data_9MOQ # _entry.id 9MOQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.400 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9MOQ pdb_00009moq 10.2210/pdb9moq/pdb WWPDB D_1000291454 ? ? EMDB EMD-48478 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9MOQ _pdbx_database_status.recvd_initial_deposition_date 2024-12-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM of F-pilus' _pdbx_database_related.db_id EMD-48478 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email egelman@virginia.edu _pdbx_contact_author.name_first Edward _pdbx_contact_author.name_last Egelman _pdbx_contact_author.name_mi H _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4844-5212 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sonani, R.R.' 1 ? 'Francetic, O.' 2 ? 'Lejeune, M.' 3 ? 'Izadi-Pruneyre, N.' 4 ? 'Egelman, E.H.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryo-EM of F-pilus' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Sonani, R.R.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Pilin 12780.441 1 ? ? ? ? 2 non-polymer syn 1-MYRISTOYL-2-MYRISTOLEOYL-SN-GLYCERO-3-PHOSPHATE 589.761 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name F-pilin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNAVLSVQGASAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMFFPQLAMAAGSSGQDLMASGNTTVKATFGKDSSVVKW VVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGL ; _entity_poly.pdbx_seq_one_letter_code_can ;MNAVLSVQGASAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMFFPQLAMAAGSSGQDLMASGNTTVKATFGKDSSVVKW VVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 1-MYRISTOYL-2-MYRISTOLEOYL-SN-GLYCERO-3-PHOSPHATE _pdbx_entity_nonpoly.comp_id X41 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 ALA n 1 4 VAL n 1 5 LEU n 1 6 SER n 1 7 VAL n 1 8 GLN n 1 9 GLY n 1 10 ALA n 1 11 SER n 1 12 ALA n 1 13 PRO n 1 14 VAL n 1 15 LYS n 1 16 LYS n 1 17 LYS n 1 18 SER n 1 19 PHE n 1 20 PHE n 1 21 SER n 1 22 LYS n 1 23 PHE n 1 24 THR n 1 25 ARG n 1 26 LEU n 1 27 ASN n 1 28 MET n 1 29 LEU n 1 30 ARG n 1 31 LEU n 1 32 ALA n 1 33 ARG n 1 34 ALA n 1 35 VAL n 1 36 ILE n 1 37 PRO n 1 38 ALA n 1 39 ALA n 1 40 VAL n 1 41 LEU n 1 42 MET n 1 43 MET n 1 44 PHE n 1 45 PHE n 1 46 PRO n 1 47 GLN n 1 48 LEU n 1 49 ALA n 1 50 MET n 1 51 ALA n 1 52 ALA n 1 53 GLY n 1 54 SER n 1 55 SER n 1 56 GLY n 1 57 GLN n 1 58 ASP n 1 59 LEU n 1 60 MET n 1 61 ALA n 1 62 SER n 1 63 GLY n 1 64 ASN n 1 65 THR n 1 66 THR n 1 67 VAL n 1 68 LYS n 1 69 ALA n 1 70 THR n 1 71 PHE n 1 72 GLY n 1 73 LYS n 1 74 ASP n 1 75 SER n 1 76 SER n 1 77 VAL n 1 78 VAL n 1 79 LYS n 1 80 TRP n 1 81 VAL n 1 82 VAL n 1 83 LEU n 1 84 ALA n 1 85 GLU n 1 86 VAL n 1 87 LEU n 1 88 VAL n 1 89 GLY n 1 90 ALA n 1 91 VAL n 1 92 MET n 1 93 TYR n 1 94 MET n 1 95 MET n 1 96 THR n 1 97 LYS n 1 98 ASN n 1 99 VAL n 1 100 LYS n 1 101 PHE n 1 102 LEU n 1 103 ALA n 1 104 GLY n 1 105 PHE n 1 106 ALA n 1 107 ILE n 1 108 ILE n 1 109 SER n 1 110 VAL n 1 111 PHE n 1 112 ILE n 1 113 ALA n 1 114 VAL n 1 115 GLY n 1 116 MET n 1 117 ALA n 1 118 VAL n 1 119 VAL n 1 120 GLY n 1 121 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 121 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 X41 non-polymer . 1-MYRISTOYL-2-MYRISTOLEOYL-SN-GLYCERO-3-PHOSPHATE ? 'C31 H58 O8 P -1' 589.761 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -50 ? ? ? A . n A 1 2 ASN 2 -49 ? ? ? A . n A 1 3 ALA 3 -48 ? ? ? A . n A 1 4 VAL 4 -47 ? ? ? A . n A 1 5 LEU 5 -46 ? ? ? A . n A 1 6 SER 6 -45 ? ? ? A . n A 1 7 VAL 7 -44 ? ? ? A . n A 1 8 GLN 8 -43 ? ? ? A . n A 1 9 GLY 9 -42 ? ? ? A . n A 1 10 ALA 10 -41 ? ? ? A . n A 1 11 SER 11 -40 ? ? ? A . n A 1 12 ALA 12 -39 ? ? ? A . n A 1 13 PRO 13 -38 ? ? ? A . n A 1 14 VAL 14 -37 ? ? ? A . n A 1 15 LYS 15 -36 ? ? ? A . n A 1 16 LYS 16 -35 ? ? ? A . n A 1 17 LYS 17 -34 ? ? ? A . n A 1 18 SER 18 -33 ? ? ? A . n A 1 19 PHE 19 -32 ? ? ? A . n A 1 20 PHE 20 -31 ? ? ? A . n A 1 21 SER 21 -30 ? ? ? A . n A 1 22 LYS 22 -29 ? ? ? A . n A 1 23 PHE 23 -28 ? ? ? A . n A 1 24 THR 24 -27 ? ? ? A . n A 1 25 ARG 25 -26 ? ? ? A . n A 1 26 LEU 26 -25 ? ? ? A . n A 1 27 ASN 27 -24 ? ? ? A . n A 1 28 MET 28 -23 ? ? ? A . n A 1 29 LEU 29 -22 ? ? ? A . n A 1 30 ARG 30 -21 ? ? ? A . n A 1 31 LEU 31 -20 ? ? ? A . n A 1 32 ALA 32 -19 ? ? ? A . n A 1 33 ARG 33 -18 ? ? ? A . n A 1 34 ALA 34 -17 ? ? ? A . n A 1 35 VAL 35 -16 ? ? ? A . n A 1 36 ILE 36 -15 ? ? ? A . n A 1 37 PRO 37 -14 ? ? ? A . n A 1 38 ALA 38 -13 ? ? ? A . n A 1 39 ALA 39 -12 ? ? ? A . n A 1 40 VAL 40 -11 ? ? ? A . n A 1 41 LEU 41 -10 ? ? ? A . n A 1 42 MET 42 -9 ? ? ? A . n A 1 43 MET 43 -8 ? ? ? A . n A 1 44 PHE 44 -7 ? ? ? A . n A 1 45 PHE 45 -6 ? ? ? A . n A 1 46 PRO 46 -5 ? ? ? A . n A 1 47 GLN 47 -4 ? ? ? A . n A 1 48 LEU 48 -3 ? ? ? A . n A 1 49 ALA 49 -2 ? ? ? A . n A 1 50 MET 50 -1 ? ? ? A . n A 1 51 ALA 51 0 ? ? ? A . n A 1 52 ALA 52 1 ? ? ? A . n A 1 53 GLY 53 2 ? ? ? A . n A 1 54 SER 54 3 ? ? ? A . n A 1 55 SER 55 4 ? ? ? A . n A 1 56 GLY 56 5 ? ? ? A . n A 1 57 GLN 57 6 6 GLN GLN A . n A 1 58 ASP 58 7 7 ASP ASP A . n A 1 59 LEU 59 8 8 LEU LEU A . n A 1 60 MET 60 9 9 MET MET A . n A 1 61 ALA 61 10 10 ALA ALA A . n A 1 62 SER 62 11 11 SER SER A . n A 1 63 GLY 63 12 12 GLY GLY A . n A 1 64 ASN 64 13 13 ASN ASN A . n A 1 65 THR 65 14 14 THR THR A . n A 1 66 THR 66 15 15 THR THR A . n A 1 67 VAL 67 16 16 VAL VAL A . n A 1 68 LYS 68 17 17 LYS LYS A . n A 1 69 ALA 69 18 18 ALA ALA A . n A 1 70 THR 70 19 19 THR THR A . n A 1 71 PHE 71 20 20 PHE PHE A . n A 1 72 GLY 72 21 21 GLY GLY A . n A 1 73 LYS 73 22 22 LYS LYS A . n A 1 74 ASP 74 23 23 ASP ASP A . n A 1 75 SER 75 24 24 SER SER A . n A 1 76 SER 76 25 25 SER SER A . n A 1 77 VAL 77 26 26 VAL VAL A . n A 1 78 VAL 78 27 27 VAL VAL A . n A 1 79 LYS 79 28 28 LYS LYS A . n A 1 80 TRP 80 29 29 TRP TRP A . n A 1 81 VAL 81 30 30 VAL VAL A . n A 1 82 VAL 82 31 31 VAL VAL A . n A 1 83 LEU 83 32 32 LEU LEU A . n A 1 84 ALA 84 33 33 ALA ALA A . n A 1 85 GLU 85 34 34 GLU GLU A . n A 1 86 VAL 86 35 35 VAL VAL A . n A 1 87 LEU 87 36 36 LEU LEU A . n A 1 88 VAL 88 37 37 VAL VAL A . n A 1 89 GLY 89 38 38 GLY GLY A . n A 1 90 ALA 90 39 39 ALA ALA A . n A 1 91 VAL 91 40 40 VAL VAL A . n A 1 92 MET 92 41 41 MET MET A . n A 1 93 TYR 93 42 42 TYR TYR A . n A 1 94 MET 94 43 43 MET MET A . n A 1 95 MET 95 44 44 MET MET A . n A 1 96 THR 96 45 45 THR THR A . n A 1 97 LYS 97 46 46 LYS LYS A . n A 1 98 ASN 98 47 47 ASN ASN A . n A 1 99 VAL 99 48 48 VAL VAL A . n A 1 100 LYS 100 49 49 LYS LYS A . n A 1 101 PHE 101 50 50 PHE PHE A . n A 1 102 LEU 102 51 51 LEU LEU A . n A 1 103 ALA 103 52 52 ALA ALA A . n A 1 104 GLY 104 53 53 GLY GLY A . n A 1 105 PHE 105 54 54 PHE PHE A . n A 1 106 ALA 106 55 55 ALA ALA A . n A 1 107 ILE 107 56 56 ILE ILE A . n A 1 108 ILE 108 57 57 ILE ILE A . n A 1 109 SER 109 58 58 SER SER A . n A 1 110 VAL 110 59 59 VAL VAL A . n A 1 111 PHE 111 60 60 PHE PHE A . n A 1 112 ILE 112 61 61 ILE ILE A . n A 1 113 ALA 113 62 62 ALA ALA A . n A 1 114 VAL 114 63 63 VAL VAL A . n A 1 115 GLY 115 64 64 GLY GLY A . n A 1 116 MET 116 65 65 MET MET A . n A 1 117 ALA 117 66 66 ALA ALA A . n A 1 118 VAL 118 67 67 VAL VAL A . n A 1 119 VAL 119 68 68 VAL VAL A . n A 1 120 GLY 120 69 69 GLY GLY A . n A 1 121 LEU 121 70 70 LEU LEU A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id X41 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id X41 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id X41 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 101 _pdbx_nonpoly_scheme.pdb_mon_id X41 _pdbx_nonpoly_scheme.auth_mon_id 46F _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9MOQ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9MOQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9MOQ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9MOQ _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.007 ? 581 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.718 ? 841 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 5.052 ? 311 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.045 ? 85 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 78 ? f_plane_restr ? ? # _struct.entry_id 9MOQ _struct.title 'Cryo-EM of F-pilus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9MOQ _struct_keywords.text 'Helical, lipid, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PIL1_ECOLI _struct_ref.pdbx_db_accession P04737 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNAVLSVQGASAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMFFPQLAMAAGSSGQDLMASGNTTVKATFGKDSSVVKW VVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9MOQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 121 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04737 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 121 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -50 _struct_ref_seq.pdbx_auth_seq_align_end 70 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'representative helical assembly' ? 50-meric 50 2 'helical asymmetric unit' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-50)' A,B 2 1 A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'helical symmetry operation' ? ? -0.77129100 0.63648200 0.00000000 111.84700 -0.63648200 -0.77129100 0.00000000 237.31000 0.00000000 0.00000000 1.00000000 -66.83000 3 'helical symmetry operation' ? ? -0.38068300 0.92470600 0.00000000 44.94110 -0.92470600 -0.38068300 0.00000000 227.21900 0.00000000 0.00000000 1.00000000 -53.46400 4 'helical symmetry operation' ? ? 0.09963240 0.99502400 0.00000000 -9.32936 -0.99502400 0.09963240 0.00000000 186.81000 0.00000000 -0.00000000 1.00000000 -40.09800 5 'helical symmetry operation' ? ? 0.55647000 0.83086800 0.00000000 -38.17600 -0.83086800 0.55647000 0.00000000 125.60500 0.00000000 -0.00000000 1.00000000 -26.73200 6 'helical symmetry operation' ? ? 0.88217600 0.47092000 0.00000000 -34.80110 -0.47092000 0.88217600 0.00000000 58.02650 0.00000000 -0.00000000 1.00000000 -13.36600 7 'helical symmetry operation' ? ? 0.88217600 -0.47092000 0.00000000 58.02650 0.47092000 0.88217600 0.00000000 -34.80110 -0.00000000 0.00000000 1.00000000 13.36600 8 'helical symmetry operation' ? ? 0.55647000 -0.83086800 0.00000000 125.60500 0.83086800 0.55647000 0.00000000 -38.17600 -0.00000000 0.00000000 1.00000000 26.73200 9 'helical symmetry operation' ? ? 0.09963240 -0.99502400 0.00000000 186.81000 0.99502400 0.09963240 0.00000000 -9.32936 -0.00000000 0.00000000 1.00000000 40.09800 10 'helical symmetry operation' ? ? -0.38068300 -0.92470600 0.00000000 227.21900 0.92470600 -0.38068300 0.00000000 44.94110 0.00000000 0.00000000 1.00000000 53.46400 11 'helical symmetry operation' ? ? 0.36698800 0.93022600 0.00000000 -29.29340 -0.93022600 0.36698800 0.00000000 154.07300 0.00000000 -0.00000000 1.00000000 -66.83000 12 'helical symmetry operation' ? ? 0.76181000 0.64780100 0.00000000 -40.37120 -0.64780100 0.76181000 0.00000000 87.32330 0.00000000 -0.00000000 1.00000000 -53.46400 13 'helical symmetry operation' ? ? 0.97711200 0.21272300 0.00000000 -18.71020 -0.21272300 0.97711200 0.00000000 23.22180 0.00000000 -0.00000000 1.00000000 -40.09800 14 'helical symmetry operation' ? ? 0.96216100 -0.27248200 0.00000000 30.58520 0.27248200 0.96216100 0.00000000 -23.12640 -0.00000000 0.00000000 1.00000000 -26.73200 15 'helical symmetry operation' ? ? 0.72047800 -0.69347700 0.00000000 95.89880 0.69347700 0.72047800 0.00000000 -40.79950 -0.00000000 0.00000000 1.00000000 -13.36600 16 'helical symmetry operation' ? ? 0.30901700 -0.95105700 0.00000000 161.83900 0.95105700 0.30901700 0.00000000 -25.63280 -0.00000000 0.00000000 1.00000000 0.00000 17 'helical symmetry operation' ? ? -0.17526400 -0.98452200 0.00000000 212.86800 0.98452200 -0.17526400 0.00000000 18.79950 0.00000000 0.00000000 1.00000000 13.36600 18 'helical symmetry operation' ? ? -0.61824400 -0.78598600 0.00000000 236.96100 0.78598600 -0.61824400 0.00000000 82.02730 0.00000000 0.00000000 1.00000000 26.73200 19 'helical symmetry operation' ? ? -0.91553600 -0.40223500 0.00000000 228.44000 0.40223500 -0.91553600 0.00000000 149.15100 0.00000000 0.00000000 1.00000000 40.09800 20 'helical symmetry operation' ? ? -0.99708500 0.07630140 0.00000000 189.31200 -0.07630140 -0.99708500 0.00000000 204.35300 0.00000000 0.00000000 1.00000000 53.46400 21 'helical symmetry operation' ? ? 0.99810300 -0.06157120 0.00000000 6.25545 0.06157120 0.99810300 0.00000000 -5.88145 -0.00000000 0.00000000 1.00000000 -66.83000 22 'helical symmetry operation' ? ? 0.85150700 -0.52434300 0.00000000 66.31460 0.52434300 0.85150700 0.00000000 -37.04380 -0.00000000 0.00000000 1.00000000 -53.46400 23 'helical symmetry operation' ? ? 0.50425600 -0.86355400 0.00000000 133.97200 0.86355400 0.50425600 0.00000000 -36.25140 -0.00000000 0.00000000 1.00000000 -40.09800 24 'helical symmetry operation' ? ? 0.03817850 -0.99927100 0.00000000 193.28500 0.99927100 0.03817850 0.00000000 -3.69102 -0.00000000 0.00000000 1.00000000 -26.73200 25 'helical symmetry operation' ? ? -0.43689600 -0.89951200 0.00000000 230.27600 0.89951200 -0.43689600 0.00000000 52.96460 0.00000000 0.00000000 1.00000000 -13.36600 26 'helical symmetry operation' ? ? -0.80901700 -0.58778500 0.00000000 236.22900 0.58778500 -0.80901700 0.00000000 120.36500 0.00000000 0.00000000 1.00000000 0.00000 27 'helical symmetry operation' ? ? -0.99049500 -0.13754800 0.00000000 209.74000 0.13754800 -0.99049500 0.00000000 182.62600 0.00000000 0.00000000 1.00000000 13.36600 28 'helical symmetry operation' ? ? -0.93856500 0.34510200 0.00000000 157.05200 -0.34510200 -0.93856500 0.00000000 225.07800 0.00000000 0.00000000 1.00000000 26.73200 29 'helical symmetry operation' ? ? -0.66546500 0.74642900 0.00000000 90.58020 -0.74642900 -0.66546500 0.00000000 237.71600 0.00000000 0.00000000 1.00000000 40.09800 30 'helical symmetry operation' ? ? -0.23554900 0.97186200 0.00000000 25.98900 -0.97186200 -0.23554900 0.00000000 217.56200 0.00000000 0.00000000 1.00000000 53.46400 31 'helical symmetry operation' ? ? 0.24987300 -0.96827900 0.00000000 169.36600 0.96827900 0.24987300 0.00000000 -21.50100 -0.00000000 0.00000000 1.00000000 -66.83000 32 'helical symmetry operation' ? ? -0.23554900 -0.97186200 0.00000000 217.56200 0.97186200 -0.23554900 0.00000000 25.98900 0.00000000 0.00000000 1.00000000 -53.46400 33 'helical symmetry operation' ? ? -0.66546500 -0.74642900 0.00000000 237.71600 0.74642900 -0.66546500 0.00000000 90.58020 0.00000000 0.00000000 1.00000000 -40.09800 34 'helical symmetry operation' ? ? -0.93856500 -0.34510200 0.00000000 225.07800 0.34510200 -0.93856500 0.00000000 157.05200 0.00000000 0.00000000 1.00000000 -26.73200 35 'helical symmetry operation' ? ? -0.99049500 0.13754800 0.00000000 182.62600 -0.13754800 -0.99049500 0.00000000 209.74000 0.00000000 0.00000000 1.00000000 -13.36600 36 'helical symmetry operation' ? ? -0.80901700 0.58778500 0.00000000 120.36500 -0.58778500 -0.80901700 0.00000000 236.22900 0.00000000 0.00000000 1.00000000 0.00000 37 'helical symmetry operation' ? ? -0.43689600 0.89951200 0.00000000 52.96460 -0.89951200 -0.43689600 0.00000000 230.27600 0.00000000 0.00000000 1.00000000 13.36600 38 'helical symmetry operation' ? ? 0.03817850 0.99927100 0.00000000 -3.69102 -0.99927100 0.03817850 0.00000000 193.28500 0.00000000 -0.00000000 1.00000000 26.73200 39 'helical symmetry operation' ? ? 0.50425600 0.86355400 0.00000000 -36.25140 -0.86355400 0.50425600 0.00000000 133.97200 0.00000000 -0.00000000 1.00000000 40.09800 40 'helical symmetry operation' ? ? 0.85150700 0.52434300 0.00000000 -37.04380 -0.52434300 0.85150700 0.00000000 66.31460 0.00000000 -0.00000000 1.00000000 53.46400 41 'helical symmetry operation' ? ? -0.84367300 -0.53685800 0.00000000 234.62500 0.53685800 -0.84367300 0.00000000 128.80000 0.00000000 0.00000000 1.00000000 -66.83000 42 'helical symmetry operation' ? ? -0.99708500 -0.07630140 0.00000000 204.35300 0.07630140 -0.99708500 0.00000000 189.31200 0.00000000 0.00000000 1.00000000 -53.46400 43 'helical symmetry operation' ? ? -0.91553600 0.40223500 0.00000000 149.15100 -0.40223500 -0.91553600 0.00000000 228.44000 0.00000000 0.00000000 1.00000000 -40.09800 44 'helical symmetry operation' ? ? -0.61824400 0.78598600 0.00000000 82.02730 -0.78598600 -0.61824400 0.00000000 236.96100 0.00000000 0.00000000 1.00000000 -26.73200 45 'helical symmetry operation' ? ? -0.17526400 0.98452200 0.00000000 18.79950 -0.98452200 -0.17526400 0.00000000 212.86800 0.00000000 0.00000000 1.00000000 -13.36600 46 'helical symmetry operation' ? ? 0.30901700 0.95105700 0.00000000 -25.63280 -0.95105700 0.30901700 0.00000000 161.83900 0.00000000 -0.00000000 1.00000000 0.00000 47 'helical symmetry operation' ? ? 0.72047800 0.69347700 0.00000000 -40.79950 -0.69347700 0.72047800 0.00000000 95.89880 0.00000000 -0.00000000 1.00000000 13.36600 48 'helical symmetry operation' ? ? 0.96216100 0.27248200 0.00000000 -23.12640 -0.27248200 0.96216100 0.00000000 30.58520 0.00000000 -0.00000000 1.00000000 26.73200 49 'helical symmetry operation' ? ? 0.97711200 -0.21272300 0.00000000 23.22180 0.21272300 0.97711200 0.00000000 -18.71020 -0.00000000 0.00000000 1.00000000 40.09800 50 'helical symmetry operation' ? ? 0.76181000 -0.64780100 0.00000000 87.32330 0.64780100 0.76181000 0.00000000 -40.37120 -0.00000000 0.00000000 1.00000000 53.46400 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 60 ? SER A 62 ? MET A 9 SER A 11 5 ? 3 HELX_P HELX_P2 AA2 GLY A 63 ? PHE A 71 ? GLY A 12 PHE A 20 1 ? 9 HELX_P HELX_P3 AA3 SER A 75 ? LYS A 97 ? SER A 24 LYS A 46 1 ? 23 HELX_P HELX_P4 AA4 ASN A 98 ? LEU A 102 ? ASN A 47 LEU A 51 5 ? 5 HELX_P HELX_P5 AA5 ALA A 103 ? GLY A 120 ? ALA A 52 GLY A 69 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 9MOQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 23 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -101.80 _pdbx_validate_torsion.psi 79.07 # _pdbx_helical_symmetry.entry_id 9MOQ _pdbx_helical_symmetry.number_of_operations 10 _pdbx_helical_symmetry.rotation_per_n_subunits 28.094 _pdbx_helical_symmetry.rise_per_n_subunits 13.366 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 5 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9MOQ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9MOQ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.5 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 89344 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name F-pilus _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9MOQ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode OTHER _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9MOQ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9MOQ _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -50 ? A MET 1 2 1 Y 1 A ASN -49 ? A ASN 2 3 1 Y 1 A ALA -48 ? A ALA 3 4 1 Y 1 A VAL -47 ? A VAL 4 5 1 Y 1 A LEU -46 ? A LEU 5 6 1 Y 1 A SER -45 ? A SER 6 7 1 Y 1 A VAL -44 ? A VAL 7 8 1 Y 1 A GLN -43 ? A GLN 8 9 1 Y 1 A GLY -42 ? A GLY 9 10 1 Y 1 A ALA -41 ? A ALA 10 11 1 Y 1 A SER -40 ? A SER 11 12 1 Y 1 A ALA -39 ? A ALA 12 13 1 Y 1 A PRO -38 ? A PRO 13 14 1 Y 1 A VAL -37 ? A VAL 14 15 1 Y 1 A LYS -36 ? A LYS 15 16 1 Y 1 A LYS -35 ? A LYS 16 17 1 Y 1 A LYS -34 ? A LYS 17 18 1 Y 1 A SER -33 ? A SER 18 19 1 Y 1 A PHE -32 ? A PHE 19 20 1 Y 1 A PHE -31 ? A PHE 20 21 1 Y 1 A SER -30 ? A SER 21 22 1 Y 1 A LYS -29 ? A LYS 22 23 1 Y 1 A PHE -28 ? A PHE 23 24 1 Y 1 A THR -27 ? A THR 24 25 1 Y 1 A ARG -26 ? A ARG 25 26 1 Y 1 A LEU -25 ? A LEU 26 27 1 Y 1 A ASN -24 ? A ASN 27 28 1 Y 1 A MET -23 ? A MET 28 29 1 Y 1 A LEU -22 ? A LEU 29 30 1 Y 1 A ARG -21 ? A ARG 30 31 1 Y 1 A LEU -20 ? A LEU 31 32 1 Y 1 A ALA -19 ? A ALA 32 33 1 Y 1 A ARG -18 ? A ARG 33 34 1 Y 1 A ALA -17 ? A ALA 34 35 1 Y 1 A VAL -16 ? A VAL 35 36 1 Y 1 A ILE -15 ? A ILE 36 37 1 Y 1 A PRO -14 ? A PRO 37 38 1 Y 1 A ALA -13 ? A ALA 38 39 1 Y 1 A ALA -12 ? A ALA 39 40 1 Y 1 A VAL -11 ? A VAL 40 41 1 Y 1 A LEU -10 ? A LEU 41 42 1 Y 1 A MET -9 ? A MET 42 43 1 Y 1 A MET -8 ? A MET 43 44 1 Y 1 A PHE -7 ? A PHE 44 45 1 Y 1 A PHE -6 ? A PHE 45 46 1 Y 1 A PRO -5 ? A PRO 46 47 1 Y 1 A GLN -4 ? A GLN 47 48 1 Y 1 A LEU -3 ? A LEU 48 49 1 Y 1 A ALA -2 ? A ALA 49 50 1 Y 1 A MET -1 ? A MET 50 51 1 Y 1 A ALA 0 ? A ALA 51 52 1 Y 1 A ALA 1 ? A ALA 52 53 1 Y 1 A GLY 2 ? A GLY 53 54 1 Y 1 A SER 3 ? A SER 54 55 1 Y 1 A SER 4 ? A SER 55 56 1 Y 1 A GLY 5 ? A GLY 56 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 MET N N N N 192 MET CA C N S 193 MET C C N N 194 MET O O N N 195 MET CB C N N 196 MET CG C N N 197 MET SD S N N 198 MET CE C N N 199 MET OXT O N N 200 MET H H N N 201 MET H2 H N N 202 MET HA H N N 203 MET HB2 H N N 204 MET HB3 H N N 205 MET HG2 H N N 206 MET HG3 H N N 207 MET HE1 H N N 208 MET HE2 H N N 209 MET HE3 H N N 210 MET HXT H N N 211 PHE N N N N 212 PHE CA C N S 213 PHE C C N N 214 PHE O O N N 215 PHE CB C N N 216 PHE CG C Y N 217 PHE CD1 C Y N 218 PHE CD2 C Y N 219 PHE CE1 C Y N 220 PHE CE2 C Y N 221 PHE CZ C Y N 222 PHE OXT O N N 223 PHE H H N N 224 PHE H2 H N N 225 PHE HA H N N 226 PHE HB2 H N N 227 PHE HB3 H N N 228 PHE HD1 H N N 229 PHE HD2 H N N 230 PHE HE1 H N N 231 PHE HE2 H N N 232 PHE HZ H N N 233 PHE HXT H N N 234 PRO N N N N 235 PRO CA C N S 236 PRO C C N N 237 PRO O O N N 238 PRO CB C N N 239 PRO CG C N N 240 PRO CD C N N 241 PRO OXT O N N 242 PRO H H N N 243 PRO HA H N N 244 PRO HB2 H N N 245 PRO HB3 H N N 246 PRO HG2 H N N 247 PRO HG3 H N N 248 PRO HD2 H N N 249 PRO HD3 H N N 250 PRO HXT H N N 251 SER N N N N 252 SER CA C N S 253 SER C C N N 254 SER O O N N 255 SER CB C N N 256 SER OG O N N 257 SER OXT O N N 258 SER H H N N 259 SER H2 H N N 260 SER HA H N N 261 SER HB2 H N N 262 SER HB3 H N N 263 SER HG H N N 264 SER HXT H N N 265 THR N N N N 266 THR CA C N S 267 THR C C N N 268 THR O O N N 269 THR CB C N R 270 THR OG1 O N N 271 THR CG2 C N N 272 THR OXT O N N 273 THR H H N N 274 THR H2 H N N 275 THR HA H N N 276 THR HB H N N 277 THR HG1 H N N 278 THR HG21 H N N 279 THR HG22 H N N 280 THR HG23 H N N 281 THR HXT H N N 282 TRP N N N N 283 TRP CA C N S 284 TRP C C N N 285 TRP O O N N 286 TRP CB C N N 287 TRP CG C Y N 288 TRP CD1 C Y N 289 TRP CD2 C Y N 290 TRP NE1 N Y N 291 TRP CE2 C Y N 292 TRP CE3 C Y N 293 TRP CZ2 C Y N 294 TRP CZ3 C Y N 295 TRP CH2 C Y N 296 TRP OXT O N N 297 TRP H H N N 298 TRP H2 H N N 299 TRP HA H N N 300 TRP HB2 H N N 301 TRP HB3 H N N 302 TRP HD1 H N N 303 TRP HE1 H N N 304 TRP HE3 H N N 305 TRP HZ2 H N N 306 TRP HZ3 H N N 307 TRP HH2 H N N 308 TRP HXT H N N 309 TYR N N N N 310 TYR CA C N S 311 TYR C C N N 312 TYR O O N N 313 TYR CB C N N 314 TYR CG C Y N 315 TYR CD1 C Y N 316 TYR CD2 C Y N 317 TYR CE1 C Y N 318 TYR CE2 C Y N 319 TYR CZ C Y N 320 TYR OH O N N 321 TYR OXT O N N 322 TYR H H N N 323 TYR H2 H N N 324 TYR HA H N N 325 TYR HB2 H N N 326 TYR HB3 H N N 327 TYR HD1 H N N 328 TYR HD2 H N N 329 TYR HE1 H N N 330 TYR HE2 H N N 331 TYR HH H N N 332 TYR HXT H N N 333 VAL N N N N 334 VAL CA C N S 335 VAL C C N N 336 VAL O O N N 337 VAL CB C N N 338 VAL CG1 C N N 339 VAL CG2 C N N 340 VAL OXT O N N 341 VAL H H N N 342 VAL H2 H N N 343 VAL HA H N N 344 VAL HB H N N 345 VAL HG11 H N N 346 VAL HG12 H N N 347 VAL HG13 H N N 348 VAL HG21 H N N 349 VAL HG22 H N N 350 VAL HG23 H N N 351 VAL HXT H N N 352 X41 O1 O N N 353 X41 O2 O N N 354 X41 P1 P N N 355 X41 O3 O N N 356 X41 O4 O N N 357 X41 C1 C N N 358 X41 C2 C N R 359 X41 C3 C N N 360 X41 O5 O N N 361 X41 C4 C N N 362 X41 O6 O N N 363 X41 C5 C N N 364 X41 C6 C N N 365 X41 C7 C N N 366 X41 C8 C N N 367 X41 C9 C N N 368 X41 C10 C N N 369 X41 C11 C N N 370 X41 C12 C N N 371 X41 C13 C N N 372 X41 C14 C N N 373 X41 C15 C N N 374 X41 C16 C N N 375 X41 C17 C N N 376 X41 O7 O N N 377 X41 C18 C N N 378 X41 O8 O N N 379 X41 C19 C N N 380 X41 C20 C N N 381 X41 C21 C N N 382 X41 C22 C N N 383 X41 C23 C N N 384 X41 C24 C N N 385 X41 C25 C N N 386 X41 C26 C N N 387 X41 C27 C N N 388 X41 C28 C N N 389 X41 C29 C N N 390 X41 C30 C N N 391 X41 C31 C N N 392 X41 H1 H N N 393 X41 H2 H N N 394 X41 H3 H N N 395 X41 H4 H N N 396 X41 H5 H N N 397 X41 H6 H N N 398 X41 H7 H N N 399 X41 H8 H N N 400 X41 H9 H N N 401 X41 H10 H N N 402 X41 H11 H N N 403 X41 H12 H N N 404 X41 H13 H N N 405 X41 H14 H N N 406 X41 H15 H N N 407 X41 H16 H N N 408 X41 H17 H N N 409 X41 H18 H N N 410 X41 H19 H N N 411 X41 H20 H N N 412 X41 H21 H N N 413 X41 H22 H N N 414 X41 H23 H N N 415 X41 H24 H N N 416 X41 H25 H N N 417 X41 H26 H N N 418 X41 H27 H N N 419 X41 H28 H N N 420 X41 H29 H N N 421 X41 H30 H N N 422 X41 H31 H N N 423 X41 H32 H N N 424 X41 H33 H N N 425 X41 H34 H N N 426 X41 H35 H N N 427 X41 H36 H N N 428 X41 H37 H N N 429 X41 H38 H N N 430 X41 H39 H N N 431 X41 H40 H N N 432 X41 H41 H N N 433 X41 H42 H N N 434 X41 H43 H N N 435 X41 H44 H N N 436 X41 H45 H N N 437 X41 H46 H N N 438 X41 H47 H N N 439 X41 H48 H N N 440 X41 H49 H N N 441 X41 H50 H N N 442 X41 H51 H N N 443 X41 H52 H N N 444 X41 H53 H N N 445 X41 H54 H N N 446 X41 H55 H N N 447 X41 H56 H N N 448 X41 H57 H N N 449 X41 H58 H N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 ILE N CA sing N N 116 ILE N H sing N N 117 ILE N H2 sing N N 118 ILE CA C sing N N 119 ILE CA CB sing N N 120 ILE CA HA sing N N 121 ILE C O doub N N 122 ILE C OXT sing N N 123 ILE CB CG1 sing N N 124 ILE CB CG2 sing N N 125 ILE CB HB sing N N 126 ILE CG1 CD1 sing N N 127 ILE CG1 HG12 sing N N 128 ILE CG1 HG13 sing N N 129 ILE CG2 HG21 sing N N 130 ILE CG2 HG22 sing N N 131 ILE CG2 HG23 sing N N 132 ILE CD1 HD11 sing N N 133 ILE CD1 HD12 sing N N 134 ILE CD1 HD13 sing N N 135 ILE OXT HXT sing N N 136 LEU N CA sing N N 137 LEU N H sing N N 138 LEU N H2 sing N N 139 LEU CA C sing N N 140 LEU CA CB sing N N 141 LEU CA HA sing N N 142 LEU C O doub N N 143 LEU C OXT sing N N 144 LEU CB CG sing N N 145 LEU CB HB2 sing N N 146 LEU CB HB3 sing N N 147 LEU CG CD1 sing N N 148 LEU CG CD2 sing N N 149 LEU CG HG sing N N 150 LEU CD1 HD11 sing N N 151 LEU CD1 HD12 sing N N 152 LEU CD1 HD13 sing N N 153 LEU CD2 HD21 sing N N 154 LEU CD2 HD22 sing N N 155 LEU CD2 HD23 sing N N 156 LEU OXT HXT sing N N 157 LYS N CA sing N N 158 LYS N H sing N N 159 LYS N H2 sing N N 160 LYS CA C sing N N 161 LYS CA CB sing N N 162 LYS CA HA sing N N 163 LYS C O doub N N 164 LYS C OXT sing N N 165 LYS CB CG sing N N 166 LYS CB HB2 sing N N 167 LYS CB HB3 sing N N 168 LYS CG CD sing N N 169 LYS CG HG2 sing N N 170 LYS CG HG3 sing N N 171 LYS CD CE sing N N 172 LYS CD HD2 sing N N 173 LYS CD HD3 sing N N 174 LYS CE NZ sing N N 175 LYS CE HE2 sing N N 176 LYS CE HE3 sing N N 177 LYS NZ HZ1 sing N N 178 LYS NZ HZ2 sing N N 179 LYS NZ HZ3 sing N N 180 LYS OXT HXT sing N N 181 MET N CA sing N N 182 MET N H sing N N 183 MET N H2 sing N N 184 MET CA C sing N N 185 MET CA CB sing N N 186 MET CA HA sing N N 187 MET C O doub N N 188 MET C OXT sing N N 189 MET CB CG sing N N 190 MET CB HB2 sing N N 191 MET CB HB3 sing N N 192 MET CG SD sing N N 193 MET CG HG2 sing N N 194 MET CG HG3 sing N N 195 MET SD CE sing N N 196 MET CE HE1 sing N N 197 MET CE HE2 sing N N 198 MET CE HE3 sing N N 199 MET OXT HXT sing N N 200 PHE N CA sing N N 201 PHE N H sing N N 202 PHE N H2 sing N N 203 PHE CA C sing N N 204 PHE CA CB sing N N 205 PHE CA HA sing N N 206 PHE C O doub N N 207 PHE C OXT sing N N 208 PHE CB CG sing N N 209 PHE CB HB2 sing N N 210 PHE CB HB3 sing N N 211 PHE CG CD1 doub Y N 212 PHE CG CD2 sing Y N 213 PHE CD1 CE1 sing Y N 214 PHE CD1 HD1 sing N N 215 PHE CD2 CE2 doub Y N 216 PHE CD2 HD2 sing N N 217 PHE CE1 CZ doub Y N 218 PHE CE1 HE1 sing N N 219 PHE CE2 CZ sing Y N 220 PHE CE2 HE2 sing N N 221 PHE CZ HZ sing N N 222 PHE OXT HXT sing N N 223 PRO N CA sing N N 224 PRO N CD sing N N 225 PRO N H sing N N 226 PRO CA C sing N N 227 PRO CA CB sing N N 228 PRO CA HA sing N N 229 PRO C O doub N N 230 PRO C OXT sing N N 231 PRO CB CG sing N N 232 PRO CB HB2 sing N N 233 PRO CB HB3 sing N N 234 PRO CG CD sing N N 235 PRO CG HG2 sing N N 236 PRO CG HG3 sing N N 237 PRO CD HD2 sing N N 238 PRO CD HD3 sing N N 239 PRO OXT HXT sing N N 240 SER N CA sing N N 241 SER N H sing N N 242 SER N H2 sing N N 243 SER CA C sing N N 244 SER CA CB sing N N 245 SER CA HA sing N N 246 SER C O doub N N 247 SER C OXT sing N N 248 SER CB OG sing N N 249 SER CB HB2 sing N N 250 SER CB HB3 sing N N 251 SER OG HG sing N N 252 SER OXT HXT sing N N 253 THR N CA sing N N 254 THR N H sing N N 255 THR N H2 sing N N 256 THR CA C sing N N 257 THR CA CB sing N N 258 THR CA HA sing N N 259 THR C O doub N N 260 THR C OXT sing N N 261 THR CB OG1 sing N N 262 THR CB CG2 sing N N 263 THR CB HB sing N N 264 THR OG1 HG1 sing N N 265 THR CG2 HG21 sing N N 266 THR CG2 HG22 sing N N 267 THR CG2 HG23 sing N N 268 THR OXT HXT sing N N 269 TRP N CA sing N N 270 TRP N H sing N N 271 TRP N H2 sing N N 272 TRP CA C sing N N 273 TRP CA CB sing N N 274 TRP CA HA sing N N 275 TRP C O doub N N 276 TRP C OXT sing N N 277 TRP CB CG sing N N 278 TRP CB HB2 sing N N 279 TRP CB HB3 sing N N 280 TRP CG CD1 doub Y N 281 TRP CG CD2 sing Y N 282 TRP CD1 NE1 sing Y N 283 TRP CD1 HD1 sing N N 284 TRP CD2 CE2 doub Y N 285 TRP CD2 CE3 sing Y N 286 TRP NE1 CE2 sing Y N 287 TRP NE1 HE1 sing N N 288 TRP CE2 CZ2 sing Y N 289 TRP CE3 CZ3 doub Y N 290 TRP CE3 HE3 sing N N 291 TRP CZ2 CH2 doub Y N 292 TRP CZ2 HZ2 sing N N 293 TRP CZ3 CH2 sing Y N 294 TRP CZ3 HZ3 sing N N 295 TRP CH2 HH2 sing N N 296 TRP OXT HXT sing N N 297 TYR N CA sing N N 298 TYR N H sing N N 299 TYR N H2 sing N N 300 TYR CA C sing N N 301 TYR CA CB sing N N 302 TYR CA HA sing N N 303 TYR C O doub N N 304 TYR C OXT sing N N 305 TYR CB CG sing N N 306 TYR CB HB2 sing N N 307 TYR CB HB3 sing N N 308 TYR CG CD1 doub Y N 309 TYR CG CD2 sing Y N 310 TYR CD1 CE1 sing Y N 311 TYR CD1 HD1 sing N N 312 TYR CD2 CE2 doub Y N 313 TYR CD2 HD2 sing N N 314 TYR CE1 CZ doub Y N 315 TYR CE1 HE1 sing N N 316 TYR CE2 CZ sing Y N 317 TYR CE2 HE2 sing N N 318 TYR CZ OH sing N N 319 TYR OH HH sing N N 320 TYR OXT HXT sing N N 321 VAL N CA sing N N 322 VAL N H sing N N 323 VAL N H2 sing N N 324 VAL CA C sing N N 325 VAL CA CB sing N N 326 VAL CA HA sing N N 327 VAL C O doub N N 328 VAL C OXT sing N N 329 VAL CB CG1 sing N N 330 VAL CB CG2 sing N N 331 VAL CB HB sing N N 332 VAL CG1 HG11 sing N N 333 VAL CG1 HG12 sing N N 334 VAL CG1 HG13 sing N N 335 VAL CG2 HG21 sing N N 336 VAL CG2 HG22 sing N N 337 VAL CG2 HG23 sing N N 338 VAL OXT HXT sing N N 339 X41 O1 P1 sing N N 340 X41 O2 P1 doub N N 341 X41 P1 O3 sing N N 342 X41 P1 O4 sing N N 343 X41 O3 H1 sing N N 344 X41 O4 C1 sing N N 345 X41 C1 C2 sing N N 346 X41 C1 H2 sing N N 347 X41 C1 H3 sing N N 348 X41 C2 C3 sing N N 349 X41 C2 O7 sing N N 350 X41 C2 H4 sing N N 351 X41 C3 O5 sing N N 352 X41 C3 H5 sing N N 353 X41 C3 H6 sing N N 354 X41 O5 C4 sing N N 355 X41 C4 O6 doub N N 356 X41 C4 C5 sing N N 357 X41 C5 C6 sing N N 358 X41 C5 H7 sing N N 359 X41 C5 H8 sing N N 360 X41 C6 C7 sing N N 361 X41 C6 H9 sing N N 362 X41 C6 H10 sing N N 363 X41 C7 C8 sing N N 364 X41 C7 H11 sing N N 365 X41 C7 H12 sing N N 366 X41 C8 C9 sing N N 367 X41 C8 H13 sing N N 368 X41 C8 H14 sing N N 369 X41 C9 C10 sing N N 370 X41 C9 H15 sing N N 371 X41 C9 H16 sing N N 372 X41 C10 C11 sing N N 373 X41 C10 H17 sing N N 374 X41 C10 H18 sing N N 375 X41 C11 C12 sing N N 376 X41 C11 H19 sing N N 377 X41 C11 H20 sing N N 378 X41 C12 C13 doub N Z 379 X41 C12 H21 sing N N 380 X41 C13 C14 sing N N 381 X41 C13 H22 sing N N 382 X41 C14 C15 sing N N 383 X41 C14 H23 sing N N 384 X41 C14 H24 sing N N 385 X41 C15 C16 sing N N 386 X41 C15 H25 sing N N 387 X41 C15 H26 sing N N 388 X41 C16 C17 sing N N 389 X41 C16 H27 sing N N 390 X41 C16 H28 sing N N 391 X41 C17 H29 sing N N 392 X41 C17 H30 sing N N 393 X41 C17 H31 sing N N 394 X41 O7 C18 sing N N 395 X41 C18 O8 doub N N 396 X41 C18 C19 sing N N 397 X41 C19 C20 sing N N 398 X41 C19 H32 sing N N 399 X41 C19 H33 sing N N 400 X41 C20 C21 sing N N 401 X41 C20 H34 sing N N 402 X41 C20 H35 sing N N 403 X41 C21 C22 sing N N 404 X41 C21 H36 sing N N 405 X41 C21 H37 sing N N 406 X41 C22 C23 sing N N 407 X41 C22 H38 sing N N 408 X41 C22 H39 sing N N 409 X41 C23 C24 sing N N 410 X41 C23 H40 sing N N 411 X41 C23 H41 sing N N 412 X41 C24 C25 sing N N 413 X41 C24 H42 sing N N 414 X41 C24 H43 sing N N 415 X41 C25 C26 sing N N 416 X41 C25 H44 sing N N 417 X41 C25 H45 sing N N 418 X41 C26 C27 sing N N 419 X41 C26 H46 sing N N 420 X41 C26 H47 sing N N 421 X41 C27 C28 sing N N 422 X41 C27 H48 sing N N 423 X41 C27 H49 sing N N 424 X41 C28 C29 sing N N 425 X41 C28 H50 sing N N 426 X41 C28 H51 sing N N 427 X41 C29 C30 sing N N 428 X41 C29 H52 sing N N 429 X41 C29 H53 sing N N 430 X41 C30 C31 sing N N 431 X41 C30 H54 sing N N 432 X41 C30 H55 sing N N 433 X41 C31 H56 sing N N 434 X41 C31 H57 sing N N 435 X41 C31 H58 sing N N 436 # _em_admin.current_status REL _em_admin.deposition_date 2024-12-26 _em_admin.deposition_site RCSB _em_admin.entry_id 9MOQ _em_admin.last_update 2025-01-15 _em_admin.map_release_date 2025-01-15 _em_admin.title 'Cryo-EM of F-pilus' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 562 _em_entity_assembly_naturalsource.organism 'Escherichia coli' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C5 _em_helical_entity.angular_rotation_per_subunit 28.094 _em_helical_entity.axial_rise_per_subunit 13.366 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.15.2_3472: 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? MASKING ? 4 ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM122510 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9MOQ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_