HEADER TOXIN,HYDROLASE 19-DEC-24 9MLE TITLE CRYSTAL STRUCTURE OF ASP49 PHOSPHOLIPASE A2 ISOLATED FROM LACHESIS TITLE 2 MUTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE A2; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACHESIS MUTA; SOURCE 3 ORGANISM_TAXID: 8752 KEYWDS PHOSPHOLIPASE A2, LACHESIS MUTA, TOXIN, VENOM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.A.LEONARDO,J.A.VARGAS,H.M.PEREIRA,R.C.GARRATT REVDAT 1 13-MAY-26 9MLE 0 JRNL AUTH N.E.NEYRA CHAMA,F.F.ROMERO VARGAS,E.CONDORI MAMANI, JRNL AUTH 2 J.A.VARGAS,A.ALVES FURTADO,H.D'MUNIZ PEREIRA, JRNL AUTH 3 R.D.NAVARRO OVIEDO,R.C.GARRATT,J.L.J.VEGA RAMIREZ, JRNL AUTH 4 D.A.LEONARDO JRNL TITL CRYSTAL STRUCTURE AND FUNCTIONAL CHARACTERIZATION OF AN JRNL TITL 2 ASP49 PHOSPHOLIPASE A 2 FROM THE BUSHMASTER (LACHESIS MUTA). JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 82 150 2026 JRNL REFN ESSN 2053-230X JRNL PMID 41944125 JRNL DOI 10.1107/S2053230X26002736 REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2-4158-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 14682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1700 - 4.0400 1.00 2981 147 0.2107 0.2426 REMARK 3 2 4.0300 - 3.2000 1.00 2817 128 0.2403 0.2491 REMARK 3 3 3.2000 - 2.8000 1.00 2752 140 0.2895 0.3138 REMARK 3 4 2.8000 - 2.5400 1.00 2708 153 0.2868 0.2978 REMARK 3 5 2.5400 - 2.3600 1.00 2716 140 0.3214 0.3261 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1866 REMARK 3 ANGLE : 0.599 2527 REMARK 3 CHIRALITY : 0.044 246 REMARK 3 PLANARITY : 0.005 339 REMARK 3 DIHEDRAL : 12.469 668 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8461 46.3801 -7.9115 REMARK 3 T TENSOR REMARK 3 T11: 0.3382 T22: 0.5716 REMARK 3 T33: 0.3782 T12: -0.0313 REMARK 3 T13: 0.0491 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 6.7677 L22: 7.8237 REMARK 3 L33: 7.1404 L12: -6.0806 REMARK 3 L13: 6.4789 L23: -4.9526 REMARK 3 S TENSOR REMARK 3 S11: -0.6757 S12: -0.0626 S13: 0.7086 REMARK 3 S21: 0.7766 S22: 0.0436 S23: -0.3829 REMARK 3 S31: -0.4855 S32: -0.1801 S33: 0.5706 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8147 50.5270 -11.8326 REMARK 3 T TENSOR REMARK 3 T11: 0.3978 T22: 0.6586 REMARK 3 T33: 0.4663 T12: -0.0271 REMARK 3 T13: -0.0024 T23: 0.0908 REMARK 3 L TENSOR REMARK 3 L11: 5.2329 L22: 2.0858 REMARK 3 L33: 0.8470 L12: 2.8101 REMARK 3 L13: -1.1303 L23: -0.0133 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: 0.6351 S13: 0.3508 REMARK 3 S21: 0.2802 S22: 0.2564 S23: 0.6007 REMARK 3 S31: -0.5872 S32: -0.6494 S33: -0.1573 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5829 38.5744 -10.1738 REMARK 3 T TENSOR REMARK 3 T11: 0.3662 T22: 0.5785 REMARK 3 T33: 0.3588 T12: -0.0221 REMARK 3 T13: 0.0894 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 5.3849 L22: 5.7436 REMARK 3 L33: 6.8238 L12: -0.5376 REMARK 3 L13: -2.1771 L23: 3.4880 REMARK 3 S TENSOR REMARK 3 S11: -0.8071 S12: 0.2160 S13: -0.6656 REMARK 3 S21: 0.4578 S22: 0.3229 S23: 0.4253 REMARK 3 S31: 1.1943 S32: -0.8421 S33: 0.6787 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8564 32.4198 -16.3086 REMARK 3 T TENSOR REMARK 3 T11: 0.7271 T22: 1.1328 REMARK 3 T33: 0.6007 T12: -0.2516 REMARK 3 T13: 0.0923 T23: -0.2886 REMARK 3 L TENSOR REMARK 3 L11: 7.9327 L22: 4.3508 REMARK 3 L33: 3.3307 L12: -0.3835 REMARK 3 L13: -1.6866 L23: -3.5025 REMARK 3 S TENSOR REMARK 3 S11: -0.1670 S12: 1.6285 S13: -1.9088 REMARK 3 S21: 0.1435 S22: -0.6333 S23: 0.3477 REMARK 3 S31: 0.6683 S32: -1.1002 S33: 0.6559 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1074 34.4559 -9.2494 REMARK 3 T TENSOR REMARK 3 T11: 0.4036 T22: 0.4880 REMARK 3 T33: 0.4584 T12: -0.0665 REMARK 3 T13: 0.0672 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 5.3349 L22: 2.2484 REMARK 3 L33: 4.1523 L12: 0.1056 REMARK 3 L13: -1.0693 L23: 0.1819 REMARK 3 S TENSOR REMARK 3 S11: -0.0334 S12: 0.3858 S13: -0.7377 REMARK 3 S21: 0.0696 S22: -0.0685 S23: 0.1852 REMARK 3 S31: 0.5479 S32: -0.1323 S33: 0.1402 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8772 45.0936 -11.9588 REMARK 3 T TENSOR REMARK 3 T11: 0.5630 T22: 0.5750 REMARK 3 T33: 0.5161 T12: -0.0127 REMARK 3 T13: -0.0529 T23: 0.1112 REMARK 3 L TENSOR REMARK 3 L11: 5.4672 L22: 3.7487 REMARK 3 L33: 8.0556 L12: -0.0433 REMARK 3 L13: 1.0537 L23: -5.4141 REMARK 3 S TENSOR REMARK 3 S11: 0.2842 S12: 0.9298 S13: 0.0103 REMARK 3 S21: -0.7203 S22: -1.3158 S23: -0.9105 REMARK 3 S31: -0.1108 S32: 0.9807 S33: 1.1510 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8573 39.5546 -13.9843 REMARK 3 T TENSOR REMARK 3 T11: 0.3778 T22: 0.6825 REMARK 3 T33: 0.3554 T12: -0.0524 REMARK 3 T13: 0.0669 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 8.4771 L22: 4.5540 REMARK 3 L33: 6.7595 L12: -4.8497 REMARK 3 L13: 5.1665 L23: -4.5960 REMARK 3 S TENSOR REMARK 3 S11: 0.2466 S12: 0.8461 S13: 0.3068 REMARK 3 S21: -0.7474 S22: -0.4092 S23: -0.2721 REMARK 3 S31: 1.0328 S32: -0.0399 S33: 0.2117 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5275 44.7133 -16.5662 REMARK 3 T TENSOR REMARK 3 T11: 0.3292 T22: 0.8874 REMARK 3 T33: 0.4285 T12: 0.0372 REMARK 3 T13: -0.0123 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 7.1835 L22: 5.8623 REMARK 3 L33: 6.4086 L12: 0.6580 REMARK 3 L13: -2.9128 L23: 0.6473 REMARK 3 S TENSOR REMARK 3 S11: 0.1402 S12: 1.0040 S13: 0.2156 REMARK 3 S21: -0.5538 S22: -0.7597 S23: 0.1977 REMARK 3 S31: -0.2154 S32: -0.7603 S33: 0.4892 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4850 28.4350 -13.6996 REMARK 3 T TENSOR REMARK 3 T11: 0.7572 T22: 0.9614 REMARK 3 T33: 1.0772 T12: -0.1207 REMARK 3 T13: 0.0039 T23: -0.1956 REMARK 3 L TENSOR REMARK 3 L11: 7.0406 L22: 7.4957 REMARK 3 L33: 3.7439 L12: -1.8258 REMARK 3 L13: -5.1089 L23: 1.8513 REMARK 3 S TENSOR REMARK 3 S11: -0.8474 S12: -0.1034 S13: -0.9579 REMARK 3 S21: -0.3801 S22: 0.3447 S23: -0.4676 REMARK 3 S31: 1.4105 S32: -0.3252 S33: 0.3812 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4575 64.3882 2.5649 REMARK 3 T TENSOR REMARK 3 T11: 0.9132 T22: 1.3434 REMARK 3 T33: 1.3293 T12: -0.5667 REMARK 3 T13: -0.6531 T23: 0.2779 REMARK 3 L TENSOR REMARK 3 L11: 5.5900 L22: 5.2023 REMARK 3 L33: 4.0725 L12: -0.7393 REMARK 3 L13: 1.0438 L23: -2.4311 REMARK 3 S TENSOR REMARK 3 S11: -0.6586 S12: 1.2198 S13: 0.4560 REMARK 3 S21: 0.3091 S22: -0.4521 S23: -1.6524 REMARK 3 S31: -0.6403 S32: 1.2260 S33: 0.5617 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0309 54.3794 -4.4234 REMARK 3 T TENSOR REMARK 3 T11: 0.3071 T22: 0.6926 REMARK 3 T33: 0.5765 T12: -0.1442 REMARK 3 T13: -0.1021 T23: 0.1609 REMARK 3 L TENSOR REMARK 3 L11: 8.4047 L22: 8.9270 REMARK 3 L33: 6.3276 L12: -1.2095 REMARK 3 L13: -3.8542 L23: 1.3065 REMARK 3 S TENSOR REMARK 3 S11: -0.3378 S12: 0.7127 S13: 0.6282 REMARK 3 S21: 0.1367 S22: 0.1765 S23: -0.5342 REMARK 3 S31: -0.6020 S32: 0.8843 S33: 0.0555 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2269 62.6971 -9.1036 REMARK 3 T TENSOR REMARK 3 T11: 0.8345 T22: 0.9736 REMARK 3 T33: 0.7649 T12: -0.3370 REMARK 3 T13: -0.2685 T23: 0.4253 REMARK 3 L TENSOR REMARK 3 L11: 3.6352 L22: 1.8480 REMARK 3 L33: 2.2393 L12: -0.0270 REMARK 3 L13: -2.8013 L23: 0.3932 REMARK 3 S TENSOR REMARK 3 S11: -0.5425 S12: 1.3454 S13: 0.8427 REMARK 3 S21: 0.0012 S22: -0.2579 S23: -0.6215 REMARK 3 S31: -1.9509 S32: 0.7845 S33: 0.6830 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4610 72.3894 -5.8192 REMARK 3 T TENSOR REMARK 3 T11: 1.3079 T22: 1.5458 REMARK 3 T33: 1.7137 T12: -0.9523 REMARK 3 T13: -0.2556 T23: 0.3914 REMARK 3 L TENSOR REMARK 3 L11: 2.0163 L22: 0.7425 REMARK 3 L33: 2.8834 L12: 0.4619 REMARK 3 L13: -2.3244 L23: -0.9018 REMARK 3 S TENSOR REMARK 3 S11: 0.1783 S12: 0.6437 S13: 1.0173 REMARK 3 S21: -0.2395 S22: 0.5122 S23: -0.7573 REMARK 3 S31: -1.0359 S32: 0.6297 S33: -0.0347 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 82 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3981 62.7034 -0.2202 REMARK 3 T TENSOR REMARK 3 T11: 0.8228 T22: 0.5910 REMARK 3 T33: 0.7396 T12: -0.2031 REMARK 3 T13: -0.3769 T23: 0.1470 REMARK 3 L TENSOR REMARK 3 L11: 4.7260 L22: 5.4439 REMARK 3 L33: 4.8351 L12: 0.3202 REMARK 3 L13: -2.3480 L23: -0.2839 REMARK 3 S TENSOR REMARK 3 S11: -0.4745 S12: 0.5088 S13: 1.1566 REMARK 3 S21: 0.4294 S22: 0.2065 S23: 0.0746 REMARK 3 S31: -1.5416 S32: 0.2997 S33: 0.1296 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3010 50.4158 -12.2242 REMARK 3 T TENSOR REMARK 3 T11: 0.3925 T22: 1.1789 REMARK 3 T33: 0.5459 T12: -0.0161 REMARK 3 T13: -0.0985 T23: 0.0504 REMARK 3 L TENSOR REMARK 3 L11: 3.5512 L22: 3.8320 REMARK 3 L33: 8.7429 L12: 0.3424 REMARK 3 L13: -0.6569 L23: 2.3325 REMARK 3 S TENSOR REMARK 3 S11: -0.3104 S12: 1.3577 S13: 0.4640 REMARK 3 S21: -0.6773 S22: -0.4224 S23: 0.1985 REMARK 3 S31: -1.3465 S32: -0.9719 S33: 0.8325 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MLE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-24. REMARK 100 THE DEPOSITION ID IS D_1000291121. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS SIRIUS REMARK 200 BEAMLINE : MANACA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97718 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14731 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 49.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 37.10 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 41.00 REMARK 200 R MERGE FOR SHELL (I) : 0.87500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE TRIHYDRATE, 0.1 M REMARK 280 MES PH 6.0 AND 20 % W/V PEG 8000, VAPOR DIFFUSION, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.34933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.17467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 80.34933 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.17467 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.34933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.17467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 80.34933 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.17467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 69 REMARK 465 ASN B 70 REMARK 465 GLY B 71 REMARK 465 ALA B 72 REMARK 465 ILE B 73 REMARK 465 VAL B 74 REMARK 465 CYS B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 ASP B 78 REMARK 465 ASN B 79 REMARK 465 PRO B 80 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 LEU B 2 CG CD1 CD2 REMARK 470 GLN B 4 CG CD OE1 NE2 REMARK 470 ASP B 7 CG OD1 OD2 REMARK 470 LEU B 8 CG CD1 CD2 REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 ARG B 14 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 18 CG1 CG2 CD1 REMARK 470 LYS B 53 CG CD CE NZ REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 ASN B 61 CG OD1 ND2 REMARK 470 ASP B 62 CG OD1 OD2 REMARK 470 ILE B 63 CG1 CG2 CD1 REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 GLU B 87 CG CD OE1 OE2 REMARK 470 ASP B 91 CG OD1 OD2 REMARK 470 LYS B 113 CG CD CE NZ REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 GLU B 118 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 31 NH2 ARG B 112 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 23 58.66 -142.20 REMARK 500 PHE B 23 58.36 -142.78 REMARK 500 ASP B 62 148.14 -171.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 27 O REMARK 620 2 GLY A 29 O 87.1 REMARK 620 3 GLY A 31 O 91.3 88.2 REMARK 620 4 ASP A 48 OD1 129.1 129.0 120.0 REMARK 620 5 ASP A 48 OD2 102.2 170.6 92.9 43.2 REMARK 620 6 MES A 201 O1 87.0 88.2 176.1 63.6 91.0 REMARK 620 N 1 2 3 4 5 DBREF 9MLE A 1 122 PDB 9MLE 9MLE 1 122 DBREF 9MLE B 1 122 PDB 9MLE 9MLE 1 122 SEQRES 1 A 122 HIS LEU LEU GLN PHE GLY ASP LEU ILE ASN LYS ILE ALA SEQRES 2 A 122 ARG ARG ASN GLY ILE LEU TYR TYR GLY PHE TYR GLY CYS SEQRES 3 A 122 TYR CYS GLY LEU GLY GLY ARG GLY ARG PRO GLN ASP ALA SEQRES 4 A 122 THR ASP ARG CYS CYS PHE VAL HIS ASP CYS CYS TYR GLY SEQRES 5 A 122 LYS VAL THR GLY CYS ASP PRO LYS ASN ASP ILE TYR THR SEQRES 6 A 122 TYR SER GLU GLU ASN GLY ALA ILE VAL CYS GLY GLY ASP SEQRES 7 A 122 ASN PRO CYS LYS LYS GLU ILE CYS GLU CYS ASP ARG ASP SEQRES 8 A 122 ALA ALA ILE CYS PHE ARG ASP ASN LEU ASP THR TYR ASP SEQRES 9 A 122 ASN LYS TYR TRP PHE PHE PRO ARG LYS TYR CYS LYS GLU SEQRES 10 A 122 GLU SER GLU PRO CYS SEQRES 1 B 122 HIS LEU LEU GLN PHE GLY ASP LEU ILE ASN LYS ILE ALA SEQRES 2 B 122 ARG ARG ASN GLY ILE LEU TYR TYR GLY PHE TYR GLY CYS SEQRES 3 B 122 TYR CYS GLY LEU GLY GLY ARG GLY ARG PRO GLN ASP ALA SEQRES 4 B 122 THR ASP ARG CYS CYS PHE VAL HIS ASP CYS CYS TYR GLY SEQRES 5 B 122 LYS VAL THR GLY CYS ASP PRO LYS ASN ASP ILE TYR THR SEQRES 6 B 122 TYR SER GLU GLU ASN GLY ALA ILE VAL CYS GLY GLY ASP SEQRES 7 B 122 ASN PRO CYS LYS LYS GLU ILE CYS GLU CYS ASP ARG ASP SEQRES 8 B 122 ALA ALA ILE CYS PHE ARG ASP ASN LEU ASP THR TYR ASP SEQRES 9 B 122 ASN LYS TYR TRP PHE PHE PRO ARG LYS TYR CYS LYS GLU SEQRES 10 B 122 GLU SER GLU PRO CYS HET MES A 201 12 HET CA A 202 1 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM CA CALCIUM ION FORMUL 3 MES C6 H13 N O4 S FORMUL 4 CA CA 2+ FORMUL 5 HOH *51(H2 O) HELIX 1 AA1 HIS A 1 ARG A 14 1 14 HELIX 2 AA2 ASN A 16 GLY A 22 1 7 HELIX 3 AA3 ASP A 38 VAL A 54 1 17 HELIX 4 AA4 ASN A 79 ASN A 99 1 21 HELIX 5 AA5 LEU A 100 TYR A 103 5 4 HELIX 6 AA6 ASP A 104 TRP A 108 5 5 HELIX 7 AA7 PRO A 111 LYS A 116 5 6 HELIX 8 AA8 LEU B 2 ALA B 13 1 12 HELIX 9 AA9 ASN B 16 GLY B 22 1 7 HELIX 10 AB1 ASP B 38 VAL B 54 1 17 HELIX 11 AB2 LYS B 82 ASN B 99 1 18 HELIX 12 AB3 LEU B 100 TYR B 103 5 4 HELIX 13 AB4 ASP B 104 TRP B 108 5 5 HELIX 14 AB5 PRO B 111 LYS B 116 5 6 SHEET 1 AA1 2 TYR A 66 GLU A 69 0 SHEET 2 AA1 2 ALA A 72 CYS A 75 -1 O VAL A 74 N SER A 67 SSBOND 1 CYS A 26 CYS A 115 1555 1555 2.03 SSBOND 2 CYS A 28 CYS A 44 1555 1555 2.03 SSBOND 3 CYS A 43 CYS A 95 1555 1555 2.03 SSBOND 4 CYS A 49 CYS A 122 1555 1555 2.03 SSBOND 5 CYS A 50 CYS A 88 1555 1555 2.03 SSBOND 6 CYS A 57 CYS A 81 1555 1555 2.04 SSBOND 7 CYS A 75 CYS A 86 1555 1555 2.04 SSBOND 8 CYS B 26 CYS B 115 1555 1555 2.03 SSBOND 9 CYS B 28 CYS B 44 1555 1555 2.04 SSBOND 10 CYS B 43 CYS B 95 1555 1555 2.03 SSBOND 11 CYS B 49 CYS B 122 1555 1555 2.03 SSBOND 12 CYS B 50 CYS B 88 1555 1555 2.02 SSBOND 13 CYS B 57 CYS B 81 1555 1555 2.04 LINK O TYR A 27 CA CA A 202 1555 1555 2.54 LINK O GLY A 29 CA CA A 202 1555 1555 2.68 LINK O GLY A 31 CA CA A 202 1555 1555 2.57 LINK OD1 ASP A 48 CA CA A 202 1555 1555 3.14 LINK OD2 ASP A 48 CA CA A 202 1555 1555 2.73 LINK O1 MES A 201 CA CA A 202 1555 1555 3.14 CRYST1 98.187 98.187 120.524 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010185 0.005880 0.000000 0.00000 SCALE2 0.000000 0.011760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008297 0.00000 CONECT 223 927 CONECT 227 1821 CONECT 241 354 CONECT 245 1821 CONECT 257 1821 CONECT 348 740 CONECT 354 241 CONECT 389 1821 CONECT 390 1821 CONECT 396 982 CONECT 402 689 CONECT 451 633 CONECT 596 674 CONECT 633 451 CONECT 674 596 CONECT 689 402 CONECT 740 348 CONECT 927 223 CONECT 982 396 CONECT 1173 1759 CONECT 1191 1304 CONECT 1298 1572 CONECT 1304 1191 CONECT 1346 1806 CONECT 1352 1524 CONECT 1397 1480 CONECT 1480 1397 CONECT 1524 1352 CONECT 1572 1298 CONECT 1759 1173 CONECT 1806 1346 CONECT 1809 1810 1814 1821 CONECT 1810 1809 1811 CONECT 1811 1810 1812 CONECT 1812 1811 1813 1815 CONECT 1813 1812 1814 CONECT 1814 1809 1813 CONECT 1815 1812 1816 CONECT 1816 1815 1817 CONECT 1817 1816 1818 1819 1820 CONECT 1818 1817 CONECT 1819 1817 CONECT 1820 1817 CONECT 1821 227 245 257 389 CONECT 1821 390 1809 MASTER 548 0 2 14 2 0 0 6 1858 2 45 20 END