data_9LDG # _entry.id 9LDG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9LDG pdb_00009ldg 10.2210/pdb9ldg/pdb WWPDB D_1300055409 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-11-12 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9LDG _pdbx_database_status.recvd_initial_deposition_date 2025-01-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 4 _pdbx_contact_author.email ganjhh@fudan.edu.cn _pdbx_contact_author.name_first Jianhua _pdbx_contact_author.name_last Gan _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-8438-8852 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, C.L.' 1 ? 'Yang, J.' 2 ? 'Zhang, W.Z.' 3 ? 'Gan, J.H.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The structure of TkoKptA/DNA/Appr>P complex-B' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, C.L.' 1 ? primary 'Yang, J.' 2 ? primary 'Zhang, W.Z.' 3 ? primary 'Gan, J.H.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Probable RNA 2'-phosphotransferase ; 20978.260 2 2.7.1.- ? ? ? 2 polymer syn ;DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') ; 3087.110 2 ? ? ? ? 3 non-polymer syn ;[[(3~{a}~{R},5~{R},6~{R},6~{a}~{R})-2,6-bis(oxidanyl)-2-oxidanylidene-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3,2]dioxaphosphol-5-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate ; 621.280 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 39 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKPERKRVSKLMAYILRHSPEEFGLRPDVEGFVSLNELVNALKTVYPEVTEEFVREIVENDPKGRYEIRGDRIRARYGHS FPVSLDHEEDTESRFLYHGTPRRNLPSILKEGLKPMKRQYVHVSTDKIEALETGRRHGREVVLLVIDAECLRKRGFKIYK AGKNVRIVERVPPDCITLAV ; ;MKPERKRVSKLMAYILRHSPEEFGLRPDVEGFVSLNELVNALKTVYPEVTEEFVREIVENDPKGRYEIRGDRIRARYGHS FPVSLDHEEDTESRFLYHGTPRRNLPSILKEGLKPMKRQYVHVSTDKIEALETGRRHGREVVLLVIDAECLRKRGFKIYK AGKNVRIVERVPPDCITLAV ; A,B ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)' AAAAAAAAAA C,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;[[(3~{a}~{R},5~{R},6~{R},6~{a}~{R})-2,6-bis(oxidanyl)-2-oxidanylidene-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3,2]dioxaphosphol-5-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate ; A1EJE 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 PRO n 1 4 GLU n 1 5 ARG n 1 6 LYS n 1 7 ARG n 1 8 VAL n 1 9 SER n 1 10 LYS n 1 11 LEU n 1 12 MET n 1 13 ALA n 1 14 TYR n 1 15 ILE n 1 16 LEU n 1 17 ARG n 1 18 HIS n 1 19 SER n 1 20 PRO n 1 21 GLU n 1 22 GLU n 1 23 PHE n 1 24 GLY n 1 25 LEU n 1 26 ARG n 1 27 PRO n 1 28 ASP n 1 29 VAL n 1 30 GLU n 1 31 GLY n 1 32 PHE n 1 33 VAL n 1 34 SER n 1 35 LEU n 1 36 ASN n 1 37 GLU n 1 38 LEU n 1 39 VAL n 1 40 ASN n 1 41 ALA n 1 42 LEU n 1 43 LYS n 1 44 THR n 1 45 VAL n 1 46 TYR n 1 47 PRO n 1 48 GLU n 1 49 VAL n 1 50 THR n 1 51 GLU n 1 52 GLU n 1 53 PHE n 1 54 VAL n 1 55 ARG n 1 56 GLU n 1 57 ILE n 1 58 VAL n 1 59 GLU n 1 60 ASN n 1 61 ASP n 1 62 PRO n 1 63 LYS n 1 64 GLY n 1 65 ARG n 1 66 TYR n 1 67 GLU n 1 68 ILE n 1 69 ARG n 1 70 GLY n 1 71 ASP n 1 72 ARG n 1 73 ILE n 1 74 ARG n 1 75 ALA n 1 76 ARG n 1 77 TYR n 1 78 GLY n 1 79 HIS n 1 80 SER n 1 81 PHE n 1 82 PRO n 1 83 VAL n 1 84 SER n 1 85 LEU n 1 86 ASP n 1 87 HIS n 1 88 GLU n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 GLU n 1 93 SER n 1 94 ARG n 1 95 PHE n 1 96 LEU n 1 97 TYR n 1 98 HIS n 1 99 GLY n 1 100 THR n 1 101 PRO n 1 102 ARG n 1 103 ARG n 1 104 ASN n 1 105 LEU n 1 106 PRO n 1 107 SER n 1 108 ILE n 1 109 LEU n 1 110 LYS n 1 111 GLU n 1 112 GLY n 1 113 LEU n 1 114 LYS n 1 115 PRO n 1 116 MET n 1 117 LYS n 1 118 ARG n 1 119 GLN n 1 120 TYR n 1 121 VAL n 1 122 HIS n 1 123 VAL n 1 124 SER n 1 125 THR n 1 126 ASP n 1 127 LYS n 1 128 ILE n 1 129 GLU n 1 130 ALA n 1 131 LEU n 1 132 GLU n 1 133 THR n 1 134 GLY n 1 135 ARG n 1 136 ARG n 1 137 HIS n 1 138 GLY n 1 139 ARG n 1 140 GLU n 1 141 VAL n 1 142 VAL n 1 143 LEU n 1 144 LEU n 1 145 VAL n 1 146 ILE n 1 147 ASP n 1 148 ALA n 1 149 GLU n 1 150 CYS n 1 151 LEU n 1 152 ARG n 1 153 LYS n 1 154 ARG n 1 155 GLY n 1 156 PHE n 1 157 LYS n 1 158 ILE n 1 159 TYR n 1 160 LYS n 1 161 ALA n 1 162 GLY n 1 163 LYS n 1 164 ASN n 1 165 VAL n 1 166 ARG n 1 167 ILE n 1 168 VAL n 1 169 GLU n 1 170 ARG n 1 171 VAL n 1 172 PRO n 1 173 PRO n 1 174 ASP n 1 175 CYS n 1 176 ILE n 1 177 THR n 1 178 LEU n 1 179 ALA n 1 180 VAL n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DA n 2 8 DA n 2 9 DA n 2 10 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 180 _entity_src_gen.gene_src_common_name 'Pyrococcus kodakaraensis (strain KOD1)' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'kptA, TK0302' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-918 / JCM 12380 / KOD1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus kodakarensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 69014 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1EJE non-polymer . ;[[(3~{a}~{R},5~{R},6~{R},6~{a}~{R})-2,6-bis(oxidanyl)-2-oxidanylidene-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3,2]dioxaphosphol-5-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate ; ? 'C15 H22 N5 O16 P3' 621.280 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 ? ? ? A . n A 1 3 PRO 3 3 ? ? ? A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 HIS 98 98 98 HIS HIS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 PRO 106 106 106 PRO PRO A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 HIS 122 122 122 HIS HIS A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 CYS 150 150 150 CYS CYS A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 ARG 154 154 154 ARG ARG A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 PRO 172 172 172 PRO PRO A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 CYS 175 175 175 CYS CYS A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 VAL 180 180 180 VAL VAL A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 LYS 2 2 ? ? ? B . n B 1 3 PRO 3 3 ? ? ? B . n B 1 4 GLU 4 4 ? ? ? B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 SER 9 9 9 SER SER B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 MET 12 12 12 MET MET B . n B 1 13 ALA 13 13 13 ALA ALA B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 HIS 18 18 18 HIS HIS B . n B 1 19 SER 19 19 19 SER SER B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 PRO 27 27 27 PRO PRO B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 GLU 30 30 30 GLU GLU B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 PHE 32 32 32 PHE PHE B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 ASN 36 36 36 ASN ASN B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 TYR 46 46 46 TYR TYR B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 GLU 48 48 48 GLU GLU B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 THR 50 50 50 THR THR B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 ILE 57 57 57 ILE ILE B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 GLU 59 59 59 GLU GLU B . n B 1 60 ASN 60 60 60 ASN ASN B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 ARG 65 65 65 ARG ARG B . n B 1 66 TYR 66 66 66 TYR TYR B . n B 1 67 GLU 67 67 67 GLU GLU B . n B 1 68 ILE 68 68 68 ILE ILE B . n B 1 69 ARG 69 69 69 ARG ARG B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 ILE 73 73 73 ILE ILE B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 ARG 76 76 76 ARG ARG B . n B 1 77 TYR 77 77 77 TYR TYR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 HIS 79 79 79 HIS HIS B . n B 1 80 SER 80 80 80 SER SER B . n B 1 81 PHE 81 81 81 PHE PHE B . n B 1 82 PRO 82 82 82 PRO PRO B . n B 1 83 VAL 83 83 83 VAL VAL B . n B 1 84 SER 84 84 84 SER SER B . n B 1 85 LEU 85 85 85 LEU LEU B . n B 1 86 ASP 86 86 86 ASP ASP B . n B 1 87 HIS 87 87 87 HIS HIS B . n B 1 88 GLU 88 88 88 GLU GLU B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 ASP 90 90 90 ASP ASP B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 SER 93 93 93 SER SER B . n B 1 94 ARG 94 94 94 ARG ARG B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 TYR 97 97 97 TYR TYR B . n B 1 98 HIS 98 98 98 HIS HIS B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 THR 100 100 100 THR THR B . n B 1 101 PRO 101 101 101 PRO PRO B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 ARG 103 103 103 ARG ARG B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 LEU 105 105 105 LEU LEU B . n B 1 106 PRO 106 106 106 PRO PRO B . n B 1 107 SER 107 107 107 SER SER B . n B 1 108 ILE 108 108 108 ILE ILE B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 LYS 110 110 110 LYS LYS B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 PRO 115 115 115 PRO PRO B . n B 1 116 MET 116 116 116 MET MET B . n B 1 117 LYS 117 117 117 LYS LYS B . n B 1 118 ARG 118 118 118 ARG ARG B . n B 1 119 GLN 119 119 119 GLN GLN B . n B 1 120 TYR 120 120 120 TYR TYR B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 HIS 122 122 122 HIS HIS B . n B 1 123 VAL 123 123 123 VAL VAL B . n B 1 124 SER 124 124 124 SER SER B . n B 1 125 THR 125 125 125 THR THR B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 LYS 127 127 127 LYS LYS B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 GLU 129 129 129 GLU GLU B . n B 1 130 ALA 130 130 130 ALA ALA B . n B 1 131 LEU 131 131 131 LEU LEU B . n B 1 132 GLU 132 132 132 GLU GLU B . n B 1 133 THR 133 133 133 THR THR B . n B 1 134 GLY 134 134 134 GLY GLY B . n B 1 135 ARG 135 135 135 ARG ARG B . n B 1 136 ARG 136 136 136 ARG ARG B . n B 1 137 HIS 137 137 137 HIS HIS B . n B 1 138 GLY 138 138 138 GLY GLY B . n B 1 139 ARG 139 139 139 ARG ARG B . n B 1 140 GLU 140 140 140 GLU GLU B . n B 1 141 VAL 141 141 141 VAL VAL B . n B 1 142 VAL 142 142 142 VAL VAL B . n B 1 143 LEU 143 143 143 LEU LEU B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 VAL 145 145 145 VAL VAL B . n B 1 146 ILE 146 146 146 ILE ILE B . n B 1 147 ASP 147 147 147 ASP ASP B . n B 1 148 ALA 148 148 148 ALA ALA B . n B 1 149 GLU 149 149 149 GLU GLU B . n B 1 150 CYS 150 150 150 CYS CYS B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 ARG 152 152 152 ARG ARG B . n B 1 153 LYS 153 153 153 LYS LYS B . n B 1 154 ARG 154 154 154 ARG ARG B . n B 1 155 GLY 155 155 155 GLY GLY B . n B 1 156 PHE 156 156 156 PHE PHE B . n B 1 157 LYS 157 157 157 LYS LYS B . n B 1 158 ILE 158 158 158 ILE ILE B . n B 1 159 TYR 159 159 159 TYR TYR B . n B 1 160 LYS 160 160 160 LYS LYS B . n B 1 161 ALA 161 161 161 ALA ALA B . n B 1 162 GLY 162 162 162 GLY GLY B . n B 1 163 LYS 163 163 163 LYS LYS B . n B 1 164 ASN 164 164 164 ASN ASN B . n B 1 165 VAL 165 165 165 VAL VAL B . n B 1 166 ARG 166 166 166 ARG ARG B . n B 1 167 ILE 167 167 167 ILE ILE B . n B 1 168 VAL 168 168 168 VAL VAL B . n B 1 169 GLU 169 169 169 GLU GLU B . n B 1 170 ARG 170 170 170 ARG ARG B . n B 1 171 VAL 171 171 171 VAL VAL B . n B 1 172 PRO 172 172 172 PRO PRO B . n B 1 173 PRO 173 173 173 PRO PRO B . n B 1 174 ASP 174 174 174 ASP ASP B . n B 1 175 CYS 175 175 175 CYS CYS B . n B 1 176 ILE 176 176 176 ILE ILE B . n B 1 177 THR 177 177 177 THR THR B . n B 1 178 LEU 178 178 178 LEU LEU B . n B 1 179 ALA 179 179 179 ALA ALA B . n B 1 180 VAL 180 180 180 VAL VAL B . n C 2 1 DA 1 1 1 DA DA C . n C 2 2 DA 2 2 2 DA DA C . n C 2 3 DA 3 3 3 DA DA C . n C 2 4 DA 4 4 4 DA DA C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DA 6 6 6 DA DA C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DA 8 8 8 DA DA C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DA 10 10 10 DA DA C . n D 2 1 DA 1 1 1 DA DA D . n D 2 2 DA 2 2 2 DA DA D . n D 2 3 DA 3 3 3 DA DA D . n D 2 4 DA 4 4 4 DA DA D . n D 2 5 DA 5 5 5 DA DA D . n D 2 6 DA 6 6 6 DA DA D . n D 2 7 DA 7 7 7 DA DA D . n D 2 8 DA 8 8 8 DA DA D . n D 2 9 DA 9 9 9 DA DA D . n D 2 10 DA 10 10 10 DA DA D . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1EJE _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1EJE _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 A1EJE 1 201 203 A1EJE LIG A . F 4 GOL 1 202 201 GOL GOL A . G 3 A1EJE 1 201 204 A1EJE LIG B . H 4 GOL 1 202 201 GOL GOL B . I 5 HOH 1 301 24 HOH HOH A . I 5 HOH 2 302 20 HOH HOH A . I 5 HOH 3 303 4 HOH HOH A . I 5 HOH 4 304 33 HOH HOH A . I 5 HOH 5 305 9 HOH HOH A . I 5 HOH 6 306 6 HOH HOH A . I 5 HOH 7 307 11 HOH HOH A . I 5 HOH 8 308 19 HOH HOH A . I 5 HOH 9 309 3 HOH HOH A . I 5 HOH 10 310 95 HOH HOH A . I 5 HOH 11 311 7 HOH HOH A . I 5 HOH 12 312 28 HOH HOH A . I 5 HOH 13 313 27 HOH HOH A . I 5 HOH 14 314 49 HOH HOH A . I 5 HOH 15 315 16 HOH HOH A . I 5 HOH 16 316 96 HOH HOH A . J 5 HOH 1 301 53 HOH HOH B . J 5 HOH 2 302 51 HOH HOH B . J 5 HOH 3 303 63 HOH HOH B . J 5 HOH 4 304 70 HOH HOH B . J 5 HOH 5 305 66 HOH HOH B . J 5 HOH 6 306 74 HOH HOH B . J 5 HOH 7 307 55 HOH HOH B . J 5 HOH 8 308 52 HOH HOH B . J 5 HOH 9 309 59 HOH HOH B . J 5 HOH 10 310 60 HOH HOH B . J 5 HOH 11 311 94 HOH HOH B . J 5 HOH 12 312 73 HOH HOH B . J 5 HOH 13 313 64 HOH HOH B . J 5 HOH 14 314 78 HOH HOH B . J 5 HOH 15 315 83 HOH HOH B . J 5 HOH 16 316 90 HOH HOH B . J 5 HOH 17 317 86 HOH HOH B . J 5 HOH 18 318 57 HOH HOH B . J 5 HOH 19 319 68 HOH HOH B . J 5 HOH 20 320 32 HOH HOH B . K 5 HOH 1 101 54 HOH HOH C . L 5 HOH 1 101 5 HOH HOH D . L 5 HOH 2 102 85 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 6 ? CG ? A LYS 6 CG 2 1 Y 1 A LYS 6 ? CD ? A LYS 6 CD 3 1 Y 1 A LYS 6 ? CE ? A LYS 6 CE 4 1 Y 1 A LYS 6 ? NZ ? A LYS 6 NZ 5 1 Y 1 A ARG 7 ? CG ? A ARG 7 CG 6 1 Y 1 A ARG 7 ? CD ? A ARG 7 CD 7 1 Y 1 A ARG 7 ? NE ? A ARG 7 NE 8 1 Y 1 A ARG 7 ? CZ ? A ARG 7 CZ 9 1 Y 1 A ARG 7 ? NH1 ? A ARG 7 NH1 10 1 Y 1 A ARG 7 ? NH2 ? A ARG 7 NH2 11 1 Y 1 A GLU 21 ? CG ? A GLU 21 CG 12 1 Y 1 A GLU 21 ? CD ? A GLU 21 CD 13 1 Y 1 A GLU 21 ? OE1 ? A GLU 21 OE1 14 1 Y 1 A GLU 21 ? OE2 ? A GLU 21 OE2 15 1 Y 1 A GLU 22 ? CD ? A GLU 22 CD 16 1 Y 1 A GLU 22 ? OE1 ? A GLU 22 OE1 17 1 Y 1 A GLU 22 ? OE2 ? A GLU 22 OE2 18 1 Y 1 A ARG 26 ? CG ? A ARG 26 CG 19 1 Y 1 A ARG 26 ? CD ? A ARG 26 CD 20 1 Y 1 A ARG 26 ? NE ? A ARG 26 NE 21 1 Y 1 A ARG 26 ? CZ ? A ARG 26 CZ 22 1 Y 1 A ARG 26 ? NH1 ? A ARG 26 NH1 23 1 Y 1 A ARG 26 ? NH2 ? A ARG 26 NH2 24 1 Y 1 A LEU 35 ? CG ? A LEU 35 CG 25 1 Y 1 A LEU 35 ? CD1 ? A LEU 35 CD1 26 1 Y 1 A LEU 35 ? CD2 ? A LEU 35 CD2 27 1 Y 1 A ASN 36 ? CG ? A ASN 36 CG 28 1 Y 1 A ASN 36 ? OD1 ? A ASN 36 OD1 29 1 Y 1 A ASN 36 ? ND2 ? A ASN 36 ND2 30 1 Y 1 A GLU 37 ? CG ? A GLU 37 CG 31 1 Y 1 A GLU 37 ? CD ? A GLU 37 CD 32 1 Y 1 A GLU 37 ? OE1 ? A GLU 37 OE1 33 1 Y 1 A GLU 37 ? OE2 ? A GLU 37 OE2 34 1 Y 1 A ASN 40 ? CG ? A ASN 40 CG 35 1 Y 1 A ASN 40 ? OD1 ? A ASN 40 OD1 36 1 Y 1 A ASN 40 ? ND2 ? A ASN 40 ND2 37 1 Y 1 A GLU 48 ? CG ? A GLU 48 CG 38 1 Y 1 A GLU 48 ? CD ? A GLU 48 CD 39 1 Y 1 A GLU 48 ? OE1 ? A GLU 48 OE1 40 1 Y 1 A GLU 48 ? OE2 ? A GLU 48 OE2 41 1 Y 1 A GLU 51 ? CG ? A GLU 51 CG 42 1 Y 1 A GLU 51 ? CD ? A GLU 51 CD 43 1 Y 1 A GLU 51 ? OE1 ? A GLU 51 OE1 44 1 Y 1 A GLU 51 ? OE2 ? A GLU 51 OE2 45 1 Y 1 A GLU 52 ? CG ? A GLU 52 CG 46 1 Y 1 A GLU 52 ? CD ? A GLU 52 CD 47 1 Y 1 A GLU 52 ? OE1 ? A GLU 52 OE1 48 1 Y 1 A GLU 52 ? OE2 ? A GLU 52 OE2 49 1 Y 1 A ARG 55 ? CG ? A ARG 55 CG 50 1 Y 1 A ARG 55 ? CD ? A ARG 55 CD 51 1 Y 1 A ARG 55 ? NE ? A ARG 55 NE 52 1 Y 1 A ARG 55 ? CZ ? A ARG 55 CZ 53 1 Y 1 A ARG 55 ? NH1 ? A ARG 55 NH1 54 1 Y 1 A ARG 55 ? NH2 ? A ARG 55 NH2 55 1 Y 1 A GLU 56 ? CG ? A GLU 56 CG 56 1 Y 1 A GLU 56 ? CD ? A GLU 56 CD 57 1 Y 1 A GLU 56 ? OE1 ? A GLU 56 OE1 58 1 Y 1 A GLU 56 ? OE2 ? A GLU 56 OE2 59 1 Y 1 A GLU 59 ? CG ? A GLU 59 CG 60 1 Y 1 A GLU 59 ? CD ? A GLU 59 CD 61 1 Y 1 A GLU 59 ? OE1 ? A GLU 59 OE1 62 1 Y 1 A GLU 59 ? OE2 ? A GLU 59 OE2 63 1 Y 1 A ASP 71 ? CG ? A ASP 71 CG 64 1 Y 1 A ASP 71 ? OD1 ? A ASP 71 OD1 65 1 Y 1 A ASP 71 ? OD2 ? A ASP 71 OD2 66 1 Y 1 A GLU 88 ? CG ? A GLU 88 CG 67 1 Y 1 A GLU 88 ? CD ? A GLU 88 CD 68 1 Y 1 A GLU 88 ? OE1 ? A GLU 88 OE1 69 1 Y 1 A GLU 88 ? OE2 ? A GLU 88 OE2 70 1 Y 1 A ARG 94 ? CZ ? A ARG 94 CZ 71 1 Y 1 A ARG 94 ? NH1 ? A ARG 94 NH1 72 1 Y 1 A ARG 94 ? NH2 ? A ARG 94 NH2 73 1 Y 1 A LYS 110 ? CG ? A LYS 110 CG 74 1 Y 1 A LYS 110 ? CD ? A LYS 110 CD 75 1 Y 1 A LYS 110 ? CE ? A LYS 110 CE 76 1 Y 1 A LYS 110 ? NZ ? A LYS 110 NZ 77 1 Y 1 A GLU 132 ? CG ? A GLU 132 CG 78 1 Y 1 A GLU 132 ? CD ? A GLU 132 CD 79 1 Y 1 A GLU 132 ? OE1 ? A GLU 132 OE1 80 1 Y 1 A GLU 132 ? OE2 ? A GLU 132 OE2 81 1 Y 1 A ARG 135 ? CD ? A ARG 135 CD 82 1 Y 1 A ARG 135 ? NE ? A ARG 135 NE 83 1 Y 1 A ARG 135 ? CZ ? A ARG 135 CZ 84 1 Y 1 A ARG 135 ? NH1 ? A ARG 135 NH1 85 1 Y 1 A ARG 135 ? NH2 ? A ARG 135 NH2 86 1 Y 1 A ARG 139 ? CG ? A ARG 139 CG 87 1 Y 1 A ARG 139 ? CD ? A ARG 139 CD 88 1 Y 1 A ARG 139 ? NE ? A ARG 139 NE 89 1 Y 1 A ARG 139 ? CZ ? A ARG 139 CZ 90 1 Y 1 A ARG 139 ? NH1 ? A ARG 139 NH1 91 1 Y 1 A ARG 139 ? NH2 ? A ARG 139 NH2 92 1 Y 1 B ARG 5 ? CG ? B ARG 5 CG 93 1 Y 1 B ARG 5 ? CD ? B ARG 5 CD 94 1 Y 1 B ARG 5 ? NE ? B ARG 5 NE 95 1 Y 1 B ARG 5 ? CZ ? B ARG 5 CZ 96 1 Y 1 B ARG 5 ? NH1 ? B ARG 5 NH1 97 1 Y 1 B ARG 5 ? NH2 ? B ARG 5 NH2 98 1 Y 1 B LYS 6 ? CG ? B LYS 6 CG 99 1 Y 1 B LYS 6 ? CD ? B LYS 6 CD 100 1 Y 1 B LYS 6 ? CE ? B LYS 6 CE 101 1 Y 1 B LYS 6 ? NZ ? B LYS 6 NZ 102 1 Y 1 B ARG 7 ? CG ? B ARG 7 CG 103 1 Y 1 B ARG 7 ? CD ? B ARG 7 CD 104 1 Y 1 B ARG 7 ? NE ? B ARG 7 NE 105 1 Y 1 B ARG 7 ? CZ ? B ARG 7 CZ 106 1 Y 1 B ARG 7 ? NH1 ? B ARG 7 NH1 107 1 Y 1 B ARG 7 ? NH2 ? B ARG 7 NH2 108 1 Y 1 B GLU 21 ? CG ? B GLU 21 CG 109 1 Y 1 B GLU 21 ? CD ? B GLU 21 CD 110 1 Y 1 B GLU 21 ? OE1 ? B GLU 21 OE1 111 1 Y 1 B GLU 21 ? OE2 ? B GLU 21 OE2 112 1 Y 1 B GLU 22 ? CD ? B GLU 22 CD 113 1 Y 1 B GLU 22 ? OE1 ? B GLU 22 OE1 114 1 Y 1 B GLU 22 ? OE2 ? B GLU 22 OE2 115 1 Y 1 B ARG 26 ? CG ? B ARG 26 CG 116 1 Y 1 B ARG 26 ? CD ? B ARG 26 CD 117 1 Y 1 B ARG 26 ? NE ? B ARG 26 NE 118 1 Y 1 B ARG 26 ? CZ ? B ARG 26 CZ 119 1 Y 1 B ARG 26 ? NH1 ? B ARG 26 NH1 120 1 Y 1 B ARG 26 ? NH2 ? B ARG 26 NH2 121 1 Y 1 B ASN 36 ? CG ? B ASN 36 CG 122 1 Y 1 B ASN 36 ? OD1 ? B ASN 36 OD1 123 1 Y 1 B ASN 36 ? ND2 ? B ASN 36 ND2 124 1 Y 1 B GLU 48 ? CG ? B GLU 48 CG 125 1 Y 1 B GLU 48 ? CD ? B GLU 48 CD 126 1 Y 1 B GLU 48 ? OE1 ? B GLU 48 OE1 127 1 Y 1 B GLU 48 ? OE2 ? B GLU 48 OE2 128 1 Y 1 B GLU 52 ? CG ? B GLU 52 CG 129 1 Y 1 B GLU 52 ? CD ? B GLU 52 CD 130 1 Y 1 B GLU 52 ? OE1 ? B GLU 52 OE1 131 1 Y 1 B GLU 52 ? OE2 ? B GLU 52 OE2 132 1 Y 1 B ASP 71 ? CG ? B ASP 71 CG 133 1 Y 1 B ASP 71 ? OD1 ? B ASP 71 OD1 134 1 Y 1 B ASP 71 ? OD2 ? B ASP 71 OD2 135 1 Y 1 B ARG 72 ? NE ? B ARG 72 NE 136 1 Y 1 B ARG 72 ? CZ ? B ARG 72 CZ 137 1 Y 1 B ARG 72 ? NH1 ? B ARG 72 NH1 138 1 Y 1 B ARG 72 ? NH2 ? B ARG 72 NH2 139 1 Y 1 B GLU 88 ? CG ? B GLU 88 CG 140 1 Y 1 B GLU 88 ? CD ? B GLU 88 CD 141 1 Y 1 B GLU 88 ? OE1 ? B GLU 88 OE1 142 1 Y 1 B GLU 88 ? OE2 ? B GLU 88 OE2 143 1 Y 1 B LYS 114 ? CD ? B LYS 114 CD 144 1 Y 1 B LYS 114 ? CE ? B LYS 114 CE 145 1 Y 1 B LYS 114 ? NZ ? B LYS 114 NZ 146 1 Y 1 B ARG 135 ? NE ? B ARG 135 NE 147 1 Y 1 B ARG 135 ? CZ ? B ARG 135 CZ 148 1 Y 1 B ARG 135 ? NH1 ? B ARG 135 NH1 149 1 Y 1 B ARG 135 ? NH2 ? B ARG 135 NH2 150 1 Y 1 B ARG 139 ? CG ? B ARG 139 CG 151 1 Y 1 B ARG 139 ? CD ? B ARG 139 CD 152 1 Y 1 B ARG 139 ? NE ? B ARG 139 NE 153 1 Y 1 B ARG 139 ? CZ ? B ARG 139 CZ 154 1 Y 1 B ARG 139 ? NH1 ? B ARG 139 NH1 155 1 Y 1 B ARG 139 ? NH2 ? B ARG 139 NH2 156 1 Y 1 B LYS 153 ? CG ? B LYS 153 CG 157 1 Y 1 B LYS 153 ? CD ? B LYS 153 CD 158 1 Y 1 B LYS 153 ? CE ? B LYS 153 CE 159 1 Y 1 B LYS 153 ? NZ ? B LYS 153 NZ 160 1 Y 1 B LYS 157 ? CG ? B LYS 157 CG 161 1 Y 1 B LYS 157 ? CD ? B LYS 157 CD 162 1 Y 1 B LYS 157 ? CE ? B LYS 157 CE 163 1 Y 1 B LYS 157 ? NZ ? B LYS 157 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.19.1_4122: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 94.04 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9LDG _cell.details ? _cell.formula_units_Z ? _cell.length_a 60.078 _cell.length_a_esd ? _cell.length_b 59.397 _cell.length_b_esd ? _cell.length_c 65.749 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9LDG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9LDG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;200 mM Calcium acetate 20% w/v PEG 3350 pH 7.5 ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 300 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-01-27 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL10U2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL10U2 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9LDG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.26 _reflns.d_resolution_low 65.59 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18988 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 86.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.800 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.142 _reflns.pdbx_Rpim_I_all 0.082 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.980 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.26 _reflns_shell.d_res_low 2.38 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.100 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1718 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.154 _reflns_shell.pdbx_Rpim_I_all 0.762 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.415 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.861 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9LDG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.40 _refine.ls_d_res_low 29.66 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16794 _refine.ls_number_reflns_R_free 840 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 91.96 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2386 _refine.ls_R_factor_R_free 0.2896 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2359 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 35.24 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.36 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 29.66 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 3273 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2730 _refine_hist.pdbx_number_atoms_nucleic_acid 414 _refine_hist.pdbx_number_atoms_ligand 90 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 3354 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.663 ? 4646 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.732 ? 659 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.045 ? 526 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 520 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.40 2.55 . . 117 2202 77.00 . . . . 0.3413 . . . . . . . . . . . 0.3650 'X-RAY DIFFRACTION' 2.55 2.75 . . 161 2619 92.00 . . . . 0.3064 . . . . . . . . . . . 0.3960 'X-RAY DIFFRACTION' 2.75 3.02 . . 130 2727 94.00 . . . . 0.2864 . . . . . . . . . . . 0.3747 'X-RAY DIFFRACTION' 3.02 3.46 . . 128 2800 97.00 . . . . 0.2365 . . . . . . . . . . . 0.2692 'X-RAY DIFFRACTION' 3.46 4.36 . . 161 2784 97.00 . . . . 0.2091 . . . . . . . . . . . 0.2722 'X-RAY DIFFRACTION' 4.36 29.66 . . 143 2822 95.00 . . . . 0.2053 . . . . . . . . . . . 0.2477 # _struct.entry_id 9LDG _struct.title 'The structure of TkoKptA/DNA/Appr>P complex-B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9LDG _struct_keywords.text 'Kpta, complex, DNA, Appr>p, TRANSFERASE/DNA, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP KPTA_THEKO Q5JFX3 ? 1 ;MKPERKRVSKLMAYILRHSPEEFGLRPDVEGFVSLNELVNALKTVYPEVTEEFVREIVENDPKGRYEIRGDRIRARYGHS FPVSLDHEEDTESRFLYHGTPRRNLPSILKEGLKPMKRQYVHVSTDKIEALETGRRHGREVVLLVIDAECLRKRGFKIYK AGKNVRIVERVPPDCITLAV ; 1 2 PDB 9LDG 9LDG ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9LDG A 1 ? 180 ? Q5JFX3 1 ? 180 ? 1 180 2 1 9LDG B 1 ? 180 ? Q5JFX3 1 ? 180 ? 1 180 3 2 9LDG C 1 ? 10 ? 9LDG 1 ? 10 ? 1 10 4 2 9LDG D 1 ? 10 ? 9LDG 1 ? 10 ? 1 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 4 ? HIS A 18 ? GLU A 4 HIS A 18 1 ? 15 HELX_P HELX_P2 AA2 PRO A 20 ? GLY A 24 ? PRO A 20 GLY A 24 5 ? 5 HELX_P HELX_P3 AA3 LEU A 35 ? TYR A 46 ? LEU A 35 TYR A 46 1 ? 12 HELX_P HELX_P4 AA4 THR A 50 ? ASP A 61 ? THR A 50 ASP A 61 1 ? 12 HELX_P HELX_P5 AA5 ASN A 104 ? GLY A 112 ? ASN A 104 GLY A 112 1 ? 9 HELX_P HELX_P6 AA6 ASP A 126 ? ARG A 135 ? ASP A 126 ARG A 135 1 ? 10 HELX_P HELX_P7 AA7 ALA A 148 ? ARG A 154 ? ALA A 148 ARG A 154 1 ? 7 HELX_P HELX_P8 AA8 PRO A 172 ? ASP A 174 ? PRO A 172 ASP A 174 5 ? 3 HELX_P HELX_P9 AA9 LYS B 6 ? HIS B 18 ? LYS B 6 HIS B 18 1 ? 13 HELX_P HELX_P10 AB1 PRO B 20 ? GLY B 24 ? PRO B 20 GLY B 24 5 ? 5 HELX_P HELX_P11 AB2 LEU B 35 ? TYR B 46 ? LEU B 35 TYR B 46 1 ? 12 HELX_P HELX_P12 AB3 THR B 50 ? ASP B 61 ? THR B 50 ASP B 61 1 ? 12 HELX_P HELX_P13 AB4 ASN B 104 ? GLY B 112 ? ASN B 104 GLY B 112 1 ? 9 HELX_P HELX_P14 AB5 ASP B 126 ? ARG B 135 ? ASP B 126 ARG B 135 1 ? 10 HELX_P HELX_P15 AB6 ALA B 148 ? ARG B 154 ? ALA B 148 ARG B 154 1 ? 7 HELX_P HELX_P16 AB7 PRO B 172 ? ASP B 174 ? PRO B 172 ASP B 174 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 150 SG ? ? ? 1_555 A CYS 175 SG ? ? A CYS 150 A CYS 175 1_555 ? ? ? ? ? ? ? 2.212 ? ? disulf2 disulf ? ? B CYS 150 SG ? ? ? 1_555 B CYS 175 SG ? ? B CYS 150 B CYS 175 1_555 ? ? ? ? ? ? ? 2.234 ? ? hydrog1 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DA 10 N1 ? ? C DA 3 D DA 10 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog2 hydrog ? ? C DA 3 N7 ? ? ? 1_555 D DA 10 N6 ? ? C DA 3 D DA 10 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog3 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DA 9 N6 ? ? C DA 4 D DA 9 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog4 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DA 9 N7 ? ? C DA 4 D DA 9 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog5 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DA 8 N1 ? ? C DA 5 D DA 8 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog6 hydrog ? ? C DA 5 N7 ? ? ? 1_555 D DA 8 N6 ? ? C DA 5 D DA 8 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog7 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DA 7 N7 ? ? C DA 6 D DA 7 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog8 hydrog ? ? C DA 6 N7 ? ? ? 1_555 D DA 7 N6 ? ? C DA 6 D DA 7 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog9 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DA 6 N7 ? ? C DA 7 D DA 6 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog10 hydrog ? ? C DA 7 N7 ? ? ? 1_555 D DA 6 N6 ? ? C DA 7 D DA 6 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog11 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DA 5 N6 ? ? C DA 8 D DA 5 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog12 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DA 5 N7 ? ? C DA 8 D DA 5 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog13 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DA 4 N1 ? ? C DA 9 D DA 4 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog14 hydrog ? ? C DA 9 N7 ? ? ? 1_555 D DA 4 N6 ? ? C DA 9 D DA 4 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog15 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DA 3 N6 ? ? C DA 10 D DA 3 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog16 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DA 3 N7 ? ? C DA 10 D DA 3 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 150 ? CYS A 175 ? CYS A 150 ? 1_555 CYS A 175 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 150 ? CYS B 175 ? CYS B 150 ? 1_555 CYS B 175 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 3 ? AA6 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 33 ? SER A 34 ? VAL A 33 SER A 34 AA1 2 ARG A 72 ? ALA A 75 ? ARG A 72 ALA A 75 AA1 3 TYR A 66 ? ARG A 69 ? TYR A 66 ARG A 69 AA2 1 PHE A 95 ? PRO A 101 ? PHE A 95 PRO A 101 AA2 2 VAL A 141 ? ASP A 147 ? VAL A 141 ASP A 147 AA2 3 ILE A 176 ? ALA A 179 ? ILE A 176 ALA A 179 AA3 1 VAL A 121 ? SER A 124 ? VAL A 121 SER A 124 AA3 2 VAL A 165 ? VAL A 168 ? VAL A 165 VAL A 168 AA3 3 TYR A 159 ? LYS A 160 ? TYR A 159 LYS A 160 AA4 1 VAL B 33 ? SER B 34 ? VAL B 33 SER B 34 AA4 2 ARG B 72 ? ALA B 75 ? ARG B 72 ALA B 75 AA4 3 TYR B 66 ? ARG B 69 ? TYR B 66 ARG B 69 AA5 1 PHE B 95 ? PRO B 101 ? PHE B 95 PRO B 101 AA5 2 VAL B 141 ? ASP B 147 ? VAL B 141 ASP B 147 AA5 3 ILE B 176 ? VAL B 180 ? ILE B 176 VAL B 180 AA6 1 VAL B 121 ? SER B 124 ? VAL B 121 SER B 124 AA6 2 VAL B 165 ? VAL B 168 ? VAL B 165 VAL B 168 AA6 3 TYR B 159 ? LYS B 160 ? TYR B 159 LYS B 160 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 33 ? N VAL A 33 O ILE A 73 ? O ILE A 73 AA1 2 3 O ARG A 74 ? O ARG A 74 N GLU A 67 ? N GLU A 67 AA2 1 2 N HIS A 98 ? N HIS A 98 O LEU A 144 ? O LEU A 144 AA2 2 3 N VAL A 145 ? N VAL A 145 O LEU A 178 ? O LEU A 178 AA3 1 2 N VAL A 123 ? N VAL A 123 O ARG A 166 ? O ARG A 166 AA3 2 3 O ILE A 167 ? O ILE A 167 N TYR A 159 ? N TYR A 159 AA4 1 2 N VAL B 33 ? N VAL B 33 O ILE B 73 ? O ILE B 73 AA4 2 3 O ARG B 74 ? O ARG B 74 N GLU B 67 ? N GLU B 67 AA5 1 2 N THR B 100 ? N THR B 100 O VAL B 142 ? O VAL B 142 AA5 2 3 N LEU B 143 ? N LEU B 143 O VAL B 180 ? O VAL B 180 AA6 1 2 N VAL B 123 ? N VAL B 123 O ARG B 166 ? O ARG B 166 AA6 2 3 O ILE B 167 ? O ILE B 167 N TYR B 159 ? N TYR B 159 # _pdbx_entry_details.entry_id 9LDG _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 18 ? ? -127.09 -54.79 2 1 TYR A 77 ? ? -165.75 -167.21 3 1 MET A 116 ? ? 64.63 -125.79 4 1 HIS B 18 ? ? -127.48 -53.82 5 1 TYR B 77 ? ? -160.76 -167.98 6 1 MET B 116 ? ? 61.63 -125.46 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -5.6607 -61.1953 -31.4350 0.7259 ? 0.0905 ? 0.0399 ? 0.2648 ? -0.0450 ? 0.3137 ? 2.8219 ? 0.6943 ? 0.8781 ? 1.4921 ? 0.2746 ? 2.8935 ? -0.0025 ? 0.0527 ? 0.1814 ? -0.2168 ? -0.1301 ? 0.1469 ? -0.4833 ? -0.3300 ? 0.1313 ? 2 'X-RAY DIFFRACTION' ? refined -8.0703 -102.5502 -2.4549 0.6538 ? -0.0862 ? 0.0131 ? 0.2406 ? -0.0434 ? 0.3271 ? 3.0543 ? -0.3716 ? -1.2062 ? 0.8381 ? -0.1091 ? 2.8343 ? -0.0922 ? 0.0347 ? -0.2041 ? 0.0971 ? -0.0425 ? 0.1670 ? 0.1968 ? -0.2573 ? 0.1416 ? 3 'X-RAY DIFFRACTION' ? refined -15.9744 -80.4990 -21.1516 1.7519 ? -0.3830 ? -0.1530 ? 0.9403 ? 0.3687 ? 0.7595 ? 2.6675 ? 1.8870 ? -1.6025 ? 5.1160 ? -2.7583 ? 1.6282 ? -0.0589 ? -0.6761 ? -0.5584 ? -0.1022 ? 1.0363 ? 1.5319 ? 1.7421 ? -1.4055 ? -1.0800 ? 4 'X-RAY DIFFRACTION' ? refined -16.9021 -83.4463 -14.4444 1.3980 ? -0.0995 ? -0.1434 ? 0.9228 ? 0.2192 ? 0.6959 ? 4.5608 ? 3.5952 ? -3.7268 ? 9.5468 ? -7.2346 ? 5.8043 ? 0.1840 ? 1.0766 ? 0.8752 ? -0.2914 ? 0.9539 ? 1.8699 ? -1.3981 ? -0.9068 ? -1.4784 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? '(chain A and resseq 4:180)' 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? '(chain B and resseq 5:180)' 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? '(chain C and resseq 1:10)' 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? '(chain D and resseq 1:10)' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LYS 2 ? A LYS 2 3 1 Y 1 A PRO 3 ? A PRO 3 4 1 Y 1 B MET 1 ? B MET 1 5 1 Y 1 B LYS 2 ? B LYS 2 6 1 Y 1 B PRO 3 ? B PRO 3 7 1 Y 1 B GLU 4 ? B GLU 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1EJE N1 N N N 1 A1EJE N3 N Y N 2 A1EJE C4 C Y N 3 A1EJE C6 C Y N 4 A1EJE C7 C Y N 5 A1EJE C13 C N R 6 A1EJE C24 C N N 7 A1EJE C11 C N R 8 A1EJE C14 C N N 9 A1EJE C2 C Y N 10 A1EJE C25 C N R 11 A1EJE C27 C N R 12 A1EJE C33 C N R 13 A1EJE C34 C N R 14 A1EJE C36 C N S 15 A1EJE C38 C N R 16 A1EJE C9 C Y N 17 A1EJE N10 N Y N 18 A1EJE N5 N Y N 19 A1EJE N8 N Y N 20 A1EJE O12 O N N 21 A1EJE O15 O N N 22 A1EJE O17 O N N 23 A1EJE O18 O N N 24 A1EJE O19 O N N 25 A1EJE O21 O N N 26 A1EJE O22 O N N 27 A1EJE O23 O N N 28 A1EJE O26 O N N 29 A1EJE O28 O N N 30 A1EJE O30 O N N 31 A1EJE O31 O N N 32 A1EJE O32 O N N 33 A1EJE O35 O N N 34 A1EJE O37 O N N 35 A1EJE O39 O N N 36 A1EJE P16 P N N 37 A1EJE P20 P N N 38 A1EJE P29 P N N 39 A1EJE H1 H N N 40 A1EJE H2 H N N 41 A1EJE H3 H N N 42 A1EJE H4 H N N 43 A1EJE H5 H N N 44 A1EJE H6 H N N 45 A1EJE H7 H N N 46 A1EJE H8 H N N 47 A1EJE H9 H N N 48 A1EJE H10 H N N 49 A1EJE H11 H N N 50 A1EJE H12 H N N 51 A1EJE H13 H N N 52 A1EJE H14 H N N 53 A1EJE H15 H N N 54 A1EJE H16 H N N 55 A1EJE H17 H N N 56 A1EJE H18 H N N 57 A1EJE H19 H N N 58 A1EJE H20 H N N 59 A1EJE H21 H N N 60 A1EJE H22 H N N 61 ALA N N N N 62 ALA CA C N S 63 ALA C C N N 64 ALA O O N N 65 ALA CB C N N 66 ALA OXT O N N 67 ALA H H N N 68 ALA H2 H N N 69 ALA HA H N N 70 ALA HB1 H N N 71 ALA HB2 H N N 72 ALA HB3 H N N 73 ALA HXT H N N 74 ARG N N N N 75 ARG CA C N S 76 ARG C C N N 77 ARG O O N N 78 ARG CB C N N 79 ARG CG C N N 80 ARG CD C N N 81 ARG NE N N N 82 ARG CZ C N N 83 ARG NH1 N N N 84 ARG NH2 N N N 85 ARG OXT O N N 86 ARG H H N N 87 ARG H2 H N N 88 ARG HA H N N 89 ARG HB2 H N N 90 ARG HB3 H N N 91 ARG HG2 H N N 92 ARG HG3 H N N 93 ARG HD2 H N N 94 ARG HD3 H N N 95 ARG HE H N N 96 ARG HH11 H N N 97 ARG HH12 H N N 98 ARG HH21 H N N 99 ARG HH22 H N N 100 ARG HXT H N N 101 ASN N N N N 102 ASN CA C N S 103 ASN C C N N 104 ASN O O N N 105 ASN CB C N N 106 ASN CG C N N 107 ASN OD1 O N N 108 ASN ND2 N N N 109 ASN OXT O N N 110 ASN H H N N 111 ASN H2 H N N 112 ASN HA H N N 113 ASN HB2 H N N 114 ASN HB3 H N N 115 ASN HD21 H N N 116 ASN HD22 H N N 117 ASN HXT H N N 118 ASP N N N N 119 ASP CA C N S 120 ASP C C N N 121 ASP O O N N 122 ASP CB C N N 123 ASP CG C N N 124 ASP OD1 O N N 125 ASP OD2 O N N 126 ASP OXT O N N 127 ASP H H N N 128 ASP H2 H N N 129 ASP HA H N N 130 ASP HB2 H N N 131 ASP HB3 H N N 132 ASP HD2 H N N 133 ASP HXT H N N 134 CYS N N N N 135 CYS CA C N R 136 CYS C C N N 137 CYS O O N N 138 CYS CB C N N 139 CYS SG S N N 140 CYS OXT O N N 141 CYS H H N N 142 CYS H2 H N N 143 CYS HA H N N 144 CYS HB2 H N N 145 CYS HB3 H N N 146 CYS HG H N N 147 CYS HXT H N N 148 DA OP3 O N N 149 DA P P N N 150 DA OP1 O N N 151 DA OP2 O N N 152 DA "O5'" O N N 153 DA "C5'" C N N 154 DA "C4'" C N R 155 DA "O4'" O N N 156 DA "C3'" C N S 157 DA "O3'" O N N 158 DA "C2'" C N N 159 DA "C1'" C N R 160 DA N9 N Y N 161 DA C8 C Y N 162 DA N7 N Y N 163 DA C5 C Y N 164 DA C6 C Y N 165 DA N6 N N N 166 DA N1 N Y N 167 DA C2 C Y N 168 DA N3 N Y N 169 DA C4 C Y N 170 DA HOP3 H N N 171 DA HOP2 H N N 172 DA "H5'" H N N 173 DA "H5''" H N N 174 DA "H4'" H N N 175 DA "H3'" H N N 176 DA "HO3'" H N N 177 DA "H2'" H N N 178 DA "H2''" H N N 179 DA "H1'" H N N 180 DA H8 H N N 181 DA H61 H N N 182 DA H62 H N N 183 DA H2 H N N 184 GLN N N N N 185 GLN CA C N S 186 GLN C C N N 187 GLN O O N N 188 GLN CB C N N 189 GLN CG C N N 190 GLN CD C N N 191 GLN OE1 O N N 192 GLN NE2 N N N 193 GLN OXT O N N 194 GLN H H N N 195 GLN H2 H N N 196 GLN HA H N N 197 GLN HB2 H N N 198 GLN HB3 H N N 199 GLN HG2 H N N 200 GLN HG3 H N N 201 GLN HE21 H N N 202 GLN HE22 H N N 203 GLN HXT H N N 204 GLU N N N N 205 GLU CA C N S 206 GLU C C N N 207 GLU O O N N 208 GLU CB C N N 209 GLU CG C N N 210 GLU CD C N N 211 GLU OE1 O N N 212 GLU OE2 O N N 213 GLU OXT O N N 214 GLU H H N N 215 GLU H2 H N N 216 GLU HA H N N 217 GLU HB2 H N N 218 GLU HB3 H N N 219 GLU HG2 H N N 220 GLU HG3 H N N 221 GLU HE2 H N N 222 GLU HXT H N N 223 GLY N N N N 224 GLY CA C N N 225 GLY C C N N 226 GLY O O N N 227 GLY OXT O N N 228 GLY H H N N 229 GLY H2 H N N 230 GLY HA2 H N N 231 GLY HA3 H N N 232 GLY HXT H N N 233 GOL C1 C N N 234 GOL O1 O N N 235 GOL C2 C N N 236 GOL O2 O N N 237 GOL C3 C N N 238 GOL O3 O N N 239 GOL H11 H N N 240 GOL H12 H N N 241 GOL HO1 H N N 242 GOL H2 H N N 243 GOL HO2 H N N 244 GOL H31 H N N 245 GOL H32 H N N 246 GOL HO3 H N N 247 HIS N N N N 248 HIS CA C N S 249 HIS C C N N 250 HIS O O N N 251 HIS CB C N N 252 HIS CG C Y N 253 HIS ND1 N Y N 254 HIS CD2 C Y N 255 HIS CE1 C Y N 256 HIS NE2 N Y N 257 HIS OXT O N N 258 HIS H H N N 259 HIS H2 H N N 260 HIS HA H N N 261 HIS HB2 H N N 262 HIS HB3 H N N 263 HIS HD1 H N N 264 HIS HD2 H N N 265 HIS HE1 H N N 266 HIS HE2 H N N 267 HIS HXT H N N 268 HOH O O N N 269 HOH H1 H N N 270 HOH H2 H N N 271 ILE N N N N 272 ILE CA C N S 273 ILE C C N N 274 ILE O O N N 275 ILE CB C N S 276 ILE CG1 C N N 277 ILE CG2 C N N 278 ILE CD1 C N N 279 ILE OXT O N N 280 ILE H H N N 281 ILE H2 H N N 282 ILE HA H N N 283 ILE HB H N N 284 ILE HG12 H N N 285 ILE HG13 H N N 286 ILE HG21 H N N 287 ILE HG22 H N N 288 ILE HG23 H N N 289 ILE HD11 H N N 290 ILE HD12 H N N 291 ILE HD13 H N N 292 ILE HXT H N N 293 LEU N N N N 294 LEU CA C N S 295 LEU C C N N 296 LEU O O N N 297 LEU CB C N N 298 LEU CG C N N 299 LEU CD1 C N N 300 LEU CD2 C N N 301 LEU OXT O N N 302 LEU H H N N 303 LEU H2 H N N 304 LEU HA H N N 305 LEU HB2 H N N 306 LEU HB3 H N N 307 LEU HG H N N 308 LEU HD11 H N N 309 LEU HD12 H N N 310 LEU HD13 H N N 311 LEU HD21 H N N 312 LEU HD22 H N N 313 LEU HD23 H N N 314 LEU HXT H N N 315 LYS N N N N 316 LYS CA C N S 317 LYS C C N N 318 LYS O O N N 319 LYS CB C N N 320 LYS CG C N N 321 LYS CD C N N 322 LYS CE C N N 323 LYS NZ N N N 324 LYS OXT O N N 325 LYS H H N N 326 LYS H2 H N N 327 LYS HA H N N 328 LYS HB2 H N N 329 LYS HB3 H N N 330 LYS HG2 H N N 331 LYS HG3 H N N 332 LYS HD2 H N N 333 LYS HD3 H N N 334 LYS HE2 H N N 335 LYS HE3 H N N 336 LYS HZ1 H N N 337 LYS HZ2 H N N 338 LYS HZ3 H N N 339 LYS HXT H N N 340 MET N N N N 341 MET CA C N S 342 MET C C N N 343 MET O O N N 344 MET CB C N N 345 MET CG C N N 346 MET SD S N N 347 MET CE C N N 348 MET OXT O N N 349 MET H H N N 350 MET H2 H N N 351 MET HA H N N 352 MET HB2 H N N 353 MET HB3 H N N 354 MET HG2 H N N 355 MET HG3 H N N 356 MET HE1 H N N 357 MET HE2 H N N 358 MET HE3 H N N 359 MET HXT H N N 360 PHE N N N N 361 PHE CA C N S 362 PHE C C N N 363 PHE O O N N 364 PHE CB C N N 365 PHE CG C Y N 366 PHE CD1 C Y N 367 PHE CD2 C Y N 368 PHE CE1 C Y N 369 PHE CE2 C Y N 370 PHE CZ C Y N 371 PHE OXT O N N 372 PHE H H N N 373 PHE H2 H N N 374 PHE HA H N N 375 PHE HB2 H N N 376 PHE HB3 H N N 377 PHE HD1 H N N 378 PHE HD2 H N N 379 PHE HE1 H N N 380 PHE HE2 H N N 381 PHE HZ H N N 382 PHE HXT H N N 383 PRO N N N N 384 PRO CA C N S 385 PRO C C N N 386 PRO O O N N 387 PRO CB C N N 388 PRO CG C N N 389 PRO CD C N N 390 PRO OXT O N N 391 PRO H H N N 392 PRO HA H N N 393 PRO HB2 H N N 394 PRO HB3 H N N 395 PRO HG2 H N N 396 PRO HG3 H N N 397 PRO HD2 H N N 398 PRO HD3 H N N 399 PRO HXT H N N 400 SER N N N N 401 SER CA C N S 402 SER C C N N 403 SER O O N N 404 SER CB C N N 405 SER OG O N N 406 SER OXT O N N 407 SER H H N N 408 SER H2 H N N 409 SER HA H N N 410 SER HB2 H N N 411 SER HB3 H N N 412 SER HG H N N 413 SER HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TYR N N N N 432 TYR CA C N S 433 TYR C C N N 434 TYR O O N N 435 TYR CB C N N 436 TYR CG C Y N 437 TYR CD1 C Y N 438 TYR CD2 C Y N 439 TYR CE1 C Y N 440 TYR CE2 C Y N 441 TYR CZ C Y N 442 TYR OH O N N 443 TYR OXT O N N 444 TYR H H N N 445 TYR H2 H N N 446 TYR HA H N N 447 TYR HB2 H N N 448 TYR HB3 H N N 449 TYR HD1 H N N 450 TYR HD2 H N N 451 TYR HE1 H N N 452 TYR HE2 H N N 453 TYR HH H N N 454 TYR HXT H N N 455 VAL N N N N 456 VAL CA C N S 457 VAL C C N N 458 VAL O O N N 459 VAL CB C N N 460 VAL CG1 C N N 461 VAL CG2 C N N 462 VAL OXT O N N 463 VAL H H N N 464 VAL H2 H N N 465 VAL HA H N N 466 VAL HB H N N 467 VAL HG11 H N N 468 VAL HG12 H N N 469 VAL HG13 H N N 470 VAL HG21 H N N 471 VAL HG22 H N N 472 VAL HG23 H N N 473 VAL HXT H N N 474 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1EJE C4 N3 doub Y N 1 A1EJE C4 N5 sing Y N 2 A1EJE N3 C2 sing Y N 3 A1EJE N5 C6 doub Y N 4 A1EJE C2 N1 sing N N 5 A1EJE C2 C7 doub Y N 6 A1EJE C6 C7 sing Y N 7 A1EJE C6 N10 sing Y N 8 A1EJE O12 C13 sing N N 9 A1EJE O12 C11 sing N N 10 A1EJE C7 N8 sing Y N 11 A1EJE C13 C14 sing N N 12 A1EJE C13 C36 sing N N 13 A1EJE C11 N10 sing N N 14 A1EJE C11 C38 sing N N 15 A1EJE O37 C36 sing N N 16 A1EJE N10 C9 sing Y N 17 A1EJE C14 O15 sing N N 18 A1EJE O15 P16 sing N N 19 A1EJE C36 C38 sing N N 20 A1EJE C38 O39 sing N N 21 A1EJE N8 C9 doub Y N 22 A1EJE O17 P16 doub N N 23 A1EJE P16 O18 sing N N 24 A1EJE P16 O19 sing N N 25 A1EJE O21 P20 doub N N 26 A1EJE O19 P20 sing N N 27 A1EJE P20 O23 sing N N 28 A1EJE P20 O22 sing N N 29 A1EJE O23 C24 sing N N 30 A1EJE O26 C27 sing N N 31 A1EJE O26 C25 sing N N 32 A1EJE C24 C25 sing N N 33 A1EJE C27 O28 sing N N 34 A1EJE C27 C33 sing N N 35 A1EJE O28 P29 sing N N 36 A1EJE C25 C34 sing N N 37 A1EJE C33 C34 sing N N 38 A1EJE C33 O32 sing N N 39 A1EJE O30 P29 doub N N 40 A1EJE C34 O35 sing N N 41 A1EJE P29 O32 sing N N 42 A1EJE P29 O31 sing N N 43 A1EJE N1 H1 sing N N 44 A1EJE N1 H2 sing N N 45 A1EJE C4 H3 sing N N 46 A1EJE C13 H4 sing N N 47 A1EJE C24 H5 sing N N 48 A1EJE C24 H6 sing N N 49 A1EJE C11 H7 sing N N 50 A1EJE C14 H8 sing N N 51 A1EJE C14 H9 sing N N 52 A1EJE C25 H10 sing N N 53 A1EJE C27 H11 sing N N 54 A1EJE C33 H12 sing N N 55 A1EJE C34 H13 sing N N 56 A1EJE C36 H14 sing N N 57 A1EJE C38 H15 sing N N 58 A1EJE C9 H16 sing N N 59 A1EJE O18 H17 sing N N 60 A1EJE O22 H18 sing N N 61 A1EJE O31 H19 sing N N 62 A1EJE O35 H20 sing N N 63 A1EJE O37 H21 sing N N 64 A1EJE O39 H22 sing N N 65 ALA N CA sing N N 66 ALA N H sing N N 67 ALA N H2 sing N N 68 ALA CA C sing N N 69 ALA CA CB sing N N 70 ALA CA HA sing N N 71 ALA C O doub N N 72 ALA C OXT sing N N 73 ALA CB HB1 sing N N 74 ALA CB HB2 sing N N 75 ALA CB HB3 sing N N 76 ALA OXT HXT sing N N 77 ARG N CA sing N N 78 ARG N H sing N N 79 ARG N H2 sing N N 80 ARG CA C sing N N 81 ARG CA CB sing N N 82 ARG CA HA sing N N 83 ARG C O doub N N 84 ARG C OXT sing N N 85 ARG CB CG sing N N 86 ARG CB HB2 sing N N 87 ARG CB HB3 sing N N 88 ARG CG CD sing N N 89 ARG CG HG2 sing N N 90 ARG CG HG3 sing N N 91 ARG CD NE sing N N 92 ARG CD HD2 sing N N 93 ARG CD HD3 sing N N 94 ARG NE CZ sing N N 95 ARG NE HE sing N N 96 ARG CZ NH1 sing N N 97 ARG CZ NH2 doub N N 98 ARG NH1 HH11 sing N N 99 ARG NH1 HH12 sing N N 100 ARG NH2 HH21 sing N N 101 ARG NH2 HH22 sing N N 102 ARG OXT HXT sing N N 103 ASN N CA sing N N 104 ASN N H sing N N 105 ASN N H2 sing N N 106 ASN CA C sing N N 107 ASN CA CB sing N N 108 ASN CA HA sing N N 109 ASN C O doub N N 110 ASN C OXT sing N N 111 ASN CB CG sing N N 112 ASN CB HB2 sing N N 113 ASN CB HB3 sing N N 114 ASN CG OD1 doub N N 115 ASN CG ND2 sing N N 116 ASN ND2 HD21 sing N N 117 ASN ND2 HD22 sing N N 118 ASN OXT HXT sing N N 119 ASP N CA sing N N 120 ASP N H sing N N 121 ASP N H2 sing N N 122 ASP CA C sing N N 123 ASP CA CB sing N N 124 ASP CA HA sing N N 125 ASP C O doub N N 126 ASP C OXT sing N N 127 ASP CB CG sing N N 128 ASP CB HB2 sing N N 129 ASP CB HB3 sing N N 130 ASP CG OD1 doub N N 131 ASP CG OD2 sing N N 132 ASP OD2 HD2 sing N N 133 ASP OXT HXT sing N N 134 CYS N CA sing N N 135 CYS N H sing N N 136 CYS N H2 sing N N 137 CYS CA C sing N N 138 CYS CA CB sing N N 139 CYS CA HA sing N N 140 CYS C O doub N N 141 CYS C OXT sing N N 142 CYS CB SG sing N N 143 CYS CB HB2 sing N N 144 CYS CB HB3 sing N N 145 CYS SG HG sing N N 146 CYS OXT HXT sing N N 147 DA OP3 P sing N N 148 DA OP3 HOP3 sing N N 149 DA P OP1 doub N N 150 DA P OP2 sing N N 151 DA P "O5'" sing N N 152 DA OP2 HOP2 sing N N 153 DA "O5'" "C5'" sing N N 154 DA "C5'" "C4'" sing N N 155 DA "C5'" "H5'" sing N N 156 DA "C5'" "H5''" sing N N 157 DA "C4'" "O4'" sing N N 158 DA "C4'" "C3'" sing N N 159 DA "C4'" "H4'" sing N N 160 DA "O4'" "C1'" sing N N 161 DA "C3'" "O3'" sing N N 162 DA "C3'" "C2'" sing N N 163 DA "C3'" "H3'" sing N N 164 DA "O3'" "HO3'" sing N N 165 DA "C2'" "C1'" sing N N 166 DA "C2'" "H2'" sing N N 167 DA "C2'" "H2''" sing N N 168 DA "C1'" N9 sing N N 169 DA "C1'" "H1'" sing N N 170 DA N9 C8 sing Y N 171 DA N9 C4 sing Y N 172 DA C8 N7 doub Y N 173 DA C8 H8 sing N N 174 DA N7 C5 sing Y N 175 DA C5 C6 sing Y N 176 DA C5 C4 doub Y N 177 DA C6 N6 sing N N 178 DA C6 N1 doub Y N 179 DA N6 H61 sing N N 180 DA N6 H62 sing N N 181 DA N1 C2 sing Y N 182 DA C2 N3 doub Y N 183 DA C2 H2 sing N N 184 DA N3 C4 sing Y N 185 GLN N CA sing N N 186 GLN N H sing N N 187 GLN N H2 sing N N 188 GLN CA C sing N N 189 GLN CA CB sing N N 190 GLN CA HA sing N N 191 GLN C O doub N N 192 GLN C OXT sing N N 193 GLN CB CG sing N N 194 GLN CB HB2 sing N N 195 GLN CB HB3 sing N N 196 GLN CG CD sing N N 197 GLN CG HG2 sing N N 198 GLN CG HG3 sing N N 199 GLN CD OE1 doub N N 200 GLN CD NE2 sing N N 201 GLN NE2 HE21 sing N N 202 GLN NE2 HE22 sing N N 203 GLN OXT HXT sing N N 204 GLU N CA sing N N 205 GLU N H sing N N 206 GLU N H2 sing N N 207 GLU CA C sing N N 208 GLU CA CB sing N N 209 GLU CA HA sing N N 210 GLU C O doub N N 211 GLU C OXT sing N N 212 GLU CB CG sing N N 213 GLU CB HB2 sing N N 214 GLU CB HB3 sing N N 215 GLU CG CD sing N N 216 GLU CG HG2 sing N N 217 GLU CG HG3 sing N N 218 GLU CD OE1 doub N N 219 GLU CD OE2 sing N N 220 GLU OE2 HE2 sing N N 221 GLU OXT HXT sing N N 222 GLY N CA sing N N 223 GLY N H sing N N 224 GLY N H2 sing N N 225 GLY CA C sing N N 226 GLY CA HA2 sing N N 227 GLY CA HA3 sing N N 228 GLY C O doub N N 229 GLY C OXT sing N N 230 GLY OXT HXT sing N N 231 GOL C1 O1 sing N N 232 GOL C1 C2 sing N N 233 GOL C1 H11 sing N N 234 GOL C1 H12 sing N N 235 GOL O1 HO1 sing N N 236 GOL C2 O2 sing N N 237 GOL C2 C3 sing N N 238 GOL C2 H2 sing N N 239 GOL O2 HO2 sing N N 240 GOL C3 O3 sing N N 241 GOL C3 H31 sing N N 242 GOL C3 H32 sing N N 243 GOL O3 HO3 sing N N 244 HIS N CA sing N N 245 HIS N H sing N N 246 HIS N H2 sing N N 247 HIS CA C sing N N 248 HIS CA CB sing N N 249 HIS CA HA sing N N 250 HIS C O doub N N 251 HIS C OXT sing N N 252 HIS CB CG sing N N 253 HIS CB HB2 sing N N 254 HIS CB HB3 sing N N 255 HIS CG ND1 sing Y N 256 HIS CG CD2 doub Y N 257 HIS ND1 CE1 doub Y N 258 HIS ND1 HD1 sing N N 259 HIS CD2 NE2 sing Y N 260 HIS CD2 HD2 sing N N 261 HIS CE1 NE2 sing Y N 262 HIS CE1 HE1 sing N N 263 HIS NE2 HE2 sing N N 264 HIS OXT HXT sing N N 265 HOH O H1 sing N N 266 HOH O H2 sing N N 267 ILE N CA sing N N 268 ILE N H sing N N 269 ILE N H2 sing N N 270 ILE CA C sing N N 271 ILE CA CB sing N N 272 ILE CA HA sing N N 273 ILE C O doub N N 274 ILE C OXT sing N N 275 ILE CB CG1 sing N N 276 ILE CB CG2 sing N N 277 ILE CB HB sing N N 278 ILE CG1 CD1 sing N N 279 ILE CG1 HG12 sing N N 280 ILE CG1 HG13 sing N N 281 ILE CG2 HG21 sing N N 282 ILE CG2 HG22 sing N N 283 ILE CG2 HG23 sing N N 284 ILE CD1 HD11 sing N N 285 ILE CD1 HD12 sing N N 286 ILE CD1 HD13 sing N N 287 ILE OXT HXT sing N N 288 LEU N CA sing N N 289 LEU N H sing N N 290 LEU N H2 sing N N 291 LEU CA C sing N N 292 LEU CA CB sing N N 293 LEU CA HA sing N N 294 LEU C O doub N N 295 LEU C OXT sing N N 296 LEU CB CG sing N N 297 LEU CB HB2 sing N N 298 LEU CB HB3 sing N N 299 LEU CG CD1 sing N N 300 LEU CG CD2 sing N N 301 LEU CG HG sing N N 302 LEU CD1 HD11 sing N N 303 LEU CD1 HD12 sing N N 304 LEU CD1 HD13 sing N N 305 LEU CD2 HD21 sing N N 306 LEU CD2 HD22 sing N N 307 LEU CD2 HD23 sing N N 308 LEU OXT HXT sing N N 309 LYS N CA sing N N 310 LYS N H sing N N 311 LYS N H2 sing N N 312 LYS CA C sing N N 313 LYS CA CB sing N N 314 LYS CA HA sing N N 315 LYS C O doub N N 316 LYS C OXT sing N N 317 LYS CB CG sing N N 318 LYS CB HB2 sing N N 319 LYS CB HB3 sing N N 320 LYS CG CD sing N N 321 LYS CG HG2 sing N N 322 LYS CG HG3 sing N N 323 LYS CD CE sing N N 324 LYS CD HD2 sing N N 325 LYS CD HD3 sing N N 326 LYS CE NZ sing N N 327 LYS CE HE2 sing N N 328 LYS CE HE3 sing N N 329 LYS NZ HZ1 sing N N 330 LYS NZ HZ2 sing N N 331 LYS NZ HZ3 sing N N 332 LYS OXT HXT sing N N 333 MET N CA sing N N 334 MET N H sing N N 335 MET N H2 sing N N 336 MET CA C sing N N 337 MET CA CB sing N N 338 MET CA HA sing N N 339 MET C O doub N N 340 MET C OXT sing N N 341 MET CB CG sing N N 342 MET CB HB2 sing N N 343 MET CB HB3 sing N N 344 MET CG SD sing N N 345 MET CG HG2 sing N N 346 MET CG HG3 sing N N 347 MET SD CE sing N N 348 MET CE HE1 sing N N 349 MET CE HE2 sing N N 350 MET CE HE3 sing N N 351 MET OXT HXT sing N N 352 PHE N CA sing N N 353 PHE N H sing N N 354 PHE N H2 sing N N 355 PHE CA C sing N N 356 PHE CA CB sing N N 357 PHE CA HA sing N N 358 PHE C O doub N N 359 PHE C OXT sing N N 360 PHE CB CG sing N N 361 PHE CB HB2 sing N N 362 PHE CB HB3 sing N N 363 PHE CG CD1 doub Y N 364 PHE CG CD2 sing Y N 365 PHE CD1 CE1 sing Y N 366 PHE CD1 HD1 sing N N 367 PHE CD2 CE2 doub Y N 368 PHE CD2 HD2 sing N N 369 PHE CE1 CZ doub Y N 370 PHE CE1 HE1 sing N N 371 PHE CE2 CZ sing Y N 372 PHE CE2 HE2 sing N N 373 PHE CZ HZ sing N N 374 PHE OXT HXT sing N N 375 PRO N CA sing N N 376 PRO N CD sing N N 377 PRO N H sing N N 378 PRO CA C sing N N 379 PRO CA CB sing N N 380 PRO CA HA sing N N 381 PRO C O doub N N 382 PRO C OXT sing N N 383 PRO CB CG sing N N 384 PRO CB HB2 sing N N 385 PRO CB HB3 sing N N 386 PRO CG CD sing N N 387 PRO CG HG2 sing N N 388 PRO CG HG3 sing N N 389 PRO CD HD2 sing N N 390 PRO CD HD3 sing N N 391 PRO OXT HXT sing N N 392 SER N CA sing N N 393 SER N H sing N N 394 SER N H2 sing N N 395 SER CA C sing N N 396 SER CA CB sing N N 397 SER CA HA sing N N 398 SER C O doub N N 399 SER C OXT sing N N 400 SER CB OG sing N N 401 SER CB HB2 sing N N 402 SER CB HB3 sing N N 403 SER OG HG sing N N 404 SER OXT HXT sing N N 405 THR N CA sing N N 406 THR N H sing N N 407 THR N H2 sing N N 408 THR CA C sing N N 409 THR CA CB sing N N 410 THR CA HA sing N N 411 THR C O doub N N 412 THR C OXT sing N N 413 THR CB OG1 sing N N 414 THR CB CG2 sing N N 415 THR CB HB sing N N 416 THR OG1 HG1 sing N N 417 THR CG2 HG21 sing N N 418 THR CG2 HG22 sing N N 419 THR CG2 HG23 sing N N 420 THR OXT HXT sing N N 421 TYR N CA sing N N 422 TYR N H sing N N 423 TYR N H2 sing N N 424 TYR CA C sing N N 425 TYR CA CB sing N N 426 TYR CA HA sing N N 427 TYR C O doub N N 428 TYR C OXT sing N N 429 TYR CB CG sing N N 430 TYR CB HB2 sing N N 431 TYR CB HB3 sing N N 432 TYR CG CD1 doub Y N 433 TYR CG CD2 sing Y N 434 TYR CD1 CE1 sing Y N 435 TYR CD1 HD1 sing N N 436 TYR CD2 CE2 doub Y N 437 TYR CD2 HD2 sing N N 438 TYR CE1 CZ doub Y N 439 TYR CE1 HE1 sing N N 440 TYR CE2 CZ sing Y N 441 TYR CE2 HE2 sing N N 442 TYR CZ OH sing N N 443 TYR OH HH sing N N 444 TYR OXT HXT sing N N 445 VAL N CA sing N N 446 VAL N H sing N N 447 VAL N H2 sing N N 448 VAL CA C sing N N 449 VAL CA CB sing N N 450 VAL CA HA sing N N 451 VAL C O doub N N 452 VAL C OXT sing N N 453 VAL CB CG1 sing N N 454 VAL CB CG2 sing N N 455 VAL CB HB sing N N 456 VAL CG1 HG11 sing N N 457 VAL CG1 HG12 sing N N 458 VAL CG1 HG13 sing N N 459 VAL CG2 HG21 sing N N 460 VAL CG2 HG22 sing N N 461 VAL CG2 HG23 sing N N 462 VAL OXT HXT sing N N 463 # _ndb_struct_conf_na.entry_id 9LDG _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DA 3 1_555 D DA 10 1_555 -3.893 1.965 -0.263 -17.757 1.339 -116.726 1 C_DA3:DA10_D C 3 ? D 10 ? 5 4 1 C DA 4 1_555 D DA 9 1_555 4.283 1.618 0.226 12.279 1.737 -103.920 2 C_DA4:DA9_D C 4 ? D 9 ? 5 4 1 C DA 5 1_555 D DA 8 1_555 -4.135 0.784 -0.742 -8.409 -17.821 -105.953 3 C_DA5:DA8_D C 5 ? D 8 ? 5 4 1 C DA 6 1_555 D DA 7 1_555 -4.097 4.823 0.012 -14.776 -15.848 -170.808 4 C_DA6:DA7_D C 6 ? D 7 ? 2 7 1 C DA 7 1_555 D DA 6 1_555 -4.526 5.191 -0.148 -9.204 -8.760 -175.034 5 C_DA7:DA6_D C 7 ? D 6 ? 2 8 1 C DA 8 1_555 D DA 5 1_555 3.748 1.154 -0.584 8.337 -18.191 -107.016 6 C_DA8:DA5_D C 8 ? D 5 ? 5 4 1 C DA 9 1_555 D DA 4 1_555 -4.225 1.371 0.330 -5.429 -0.731 -102.585 7 C_DA9:DA4_D C 9 ? D 4 ? 5 4 1 C DA 10 1_555 D DA 3 1_555 4.044 2.620 -0.376 15.574 0.314 -121.248 8 C_DA10:DA3_D C 10 ? D 3 ? 5 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DA 3 1_555 D DA 10 1_555 C DA 4 1_555 D DA 9 1_555 -0.055 -1.084 2.833 -2.715 -7.559 50.303 -0.791 -0.105 2.955 -8.828 3.170 50.899 1 CC_DA3DA4:DA9DA10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DA 4 1_555 D DA 9 1_555 C DA 5 1_555 D DA 8 1_555 0.414 4.256 3.593 0.849 -0.106 -2.004 -107.304 47.915 3.350 2.852 22.929 -2.179 2 CC_DA4DA5:DA8DA9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DA 5 1_555 D DA 8 1_555 C DA 6 1_555 D DA 7 1_555 2.866 -0.784 2.939 -0.331 1.729 76.710 -0.677 -2.317 2.913 1.393 0.267 76.727 3 CC_DA5DA6:DA7DA8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 C DA 6 1_555 D DA 7 1_555 C DA 7 1_555 D DA 6 1_555 1.111 2.219 3.484 -4.902 -4.340 32.302 4.651 -2.791 2.973 -7.702 8.700 32.942 4 CC_DA6DA7:DA6DA7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 C DA 7 1_555 D DA 6 1_555 C DA 8 1_555 D DA 5 1_555 -2.592 0.782 3.575 -3.605 -3.060 9.396 10.482 6.824 3.854 -17.314 20.395 10.517 5 CC_DA7DA8:DA5DA6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 C DA 8 1_555 D DA 5 1_555 C DA 9 1_555 D DA 4 1_555 -1.077 4.302 3.670 -3.625 0.608 -4.101 -48.211 -31.699 1.550 -6.927 -41.306 -5.507 6 CC_DA8DA9:DA4DA5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 C DA 9 1_555 D DA 4 1_555 C DA 10 1_555 D DA 3 1_555 -0.129 -1.440 2.859 5.024 -11.395 51.709 -0.941 0.439 3.067 -12.853 -5.666 53.087 7 CC_DA9DA10:DA3DA4_DD C 9 ? D 4 ? C 10 ? D 3 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9LDG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.016645 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001175 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016836 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015247 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ # loop_ #