HEADER IMMUNE SYSTEM 06-JAN-25 9MQR TITLE A8 FAB IN COMPLEX WITH CD97 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADHESION G PROTEIN-COUPLED RECEPTOR E5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LEUKOCYTE ANTIGEN CD97; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HEAVY CHAIN OF A8 FAB; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: LIGHT CHAIN OF A8 FAB; COMPND 13 CHAIN: E; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADGRE5, CD97; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN COMPLEX, ANTIBODY, ADHESION G PROTEIN-COUPLED RECEPTOR, KEYWDS 2 IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR T.HATTORI,I.BANG,M.FANG,S.KOIDE REVDAT 2 15-OCT-25 9MQR 1 JRNL REVDAT 1 24-SEP-25 9MQR 0 JRNL AUTH T.HATTORI,M.WANG,A.D.CORRADO,S.GROSS,M.FANG,I.BANG,N.ROY, JRNL AUTH 2 I.BEREZNIUK,H.DONALDSON,K.GROFF,N.RAVN-BOESS,A.KOIDE, JRNL AUTH 3 D.G.PLACANTONAKIS,C.Y.PARK,S.KOIDE JRNL TITL ENGINEERING ANTIBODY-DRUG CONJUGATES TARGETING AN ADHESION JRNL TITL 2 GPCR, CD97. JRNL REF PROC.NATL.ACAD.SCI.USA V. 122 27122 2025 JRNL REFN ESSN 1091-6490 JRNL PMID 41026810 JRNL DOI 10.1073/PNAS.2516627122 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.HATTORI,M.WANG,A.D.CORRADO,S.GROSS,M.FANG,I.BANG,N.ROY, REMARK 1 AUTH 2 I.BEREZNIUK,H.DONALDSON,K.GROFF,N.RAVN-BOESS,A.KOIDE, REMARK 1 AUTH 3 D.G.PLACANTONAKIS,C.Y.PARK,S.KOIDE REMARK 1 TITL ENGINEERING ANTIBODY-DRUG CONJUGATES TARGETING AN ADHESION REMARK 1 TITL 2 GPCR, CD97 REMARK 1 REF BIORXIV 2025 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2025.08.24.671942 REMARK 2 REMARK 2 RESOLUTION. 3.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6AZ2 REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.160 REMARK 3 NUMBER OF PARTICLES : 89719 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9MQR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000291225. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : A8 FAB IN COMPLEX WITH CD97 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 5.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4853.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 21 REMARK 465 ASP A 22 REMARK 465 SER A 23 REMARK 465 ARG A 24 REMARK 465 GLY A 25 REMARK 465 CYS A 26 REMARK 465 ALA A 27 REMARK 465 ARG A 28 REMARK 465 TRP A 29 REMARK 465 CYS A 30 REMARK 465 PRO A 31 REMARK 465 GLN A 32 REMARK 465 ASN A 33 REMARK 465 SER A 34 REMARK 465 SER A 35 REMARK 465 CYS A 36 REMARK 465 VAL A 37 REMARK 465 ASN A 38 REMARK 465 ALA A 39 REMARK 465 THR A 40 REMARK 465 ALA A 41 REMARK 465 CYS A 42 REMARK 465 ARG A 43 REMARK 465 CYS A 44 REMARK 465 ASN A 45 REMARK 465 PRO A 46 REMARK 465 GLY A 47 REMARK 465 PHE A 48 REMARK 465 SER A 49 REMARK 465 SER A 50 REMARK 465 PHE A 51 REMARK 465 SER A 52 REMARK 465 GLU A 53 REMARK 465 ILE A 54 REMARK 465 ILE A 55 REMARK 465 THR A 56 REMARK 465 THR A 57 REMARK 465 PRO A 58 REMARK 465 THR A 59 REMARK 465 GLU A 60 REMARK 465 THR A 61 REMARK 465 CYS A 62 REMARK 465 ASP A 63 REMARK 465 ASP A 64 REMARK 465 ILE A 65 REMARK 465 ASN A 66 REMARK 465 GLU A 67 REMARK 465 CYS A 68 REMARK 465 ALA A 69 REMARK 465 THR A 70 REMARK 465 PRO A 71 REMARK 465 SER A 72 REMARK 465 LYS A 73 REMARK 465 VAL A 74 REMARK 465 SER A 75 REMARK 465 CYS A 76 REMARK 465 GLY A 77 REMARK 465 LYS A 78 REMARK 465 PHE A 79 REMARK 465 SER A 80 REMARK 465 ASP A 81 REMARK 465 CYS A 82 REMARK 465 TRP A 83 REMARK 465 ASN A 84 REMARK 465 THR A 85 REMARK 465 GLU A 86 REMARK 465 GLY A 87 REMARK 465 SER A 88 REMARK 465 TYR A 89 REMARK 465 ASP A 90 REMARK 465 CYS A 91 REMARK 465 VAL A 92 REMARK 465 CYS A 93 REMARK 465 SER A 94 REMARK 465 PRO A 95 REMARK 465 GLY A 96 REMARK 465 TYR A 97 REMARK 465 GLU A 98 REMARK 465 PRO A 99 REMARK 465 VAL A 100 REMARK 465 SER A 101 REMARK 465 GLY A 102 REMARK 465 ALA A 103 REMARK 465 LYS A 104 REMARK 465 THR A 105 REMARK 465 PHE A 106 REMARK 465 LYS A 107 REMARK 465 ASN A 108 REMARK 465 GLU A 109 REMARK 465 SER A 110 REMARK 465 GLU A 111 REMARK 465 ASN A 112 REMARK 465 THR A 113 REMARK 465 CYS A 114 REMARK 465 GLN A 115 REMARK 465 ASP A 116 REMARK 465 VAL A 117 REMARK 465 ASP A 118 REMARK 465 GLU A 119 REMARK 465 CYS A 120 REMARK 465 GLN A 121 REMARK 465 GLN A 122 REMARK 465 ASN A 123 REMARK 465 PRO A 124 REMARK 465 ARG A 125 REMARK 465 LEU A 126 REMARK 465 CYS A 127 REMARK 465 LYS A 128 REMARK 465 SER A 129 REMARK 465 TYR A 130 REMARK 465 GLY A 131 REMARK 465 THR A 132 REMARK 465 CYS A 133 REMARK 465 VAL A 134 REMARK 465 ASN A 135 REMARK 465 THR A 136 REMARK 465 LEU A 137 REMARK 465 GLY A 138 REMARK 465 SER A 139 REMARK 465 TYR A 140 REMARK 465 THR A 141 REMARK 465 CYS A 142 REMARK 465 GLN A 143 REMARK 465 CYS A 144 REMARK 465 LEU A 145 REMARK 465 PRO A 146 REMARK 465 GLY A 147 REMARK 465 PHE A 148 REMARK 465 LYS A 149 REMARK 465 PHE A 150 REMARK 465 ILE A 151 REMARK 465 PRO A 152 REMARK 465 GLU A 153 REMARK 465 ASP A 154 REMARK 465 PRO A 155 REMARK 465 LYS A 156 REMARK 465 VAL A 157 REMARK 465 CYS A 158 REMARK 465 THR A 159 REMARK 465 ASP A 160 REMARK 465 VAL A 161 REMARK 465 ASN A 162 REMARK 465 GLU A 163 REMARK 465 CYS A 164 REMARK 465 THR A 165 REMARK 465 SER A 166 REMARK 465 GLY A 167 REMARK 465 GLN A 168 REMARK 465 ASN A 169 REMARK 465 PRO A 170 REMARK 465 CYS A 171 REMARK 465 HIS A 172 REMARK 465 SER A 173 REMARK 465 SER A 174 REMARK 465 THR A 175 REMARK 465 HIS A 176 REMARK 465 CYS A 177 REMARK 465 LEU A 178 REMARK 465 ASN A 179 REMARK 465 ASN A 180 REMARK 465 VAL A 181 REMARK 465 GLY A 182 REMARK 465 SER A 183 REMARK 465 TYR A 184 REMARK 465 GLN A 185 REMARK 465 CYS A 186 REMARK 465 ARG A 187 REMARK 465 CYS A 188 REMARK 465 ARG A 189 REMARK 465 PRO A 190 REMARK 465 GLY A 191 REMARK 465 TRP A 192 REMARK 465 GLN A 193 REMARK 465 PRO A 194 REMARK 465 ILE A 195 REMARK 465 PRO A 196 REMARK 465 GLY A 197 REMARK 465 SER A 198 REMARK 465 PRO A 199 REMARK 465 ASN A 200 REMARK 465 GLY A 201 REMARK 465 PRO A 202 REMARK 465 ASN A 203 REMARK 465 ASN A 204 REMARK 465 THR A 205 REMARK 465 VAL A 206 REMARK 465 CYS A 207 REMARK 465 GLU A 208 REMARK 465 ASP A 209 REMARK 465 VAL A 210 REMARK 465 ASP A 211 REMARK 465 GLU A 212 REMARK 465 CYS A 213 REMARK 465 SER A 214 REMARK 465 SER A 215 REMARK 465 GLY A 216 REMARK 465 GLN A 217 REMARK 465 HIS A 218 REMARK 465 GLN A 219 REMARK 465 CYS A 220 REMARK 465 ASP A 221 REMARK 465 SER A 222 REMARK 465 SER A 223 REMARK 465 THR A 224 REMARK 465 VAL A 225 REMARK 465 CYS A 226 REMARK 465 PHE A 227 REMARK 465 ASN A 228 REMARK 465 THR A 229 REMARK 465 VAL A 230 REMARK 465 GLY A 231 REMARK 465 SER A 232 REMARK 465 TYR A 233 REMARK 465 SER A 234 REMARK 465 CYS A 235 REMARK 465 ARG A 236 REMARK 465 CYS A 237 REMARK 465 ARG A 238 REMARK 465 PRO A 239 REMARK 465 GLY A 240 REMARK 465 TRP A 241 REMARK 465 LYS A 242 REMARK 465 PRO A 243 REMARK 465 ARG A 244 REMARK 465 HIS A 245 REMARK 465 GLY A 246 REMARK 465 ILE A 247 REMARK 465 PRO A 248 REMARK 465 ASN A 249 REMARK 465 ASN A 250 REMARK 465 GLN A 251 REMARK 465 LYS A 252 REMARK 465 ASP A 253 REMARK 465 THR A 254 REMARK 465 VAL A 255 REMARK 465 ALA A 391 REMARK 465 GLU A 392 REMARK 465 ASP A 393 REMARK 465 PRO A 394 REMARK 465 LYS A 422 REMARK 465 GLN A 423 REMARK 465 ALA A 424 REMARK 465 GLU A 425 REMARK 465 LEU A 426 REMARK 465 GLU A 427 REMARK 465 GLU A 428 REMARK 465 ILE A 429 REMARK 465 TYR A 430 REMARK 465 GLU A 431 REMARK 465 SER A 432 REMARK 465 SER A 433 REMARK 465 ILE A 434 REMARK 465 SER A 471 REMARK 465 SER A 472 REMARK 465 ASP A 473 REMARK 465 GLY A 474 REMARK 465 GLU A 475 REMARK 465 ALA A 476 REMARK 465 GLY A 477 REMARK 465 ARG A 478 REMARK 465 ASP A 479 REMARK 465 PRO A 480 REMARK 465 PRO A 481 REMARK 465 ALA A 482 REMARK 465 LYS A 483 REMARK 465 ASP A 484 REMARK 465 VAL A 485 REMARK 465 MET A 486 REMARK 465 PRO A 487 REMARK 465 GLY A 488 REMARK 465 PRO A 489 REMARK 465 ARG A 490 REMARK 465 ASP A 501 REMARK 465 SER A 502 REMARK 465 ASP A 503 REMARK 465 ASP A 541 REMARK 465 VAL A 542 REMARK 465 GLU A 543 REMARK 465 ASP A 544 REMARK 465 TRP A 545 REMARK 465 LYS A 546 REMARK 465 LEU A 547 REMARK 465 THR A 548 REMARK 465 LEU A 549 REMARK 465 ILE A 550 REMARK 465 THR A 551 REMARK 465 ARG A 552 REMARK 465 SER A 553 REMARK 465 SER A 554 REMARK 465 SER A 555 REMARK 465 SER A 556 REMARK 465 HIS A 557 REMARK 465 HIS A 558 REMARK 465 HIS A 559 REMARK 465 HIS A 560 REMARK 465 HIS A 561 REMARK 465 HIS A 562 REMARK 465 GLU D 1 REMARK 465 ILE D 2 REMARK 465 SER D 3 REMARK 465 LYS D 136 REMARK 465 GLY D 137 REMARK 465 PRO D 138 REMARK 465 SER D 139 REMARK 465 VAL D 140 REMARK 465 PHE D 141 REMARK 465 PRO D 142 REMARK 465 LEU D 143 REMARK 465 ALA D 144 REMARK 465 PRO D 145 REMARK 465 SER D 146 REMARK 465 SER D 147 REMARK 465 LYS D 148 REMARK 465 SER D 149 REMARK 465 THR D 150 REMARK 465 SER D 151 REMARK 465 GLY D 152 REMARK 465 GLY D 153 REMARK 465 THR D 154 REMARK 465 ALA D 155 REMARK 465 ALA D 156 REMARK 465 LEU D 157 REMARK 465 GLY D 158 REMARK 465 CYS D 159 REMARK 465 LEU D 160 REMARK 465 VAL D 161 REMARK 465 LYS D 162 REMARK 465 ASP D 163 REMARK 465 TYR D 164 REMARK 465 PHE D 165 REMARK 465 PRO D 166 REMARK 465 GLU D 167 REMARK 465 PRO D 168 REMARK 465 VAL D 169 REMARK 465 THR D 170 REMARK 465 VAL D 171 REMARK 465 SER D 172 REMARK 465 TRP D 173 REMARK 465 ASN D 174 REMARK 465 SER D 175 REMARK 465 GLY D 176 REMARK 465 ALA D 177 REMARK 465 LEU D 178 REMARK 465 THR D 179 REMARK 465 SER D 180 REMARK 465 GLY D 181 REMARK 465 VAL D 182 REMARK 465 HIS D 183 REMARK 465 THR D 184 REMARK 465 PHE D 185 REMARK 465 PRO D 186 REMARK 465 ALA D 187 REMARK 465 VAL D 188 REMARK 465 LEU D 189 REMARK 465 GLN D 190 REMARK 465 SER D 191 REMARK 465 SER D 192 REMARK 465 GLY D 193 REMARK 465 LEU D 194 REMARK 465 TYR D 195 REMARK 465 SER D 196 REMARK 465 LEU D 197 REMARK 465 SER D 198 REMARK 465 SER D 199 REMARK 465 VAL D 200 REMARK 465 VAL D 201 REMARK 465 THR D 202 REMARK 465 VAL D 203 REMARK 465 PRO D 204 REMARK 465 SER D 205 REMARK 465 SER D 206 REMARK 465 SER D 207 REMARK 465 LEU D 208 REMARK 465 GLY D 209 REMARK 465 THR D 210 REMARK 465 GLN D 211 REMARK 465 THR D 212 REMARK 465 TYR D 213 REMARK 465 ILE D 214 REMARK 465 CYS D 215 REMARK 465 ASN D 216 REMARK 465 VAL D 217 REMARK 465 ASN D 218 REMARK 465 HIS D 219 REMARK 465 LYS D 220 REMARK 465 PRO D 221 REMARK 465 SER D 222 REMARK 465 ASN D 223 REMARK 465 THR D 224 REMARK 465 LYS D 225 REMARK 465 VAL D 226 REMARK 465 ASP D 227 REMARK 465 LYS D 228 REMARK 465 LYS D 229 REMARK 465 VAL D 230 REMARK 465 GLU D 231 REMARK 465 PRO D 232 REMARK 465 LYS D 233 REMARK 465 SER D 234 REMARK 465 CYS D 235 REMARK 465 ASP D 236 REMARK 465 LYS D 237 REMARK 465 THR D 238 REMARK 465 HIS D 239 REMARK 465 THR D 240 REMARK 465 ARG E 108 REMARK 465 THR E 109 REMARK 465 VAL E 110 REMARK 465 ALA E 111 REMARK 465 ALA E 112 REMARK 465 PRO E 113 REMARK 465 SER E 114 REMARK 465 VAL E 115 REMARK 465 PHE E 116 REMARK 465 ILE E 117 REMARK 465 PHE E 118 REMARK 465 PRO E 119 REMARK 465 PRO E 120 REMARK 465 SER E 121 REMARK 465 ASP E 122 REMARK 465 SER E 123 REMARK 465 GLN E 124 REMARK 465 LEU E 125 REMARK 465 LYS E 126 REMARK 465 SER E 127 REMARK 465 GLY E 128 REMARK 465 THR E 129 REMARK 465 ALA E 130 REMARK 465 SER E 131 REMARK 465 VAL E 132 REMARK 465 VAL E 133 REMARK 465 CYS E 134 REMARK 465 LEU E 135 REMARK 465 LEU E 136 REMARK 465 ASN E 137 REMARK 465 ASN E 138 REMARK 465 PHE E 139 REMARK 465 TYR E 140 REMARK 465 PRO E 141 REMARK 465 ARG E 142 REMARK 465 GLU E 143 REMARK 465 ALA E 144 REMARK 465 LYS E 145 REMARK 465 VAL E 146 REMARK 465 GLN E 147 REMARK 465 TRP E 148 REMARK 465 LYS E 149 REMARK 465 VAL E 150 REMARK 465 ASP E 151 REMARK 465 ASN E 152 REMARK 465 ALA E 153 REMARK 465 LEU E 154 REMARK 465 GLN E 155 REMARK 465 SER E 156 REMARK 465 GLY E 157 REMARK 465 ASN E 158 REMARK 465 SER E 159 REMARK 465 GLN E 160 REMARK 465 GLU E 161 REMARK 465 SER E 162 REMARK 465 VAL E 163 REMARK 465 THR E 164 REMARK 465 GLU E 165 REMARK 465 GLN E 166 REMARK 465 ASP E 167 REMARK 465 SER E 168 REMARK 465 LYS E 169 REMARK 465 ASP E 170 REMARK 465 SER E 171 REMARK 465 THR E 172 REMARK 465 TYR E 173 REMARK 465 SER E 174 REMARK 465 LEU E 175 REMARK 465 SER E 176 REMARK 465 SER E 177 REMARK 465 THR E 178 REMARK 465 LEU E 179 REMARK 465 THR E 180 REMARK 465 LEU E 181 REMARK 465 SER E 182 REMARK 465 LYS E 183 REMARK 465 ALA E 184 REMARK 465 ASP E 185 REMARK 465 TYR E 186 REMARK 465 GLU E 187 REMARK 465 LYS E 188 REMARK 465 HIS E 189 REMARK 465 LYS E 190 REMARK 465 VAL E 191 REMARK 465 TYR E 192 REMARK 465 ALA E 193 REMARK 465 CYS E 194 REMARK 465 GLU E 195 REMARK 465 VAL E 196 REMARK 465 THR E 197 REMARK 465 HIS E 198 REMARK 465 GLN E 199 REMARK 465 GLY E 200 REMARK 465 LEU E 201 REMARK 465 SER E 202 REMARK 465 SER E 203 REMARK 465 PRO E 204 REMARK 465 VAL E 205 REMARK 465 THR E 206 REMARK 465 LYS E 207 REMARK 465 SER E 208 REMARK 465 PHE E 209 REMARK 465 ASN E 210 REMARK 465 ARG E 211 REMARK 465 GLY E 212 REMARK 465 GLU E 213 REMARK 465 CYS E 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 257 32.02 -93.15 REMARK 500 ASP A 258 18.62 52.71 REMARK 500 ASP A 288 51.65 -94.15 REMARK 500 SER A 292 -70.88 -82.39 REMARK 500 SER A 293 154.67 178.78 REMARK 500 HIS A 419 -3.58 68.16 REMARK 500 SER A 467 -168.06 -125.58 REMARK 500 HIS A 468 -5.71 75.69 REMARK 500 SER D 33 1.28 -68.92 REMARK 500 VAL D 51 -54.16 -124.51 REMARK 500 SER D 88 51.56 37.02 REMARK 500 ALA D 95 -174.85 -170.28 REMARK 500 SER E 9 -7.11 73.85 REMARK 500 GLN E 27 -132.45 53.49 REMARK 500 ALA E 51 -10.13 72.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-48537 RELATED DB: EMDB REMARK 900 A8 FAB IN COMPLEX WITH CD97 DBREF 9MQR A 21 552 UNP P48960 AGRE5_HUMAN 21 552 DBREF 9MQR D 1 240 PDB 9MQR 9MQR 1 240 DBREF 9MQR E 1 214 PDB 9MQR 9MQR 1 214 SEQADV 9MQR ALA A 531 UNP P48960 SER 531 ENGINEERED MUTATION SEQADV 9MQR SER A 553 UNP P48960 EXPRESSION TAG SEQADV 9MQR SER A 554 UNP P48960 EXPRESSION TAG SEQADV 9MQR SER A 555 UNP P48960 EXPRESSION TAG SEQADV 9MQR SER A 556 UNP P48960 EXPRESSION TAG SEQADV 9MQR HIS A 557 UNP P48960 EXPRESSION TAG SEQADV 9MQR HIS A 558 UNP P48960 EXPRESSION TAG SEQADV 9MQR HIS A 559 UNP P48960 EXPRESSION TAG SEQADV 9MQR HIS A 560 UNP P48960 EXPRESSION TAG SEQADV 9MQR HIS A 561 UNP P48960 EXPRESSION TAG SEQADV 9MQR HIS A 562 UNP P48960 EXPRESSION TAG SEQRES 1 A 542 GLN ASP SER ARG GLY CYS ALA ARG TRP CYS PRO GLN ASN SEQRES 2 A 542 SER SER CYS VAL ASN ALA THR ALA CYS ARG CYS ASN PRO SEQRES 3 A 542 GLY PHE SER SER PHE SER GLU ILE ILE THR THR PRO THR SEQRES 4 A 542 GLU THR CYS ASP ASP ILE ASN GLU CYS ALA THR PRO SER SEQRES 5 A 542 LYS VAL SER CYS GLY LYS PHE SER ASP CYS TRP ASN THR SEQRES 6 A 542 GLU GLY SER TYR ASP CYS VAL CYS SER PRO GLY TYR GLU SEQRES 7 A 542 PRO VAL SER GLY ALA LYS THR PHE LYS ASN GLU SER GLU SEQRES 8 A 542 ASN THR CYS GLN ASP VAL ASP GLU CYS GLN GLN ASN PRO SEQRES 9 A 542 ARG LEU CYS LYS SER TYR GLY THR CYS VAL ASN THR LEU SEQRES 10 A 542 GLY SER TYR THR CYS GLN CYS LEU PRO GLY PHE LYS PHE SEQRES 11 A 542 ILE PRO GLU ASP PRO LYS VAL CYS THR ASP VAL ASN GLU SEQRES 12 A 542 CYS THR SER GLY GLN ASN PRO CYS HIS SER SER THR HIS SEQRES 13 A 542 CYS LEU ASN ASN VAL GLY SER TYR GLN CYS ARG CYS ARG SEQRES 14 A 542 PRO GLY TRP GLN PRO ILE PRO GLY SER PRO ASN GLY PRO SEQRES 15 A 542 ASN ASN THR VAL CYS GLU ASP VAL ASP GLU CYS SER SER SEQRES 16 A 542 GLY GLN HIS GLN CYS ASP SER SER THR VAL CYS PHE ASN SEQRES 17 A 542 THR VAL GLY SER TYR SER CYS ARG CYS ARG PRO GLY TRP SEQRES 18 A 542 LYS PRO ARG HIS GLY ILE PRO ASN ASN GLN LYS ASP THR SEQRES 19 A 542 VAL CYS GLU ASP MET THR PHE SER THR TRP THR PRO PRO SEQRES 20 A 542 PRO GLY VAL HIS SER GLN THR LEU SER ARG PHE PHE ASP SEQRES 21 A 542 LYS VAL GLN ASP LEU GLY ARG ASP SER LYS THR SER SER SEQRES 22 A 542 ALA GLU VAL THR ILE GLN ASN VAL ILE LYS LEU VAL ASP SEQRES 23 A 542 GLU LEU MET GLU ALA PRO GLY ASP VAL GLU ALA LEU ALA SEQRES 24 A 542 PRO PRO VAL ARG HIS LEU ILE ALA THR GLN LEU LEU SER SEQRES 25 A 542 ASN LEU GLU ASP ILE MET ARG ILE LEU ALA LYS SER LEU SEQRES 26 A 542 PRO LYS GLY PRO PHE THR TYR ILE SER PRO SER ASN THR SEQRES 27 A 542 GLU LEU THR LEU MET ILE GLN GLU ARG GLY ASP LYS ASN SEQRES 28 A 542 VAL THR MET GLY GLN SER SER ALA ARG MET LYS LEU ASN SEQRES 29 A 542 TRP ALA VAL ALA ALA GLY ALA GLU ASP PRO GLY PRO ALA SEQRES 30 A 542 VAL ALA GLY ILE LEU SER ILE GLN ASN MET THR THR LEU SEQRES 31 A 542 LEU ALA ASN ALA SER LEU ASN LEU HIS SER LYS LYS GLN SEQRES 32 A 542 ALA GLU LEU GLU GLU ILE TYR GLU SER SER ILE ARG GLY SEQRES 33 A 542 VAL GLN LEU ARG ARG LEU SER ALA VAL ASN SER ILE PHE SEQRES 34 A 542 LEU SER HIS ASN ASN THR LYS GLU LEU ASN SER PRO ILE SEQRES 35 A 542 LEU PHE ALA PHE SER HIS LEU GLU SER SER ASP GLY GLU SEQRES 36 A 542 ALA GLY ARG ASP PRO PRO ALA LYS ASP VAL MET PRO GLY SEQRES 37 A 542 PRO ARG GLN GLU LEU LEU CYS ALA PHE TRP LYS SER ASP SEQRES 38 A 542 SER ASP ARG GLY GLY HIS TRP ALA THR GLU GLY CYS GLN SEQRES 39 A 542 VAL LEU GLY SER LYS ASN GLY SER THR THR CYS GLN CYS SEQRES 40 A 542 SER HIS LEU ALA SER PHE ALA ILE LEU MET ALA HIS TYR SEQRES 41 A 542 ASP VAL GLU ASP TRP LYS LEU THR LEU ILE THR ARG SER SEQRES 42 A 542 SER SER SER HIS HIS HIS HIS HIS HIS SEQRES 1 D 240 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 D 240 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 D 240 ALA SER GLY PHE THR ILE SER SER TYR SER ILE HIS TRP SEQRES 4 D 240 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 D 240 SER ILE SER PRO TYR TYR GLY SER THR SER TYR ALA ASP SEQRES 6 D 240 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 D 240 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 D 240 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG SER TRP TYR SEQRES 9 D 240 TYR TYR GLU GLN ASN PRO TYR TRP TYR GLN LYS GLU GLU SEQRES 10 D 240 GLN ALA LEU ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 11 D 240 VAL PHE ASN GLN ILE LYS GLY PRO SER VAL PHE PRO LEU SEQRES 12 D 240 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 13 D 240 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 14 D 240 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 15 D 240 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 16 D 240 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 17 D 240 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 18 D 240 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 19 D 240 CYS ASP LYS THR HIS THR SEQRES 1 E 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 E 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 E 214 GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 E 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 E 214 SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 E 214 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 E 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 E 214 VAL TYR SER PRO VAL THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 E 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 E 214 PHE PRO PRO SER ASP SER GLN LEU LYS SER GLY THR ALA SEQRES 11 E 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 E 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 E 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 E 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 E 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 E 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 E 214 PHE ASN ARG GLY GLU CYS HELIX 1 AA1 THR A 274 ASP A 288 1 15 HELIX 2 AA2 SER A 293 ALA A 311 1 19 HELIX 3 AA3 GLY A 313 LEU A 318 5 6 HELIX 4 AA4 ALA A 319 LYS A 343 1 25 HELIX 5 AA5 MET A 407 ALA A 412 1 6 HELIX 6 AA6 THR D 31 TYR D 35 5 5 HELIX 7 AA7 ARG D 90 THR D 94 5 5 HELIX 8 AA8 TYR D 104 GLN D 108 5 5 SHEET 1 AA1 8 GLY A 348 ILE A 353 0 SHEET 2 AA1 8 GLU A 359 ILE A 364 -1 O ILE A 364 N GLY A 348 SHEET 3 AA1 8 ALA A 399 ILE A 404 -1 O SER A 403 N GLU A 359 SHEET 4 AA1 8 VAL A 445 LEU A 450 -1 O SER A 447 N LEU A 402 SHEET 5 AA1 8 SER A 532 HIS A 539 -1 O PHE A 533 N ASN A 446 SHEET 6 AA1 8 LEU A 493 LYS A 499 -1 N ALA A 496 O ALA A 534 SHEET 7 AA1 8 HIS A 507 ALA A 509 -1 O ALA A 509 N PHE A 497 SHEET 8 AA1 8 LEU A 416 ASN A 417 1 N ASN A 417 O TRP A 508 SHEET 1 AA2 6 GLY A 348 ILE A 353 0 SHEET 2 AA2 6 GLU A 359 ILE A 364 -1 O ILE A 364 N GLY A 348 SHEET 3 AA2 6 ALA A 399 ILE A 404 -1 O SER A 403 N GLU A 359 SHEET 4 AA2 6 VAL A 445 LEU A 450 -1 O SER A 447 N LEU A 402 SHEET 5 AA2 6 SER A 532 HIS A 539 -1 O PHE A 533 N ASN A 446 SHEET 6 AA2 6 GLN A 438 ARG A 441 -1 N GLN A 438 O HIS A 539 SHEET 1 AA3 8 CYS A 513 SER A 518 0 SHEET 2 AA3 8 SER A 522 CYS A 527 -1 O GLN A 526 N GLN A 514 SHEET 3 AA3 8 ILE A 462 SER A 467 -1 N PHE A 464 O CYS A 525 SHEET 4 AA3 8 ARG A 380 ASN A 384 -1 N LYS A 382 O LEU A 463 SHEET 5 AA3 8 ASN A 371 GLY A 375 -1 N MET A 374 O MET A 381 SHEET 6 AA3 8 PHE E 62 SER E 67 -1 O ARG E 66 N THR A 373 SHEET 7 AA3 8 PHE E 71 ILE E 75 -1 O THR E 74 N SER E 63 SHEET 8 AA3 8 VAL E 19 THR E 22 -1 N ILE E 21 O LEU E 73 SHEET 1 AA4 4 GLN D 6 SER D 10 0 SHEET 2 AA4 4 LEU D 21 SER D 28 -1 O SER D 28 N GLN D 6 SHEET 3 AA4 4 THR D 81 MET D 86 -1 O ALA D 82 N CYS D 25 SHEET 4 AA4 4 ALA D 75 ASP D 76 -1 N ASP D 76 O THR D 81 SHEET 1 AA5 6 LEU D 14 VAL D 15 0 SHEET 2 AA5 6 THR D 127 VAL D 131 1 O THR D 130 N VAL D 15 SHEET 3 AA5 6 ALA D 95 CYS D 99 -1 N TYR D 97 O THR D 127 SHEET 4 AA5 6 TRP D 39 GLN D 42 -1 N VAL D 40 O TYR D 98 SHEET 5 AA5 6 LEU D 48 SER D 55 -1 O GLU D 49 N ARG D 41 SHEET 6 AA5 6 GLY D 59 TYR D 63 -1 O GLY D 59 N SER D 55 SHEET 1 AA6 2 ARG D 101 TRP D 103 0 SHEET 2 AA6 2 ALA D 119 TYR D 122 -1 O ALA D 119 N TRP D 103 SHEET 1 AA7 6 SER E 10 ALA E 13 0 SHEET 2 AA7 6 THR E 102 ILE E 106 1 O LYS E 103 N LEU E 11 SHEET 3 AA7 6 THR E 85 GLN E 90 -1 N TYR E 86 O THR E 102 SHEET 4 AA7 6 VAL E 33 GLN E 38 -1 N GLN E 38 O THR E 85 SHEET 5 AA7 6 LYS E 45 TYR E 49 -1 O LEU E 47 N TRP E 35 SHEET 6 AA7 6 SER E 53 LEU E 54 -1 O SER E 53 N TYR E 49 SHEET 1 AA8 4 SER E 10 ALA E 13 0 SHEET 2 AA8 4 THR E 102 ILE E 106 1 O LYS E 103 N LEU E 11 SHEET 3 AA8 4 THR E 85 GLN E 90 -1 N TYR E 86 O THR E 102 SHEET 4 AA8 4 THR E 97 PHE E 98 -1 O THR E 97 N GLN E 90 SSBOND 1 CYS A 495 CYS A 525 1555 1555 2.03 SSBOND 2 CYS A 513 CYS A 527 1555 1555 2.03 SSBOND 3 CYS D 25 CYS D 99 1555 1555 2.03 SSBOND 4 CYS E 23 CYS E 88 1555 1555 2.03 CISPEP 1 SER E 7 PRO E 8 0 -2.35 CISPEP 2 SER E 94 PRO E 95 0 0.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 1876 TYR A 540 TER 2923 ILE D 135 TER 3732 LYS E 107 CONECT 1558 1758 CONECT 1677 1773 CONECT 1758 1558 CONECT 1773 1677 CONECT 2027 2598 CONECT 2598 2027 CONECT 3087 3584 CONECT 3584 3087 MASTER 661 0 0 8 44 0 0 6 3729 3 8 78 END