HEADER APOPTOSIS 24-FEB-25 9M0G TITLE CRYSTAL STRUCTURE OF HUMAN ENDONUCLEASE G MUTANT C113A/H141A BOUND TITLE 2 WITH TRANS-RESVERATROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE G, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENDO G; COMPND 5 EC: 3.1.30.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ENDOG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HIS-ME FINGER ENDONUCLEASES, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR W.Z.YANG,H.S.YUAN REVDAT 1 10-JUN-26 9M0G 0 JRNL AUTH W.Z.YANG,H.S.YUAN JRNL TITL CRYSTAL STRUCTURE OF HUMAN ENDONUCLEASE G MUTANT C113A/H141A JRNL TITL 2 BOUND WITH TRANS-RESVERATROL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 6710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 5.4500 0.98 1312 146 0.2044 0.2906 REMARK 3 2 5.4400 - 4.3300 0.99 1254 140 0.1749 0.2635 REMARK 3 3 4.3300 - 3.7800 1.00 1251 138 0.1902 0.3273 REMARK 3 4 3.7800 - 3.4400 0.96 1202 133 0.2175 0.3117 REMARK 3 5 3.4400 - 3.2000 0.83 1020 114 0.2224 0.3601 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 NULL REMARK 3 ANGLE : 1.600 NULL REMARK 3 CHIRALITY : 0.067 529 REMARK 3 PLANARITY : 0.013 662 REMARK 3 DIHEDRAL : 8.539 513 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9M0G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1300056954. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7033 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.190 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.18100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6NJT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 17.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02 M CITRIC ACID, 0.08 M BIS-TRIS REMARK 280 PROPANE / PH 8.0, 16% W/V POLYETHYLENE GLYCOL 3,350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.15250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.04500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.28050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.04500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.15250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.28050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ALA A 3 REMARK 465 LEU A 4 REMARK 465 ARG A 5 REMARK 465 ALA A 6 REMARK 465 GLY A 7 REMARK 465 LEU A 8 REMARK 465 THR A 9 REMARK 465 LEU A 10 REMARK 465 ALA A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 15 REMARK 465 LEU A 16 REMARK 465 GLY A 17 REMARK 465 ALA A 18 REMARK 465 VAL A 19 REMARK 465 VAL A 20 REMARK 465 GLU A 21 REMARK 465 GLY A 22 REMARK 465 TRP A 23 REMARK 465 ARG A 24 REMARK 465 ARG A 25 REMARK 465 ARG A 26 REMARK 465 ARG A 27 REMARK 465 GLU A 28 REMARK 465 ASP A 29 REMARK 465 ALA A 30 REMARK 465 ARG A 31 REMARK 465 ALA A 32 REMARK 465 ALA A 33 REMARK 465 PRO A 34 REMARK 465 GLY A 35 REMARK 465 LEU A 36 REMARK 465 LEU A 37 REMARK 465 GLY A 38 REMARK 465 ARG A 39 REMARK 465 LEU A 40 REMARK 465 PRO A 41 REMARK 465 VAL A 42 REMARK 465 LEU A 43 REMARK 465 PRO A 44 REMARK 465 VAL A 45 REMARK 465 ALA A 46 REMARK 465 ALA A 47 REMARK 465 ALA A 48 REMARK 465 ALA A 49 REMARK 465 GLU A 50 REMARK 465 LEU A 51 REMARK 465 PRO A 52 REMARK 465 PRO A 53 REMARK 465 VAL A 54 REMARK 465 PRO A 55 REMARK 465 GLY A 56 REMARK 465 GLY A 57 REMARK 465 PRO A 58 REMARK 465 ARG A 59 REMARK 465 GLY A 60 REMARK 465 PRO A 61 REMARK 465 GLY A 62 REMARK 465 ALA A 286 REMARK 465 GLY A 287 REMARK 465 SER A 288 REMARK 465 LEU A 289 REMARK 465 LYS A 290 REMARK 465 ALA A 291 REMARK 465 ILE A 292 REMARK 465 THR A 293 REMARK 465 ALA A 294 REMARK 465 GLY A 295 REMARK 465 SER A 296 REMARK 465 LYS A 297 REMARK 465 LEU A 298 REMARK 465 GLU A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 ARG B 5 REMARK 465 ALA B 6 REMARK 465 GLY B 7 REMARK 465 LEU B 8 REMARK 465 THR B 9 REMARK 465 LEU B 10 REMARK 465 ALA B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 LEU B 16 REMARK 465 GLY B 17 REMARK 465 ALA B 18 REMARK 465 VAL B 19 REMARK 465 VAL B 20 REMARK 465 GLU B 21 REMARK 465 GLY B 22 REMARK 465 TRP B 23 REMARK 465 ARG B 24 REMARK 465 ARG B 25 REMARK 465 ARG B 26 REMARK 465 ARG B 27 REMARK 465 GLU B 28 REMARK 465 ASP B 29 REMARK 465 ALA B 30 REMARK 465 ARG B 31 REMARK 465 ALA B 32 REMARK 465 ALA B 33 REMARK 465 PRO B 34 REMARK 465 GLY B 35 REMARK 465 LEU B 36 REMARK 465 LEU B 37 REMARK 465 GLY B 38 REMARK 465 ARG B 39 REMARK 465 LEU B 40 REMARK 465 PRO B 41 REMARK 465 VAL B 42 REMARK 465 LEU B 43 REMARK 465 PRO B 44 REMARK 465 VAL B 45 REMARK 465 ALA B 46 REMARK 465 ALA B 47 REMARK 465 ALA B 48 REMARK 465 ALA B 49 REMARK 465 GLU B 50 REMARK 465 LEU B 51 REMARK 465 PRO B 52 REMARK 465 PRO B 53 REMARK 465 VAL B 54 REMARK 465 PRO B 55 REMARK 465 GLY B 56 REMARK 465 GLY B 57 REMARK 465 PRO B 58 REMARK 465 ARG B 59 REMARK 465 GLY B 60 REMARK 465 PRO B 61 REMARK 465 GLY B 62 REMARK 465 SER B 288 REMARK 465 LEU B 289 REMARK 465 LYS B 290 REMARK 465 ALA B 291 REMARK 465 ILE B 292 REMARK 465 THR B 293 REMARK 465 ALA B 294 REMARK 465 GLY B 295 REMARK 465 SER B 296 REMARK 465 LYS B 297 REMARK 465 LEU B 298 REMARK 465 GLU B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 HIS B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 102 HH21 ARG A 149 1.36 REMARK 500 HH TYR B 81 O ASP B 157 1.52 REMARK 500 O ILE A 282 H ARG A 285 1.55 REMARK 500 O TYR B 182 HG SER B 185 1.57 REMARK 500 O GLY A 106 H GLY A 108 1.60 REMARK 500 O ARG B 103 N ARG B 105 2.08 REMARK 500 SG CYS B 84 O15 RE2 B 402 2.11 REMARK 500 O ILE A 282 N ARG A 285 2.13 REMARK 500 OE1 GLU A 102 NH2 ARG A 149 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 H GLY A 134 O ARG B 105 1655 1.44 REMARK 500 O GLU A 63 N VAL A 265 3555 1.92 REMARK 500 N GLY A 134 O ARG B 105 1655 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 66 -66.72 -18.32 REMARK 500 GLU A 102 -139.76 40.94 REMARK 500 ARG A 103 100.20 56.52 REMARK 500 LEU A 104 54.60 106.69 REMARK 500 ASP A 107 -45.59 61.46 REMARK 500 ARG A 110 -133.94 -138.30 REMARK 500 HIS A 148 39.23 -150.37 REMARK 500 ASN A 174 -89.46 -120.07 REMARK 500 ALA A 284 21.15 -64.83 REMARK 500 LEU B 64 -67.89 -29.68 REMARK 500 ALA B 65 30.09 35.44 REMARK 500 GLU B 102 146.43 75.10 REMARK 500 ARG B 103 33.34 -140.55 REMARK 500 LEU B 104 -50.55 -4.61 REMARK 500 ARG B 105 -22.68 -162.83 REMARK 500 ARG B 110 -14.00 -147.19 REMARK 500 HIS B 148 53.02 -150.50 REMARK 500 ASN B 174 -86.32 -115.45 REMARK 500 ASP B 208 14.03 -68.30 REMARK 500 VAL B 279 63.90 30.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 63 LEU A 64 147.45 REMARK 500 LEU A 283 ALA A 284 149.88 REMARK 500 PRO B 101 GLU B 102 145.55 REMARK 500 REMARK 500 REMARK: NULL DBREF 9M0G A 1 297 UNP Q14249 NUCG_HUMAN 1 297 DBREF 9M0G B 1 297 UNP Q14249 NUCG_HUMAN 1 297 SEQADV 9M0G GLY A 0 UNP Q14249 EXPRESSION TAG SEQADV 9M0G ALA A 113 UNP Q14249 CYS 113 ENGINEERED MUTATION SEQADV 9M0G ALA A 141 UNP Q14249 HIS 141 ENGINEERED MUTATION SEQADV 9M0G LEU A 298 UNP Q14249 EXPRESSION TAG SEQADV 9M0G GLU A 299 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS A 300 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS A 301 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS A 302 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS A 303 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS A 304 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS A 305 UNP Q14249 EXPRESSION TAG SEQADV 9M0G GLY B 0 UNP Q14249 EXPRESSION TAG SEQADV 9M0G ALA B 113 UNP Q14249 CYS 113 ENGINEERED MUTATION SEQADV 9M0G ALA B 141 UNP Q14249 HIS 141 ENGINEERED MUTATION SEQADV 9M0G LEU B 298 UNP Q14249 EXPRESSION TAG SEQADV 9M0G GLU B 299 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS B 300 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS B 301 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS B 302 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS B 303 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS B 304 UNP Q14249 EXPRESSION TAG SEQADV 9M0G HIS B 305 UNP Q14249 EXPRESSION TAG SEQRES 1 A 306 GLY MET ARG ALA LEU ARG ALA GLY LEU THR LEU ALA SER SEQRES 2 A 306 GLY ALA GLY LEU GLY ALA VAL VAL GLU GLY TRP ARG ARG SEQRES 3 A 306 ARG ARG GLU ASP ALA ARG ALA ALA PRO GLY LEU LEU GLY SEQRES 4 A 306 ARG LEU PRO VAL LEU PRO VAL ALA ALA ALA ALA GLU LEU SEQRES 5 A 306 PRO PRO VAL PRO GLY GLY PRO ARG GLY PRO GLY GLU LEU SEQRES 6 A 306 ALA LYS TYR GLY LEU PRO GLY LEU ALA GLN LEU LYS SER SEQRES 7 A 306 ARG GLU SER TYR VAL LEU CYS TYR ASP PRO ARG THR ARG SEQRES 8 A 306 GLY ALA LEU TRP VAL VAL GLU GLN LEU ARG PRO GLU ARG SEQRES 9 A 306 LEU ARG GLY ASP GLY ASP ARG ARG GLU ALA ASP PHE ARG SEQRES 10 A 306 GLU ASP ASP SER VAL HIS ALA TYR HIS ARG ALA THR ASN SEQRES 11 A 306 ALA ASP TYR ARG GLY SER GLY PHE ASP ARG GLY ALA LEU SEQRES 12 A 306 ALA ALA ALA ALA ASN HIS ARG TRP SER GLN LYS ALA MET SEQRES 13 A 306 ASP ASP THR PHE TYR LEU SER ASN VAL ALA PRO GLN VAL SEQRES 14 A 306 PRO HIS LEU ASN GLN ASN ALA TRP ASN ASN LEU GLU LYS SEQRES 15 A 306 TYR SER ARG SER LEU THR ARG SER TYR GLN ASN VAL TYR SEQRES 16 A 306 VAL CYS THR GLY PRO LEU PHE LEU PRO ARG THR GLU ALA SEQRES 17 A 306 ASP GLY LYS SER TYR VAL LYS TYR GLN VAL ILE GLY LYS SEQRES 18 A 306 ASN HIS VAL ALA VAL PRO THR HIS PHE PHE LYS VAL LEU SEQRES 19 A 306 ILE LEU GLU ALA ALA GLY GLY GLN ILE GLU LEU ARG THR SEQRES 20 A 306 TYR VAL MET PRO ASN ALA PRO VAL ASP GLU ALA ILE PRO SEQRES 21 A 306 LEU GLU ARG PHE LEU VAL PRO ILE GLU SER ILE GLU ARG SEQRES 22 A 306 ALA SER GLY LEU LEU PHE VAL PRO ASN ILE LEU ALA ARG SEQRES 23 A 306 ALA GLY SER LEU LYS ALA ILE THR ALA GLY SER LYS LEU SEQRES 24 A 306 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 306 GLY MET ARG ALA LEU ARG ALA GLY LEU THR LEU ALA SER SEQRES 2 B 306 GLY ALA GLY LEU GLY ALA VAL VAL GLU GLY TRP ARG ARG SEQRES 3 B 306 ARG ARG GLU ASP ALA ARG ALA ALA PRO GLY LEU LEU GLY SEQRES 4 B 306 ARG LEU PRO VAL LEU PRO VAL ALA ALA ALA ALA GLU LEU SEQRES 5 B 306 PRO PRO VAL PRO GLY GLY PRO ARG GLY PRO GLY GLU LEU SEQRES 6 B 306 ALA LYS TYR GLY LEU PRO GLY LEU ALA GLN LEU LYS SER SEQRES 7 B 306 ARG GLU SER TYR VAL LEU CYS TYR ASP PRO ARG THR ARG SEQRES 8 B 306 GLY ALA LEU TRP VAL VAL GLU GLN LEU ARG PRO GLU ARG SEQRES 9 B 306 LEU ARG GLY ASP GLY ASP ARG ARG GLU ALA ASP PHE ARG SEQRES 10 B 306 GLU ASP ASP SER VAL HIS ALA TYR HIS ARG ALA THR ASN SEQRES 11 B 306 ALA ASP TYR ARG GLY SER GLY PHE ASP ARG GLY ALA LEU SEQRES 12 B 306 ALA ALA ALA ALA ASN HIS ARG TRP SER GLN LYS ALA MET SEQRES 13 B 306 ASP ASP THR PHE TYR LEU SER ASN VAL ALA PRO GLN VAL SEQRES 14 B 306 PRO HIS LEU ASN GLN ASN ALA TRP ASN ASN LEU GLU LYS SEQRES 15 B 306 TYR SER ARG SER LEU THR ARG SER TYR GLN ASN VAL TYR SEQRES 16 B 306 VAL CYS THR GLY PRO LEU PHE LEU PRO ARG THR GLU ALA SEQRES 17 B 306 ASP GLY LYS SER TYR VAL LYS TYR GLN VAL ILE GLY LYS SEQRES 18 B 306 ASN HIS VAL ALA VAL PRO THR HIS PHE PHE LYS VAL LEU SEQRES 19 B 306 ILE LEU GLU ALA ALA GLY GLY GLN ILE GLU LEU ARG THR SEQRES 20 B 306 TYR VAL MET PRO ASN ALA PRO VAL ASP GLU ALA ILE PRO SEQRES 21 B 306 LEU GLU ARG PHE LEU VAL PRO ILE GLU SER ILE GLU ARG SEQRES 22 B 306 ALA SER GLY LEU LEU PHE VAL PRO ASN ILE LEU ALA ARG SEQRES 23 B 306 ALA GLY SER LEU LYS ALA ILE THR ALA GLY SER LYS LEU SEQRES 24 B 306 GLU HIS HIS HIS HIS HIS HIS HET MG A 401 1 HET MG B 401 1 HET RE2 B 402 29 HETNAM MG MAGNESIUM ION HETNAM RE2 5-[2-(4-HYDROXYPHENYL)ETHYL]BENZENE-1,3-DIOL HETSYN RE2 DIHYDRORESVERATROL FORMUL 3 MG 2(MG 2+) FORMUL 5 RE2 C14 H14 O3 HELIX 1 AA1 HIS A 122 ARG A 126 5 5 HELIX 2 AA2 THR A 128 ARG A 133 1 6 HELIX 3 AA3 ALA A 144 ARG A 149 5 6 HELIX 4 AA4 SER A 151 THR A 158 1 8 HELIX 5 AA5 PHE A 159 SER A 162 5 4 HELIX 6 AA6 VAL A 168 ASN A 174 1 7 HELIX 7 AA7 ASN A 174 LEU A 186 1 13 HELIX 8 AA8 THR A 187 SER A 189 5 3 HELIX 9 AA9 PRO A 259 LEU A 264 5 6 HELIX 10 AB1 PRO A 266 GLY A 275 1 10 HELIX 11 AB2 PHE A 278 LEU A 283 1 6 HELIX 12 AB3 HIS B 122 ARG B 126 5 5 HELIX 13 AB4 THR B 128 ARG B 133 5 6 HELIX 14 AB5 ALA B 144 HIS B 148 5 5 HELIX 15 AB6 SER B 151 ASP B 157 1 7 HELIX 16 AB7 THR B 158 SER B 162 5 5 HELIX 17 AB8 VAL B 168 ASN B 174 1 7 HELIX 18 AB9 ASN B 174 SER B 185 1 12 HELIX 19 AC1 ALA B 238 GLY B 240 5 3 HELIX 20 AC2 PRO B 259 ARG B 262 5 4 HELIX 21 AC3 PRO B 266 GLY B 275 1 10 SHEET 1 AA1 6 LEU A 75 SER A 77 0 SHEET 2 AA1 6 VAL A 82 ASP A 86 -1 O LEU A 83 N LYS A 76 SHEET 3 AA1 6 GLY A 91 LEU A 99 -1 O GLY A 91 N ASP A 86 SHEET 4 AA1 6 ASN A 192 LEU A 200 -1 O VAL A 195 N GLU A 97 SHEET 5 AA1 6 HIS A 228 ALA A 237 -1 O VAL A 232 N CYS A 196 SHEET 6 AA1 6 GLN A 241 PRO A 250 -1 O ARG A 245 N LEU A 233 SHEET 1 AA2 2 ASP A 138 ALA A 141 0 SHEET 2 AA2 2 VAL A 164 GLN A 167 -1 O ALA A 165 N GLY A 140 SHEET 1 AA3 4 PRO A 203 THR A 205 0 SHEET 2 AA3 4 SER A 211 ILE A 218 -1 O TYR A 212 N ARG A 204 SHEET 3 AA3 4 SER B 211 ILE B 218 -1 O VAL B 213 N TYR A 215 SHEET 4 AA3 4 PRO B 203 THR B 205 -1 N ARG B 204 O TYR B 212 SHEET 1 AA4 4 VAL A 223 ALA A 224 0 SHEET 2 AA4 4 SER A 211 ILE A 218 -1 N ILE A 218 O VAL A 223 SHEET 3 AA4 4 SER B 211 ILE B 218 -1 O VAL B 213 N TYR A 215 SHEET 4 AA4 4 VAL B 223 VAL B 225 -1 O VAL B 225 N GLN B 216 SHEET 1 AA5 7 LEU B 75 SER B 77 0 SHEET 2 AA5 7 TYR B 81 ASP B 86 -1 O LEU B 83 N LYS B 76 SHEET 3 AA5 7 GLY B 91 LEU B 99 -1 O GLY B 91 N ASP B 86 SHEET 4 AA5 7 ASN B 192 LEU B 200 -1 O VAL B 195 N GLU B 97 SHEET 5 AA5 7 HIS B 228 GLU B 236 -1 O VAL B 232 N CYS B 196 SHEET 6 AA5 7 ILE B 242 PRO B 250 -1 O ARG B 245 N LEU B 233 SHEET 7 AA5 7 LEU B 264 VAL B 265 -1 O VAL B 265 N THR B 246 SHEET 1 AA6 2 ASP B 138 ALA B 141 0 SHEET 2 AA6 2 VAL B 164 GLN B 167 -1 O GLN B 167 N ASP B 138 LINK OD1 ASN A 172 MG MG A 401 1555 1555 2.70 LINK OD1 ASN B 172 MG MG B 401 1555 1555 1.97 CRYST1 64.305 70.561 88.090 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015551 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014172 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011352 0.00000 CONECT 1713 7094 CONECT 5251 7095 CONECT 7094 1713 CONECT 7095 5251 CONECT 7096 7097 7103 7105 CONECT 7097 7096 7098 7113 CONECT 7098 7097 7101 7104 CONECT 7099 7100 7106 7114 CONECT 7100 7099 7102 7115 CONECT 7101 7098 7102 7116 CONECT 7102 7100 7101 7103 CONECT 7103 7096 7102 7117 CONECT 7104 7098 7118 CONECT 7105 7096 7119 CONECT 7106 7099 7107 7112 CONECT 7107 7106 7108 7120 CONECT 7108 7107 7109 7121 CONECT 7109 7108 7110 7111 CONECT 7110 7109 7122 CONECT 7111 7109 7112 7123 CONECT 7112 7106 7111 7124 CONECT 7113 7097 CONECT 7114 7099 CONECT 7115 7100 CONECT 7116 7101 CONECT 7117 7103 CONECT 7118 7104 CONECT 7119 7105 CONECT 7120 7107 CONECT 7121 7108 CONECT 7122 7110 CONECT 7123 7111 CONECT 7124 7112 MASTER 458 0 3 21 25 0 0 6 3598 2 33 48 END