1 HG1 sing N N 501 THR CG2 HG21 sing N N 502 THR CG2 HG22 sing N N 503 THR CG2 HG23 sing N N 504 THR OXT HXT sing N N 505 TRP N CA sing N N 506 TRP N H sing N N 507 TRP N H2 sing N N 508 TRP CA C sing N N 509 TRP CA CB sing N N 510 TRP CA HA sing N N 511 TRP C O doub N N 512 TRP C OXT sing N N 513 TRP CB CG sing N N 514 TRP CB HB2 sing N N 515 TRP CB HB3 sing N N 516 TRP CG CD1 doub Y N 517 TRP CG CD2 sing Y N 518 TRP CD1 NE1 sing Y N 519 TRP CD1 HD1 sing N N 520 TRP CD2 CE2 doub Y N 521 TRP CD2 CE3 sing Y N 522 TRP NE1 CE2 sing Y N 523 TRP NE1 HE1 sing N N 524 TRP CE2 CZ2 sing Y N 525 TRP CE3 CZ3 doub Y N 526 TRP CE3 HE3 sing N N 527 TRP CZ2 CH2 doub Y N 528 TRP CZ2 HZ2 sing N N 529 TRP CZ3 CH2 sing Y N 530 TRP CZ3 HZ3 sing N N 531 TRP CH2 HH2 sing N N 532 TRP OXT HXT sing N N 533 TYR N CA sing N N 534 TYR N H sing N N 535 TYR N H2 sing N N 536 TYR CA C sing N N 537 TYR CA CB sing N N 538 TYR CA HA sing N N 539 TYR C O doub N N 540 TYR C OXT sing N N 541 TYR CB CG sing N N 542 TYR CB HB2 sing N N 543 TYR CB HB3 sing N N 544 TYR CG CD1 doub Y N 545 TYR CG CD2 sing Y N 546 TYR CD1 CE1 sing Y N 547 TYR CD1 HD1 sing N N 548 TYR CD2 CE2 doub Y N 549 TYR CD2 HD2 sing N N 550 TYR CE1 CZ doub Y N 551 TYR CE1 HE1 sing N N 552 TYR CE2 CZ sing Y N 553 TYR CE2 HE2 sing N N 554 TYR CZ OH sing N N 555 TYR OH HH sing N N 556 TYR OXT HXT sing N N 557 U OP3 P sing N N 558 U OP3 HOP3 sing N N 559 U P OP1 doub N N 560 U P OP2 sing N N 561 U P "O5'" sing N N 562 U OP2 HOP2 sing N N 563 U "O5'" "C5'" sing N N 564 U "C5'" "C4'" sing N N 565 U "C5'" "H5'" sing N N 566 U "C5'" "H5''" sing N N 567 U "C4'" "O4'" sing N N 568 U "C4'" "C3'" sing N N 569 U "C4'" "H4'" sing N N 570 U "O4'" "C1'" sing N N 571 U "C3'" "O3'" sing N N 572 U "C3'" "C2'" sing N N 573 U "C3'" "H3'" sing N N 574 U "O3'" "HO3'" sing N N 575 U "C2'" "O2'" sing N N 576 U "C2'" "C1'" sing N N 577 U "C2'" "H2'" sing N N 578 U "O2'" "HO2'" sing N N 579 U "C1'" N1 sing N N 580 U "C1'" "H1'" sing N N 581 U N1 C2 sing N N 582 U N1 C6 sing N N 583 U C2 O2 doub N N 584 U C2 N3 sing N N 585 U N3 C4 sing N N 586 U N3 H3 sing N N 587 U C4 O4 doub N N 588 U C4 C5 sing N N 589 U C5 C6 doub N N 590 U C5 H5 sing N N 591 U C6 H6 sing N N 592 VAL N CA sing N N 593 VAL N H sing N N 594 VAL N H2 sing N N 595 VAL CA C sing N N 596 VAL CA CB sing N N 597 VAL CA HA sing N N 598 VAL C O doub N N 599 VAL C OXT sing N N 600 VAL CB CG1 sing N N 601 VAL CB CG2 sing N N 602 VAL CB HB sing N N 603 VAL CG1 HG11 sing N N 604 VAL CG1 HG12 sing N N 605 VAL CG1 HG13 sing N N 606 VAL CG2 HG21 sing N N 607 VAL CG2 HG22 sing N N 608 VAL CG2 HG23 sing N N 609 VAL OXT HXT sing N N 610 Y01 CAA CBA sing N N 611 Y01 CBA CAB sing N N 612 Y01 CBA CAN sing N N 613 Y01 CAN CAJ sing N N 614 Y01 CAJ CAO sing N N 615 Y01 CAO CBB sing N N 616 Y01 CBB CAC sing N N 617 Y01 CBB CBE sing N N 618 Y01 CBE CAP sing N N 619 Y01 CBE CBI sing N N 620 Y01 CAP CAQ sing N N 621 Y01 CAQ CBG sing N N 622 Y01 CBG CBI sing N N 623 Y01 CBG CBD sing N N 624 Y01 CBI CAE sing N N 625 Y01 CBI CAU sing N N 626 Y01 CAU CAS sing N N 627 Y01 CAS CBF sing N N 628 Y01 CBF CBD sing N N 629 Y01 CBF CBH sing N N 630 Y01 CBD CAK sing N N 631 Y01 CAK CAI sing N N 632 Y01 CAI CAZ doub N N 633 Y01 CAZ CAV sing N N 634 Y01 CAZ CBH sing N N 635 Y01 CAV CBC sing N N 636 Y01 CBH CAD sing N N 637 Y01 CBH CAT sing N N 638 Y01 CAT CAR sing N N 639 Y01 CAR CBC sing N N 640 Y01 CBC OAW sing N N 641 Y01 OAW CAY sing N N 642 Y01 CAY OAG doub N N 643 Y01 CAY CAM sing N N 644 Y01 CAM CAL sing N N 645 Y01 CAL CAX sing N N 646 Y01 CAX OAH sing N N 647 Y01 CAX OAF doub N N 648 Y01 CAA HAA1 sing N N 649 Y01 CAA HAA2 sing N N 650 Y01 CAA HAA3 sing N N 651 Y01 CBA HBA sing N N 652 Y01 CAB HAB1 sing N N 653 Y01 CAB HAB2 sing N N 654 Y01 CAB HAB3 sing N N 655 Y01 CAN HAN1 sing N N 656 Y01 CAN HAN2 sing N N 657 Y01 CAJ HAJ1 sing N N 658 Y01 CAJ HAJ2 sing N N 659 Y01 CAO HAO1 sing N N 660 Y01 CAO HAO2 sing N N 661 Y01 CBB HBB sing N N 662 Y01 CAC HAC1 sing N N 663 Y01 CAC HAC2 sing N N 664 Y01 CAC HAC3 sing N N 665 Y01 CBE HBE sing N N 666 Y01 CAP HAP1 sing N N 667 Y01 CAP HAP2 sing N N 668 Y01 CAQ HAQ1 sing N N 669 Y01 CAQ HAQ2 sing N N 670 Y01 CBG HBG sing N N 671 Y01 CBD HBD sing N N 672 Y01 CAE HAE1 sing N N 673 Y01 CAE HAE2 sing N N 674 Y01 CAE HAE3 sing N N 675 Y01 CAU HAU1 sing N N 676 Y01 CAU HAU2 sing N N 677 Y01 CAS HAS1 sing N N 678 Y01 CAS HAS2 sing N N 679 Y01 CBF HBF sing N N 680 Y01 CAK HAK1 sing N N 681 Y01 CAK HAK2 sing N N 682 Y01 CAI HAI sing N N 683 Y01 CAV HAV1 sing N N 684 Y01 CAV HAV2 sing N N 685 Y01 CBC HBC sing N N 686 Y01 CAD HAD1 sing N N 687 Y01 CAD HAD2 sing N N 688 Y01 CAD HAD3 sing N N 689 Y01 CAT HAT1 sing N N 690 Y01 CAT HAT2 sing N N 691 Y01 CAR HAR1 sing N N 692 Y01 CAR HAR2 sing N N 693 Y01 CAM HAM1 sing N N 694 Y01 CAM HAM2 sing N N 695 Y01 CAL HAL1 sing N N 696 Y01 CAL HAL2 sing N N 697 Y01 OAH HAH sing N N 698 # _em_admin.current_status REL _em_admin.deposition_date 2024-12-27 _em_admin.deposition_site PDBJ _em_admin.entry_id 9L8M _em_admin.last_update 2026-01-21 _em_admin.map_release_date 2026-01-21 _em_admin.title 'Structure of SID-1 in complex with dsRNA' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.086 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.ncbi_tax_id 6239 _em_entity_assembly_naturalsource.organism 'Caenorhabditis elegans' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_entity_assembly_synthetic.cell ? _em_entity_assembly_synthetic.cellular_location ? _em_entity_assembly_synthetic.entity_assembly_id 1 _em_entity_assembly_synthetic.id 1 _em_entity_assembly_synthetic.ncbi_tax_id 32630 _em_entity_assembly_synthetic.organ ? _em_entity_assembly_synthetic.organelle ? _em_entity_assembly_synthetic.organism 'synthetic construct' _em_entity_assembly_synthetic.strain ? _em_entity_assembly_synthetic.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 5.0 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 62.844 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images 2793 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 15 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? RELION 3.1 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? RELION 3.1 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot 0.8.9 OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? Servalcat 0.4.88 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? RELION 3.1 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? RELION 3.1 CLASSIFICATION ? 12 1 ? ? RELION 3.1 RECONSTRUCTION ? 13 1 ? ? RELION 3.1 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _ndb_struct_conf_na.entry_id 9L8M _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B A 1 1_555 C U 11 1_555 0.621 -0.408 0.926 -9.694 -5.935 -7.200 1 C_A1:U11_D C 1 ? D 11 ? 20 1 1 B A 2 1_555 C U 10 1_555 0.573 -0.361 -0.883 -13.548 8.188 -0.671 2 C_A2:U10_D C 2 ? D 10 ? 20 1 1 B A 3 1_555 C U 9 1_555 -0.149 -0.121 -0.338 -8.868 -4.316 3.202 3 C_A3:U9_D C 3 ? D 9 ? 20 1 1 B A 4 1_555 C U 8 1_555 -0.133 0.201 -0.321 -10.915 -6.122 4.592 4 C_A4:U8_D C 4 ? D 8 ? 20 1 1 B A 5 1_555 C U 7 1_555 0.297 0.215 -0.041 -15.025 -6.630 -1.339 5 C_A5:U7_D C 5 ? D 7 ? 20 1 1 B A 6 1_555 C U 6 1_555 1.060 -0.016 0.195 -5.521 -8.316 3.320 6 C_A6:U6_D C 6 ? D 6 ? 20 1 1 B A 7 1_555 C U 5 1_555 -0.066 -0.134 0.125 -2.499 -5.177 2.155 7 C_A7:U5_D C 7 ? D 5 ? 20 1 1 B A 8 1_555 C U 4 1_555 0.577 -0.259 0.087 1.362 -10.131 4.459 8 C_A8:U4_D C 8 ? D 4 ? 20 1 1 B A 9 1_555 C U 3 1_555 0.106 -0.398 0.021 -0.543 -14.184 4.963 9 C_A9:U3_D C 9 ? D 3 ? 20 1 1 B A 10 1_555 C U 2 1_555 0.049 -0.113 0.289 -4.067 -10.459 5.908 10 C_A10:U2_D C 10 ? D 2 ? 20 1 1 B A 11 1_555 C U 1 1_555 -0.025 0.152 0.400 -3.224 -5.836 1.365 11 C_A11:U1_D C 11 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B A 1 1_555 C U 11 1_555 B A 2 1_555 C U 10 1_555 0.320 -0.917 4.105 4.136 -4.164 34.350 -0.722 0.270 4.193 -6.987 -6.940 34.833 1 CC_A1A2:U10U11_DD C 1 ? D 11 ? C 2 ? D 10 ? 1 B A 2 1_555 C U 10 1_555 B A 3 1_555 C U 9 1_555 0.073 -1.983 3.051 -2.557 8.424 24.988 -6.195 -0.725 2.255 18.741 5.689 26.471 2 CC_A2A3:U9U10_DD C 2 ? D 10 ? C 3 ? D 9 ? 1 B A 3 1_555 C U 9 1_555 B A 4 1_555 C U 8 1_555 -0.296 -1.525 3.231 -0.403 6.870 32.469 -3.757 0.455 2.861 12.117 0.711 33.171 3 CC_A3A4:U8U9_DD C 3 ? D 9 ? C 4 ? D 8 ? 1 B A 4 1_555 C U 8 1_555 B A 5 1_555 C U 7 1_555 -0.248 -1.593 3.461 -0.959 2.809 34.282 -3.148 0.264 3.330 4.754 1.623 34.406 4 CC_A4A5:U7U8_DD C 4 ? D 8 ? C 5 ? D 7 ? 1 B A 5 1_555 C U 7 1_555 B A 6 1_555 C U 6 1_555 -0.142 -0.727 3.079 -0.622 3.692 34.638 -1.736 0.150 2.990 6.178 1.041 34.834 5 CC_A5A6:U6U7_DD C 5 ? D 7 ? C 6 ? D 6 ? 1 B A 6 1_555 C U 6 1_555 B A 7 1_555 C U 5 1_555 0.182 -1.975 3.203 1.312 6.099 22.350 -6.815 -0.043 2.586 15.355 -3.302 23.194 6 CC_A6A7:U5U6_DD C 6 ? D 6 ? C 7 ? D 5 ? 1 B A 7 1_555 C U 5 1_555 B A 8 1_555 C U 4 1_555 -0.465 -0.974 3.246 -1.117 1.673 34.035 -1.924 0.617 3.209 2.856 1.907 34.093 7 CC_A7A8:U4U5_DD C 7 ? D 5 ? C 8 ? D 4 ? 1 B A 8 1_555 C U 4 1_555 B A 9 1_555 C U 3 1_555 -0.316 -1.409 3.167 -0.675 5.932 29.856 -3.786 0.477 2.846 11.371 1.295 30.434 8 CC_A8A9:U3U4_DD C 8 ? D 4 ? C 9 ? D 3 ? 1 B A 9 1_555 C U 3 1_555 B A 10 1_555 C U 2 1_555 -0.155 -1.059 3.351 -1.855 1.054 33.203 -2.029 -0.046 3.320 1.842 3.243 33.270 9 CC_A9A10:U2U3_DD C 9 ? D 3 ? C 10 ? D 2 ? 1 B A 10 1_555 C U 2 1_555 B A 11 1_555 C U 1 1_555 -0.173 -0.916 3.307 -0.143 -0.668 33.546 -1.476 0.275 3.325 -1.157 0.247 33.553 10 CC_A10A11:U1U2_DD C 10 ? D 2 ? C 11 ? D 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan JP21H05037 1 'Japan Science and Technology' Japan JPMJCR20E2 2 'Japan Agency for Medical Research and Development (AMED)' Japan JP19am01011115 3 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n # _atom_sites.entry_id 9L8M _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S ZN # loop_ #