HEADER PLANT PROTEIN 04-MAR-25 9M4N TITLE STRUCTURE OF ATCDC48 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 48 HOMOLOG A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATCDC48A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: CDC48A, CDC48, AT3G09840, F8A24.11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AAA ATPASE, HEXAMER, ATP-DEPENDENT CHAPERONE, PROTEIN UNFOLLDING, KEYWDS 2 PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.S.SANDHOLU,J.ZHANG,Z.H.BRANDON,U.F.S.HAMEED,S.T.AROLD REVDAT 3 28-JAN-26 9M4N 1 JRNL REVDAT 2 21-JAN-26 9M4N 1 JRNL REVDAT 1 29-OCT-25 9M4N 0 JRNL AUTH B.HUNTINGTON,A.SANDHOLU,J.WANG,J.ZHANG,L.ZHAO,B.M.QURESHI, JRNL AUTH 2 U.F.SHAHUL HAMEED,S.T.AROLD JRNL TITL CRYO-EM STRUCTURAL ANALYSES REVEAL PLANT-SPECIFIC JRNL TITL 2 ADAPTATIONS OF THE CDC48 UNFOLDASE. JRNL REF PLANT COMMUN. V. 7 01572 2026 JRNL REFN ISSN 2590-3462 JRNL PMID 41137397 JRNL DOI 10.1016/J.XPLC.2025.101572 REMARK 2 REMARK 2 RESOLUTION. 3.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.348 REMARK 3 R VALUE (WORKING SET) : 0.346 REMARK 3 FREE R VALUE : 0.384 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 701 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.9000 - 4.6800 1.00 2620 140 0.3609 0.4138 REMARK 3 2 4.6800 - 4.0900 1.00 2564 148 0.3567 0.3893 REMARK 3 3 4.0900 - 3.7200 1.00 2572 125 0.4138 0.4533 REMARK 3 4 3.7200 - 3.4500 1.00 2547 136 0.4642 0.4760 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.850 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 51.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 85.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : 0.006 925 REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9M4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-25. REMARK 100 THE DEPOSITION ID IS D_1300057154. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980118 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13805 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.450 REMARK 200 RESOLUTION RANGE LOW (A) : 47.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 31.80 REMARK 200 R MERGE (I) : 0.62000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 32.50 REMARK 200 R MERGE FOR SHELL (I) : 3.77000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 20MM MAGNESIUM CHLORIDE REMARK 280 HEXAHYDRATE, 22% POLY ACRYLIC ACID 5100, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 41860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 185570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 499 REMARK 465 VAL A 500 REMARK 465 GLU A 501 REMARK 465 HIS A 502 REMARK 465 PRO A 503 REMARK 465 GLU A 504 REMARK 465 LYS A 505 REMARK 465 PHE A 506 REMARK 465 GLU A 507 REMARK 465 LYS A 508 REMARK 465 PHE A 509 REMARK 465 GLY A 510 REMARK 465 MET A 511 REMARK 465 GLU A 557 REMARK 465 ARG A 589 REMARK 465 GLY A 590 REMARK 465 GLY A 591 REMARK 465 GLY A 592 REMARK 465 SER A 593 REMARK 465 GLY A 594 REMARK 465 GLY A 595 REMARK 465 ASP A 596 REMARK 465 GLY A 597 REMARK 465 GLY A 598 REMARK 465 PRO A 650 REMARK 465 LEU A 651 REMARK 465 PRO A 652 REMARK 465 ASP A 653 REMARK 465 GLU A 654 REMARK 465 ASP A 655 REMARK 465 SER A 656 REMARK 465 ASP A 673 REMARK 465 VAL A 674 REMARK 465 ASP A 675 REMARK 465 TYR A 682 REMARK 465 THR A 683 REMARK 465 GLN A 684 REMARK 465 GLY A 685 REMARK 465 PHE A 686 REMARK 465 SER A 687 REMARK 465 GLU A 708 REMARK 465 LYS A 709 REMARK 465 ASP A 710 REMARK 465 ILE A 711 REMARK 465 GLU A 712 REMARK 465 LYS A 713 REMARK 465 GLU A 714 REMARK 465 LYS A 715 REMARK 465 ARG A 716 REMARK 465 ARG A 717 REMARK 465 SER A 718 REMARK 465 GLU A 719 REMARK 465 ASN A 720 REMARK 465 PRO A 721 REMARK 465 GLU A 722 REMARK 465 ALA A 723 REMARK 465 MET A 724 REMARK 465 GLU A 725 REMARK 465 GLU A 726 REMARK 465 ASP A 727 REMARK 465 GLY A 728 REMARK 465 VAL A 729 REMARK 465 ASP A 730 REMARK 465 GLU A 731 REMARK 465 ARG A 749 REMARK 465 SER A 750 REMARK 465 VAL A 751 REMARK 465 SER A 752 REMARK 465 ASP A 753 REMARK 465 ALA A 754 REMARK 465 ASP A 755 REMARK 465 ILE A 756 REMARK 465 ARG A 757 REMARK 465 LYS A 758 REMARK 465 TYR A 759 REMARK 465 GLN A 760 REMARK 465 ALA A 761 REMARK 465 PHE A 762 REMARK 465 ALA A 763 REMARK 465 GLN A 764 REMARK 465 THR A 765 REMARK 465 LEU A 766 REMARK 465 GLN A 767 REMARK 465 GLN A 768 REMARK 465 SER A 769 REMARK 465 ARG A 770 REMARK 465 GLY A 771 REMARK 465 PHE A 772 REMARK 465 GLY A 773 REMARK 465 SER A 774 REMARK 465 GLU A 775 REMARK 465 PHE A 776 REMARK 465 ARG A 777 REMARK 465 PHE A 778 REMARK 465 GLU A 779 REMARK 465 ASN A 780 REMARK 465 SER A 781 REMARK 465 ALA A 782 REMARK 465 GLY A 783 REMARK 465 SER A 784 REMARK 465 GLY A 785 REMARK 465 ALA A 786 REMARK 465 THR A 787 REMARK 465 THR A 788 REMARK 465 GLY A 789 REMARK 465 VAL A 790 REMARK 465 ALA A 791 REMARK 465 ASP A 792 REMARK 465 PRO A 793 REMARK 465 PHE A 794 REMARK 465 ALA A 795 REMARK 465 THR A 796 REMARK 465 SER A 797 REMARK 465 ALA A 798 REMARK 465 ALA A 799 REMARK 465 ALA A 800 REMARK 465 ALA A 801 REMARK 465 GLY A 802 REMARK 465 ASP A 803 REMARK 465 ASP A 804 REMARK 465 ASP A 805 REMARK 465 ASP A 806 REMARK 465 LEU A 807 REMARK 465 TYR A 808 REMARK 465 ASN A 809 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 116 -73.84 -91.15 REMARK 500 GLU A 145 12.58 59.42 REMARK 500 ALA A 175 -131.98 58.69 REMARK 500 TYR A 177 71.96 -118.29 REMARK 500 PRO A 230 38.25 -87.85 REMARK 500 GLN A 231 -61.35 -101.96 REMARK 500 PHE A 233 0.24 -64.90 REMARK 500 LYS A 242 -30.61 -134.25 REMARK 500 LYS A 254 -54.45 -131.00 REMARK 500 PRO A 314 57.26 -94.57 REMARK 500 LYS A 315 -143.64 54.89 REMARK 500 ASN A 320 -166.63 -168.52 REMARK 500 PRO A 353 31.39 -81.09 REMARK 500 ARG A 362 -108.22 -151.51 REMARK 500 ARG A 362 -108.27 -151.48 REMARK 500 THR A 388 59.79 -95.45 REMARK 500 LEU A 393 -169.16 -100.37 REMARK 500 MET A 430 -77.69 -95.50 REMARK 500 ASP A 431 -111.96 53.37 REMARK 500 SER A 439 67.68 -114.37 REMARK 500 ALA A 442 -148.86 -157.25 REMARK 500 SER A 447 12.92 57.24 REMARK 500 SER A 465 -54.12 -137.48 REMARK 500 ASN A 476 62.11 -118.52 REMARK 500 ILE A 482 -59.80 -120.33 REMARK 500 GLU A 491 45.43 -89.20 REMARK 500 ALA A 600 31.30 -88.97 REMARK 500 ARG A 603 -158.60 -76.62 REMARK 500 VAL A 604 -34.71 51.86 REMARK 500 LYS A 619 -50.07 67.46 REMARK 500 THR A 620 36.47 -90.56 REMARK 500 ASP A 631 -52.13 -138.60 REMARK 500 SER A 635 8.23 -68.72 REMARK 500 GLN A 645 148.55 -173.56 REMARK 500 LEU A 658 -154.98 66.97 REMARK 500 TYR A 701 30.58 -75.06 REMARK 500 ARG A 704 40.71 -101.38 REMARK 500 GLU A 734 -80.67 -126.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9M3V RELATED DB: PDB DBREF 9M4N A 28 809 UNP P54609 CD48A_ARATH 28 809 SEQADV 9M4N GLY A 26 UNP P54609 EXPRESSION TAG SEQADV 9M4N SER A 27 UNP P54609 EXPRESSION TAG SEQRES 1 A 784 GLY SER ASN ARG LEU VAL VAL ASP GLU ALA ILE ASN ASP SEQRES 2 A 784 ASP ASN SER VAL VAL SER LEU HIS PRO ALA THR MET GLU SEQRES 3 A 784 LYS LEU GLN LEU PHE ARG GLY ASP THR ILE LEU ILE LYS SEQRES 4 A 784 GLY LYS LYS ARG LYS ASP THR VAL CYS ILE ALA LEU ALA SEQRES 5 A 784 ASP GLU THR CYS GLU GLU PRO LYS ILE ARG MET ASN LYS SEQRES 6 A 784 VAL VAL ARG SER ASN LEU ARG VAL ARG LEU GLY ASP VAL SEQRES 7 A 784 ILE SER VAL HIS GLN CYS PRO ASP VAL LYS TYR GLY LYS SEQRES 8 A 784 ARG VAL HIS ILE LEU PRO VAL ASP ASP THR VAL GLU GLY SEQRES 9 A 784 VAL THR GLY ASN LEU PHE ASP ALA TYR LEU LYS PRO TYR SEQRES 10 A 784 PHE LEU GLU ALA TYR ARG PRO VAL ARG LYS GLY ASP LEU SEQRES 11 A 784 PHE LEU VAL ARG GLY GLY MET ARG SER VAL GLU PHE LYS SEQRES 12 A 784 VAL ILE GLU THR ASP PRO ALA GLU TYR CYS VAL VAL ALA SEQRES 13 A 784 PRO ASP THR GLU ILE PHE CYS GLU GLY GLU PRO VAL LYS SEQRES 14 A 784 ARG GLU ASP GLU GLU ARG LEU ASP ASP VAL GLY TYR ASP SEQRES 15 A 784 ASP VAL GLY GLY VAL ARG LYS GLN MET ALA GLN ILE ARG SEQRES 16 A 784 GLU LEU VAL GLU LEU PRO LEU ARG HIS PRO GLN LEU PHE SEQRES 17 A 784 LYS SER ILE GLY VAL LYS PRO PRO LYS GLY ILE LEU LEU SEQRES 18 A 784 TYR GLY PRO PRO GLY SER GLY LYS THR LEU ILE ALA ARG SEQRES 19 A 784 ALA VAL ALA ASN GLU THR GLY ALA PHE PHE PHE CYS ILE SEQRES 20 A 784 ASN GLY PRO GLU ILE MET SER LYS LEU ALA GLY GLU SER SEQRES 21 A 784 GLU SER ASN LEU ARG LYS ALA PHE GLU GLU ALA GLU LYS SEQRES 22 A 784 ASN ALA PRO SER ILE ILE PHE ILE ASP GLU ILE ASP SER SEQRES 23 A 784 ILE ALA PRO LYS ARG GLU LYS THR ASN GLY GLU VAL GLU SEQRES 24 A 784 ARG ARG ILE VAL SER GLN LEU LEU THR LEU MET ASP GLY SEQRES 25 A 784 LEU LYS SER ARG ALA HIS VAL ILE VAL MET GLY ALA THR SEQRES 26 A 784 ASN ARG PRO ASN SER ILE ASP PRO ALA LEU ARG ARG PHE SEQRES 27 A 784 GLY ARG PHE ASP ARG GLU ILE ASP ILE GLY VAL PRO ASP SEQRES 28 A 784 GLU ILE GLY ARG LEU GLU VAL LEU ARG ILE HIS THR LYS SEQRES 29 A 784 ASN MET LYS LEU ALA GLU ASP VAL ASP LEU GLU ARG ILE SEQRES 30 A 784 SER LYS ASP THR HIS GLY TYR VAL GLY ALA ASP LEU ALA SEQRES 31 A 784 ALA LEU CYS THR GLU ALA ALA LEU GLN CYS ILE ARG GLU SEQRES 32 A 784 LYS MET ASP VAL ILE ASP LEU GLU ASP ASP SER ILE ASP SEQRES 33 A 784 ALA GLU ILE LEU ASN SER MET ALA VAL THR ASN GLU HIS SEQRES 34 A 784 PHE HIS THR ALA LEU GLY ASN SER ASN PRO SER ALA LEU SEQRES 35 A 784 ARG GLU THR VAL VAL GLU VAL PRO ASN VAL SER TRP ASN SEQRES 36 A 784 ASP ILE GLY GLY LEU GLU ASN VAL LYS ARG GLU LEU GLN SEQRES 37 A 784 GLU THR VAL GLN TYR PRO VAL GLU HIS PRO GLU LYS PHE SEQRES 38 A 784 GLU LYS PHE GLY MET SER PRO SER LYS GLY VAL LEU PHE SEQRES 39 A 784 TYR GLY PRO PRO GLY CYS GLY LYS THR LEU LEU ALA LYS SEQRES 40 A 784 ALA ILE ALA ASN GLU CYS GLN ALA ASN PHE ILE SER VAL SEQRES 41 A 784 LYS GLY PRO GLU LEU LEU THR MET TRP PHE GLY GLU SER SEQRES 42 A 784 GLU ALA ASN VAL ARG GLU ILE PHE ASP LYS ALA ARG GLN SEQRES 43 A 784 SER ALA PRO CYS VAL LEU PHE PHE ASP GLU LEU ASP SER SEQRES 44 A 784 ILE ALA THR GLN ARG GLY GLY GLY SER GLY GLY ASP GLY SEQRES 45 A 784 GLY GLY ALA ALA ASP ARG VAL LEU ASN GLN LEU LEU THR SEQRES 46 A 784 GLU MET ASP GLY MET ASN ALA LYS LYS THR VAL PHE ILE SEQRES 47 A 784 ILE GLY ALA THR ASN ARG PRO ASP ILE ILE ASP SER ALA SEQRES 48 A 784 LEU LEU ARG PRO GLY ARG LEU ASP GLN LEU ILE TYR ILE SEQRES 49 A 784 PRO LEU PRO ASP GLU ASP SER ARG LEU ASN ILE PHE LYS SEQRES 50 A 784 ALA ALA LEU ARG LYS SER PRO ILE ALA LYS ASP VAL ASP SEQRES 51 A 784 ILE GLY ALA LEU ALA LYS TYR THR GLN GLY PHE SER GLY SEQRES 52 A 784 ALA ASP ILE THR GLU ILE CYS GLN ARG ALA CYS LYS TYR SEQRES 53 A 784 ALA ILE ARG GLU ASN ILE GLU LYS ASP ILE GLU LYS GLU SEQRES 54 A 784 LYS ARG ARG SER GLU ASN PRO GLU ALA MET GLU GLU ASP SEQRES 55 A 784 GLY VAL ASP GLU VAL SER GLU ILE LYS ALA ALA HIS PHE SEQRES 56 A 784 GLU GLU SER MET LYS TYR ALA ARG ARG SER VAL SER ASP SEQRES 57 A 784 ALA ASP ILE ARG LYS TYR GLN ALA PHE ALA GLN THR LEU SEQRES 58 A 784 GLN GLN SER ARG GLY PHE GLY SER GLU PHE ARG PHE GLU SEQRES 59 A 784 ASN SER ALA GLY SER GLY ALA THR THR GLY VAL ALA ASP SEQRES 60 A 784 PRO PHE ALA THR SER ALA ALA ALA ALA GLY ASP ASP ASP SEQRES 61 A 784 ASP LEU TYR ASN HET ADP A 901 27 HET ADP A 902 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 HOH *9(H2 O) HELIX 1 AA1 HIS A 46 LEU A 53 1 8 HELIX 2 AA2 ASN A 89 LEU A 96 1 8 HELIX 3 AA3 ASN A 133 TYR A 138 1 6 HELIX 4 AA4 TYR A 138 LEU A 144 1 7 HELIX 5 AA5 GLY A 205 VAL A 209 5 5 HELIX 6 AA6 VAL A 212 VAL A 223 1 12 HELIX 7 AA7 VAL A 223 HIS A 229 1 7 HELIX 8 AA8 GLN A 231 SER A 235 5 5 HELIX 9 AA9 LYS A 254 GLY A 266 1 13 HELIX 10 AB1 GLY A 274 MET A 278 1 5 HELIX 11 AB2 GLY A 283 ASN A 299 1 17 HELIX 12 AB3 GLU A 308 ALA A 313 1 6 HELIX 13 AB4 VAL A 323 VAL A 328 1 6 HELIX 14 AB5 VAL A 328 GLY A 337 1 10 HELIX 15 AB6 ASP A 376 THR A 388 1 13 HELIX 16 AB7 ASP A 398 ASP A 405 1 8 HELIX 17 AB8 VAL A 410 GLU A 428 1 19 HELIX 18 AB9 THR A 451 ASN A 461 1 11 HELIX 19 AC1 LEU A 529 GLN A 539 1 11 HELIX 20 AC2 LYS A 546 LEU A 551 1 6 HELIX 21 AC3 ALA A 560 SER A 572 1 13 HELIX 22 AC4 GLU A 581 ALA A 586 5 6 HELIX 23 AC5 VAL A 604 ASP A 613 1 10 HELIX 24 AC6 GLY A 614 LYS A 619 1 6 HELIX 25 AC7 GLY A 677 LYS A 681 5 5 HELIX 26 AC8 ASP A 690 TYR A 701 1 12 SHEET 1 AA1 6 VAL A 42 LEU A 45 0 SHEET 2 AA1 6 ASP A 70 ALA A 77 1 O ILE A 74 N VAL A 43 SHEET 3 AA1 6 THR A 60 LYS A 64 -1 N ILE A 61 O CYS A 73 SHEET 4 AA1 6 VAL A 103 GLN A 108 -1 O HIS A 107 N LEU A 62 SHEET 5 AA1 6 ARG A 29 ASP A 33 -1 N LEU A 30 O ILE A 104 SHEET 6 AA1 6 LYS A 85 ARG A 87 1 O ILE A 86 N VAL A 31 SHEET 1 AA2 3 ILE A 120 PRO A 122 0 SHEET 2 AA2 3 ARG A 163 VAL A 169 -1 O LYS A 168 N LEU A 121 SHEET 3 AA2 3 ASP A 154 GLY A 160 -1 N PHE A 156 O PHE A 167 SHEET 1 AA3 5 PHE A 268 ASN A 273 0 SHEET 2 AA3 5 SER A 302 ASP A 307 1 O PHE A 305 N PHE A 270 SHEET 3 AA3 5 VAL A 344 THR A 350 1 O MET A 347 N ILE A 304 SHEET 4 AA3 5 GLY A 243 TYR A 247 1 N ILE A 244 O VAL A 346 SHEET 5 AA3 5 ARG A 368 ASP A 371 1 O ILE A 370 N LEU A 245 SHEET 1 AA4 2 LYS A 392 LEU A 393 0 SHEET 2 AA4 2 ALA A 449 VAL A 450 1 O VAL A 450 N LYS A 392 SHEET 1 AA5 5 ASN A 541 VAL A 545 0 SHEET 2 AA5 5 CYS A 575 PHE A 579 1 O VAL A 576 N ASN A 541 SHEET 3 AA5 5 VAL A 621 ALA A 626 1 O ILE A 624 N LEU A 577 SHEET 4 AA5 5 GLY A 516 TYR A 520 1 N PHE A 519 O GLY A 625 SHEET 5 AA5 5 LEU A 646 TYR A 648 1 O ILE A 647 N LEU A 518 CISPEP 1 ALA A 573 PRO A 574 0 -5.40 CRYST1 144.467 144.467 162.963 90.00 90.00 120.00 P 6 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006922 0.003996 0.000000 0.00000 SCALE2 0.000000 0.007993 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006136 0.00000 CONECT 5142 5143 5144 5145 5149 CONECT 5143 5142 CONECT 5144 5142 CONECT 5145 5142 CONECT 5146 5147 5148 5149 5150 CONECT 5147 5146 CONECT 5148 5146 CONECT 5149 5142 5146 CONECT 5150 5146 5151 CONECT 5151 5150 5152 CONECT 5152 5151 5153 5154 CONECT 5153 5152 5158 CONECT 5154 5152 5155 5156 CONECT 5155 5154 CONECT 5156 5154 5157 5158 CONECT 5157 5156 CONECT 5158 5153 5156 5159 CONECT 5159 5158 5160 5168 CONECT 5160 5159 5161 CONECT 5161 5160 5162 CONECT 5162 5161 5163 5168 CONECT 5163 5162 5164 5165 CONECT 5164 5163 CONECT 5165 5163 5166 CONECT 5166 5165 5167 CONECT 5167 5166 5168 CONECT 5168 5159 5162 5167 CONECT 5169 5170 5171 5172 5176 CONECT 5170 5169 CONECT 5171 5169 CONECT 5172 5169 CONECT 5173 5174 5175 5176 5177 CONECT 5174 5173 CONECT 5175 5173 CONECT 5176 5169 5173 CONECT 5177 5173 5178 CONECT 5178 5177 5179 CONECT 5179 5178 5180 5181 CONECT 5180 5179 5185 CONECT 5181 5179 5182 5183 CONECT 5182 5181 CONECT 5183 5181 5184 5185 CONECT 5184 5183 CONECT 5185 5180 5183 5186 CONECT 5186 5185 5187 5195 CONECT 5187 5186 5188 CONECT 5188 5187 5189 CONECT 5189 5188 5190 5195 CONECT 5190 5189 5191 5192 CONECT 5191 5190 CONECT 5192 5190 5193 CONECT 5193 5192 5194 CONECT 5194 5193 5195 CONECT 5195 5186 5189 5194 MASTER 433 0 2 26 21 0 0 6 5195 1 54 61 END