HEADER ELECTRON TRANSPORT 10-JAN-25 9MT1 TITLE 1.53 A CRYSTAL STRUCTURE OF HOUSEFLY CYTOCHROME C AT PH 6.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUSCA DOMESTICA; SOURCE 3 ORGANISM_COMMON: HOUSE FLY; SOURCE 4 ORGANISM_TAXID: 7370; SOURCE 5 ORGAN: THORAX; SOURCE 6 TISSUE: WING MUSCLE KEYWDS ELECTRON TRANSPORT, METALLOPROTEINS, INSECT, PROTOSTOME, CYTOCHROME C EXPDTA X-RAY DIFFRACTION AUTHOR L.ZAFREEN,L.-S.HUANG,P.LUEMMEN,E.A.BERRY REVDAT 1 12-FEB-25 9MT1 0 JRNL AUTH L.ZAFREEN,L.-S.HUANG,P.LUEMMEN,E.A.BERRY JRNL TITL CRYSTAL STRUCTURE OF INSECT CYTOCHROME C AT DIFFERENT PH JRNL TITL 2 VALUES. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3150 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 36219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 1706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1900 - 3.2100 0.99 3216 177 0.1521 0.1757 REMARK 3 2 3.2100 - 2.5500 0.96 2990 175 0.1472 0.1646 REMARK 3 3 2.5500 - 2.2300 0.94 2960 138 0.1413 0.1726 REMARK 3 4 2.2300 - 2.0300 0.94 2935 150 0.1381 0.1625 REMARK 3 5 2.0300 - 1.8800 0.95 2928 176 0.1532 0.1954 REMARK 3 6 1.8800 - 1.7700 0.96 3001 137 0.1504 0.2048 REMARK 3 7 1.7700 - 1.6800 0.97 2987 158 0.1532 0.1980 REMARK 3 8 1.6800 - 1.6100 0.97 2981 170 0.1680 0.1701 REMARK 3 9 1.6100 - 1.5500 0.97 2991 139 0.1887 0.2353 REMARK 3 10 1.5500 - 1.4900 0.95 2966 152 0.2211 0.2769 REMARK 3 11 1.4900 - 1.4500 0.87 2773 79 0.2692 0.3058 REMARK 3 12 1.4500 - 1.4050 0.57 1785 55 0.3375 0.3239 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.145 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1856 REMARK 3 ANGLE : 1.110 2530 REMARK 3 CHIRALITY : 0.078 245 REMARK 3 PLANARITY : 0.014 323 REMARK 3 DIHEDRAL : 13.402 682 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -3 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7943 -22.3595 15.6084 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.0689 REMARK 3 T33: 0.1256 T12: 0.0134 REMARK 3 T13: 0.0065 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.2521 L22: 0.1047 REMARK 3 L33: 0.1078 L12: 0.0340 REMARK 3 L13: 0.0249 L23: 0.0464 REMARK 3 S TENSOR REMARK 3 S11: -0.0441 S12: -0.0579 S13: -0.1898 REMARK 3 S21: 0.0883 S22: -0.0518 S23: -0.0219 REMARK 3 S31: 0.1556 S32: -0.0027 S33: -0.0008 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2724 -11.2098 14.0836 REMARK 3 T TENSOR REMARK 3 T11: 0.0696 T22: 0.0545 REMARK 3 T33: 0.1166 T12: -0.0003 REMARK 3 T13: 0.0036 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.8585 L22: 0.9567 REMARK 3 L33: 0.0174 L12: 0.1734 REMARK 3 L13: 0.0935 L23: -0.0615 REMARK 3 S TENSOR REMARK 3 S11: -0.0586 S12: -0.1284 S13: 0.0569 REMARK 3 S21: 0.1273 S22: -0.0082 S23: 0.1944 REMARK 3 S31: 0.0009 S32: -0.0802 S33: 0.0100 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1200 -6.9331 4.5856 REMARK 3 T TENSOR REMARK 3 T11: 0.0967 T22: 0.0966 REMARK 3 T33: 0.1405 T12: -0.0028 REMARK 3 T13: -0.0194 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.0196 L22: 0.2009 REMARK 3 L33: 0.3878 L12: -0.0629 REMARK 3 L13: -0.0874 L23: 0.2791 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0842 S13: 0.0290 REMARK 3 S21: -0.1723 S22: -0.0692 S23: 0.1617 REMARK 3 S31: -0.1089 S32: -0.1654 S33: -0.0095 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0572 -8.8125 4.9969 REMARK 3 T TENSOR REMARK 3 T11: 0.0902 T22: 0.0578 REMARK 3 T33: 0.1052 T12: 0.0028 REMARK 3 T13: -0.0036 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.0930 L22: 0.0612 REMARK 3 L33: 0.1562 L12: 0.0225 REMARK 3 L13: 0.0503 L23: 0.0608 REMARK 3 S TENSOR REMARK 3 S11: 0.0104 S12: 0.0687 S13: 0.0128 REMARK 3 S21: -0.0899 S22: 0.0233 S23: -0.0188 REMARK 3 S31: -0.0489 S32: 0.0142 S33: 0.0121 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1231 -4.8227 10.7728 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.0846 REMARK 3 T33: 0.1042 T12: -0.0188 REMARK 3 T13: -0.0012 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.0271 L22: 0.0195 REMARK 3 L33: 0.0641 L12: -0.0164 REMARK 3 L13: -0.0269 L23: -0.0026 REMARK 3 S TENSOR REMARK 3 S11: 0.0384 S12: -0.0064 S13: -0.0224 REMARK 3 S21: 0.0686 S22: -0.0100 S23: -0.1544 REMARK 3 S31: -0.0613 S32: -0.0251 S33: 0.0005 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6912 -6.2652 15.4952 REMARK 3 T TENSOR REMARK 3 T11: 0.0949 T22: 0.0729 REMARK 3 T33: 0.1128 T12: 0.0101 REMARK 3 T13: -0.0042 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.2441 L22: 0.1650 REMARK 3 L33: 0.0865 L12: 0.0036 REMARK 3 L13: 0.0663 L23: 0.1073 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.1574 S13: 0.0149 REMARK 3 S21: 0.1270 S22: 0.0487 S23: 0.0056 REMARK 3 S31: 0.1495 S32: 0.0599 S33: 0.0285 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4946 -21.0656 10.8726 REMARK 3 T TENSOR REMARK 3 T11: 0.0723 T22: 0.0414 REMARK 3 T33: 0.0984 T12: 0.0071 REMARK 3 T13: -0.0091 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.9677 L22: 0.0501 REMARK 3 L33: 0.0823 L12: 0.2122 REMARK 3 L13: -0.0363 L23: -0.0244 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: 0.0942 S13: 0.0224 REMARK 3 S21: -0.0050 S22: 0.0353 S23: 0.0188 REMARK 3 S31: 0.0611 S32: -0.0131 S33: -0.0073 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -3 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2181 -15.7610 31.7553 REMARK 3 T TENSOR REMARK 3 T11: 0.1729 T22: 0.2607 REMARK 3 T33: 0.1349 T12: 0.0216 REMARK 3 T13: 0.0309 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.6097 L22: 0.1796 REMARK 3 L33: 0.2661 L12: -0.2788 REMARK 3 L13: -0.0748 L23: -0.0328 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: -0.0524 S13: 0.2130 REMARK 3 S21: 0.1759 S22: -0.0474 S23: 0.1243 REMARK 3 S31: 0.0617 S32: -0.3646 S33: -0.0677 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4145 -20.1088 34.2254 REMARK 3 T TENSOR REMARK 3 T11: 0.1463 T22: 0.1725 REMARK 3 T33: 0.1148 T12: 0.0736 REMARK 3 T13: 0.0105 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.1701 L22: 0.0843 REMARK 3 L33: 0.2294 L12: 0.1196 REMARK 3 L13: 0.1975 L23: 0.1392 REMARK 3 S TENSOR REMARK 3 S11: -0.0768 S12: 0.0608 S13: -0.1100 REMARK 3 S21: 0.0180 S22: 0.0400 S23: -0.0107 REMARK 3 S31: 0.0745 S32: 0.1559 S33: -0.0093 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9330 -16.2713 44.6942 REMARK 3 T TENSOR REMARK 3 T11: 0.2176 T22: 0.2440 REMARK 3 T33: 0.1397 T12: 0.0740 REMARK 3 T13: -0.0142 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 0.0176 L22: 0.0613 REMARK 3 L33: 0.0133 L12: 0.0328 REMARK 3 L13: 0.0128 L23: 0.0253 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: -0.2306 S13: -0.1268 REMARK 3 S21: 0.2901 S22: 0.0347 S23: -0.1263 REMARK 3 S31: 0.1441 S32: 0.1145 S33: -0.0005 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8404 -9.4406 46.7004 REMARK 3 T TENSOR REMARK 3 T11: 0.1319 T22: 0.1967 REMARK 3 T33: 0.0466 T12: 0.0031 REMARK 3 T13: -0.0092 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.0670 L22: 0.1115 REMARK 3 L33: 0.0379 L12: 0.0549 REMARK 3 L13: 0.0125 L23: -0.0347 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: -0.0252 S13: -0.0091 REMARK 3 S21: 0.0875 S22: 0.0129 S23: -0.0087 REMARK 3 S31: -0.0171 S32: 0.0092 S33: 0.2553 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7910 -5.1461 38.3079 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.1738 REMARK 3 T33: 0.1326 T12: 0.0537 REMARK 3 T13: 0.0331 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.0921 L22: 0.0506 REMARK 3 L33: 0.0773 L12: 0.0112 REMARK 3 L13: 0.0256 L23: 0.0595 REMARK 3 S TENSOR REMARK 3 S11: 0.1482 S12: 0.0830 S13: 0.0996 REMARK 3 S21: 0.0394 S22: -0.0078 S23: 0.0759 REMARK 3 S31: -0.1326 S32: -0.0740 S33: 0.0080 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2097 -15.7216 37.2724 REMARK 3 T TENSOR REMARK 3 T11: 0.2219 T22: 0.2561 REMARK 3 T33: 0.1616 T12: 0.0640 REMARK 3 T13: 0.0318 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 0.0294 L22: 0.0213 REMARK 3 L33: 0.0164 L12: 0.0162 REMARK 3 L13: -0.0156 L23: 0.0015 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: -0.0338 S13: 0.0637 REMARK 3 S21: 0.1290 S22: 0.1103 S23: 0.1394 REMARK 3 S31: -0.0246 S32: -0.2669 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND ((RESID 8 THROUGH 10 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 12 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O )) OR (RESID 14 THROUGH REMARK 3 15 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O )) OR (RESID 17 THROUGH 26 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 28 THROUGH 36 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )))) REMARK 3 SELECTION : (CHAIN 'B' AND ((RESID 8 THROUGH 10 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 12 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O )) OR (RESID 14 THROUGH REMARK 3 15 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O )) OR (RESID 17 THROUGH 26 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 28 THROUGH 36 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND ((RESID 43 THROUGH 49 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 51 THROUGH 52 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )))) REMARK 3 SELECTION : (CHAIN 'A' AND ((RESID 43 THROUGH 49 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 51 THROUGH 52 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND ((RESID 57 THROUGH 59 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 63 THROUGH 68 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )) OR (RESID REMARK 3 70 THROUGH 78 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O )) OR (RESID 80 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 82 THROUGH 85 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )) OR (RESID REMARK 3 88 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O )) OR (RESID 90 THROUGH 96 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 98 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O )))) REMARK 3 SELECTION : (CHAIN 'B' AND ((RESID 57 THROUGH 59 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 63 THROUGH 68 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )) OR (RESID REMARK 3 70 THROUGH 78 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O )) OR (RESID 80 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 82 THROUGH 85 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O )) OR (RESID REMARK 3 88 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O )) OR (RESID 90 THROUGH 96 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O )) REMARK 3 OR (RESID 98 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O )))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MT1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000290325. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.56 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9804 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36225 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.405 REMARK 200 RESOLUTION RANGE LOW (A) : 29.196 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 4.640 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.67 REMARK 200 R MERGE FOR SHELL (I) : 0.69400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN IN 0.5 MM NA-EDTA, 20 MM TRIS REMARK 280 AT PH OF 7.5, WAS MIXED WITH AN EQUAL VOLUME OF PRECIPITANT REMARK 280 CONTAINING 0.1 M BIS-TRIS PH 6.5, 28% W/V POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 2000 AND ALLOWED TO EQUILIBRATE BY VAPOR REMARK 280 DIFFUSION AGAINST THE SAME PRECIPITANT, PH 6.56, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 29.11100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.07600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 29.11100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.07600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA B 203 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 365 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 455 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 463 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 353 O HOH A 428 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 27 -138.68 -115.15 REMARK 500 ASN A 70 89.71 -166.17 REMARK 500 PHE A 82 117.70 -166.88 REMARK 500 PHE A 82 117.70 -163.34 REMARK 500 LYS B 27 -134.71 -122.92 REMARK 500 ASN B 60 -167.90 -162.06 REMARK 500 ASN B 70 85.96 -168.72 REMARK 500 PHE B 82 117.49 -162.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 479 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 480 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B 468 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH B 469 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH B 470 DISTANCE = 6.54 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 18 NE2 REMARK 620 2 HEC A 201 NA 90.0 REMARK 620 3 HEC A 201 NB 89.3 90.8 REMARK 620 4 HEC A 201 NC 91.1 178.9 89.2 REMARK 620 5 HEC A 201 ND 92.2 89.4 178.5 90.6 REMARK 620 6 MET A 80 SD 175.8 85.8 91.1 93.1 87.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 18 NE2 REMARK 620 2 HEC B 201 NA 93.1 REMARK 620 3 HEC B 201 NB 86.9 91.6 REMARK 620 4 HEC B 201 NC 87.7 179.0 87.9 REMARK 620 5 HEC B 201 ND 89.7 88.1 176.5 92.5 REMARK 620 6 MET B 80 SD 175.9 82.8 93.7 96.4 89.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 428 O REMARK 620 2 HOH B 428 O 91.3 REMARK 620 N 1 DBREF1 9MT1 A -3 103 UNP A0A1I8N8V4_MUSDO DBREF2 9MT1 A A0A1I8N8V4 2 108 DBREF1 9MT1 B -3 103 UNP A0A1I8N8V4_MUSDO DBREF2 9MT1 B A0A1I8N8V4 2 108 SEQRES 1 A 107 GLY VAL PRO ALA GLY ASP VAL GLU LYS GLY LYS LYS ILE SEQRES 2 A 107 PHE VAL GLN ARG CYS ALA GLN CYS HIS THR VAL GLU ALA SEQRES 3 A 107 GLY GLY LYS HIS LYS VAL GLY PRO ASN LEU HIS GLY LEU SEQRES 4 A 107 PHE GLY ARG LYS THR GLY GLN ALA ALA GLY PHE ALA TYR SEQRES 5 A 107 THR ASP ALA ASN LYS ALA LYS GLY ILE THR TRP ASN GLU SEQRES 6 A 107 ASP THR LEU PHE GLU TYR LEU GLU ASN PRO LYS LYS TYR SEQRES 7 A 107 ILE PRO GLY THR LYS MET ILE PHE ALA GLY LEU LYS LYS SEQRES 8 A 107 PRO ASN GLU ARG GLY ASP LEU ILE ALA TYR LEU LYS SER SEQRES 9 A 107 ALA THR LYS SEQRES 1 B 107 GLY VAL PRO ALA GLY ASP VAL GLU LYS GLY LYS LYS ILE SEQRES 2 B 107 PHE VAL GLN ARG CYS ALA GLN CYS HIS THR VAL GLU ALA SEQRES 3 B 107 GLY GLY LYS HIS LYS VAL GLY PRO ASN LEU HIS GLY LEU SEQRES 4 B 107 PHE GLY ARG LYS THR GLY GLN ALA ALA GLY PHE ALA TYR SEQRES 5 B 107 THR ASP ALA ASN LYS ALA LYS GLY ILE THR TRP ASN GLU SEQRES 6 B 107 ASP THR LEU PHE GLU TYR LEU GLU ASN PRO LYS LYS TYR SEQRES 7 B 107 ILE PRO GLY THR LYS MET ILE PHE ALA GLY LEU LYS LYS SEQRES 8 B 107 PRO ASN GLU ARG GLY ASP LEU ILE ALA TYR LEU LYS SER SEQRES 9 B 107 ALA THR LYS HET HEC A 201 75 HET MOH A 202 6 HET EOH A 203 9 HET HEC B 201 75 HET EOH B 202 9 HET NA B 203 1 HETNAM HEC HEME C HETNAM MOH METHANOL HETNAM EOH ETHANOL HETNAM NA SODIUM ION FORMUL 3 HEC 2(C34 H34 FE N4 O4) FORMUL 4 MOH C H4 O FORMUL 5 EOH 2(C2 H6 O) FORMUL 8 NA NA 1+ FORMUL 9 HOH *350(H2 O) HELIX 1 AA1 ASP A 2 CYS A 14 1 13 HELIX 2 AA2 THR A 49 LYS A 55 1 7 HELIX 3 AA3 ASN A 60 ASN A 70 1 11 HELIX 4 AA4 ASN A 70 ILE A 75 1 6 HELIX 5 AA5 LYS A 87 THR A 102 1 16 HELIX 6 AA6 ASP B 2 CYS B 14 1 13 HELIX 7 AA7 THR B 49 GLY B 56 1 8 HELIX 8 AA8 ASN B 60 ASN B 70 1 11 HELIX 9 AA9 ASN B 70 ILE B 75 1 6 HELIX 10 AB1 LYS B 87 THR B 102 1 16 LINK SG CYS A 14 CAB HEC A 201 1555 1555 1.81 LINK SG CYS A 17 CAC HEC A 201 1555 1555 1.87 LINK SG CYS B 14 CAB HEC B 201 1555 1555 1.72 LINK SG CYS B 17 CAC HEC B 201 1555 1555 1.84 LINK NE2 HIS A 18 FE HEC A 201 1555 1555 2.01 LINK SD MET A 80 FE HEC A 201 1555 1555 2.29 LINK NE2 HIS B 18 FE HEC B 201 1555 1555 2.03 LINK SD MET B 80 FE HEC B 201 1555 1555 2.30 LINK NA NA B 203 O HOH B 428 1555 1555 3.07 LINK NA NA B 203 O HOH B 428 1555 2556 3.07 CRYST1 58.222 34.152 105.071 90.00 105.04 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017176 0.000000 0.004615 0.00000 SCALE2 0.000000 0.029281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009855 0.00000 MTRIX1 1 -0.482634 0.872490 0.076325 -3.02428 1 MTRIX2 1 0.875098 0.476855 0.082543 -1.48550 1 MTRIX3 1 0.035622 0.106630 -0.993660 50.34811 1 MTRIX1 2 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 2 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 2 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 3 -0.487095 0.870738 0.067484 -2.73934 1 MTRIX2 3 0.871221 0.479064 0.107110 -2.34992 1 MTRIX3 3 0.060936 0.110966 -0.991954 50.63780 1