HEADER ANTIVIRAL PROTEIN 14-JAN-25 9MUO TITLE CRYO-EM STRUCTURE OF CRISPR-ASSOCIATED CA4 BOUND CAT1 PENTAGONAL TITLE 2 FILAMENT ASSEMBLY IN THE PRESENCE OF NAD ANALOG BAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAT1 (CRISPR-ASSOCIATED TIR 1); COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA (5'-R(P*AP*AP*AP*A)-3'); COMPND 7 CHAIN: a, b SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTERIUM; SOURCE 3 ORGANISM_TAXID: 1869227; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: BACTERIUM; SOURCE 8 ORGANISM_TAXID: 1869227 KEYWDS CRISPR, ANTIPHAGE DEFENSE, ADAPTIVE IMMUNITY, FILAMENT, CARF, TIR, KEYWDS 2 CA4, NAD, ADPR, NAM, BAD, ANTIVIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR P.MAJUMDER,D.J.PATEL REVDAT 3 25-JUN-25 9MUO 1 JRNL REVDAT 2 23-APR-25 9MUO 1 JRNL REVDAT 1 16-APR-25 9MUO 0 JRNL AUTH C.F.BACA,P.MAJUMDER,J.H.HICKLING,D.J.PATEL,L.A.MARRAFFINI JRNL TITL CAT1 FORMS FILAMENT NETWORKS TO DEGRADE NAD + DURING THE JRNL TITL 2 TYPE III CRISPR-CAS ANTIVIRAL RESPONSE. JRNL REF SCIENCE V. 388 V9045 2025 JRNL REFN ESSN 1095-9203 JRNL PMID 40208959 JRNL DOI 10.1126/SCIENCE.ADV9045 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : COOT, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 87458 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9MUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000291870. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ANTIVIRAL PROTEIN CAT1 - CYCLIC REMARK 245 TETRA-ADENYLATE COMPLEX NAD REMARK 245 ANALOG BAD WAS ADDED TO THE REMARK 245 SAMPLE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : LIQUID-NITROGEN-COOLED LIQUID REMARK 245 ETHANE WAS USED AS THE CRYOGEN. REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.00 REMARK 245 SAMPLE DETAILS : CAT1 PROTEIN FORMS FILAMENT REMARK 245 STRUCTURE UPON RECOGNITION OF CA4, CYCLIC TETRA-ADENYLATE REMARK 245 LIGAND. NAD ANALOG BAD WAS ADDED TO THE SAMPLE REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2300.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5933.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, a, b, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 34 REMARK 465 GLN A 35 REMARK 465 SER A 36 REMARK 465 ILE A 37 REMARK 465 PRO A 38 REMARK 465 GLY A 39 REMARK 465 GLY A 40 REMARK 465 GLY A 41 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 MET B 1 REMARK 465 HIS B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263 REMARK 465 MET C 1 REMARK 465 GLN C 34 REMARK 465 GLN C 35 REMARK 465 SER C 36 REMARK 465 ILE C 37 REMARK 465 PRO C 38 REMARK 465 GLY C 39 REMARK 465 GLY C 40 REMARK 465 GLY C 41 REMARK 465 HIS C 259 REMARK 465 HIS C 260 REMARK 465 HIS C 261 REMARK 465 HIS C 262 REMARK 465 HIS C 263 REMARK 465 MET D 1 REMARK 465 HIS D 259 REMARK 465 HIS D 260 REMARK 465 HIS D 261 REMARK 465 HIS D 262 REMARK 465 HIS D 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 32 -63.45 -121.25 REMARK 500 ALA A 146 -160.12 -76.43 REMARK 500 VAL A 147 128.26 -39.20 REMARK 500 ASP A 203 -2.93 67.49 REMARK 500 ASN A 226 16.72 59.68 REMARK 500 ILE B 32 -78.28 -72.75 REMARK 500 GLN B 34 74.53 32.75 REMARK 500 ILE B 37 113.97 -35.08 REMARK 500 SER B 42 102.58 -29.86 REMARK 500 ILE B 44 -72.49 -62.71 REMARK 500 ALA B 146 -160.16 -76.44 REMARK 500 VAL B 147 128.26 -39.20 REMARK 500 ASP B 203 -2.89 67.39 REMARK 500 ASN B 226 16.69 59.70 REMARK 500 ILE C 32 -63.45 -121.20 REMARK 500 ALA C 146 -160.10 -76.43 REMARK 500 VAL C 147 128.30 -39.27 REMARK 500 ASP C 203 -2.96 67.43 REMARK 500 ASN C 226 16.65 59.75 REMARK 500 ILE D 32 -63.47 -121.21 REMARK 500 GLN D 34 92.22 52.92 REMARK 500 GLN D 35 -146.57 -130.88 REMARK 500 SER D 42 -164.09 59.66 REMARK 500 ALA D 146 -160.17 -76.45 REMARK 500 VAL D 147 128.25 -39.16 REMARK 500 ASP D 203 -2.97 67.53 REMARK 500 ASN D 226 16.63 59.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG D 119 0.22 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-48639 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF CRISPR-ASSOCIATED CA4 BOUND CAT1 PENTAGONAL REMARK 900 FILAMENT ASSEMBLY IN THE PRESENCE OF NAD ANALOG BAD DBREF 9MUO A 1 263 PDB 9MUO 9MUO 1 263 DBREF 9MUO a 0 3 PDB 9MUO 9MUO 0 3 DBREF 9MUO b 0 3 PDB 9MUO 9MUO 0 3 DBREF 9MUO B 1 263 PDB 9MUO 9MUO 1 263 DBREF 9MUO C 1 263 PDB 9MUO 9MUO 1 263 DBREF 9MUO D 1 263 PDB 9MUO 9MUO 1 263 SEQRES 1 A 263 MET PRO GLN ALA PHE PHE SER HIS ASN ASN LYS ASP LYS SEQRES 2 A 263 LYS ILE VAL LEU GLU VAL LEU GLU HIS LEU ARG GLN SER SEQRES 3 A 263 LEU VAL ALA THR TRP ILE ASP GLN GLN SER ILE PRO GLY SEQRES 4 A 263 GLY GLY SER LEU ILE GLN GLN ILE ILE ALA GLY ILE SER SEQRES 5 A 263 LYS SER GLN TYR PHE LEU ALA PHE LEU SER ASN GLU TYR SEQRES 6 A 263 LEU LYS SER ASP TRP CYS TRP ASP GLU LEU GLU GLN ALA SEQRES 7 A 263 TYR ALA LEU HIS GLN LYS GLY LYS VAL LYS ILE ILE PRO SEQRES 8 A 263 ILE LEU LEU THR ASN ARG ALA GLN LEU ASP LEU ASN ALA SEQRES 9 A 263 LEU THR ASP ALA ARG ARG ASN PHE LEU GLU SER ILE LEU SEQRES 10 A 263 THR ARG LEU LYS TYR VAL GLU PHE ASP PRO HIS ASN MET SEQRES 11 A 263 THR ARG SER LEU GLY SER VAL ALA GLU ALA LEU TRP GLN SEQRES 12 A 263 ASN GLU ALA VAL ARG PHE GLU PRO ILE ARG MET ILE LYS SEQRES 13 A 263 VAL ASN GLY THR GLU LEU GLN VAL VAL GLU PHE LYS ILE SEQRES 14 A 263 PRO GLY SER ASN LEU PRO VAL ASP PHE LEU HIS HIS TRP SEQRES 15 A 263 ASP LEU LYS ILE GLU ASP PHE ILE ALA THR SER PRO ASN SEQRES 16 A 263 GLU GLN LYS PRO VAL LYS PHE ASP VAL PRO VAL ALA LEU SEQRES 17 A 263 TYR GLY PRO GLY PRO ASN TRP LEU TYR ALA PHE LEU THR SEQRES 18 A 263 LEU PRO PHE LYS ASN ARG ASN THR VAL PHE VAL PHE ASN SEQRES 19 A 263 SER ARG THR SER GLU TYR ILE CYS VAL TYR SER LYS SER SEQRES 20 A 263 ALA GLY LEU ALA PRO GLY MET VAL LEU LYS GLY HIS HIS SEQRES 21 A 263 HIS HIS HIS SEQRES 1 a 4 A A A A SEQRES 1 b 4 A A A A SEQRES 1 B 263 MET PRO GLN ALA PHE PHE SER HIS ASN ASN LYS ASP LYS SEQRES 2 B 263 LYS ILE VAL LEU GLU VAL LEU GLU HIS LEU ARG GLN SER SEQRES 3 B 263 LEU VAL ALA THR TRP ILE ASP GLN GLN SER ILE PRO GLY SEQRES 4 B 263 GLY GLY SER LEU ILE GLN GLN ILE ILE ALA GLY ILE SER SEQRES 5 B 263 LYS SER GLN TYR PHE LEU ALA PHE LEU SER ASN GLU TYR SEQRES 6 B 263 LEU LYS SER ASP TRP CYS TRP ASP GLU LEU GLU GLN ALA SEQRES 7 B 263 TYR ALA LEU HIS GLN LYS GLY LYS VAL LYS ILE ILE PRO SEQRES 8 B 263 ILE LEU LEU THR ASN ARG ALA GLN LEU ASP LEU ASN ALA SEQRES 9 B 263 LEU THR ASP ALA ARG ARG ASN PHE LEU GLU SER ILE LEU SEQRES 10 B 263 THR ARG LEU LYS TYR VAL GLU PHE ASP PRO HIS ASN MET SEQRES 11 B 263 THR ARG SER LEU GLY SER VAL ALA GLU ALA LEU TRP GLN SEQRES 12 B 263 ASN GLU ALA VAL ARG PHE GLU PRO ILE ARG MET ILE LYS SEQRES 13 B 263 VAL ASN GLY THR GLU LEU GLN VAL VAL GLU PHE LYS ILE SEQRES 14 B 263 PRO GLY SER ASN LEU PRO VAL ASP PHE LEU HIS HIS TRP SEQRES 15 B 263 ASP LEU LYS ILE GLU ASP PHE ILE ALA THR SER PRO ASN SEQRES 16 B 263 GLU GLN LYS PRO VAL LYS PHE ASP VAL PRO VAL ALA LEU SEQRES 17 B 263 TYR GLY PRO GLY PRO ASN TRP LEU TYR ALA PHE LEU THR SEQRES 18 B 263 LEU PRO PHE LYS ASN ARG ASN THR VAL PHE VAL PHE ASN SEQRES 19 B 263 SER ARG THR SER GLU TYR ILE CYS VAL TYR SER LYS SER SEQRES 20 B 263 ALA GLY LEU ALA PRO GLY MET VAL LEU LYS GLY HIS HIS SEQRES 21 B 263 HIS HIS HIS SEQRES 1 C 263 MET PRO GLN ALA PHE PHE SER HIS ASN ASN LYS ASP LYS SEQRES 2 C 263 LYS ILE VAL LEU GLU VAL LEU GLU HIS LEU ARG GLN SER SEQRES 3 C 263 LEU VAL ALA THR TRP ILE ASP GLN GLN SER ILE PRO GLY SEQRES 4 C 263 GLY GLY SER LEU ILE GLN GLN ILE ILE ALA GLY ILE SER SEQRES 5 C 263 LYS SER GLN TYR PHE LEU ALA PHE LEU SER ASN GLU TYR SEQRES 6 C 263 LEU LYS SER ASP TRP CYS TRP ASP GLU LEU GLU GLN ALA SEQRES 7 C 263 TYR ALA LEU HIS GLN LYS GLY LYS VAL LYS ILE ILE PRO SEQRES 8 C 263 ILE LEU LEU THR ASN ARG ALA GLN LEU ASP LEU ASN ALA SEQRES 9 C 263 LEU THR ASP ALA ARG ARG ASN PHE LEU GLU SER ILE LEU SEQRES 10 C 263 THR ARG LEU LYS TYR VAL GLU PHE ASP PRO HIS ASN MET SEQRES 11 C 263 THR ARG SER LEU GLY SER VAL ALA GLU ALA LEU TRP GLN SEQRES 12 C 263 ASN GLU ALA VAL ARG PHE GLU PRO ILE ARG MET ILE LYS SEQRES 13 C 263 VAL ASN GLY THR GLU LEU GLN VAL VAL GLU PHE LYS ILE SEQRES 14 C 263 PRO GLY SER ASN LEU PRO VAL ASP PHE LEU HIS HIS TRP SEQRES 15 C 263 ASP LEU LYS ILE GLU ASP PHE ILE ALA THR SER PRO ASN SEQRES 16 C 263 GLU GLN LYS PRO VAL LYS PHE ASP VAL PRO VAL ALA LEU SEQRES 17 C 263 TYR GLY PRO GLY PRO ASN TRP LEU TYR ALA PHE LEU THR SEQRES 18 C 263 LEU PRO PHE LYS ASN ARG ASN THR VAL PHE VAL PHE ASN SEQRES 19 C 263 SER ARG THR SER GLU TYR ILE CYS VAL TYR SER LYS SER SEQRES 20 C 263 ALA GLY LEU ALA PRO GLY MET VAL LEU LYS GLY HIS HIS SEQRES 21 C 263 HIS HIS HIS SEQRES 1 D 263 MET PRO GLN ALA PHE PHE SER HIS ASN ASN LYS ASP LYS SEQRES 2 D 263 LYS ILE VAL LEU GLU VAL LEU GLU HIS LEU ARG GLN SER SEQRES 3 D 263 LEU VAL ALA THR TRP ILE ASP GLN GLN SER ILE PRO GLY SEQRES 4 D 263 GLY GLY SER LEU ILE GLN GLN ILE ILE ALA GLY ILE SER SEQRES 5 D 263 LYS SER GLN TYR PHE LEU ALA PHE LEU SER ASN GLU TYR SEQRES 6 D 263 LEU LYS SER ASP TRP CYS TRP ASP GLU LEU GLU GLN ALA SEQRES 7 D 263 TYR ALA LEU HIS GLN LYS GLY LYS VAL LYS ILE ILE PRO SEQRES 8 D 263 ILE LEU LEU THR ASN ARG ALA GLN LEU ASP LEU ASN ALA SEQRES 9 D 263 LEU THR ASP ALA ARG ARG ASN PHE LEU GLU SER ILE LEU SEQRES 10 D 263 THR ARG LEU LYS TYR VAL GLU PHE ASP PRO HIS ASN MET SEQRES 11 D 263 THR ARG SER LEU GLY SER VAL ALA GLU ALA LEU TRP GLN SEQRES 12 D 263 ASN GLU ALA VAL ARG PHE GLU PRO ILE ARG MET ILE LYS SEQRES 13 D 263 VAL ASN GLY THR GLU LEU GLN VAL VAL GLU PHE LYS ILE SEQRES 14 D 263 PRO GLY SER ASN LEU PRO VAL ASP PHE LEU HIS HIS TRP SEQRES 15 D 263 ASP LEU LYS ILE GLU ASP PHE ILE ALA THR SER PRO ASN SEQRES 16 D 263 GLU GLN LYS PRO VAL LYS PHE ASP VAL PRO VAL ALA LEU SEQRES 17 D 263 TYR GLY PRO GLY PRO ASN TRP LEU TYR ALA PHE LEU THR SEQRES 18 D 263 LEU PRO PHE LYS ASN ARG ASN THR VAL PHE VAL PHE ASN SEQRES 19 D 263 SER ARG THR SER GLU TYR ILE CYS VAL TYR SER LYS SER SEQRES 20 D 263 ALA GLY LEU ALA PRO GLY MET VAL LEU LYS GLY HIS HIS SEQRES 21 D 263 HIS HIS HIS HET DQV B 301 44 HETNAM DQV [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4- HETNAM 2 DQV DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4R,5S)-5- HETNAM 3 DQV (3-CARBAMOYLPHENYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2- HETNAM 4 DQV YL]METHYL DIHYDROGEN DIPHOSPHATE (NON-PREFERRED NAME) FORMUL 7 DQV C22 H28 N6 O14 P2 HELIX 1 AA1 ASN A 9 LYS A 11 5 3 HELIX 2 AA2 ASP A 12 GLN A 25 1 14 HELIX 3 AA3 SER A 62 LYS A 67 1 6 HELIX 4 AA4 SER A 68 LEU A 81 1 14 HELIX 5 AA5 HIS A 82 GLY A 85 5 4 HELIX 6 AA6 ASN A 96 LEU A 100 5 5 HELIX 7 AA7 THR A 106 ARG A 119 1 14 HELIX 8 AA8 ASN A 129 ASN A 144 1 16 HELIX 9 AA9 ASP A 177 TRP A 182 1 6 HELIX 10 AB1 LYS A 185 ILE A 190 5 6 HELIX 11 AB2 PRO A 213 LEU A 222 1 10 HELIX 12 AB3 PRO A 223 LYS A 225 5 3 HELIX 13 AB4 ASN B 9 LYS B 11 5 3 HELIX 14 AB5 ASP B 12 GLN B 25 1 14 HELIX 15 AB6 SER B 62 LYS B 67 1 6 HELIX 16 AB7 SER B 68 LEU B 81 1 14 HELIX 17 AB8 HIS B 82 GLY B 85 5 4 HELIX 18 AB9 ASN B 96 LEU B 100 5 5 HELIX 19 AC1 THR B 106 ARG B 119 1 14 HELIX 20 AC2 ASN B 129 ASN B 144 1 16 HELIX 21 AC3 ASP B 177 TRP B 182 1 6 HELIX 22 AC4 LYS B 185 ILE B 190 5 6 HELIX 23 AC5 PRO B 213 LEU B 222 1 10 HELIX 24 AC6 PRO B 223 LYS B 225 5 3 HELIX 25 AC7 ASN C 9 LYS C 11 5 3 HELIX 26 AC8 ASP C 12 GLN C 25 1 14 HELIX 27 AC9 SER C 62 LYS C 67 1 6 HELIX 28 AD1 SER C 68 LEU C 81 1 14 HELIX 29 AD2 HIS C 82 GLY C 85 5 4 HELIX 30 AD3 ASN C 96 LEU C 100 5 5 HELIX 31 AD4 THR C 106 ARG C 119 1 14 HELIX 32 AD5 ASN C 129 ASN C 144 1 16 HELIX 33 AD6 ASP C 177 TRP C 182 1 6 HELIX 34 AD7 LYS C 185 ILE C 190 5 6 HELIX 35 AD8 PRO C 213 LEU C 222 1 10 HELIX 36 AD9 PRO C 223 LYS C 225 5 3 HELIX 37 AE1 ASN D 9 LYS D 11 5 3 HELIX 38 AE2 ASP D 12 GLN D 25 1 14 HELIX 39 AE3 SER D 62 LYS D 67 1 6 HELIX 40 AE4 SER D 68 LEU D 81 1 14 HELIX 41 AE5 HIS D 82 GLY D 85 5 4 HELIX 42 AE6 ASN D 96 LEU D 100 5 5 HELIX 43 AE7 THR D 106 ARG D 119 1 14 HELIX 44 AE8 ASN D 129 ASN D 144 1 16 HELIX 45 AE9 ASP D 177 TRP D 182 1 6 HELIX 46 AF1 LYS D 185 ILE D 190 5 6 HELIX 47 AF2 PRO D 213 LEU D 222 1 10 HELIX 48 AF3 PRO D 223 LYS D 225 5 3 SHEET 1 AA1 5 THR A 30 TRP A 31 0 SHEET 2 AA1 5 GLN A 3 SER A 7 1 N ALA A 4 O TRP A 31 SHEET 3 AA1 5 GLN A 55 LEU A 61 1 O LEU A 58 N PHE A 5 SHEET 4 AA1 5 LYS A 88 LEU A 93 1 O ILE A 90 N PHE A 57 SHEET 5 AA1 5 VAL A 123 GLU A 124 1 O VAL A 123 N LEU A 93 SHEET 1 AA2 6 ARG A 153 VAL A 157 0 SHEET 2 AA2 6 THR A 160 GLU A 166 -1 O VAL A 164 N ARG A 153 SHEET 3 AA2 6 VAL A 206 TYR A 209 1 O ALA A 207 N VAL A 165 SHEET 4 AA2 6 VAL A 230 ASN A 234 1 O PHE A 231 N VAL A 206 SHEET 5 AA2 6 GLU A 239 CYS A 242 -1 O ILE A 241 N VAL A 232 SHEET 6 AA2 6 VAL A 255 LYS A 257 -1 O LEU A 256 N TYR A 240 SHEET 1 AA3 5 THR B 30 TRP B 31 0 SHEET 2 AA3 5 GLN B 3 SER B 7 1 N ALA B 4 O TRP B 31 SHEET 3 AA3 5 GLN B 55 LEU B 61 1 O LEU B 58 N PHE B 5 SHEET 4 AA3 5 LYS B 88 LEU B 93 1 O ILE B 90 N PHE B 57 SHEET 5 AA3 5 VAL B 123 GLU B 124 1 O VAL B 123 N LEU B 93 SHEET 1 AA4 6 ARG B 153 VAL B 157 0 SHEET 2 AA4 6 THR B 160 GLU B 166 -1 O VAL B 164 N ARG B 153 SHEET 3 AA4 6 VAL B 206 TYR B 209 1 O ALA B 207 N VAL B 165 SHEET 4 AA4 6 VAL B 230 ASN B 234 1 O PHE B 231 N VAL B 206 SHEET 5 AA4 6 GLU B 239 CYS B 242 -1 O ILE B 241 N VAL B 232 SHEET 6 AA4 6 VAL B 255 LYS B 257 -1 O LEU B 256 N TYR B 240 SHEET 1 AA5 5 THR C 30 TRP C 31 0 SHEET 2 AA5 5 GLN C 3 SER C 7 1 N ALA C 4 O TRP C 31 SHEET 3 AA5 5 GLN C 55 LEU C 61 1 O LEU C 58 N PHE C 5 SHEET 4 AA5 5 LYS C 88 LEU C 93 1 O ILE C 90 N PHE C 57 SHEET 5 AA5 5 VAL C 123 GLU C 124 1 O VAL C 123 N LEU C 93 SHEET 1 AA6 6 ARG C 153 VAL C 157 0 SHEET 2 AA6 6 THR C 160 GLU C 166 -1 O VAL C 164 N ARG C 153 SHEET 3 AA6 6 VAL C 206 TYR C 209 1 O ALA C 207 N VAL C 165 SHEET 4 AA6 6 VAL C 230 ASN C 234 1 O PHE C 231 N VAL C 206 SHEET 5 AA6 6 GLU C 239 CYS C 242 -1 O ILE C 241 N VAL C 232 SHEET 6 AA6 6 VAL C 255 LYS C 257 -1 O LEU C 256 N TYR C 240 SHEET 1 AA7 5 THR D 30 TRP D 31 0 SHEET 2 AA7 5 GLN D 3 SER D 7 1 N ALA D 4 O TRP D 31 SHEET 3 AA7 5 GLN D 55 LEU D 61 1 O LEU D 58 N PHE D 5 SHEET 4 AA7 5 LYS D 88 LEU D 93 1 O ILE D 90 N PHE D 57 SHEET 5 AA7 5 VAL D 123 GLU D 124 1 O VAL D 123 N LEU D 93 SHEET 1 AA8 6 ARG D 153 VAL D 157 0 SHEET 2 AA8 6 THR D 160 GLU D 166 -1 O VAL D 164 N ARG D 153 SHEET 3 AA8 6 VAL D 206 TYR D 209 1 O ALA D 207 N VAL D 165 SHEET 4 AA8 6 VAL D 230 ASN D 234 1 O PHE D 231 N VAL D 206 SHEET 5 AA8 6 GLU D 239 CYS D 242 -1 O ILE D 241 N VAL D 232 SHEET 6 AA8 6 VAL D 255 LYS D 257 -1 O LEU D 256 N TYR D 240 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 2023 GLY A 258 TER 2112 A a 3 TER 2201 A b 3 TER 4275 GLY B 258 TER 6298 GLY C 258 TER 8372 GLY D 258 HETATM 8373 O3 DQV B 301 178.618 202.735 180.506 1.00216.72 O HETATM 8374 C4 DQV B 301 180.629 205.543 180.702 1.00212.27 C HETATM 8375 C5 DQV B 301 179.928 206.629 180.206 1.00212.83 C HETATM 8376 O4 DQV B 301 177.313 200.586 180.128 1.00212.71 O HETATM 8377 C6 DQV B 301 180.482 207.898 180.298 1.00214.74 C HETATM 8378 N1 DQV B 301 184.478 205.954 178.063 1.00216.33 N HETATM 8379 C7 DQV B 301 178.568 206.451 179.573 1.00214.15 C HETATM 8380 C8 DQV B 301 176.994 205.067 178.629 1.00215.32 C HETATM 8381 N2 DQV B 301 184.352 208.063 178.791 1.00212.71 N HETATM 8382 C9 DQV B 301 176.879 203.740 177.923 1.00215.34 C HETATM 8383 O5 DQV B 301 178.806 201.467 178.323 1.00217.47 O HETATM 8384 C10 DQV B 301 181.890 203.778 177.891 1.00216.47 C HETATM 8385 O6 DQV B 301 180.646 201.049 176.679 1.00214.71 O HETATM 8386 C11 DQV B 301 183.140 203.005 177.548 1.00214.68 C HETATM 8387 C12 DQV B 301 184.827 204.539 178.021 1.00214.88 C HETATM 8388 N3 DQV B 301 182.829 210.137 177.084 1.00211.30 N HETATM 8389 C13 DQV B 301 184.468 203.795 179.306 1.00213.20 C HETATM 8390 O7 DQV B 301 179.252 203.135 176.411 1.00216.14 O HETATM 8391 C14 DQV B 301 183.929 202.479 178.746 1.00213.17 C HETATM 8392 O8 DQV B 301 180.842 202.896 178.379 1.00218.80 O HETATM 8393 C15 DQV B 301 184.809 206.858 179.042 1.00213.67 C HETATM 8394 N4 DQV B 301 182.449 208.393 175.621 1.00211.76 N HETATM 8395 P1 DQV B 301 179.883 202.145 177.336 1.00223.84 P HETATM 8396 O11 DQV B 301 184.993 201.653 178.297 1.00213.41 O HETATM 8397 O10 DQV B 301 185.548 203.642 180.201 1.00210.79 O HETATM 8398 C19 DQV B 301 183.760 206.640 177.121 1.00215.75 C HETATM 8399 N5 DQV B 301 183.236 206.151 175.986 1.00214.08 N HETATM 8400 C18 DQV B 301 182.599 207.101 175.311 1.00211.85 C HETATM 8401 C17 DQV B 301 182.990 208.856 176.774 1.00213.13 C HETATM 8402 C16 DQV B 301 183.687 207.937 177.578 1.00214.54 C HETATM 8403 O9 DQV B 301 184.103 203.922 176.977 1.00213.74 O HETATM 8404 P DQV B 301 177.861 201.856 179.565 1.00221.74 P HETATM 8405 O2 DQV B 301 176.659 202.673 178.881 1.00215.61 O HETATM 8406 O1 DQV B 301 178.159 205.086 179.490 1.00216.27 O HETATM 8407 C20 DQV B 301 177.087 206.320 177.741 1.00214.89 C HETATM 8408 O12 DQV B 301 176.097 207.256 178.151 1.00213.29 O HETATM 8409 C21 DQV B 301 178.473 206.864 178.106 1.00215.53 C HETATM 8410 O13 DQV B 301 178.625 208.256 177.943 1.00213.52 O HETATM 8411 C3 DQV B 301 181.874 205.723 181.282 1.00214.78 C HETATM 8412 C2 DQV B 301 182.424 206.988 181.372 1.00216.23 C HETATM 8413 C1 DQV B 301 181.729 208.087 180.878 1.00216.00 C HETATM 8414 C DQV B 301 182.290 209.468 180.960 1.00213.99 C HETATM 8415 O DQV B 301 183.403 209.655 181.475 1.00213.10 O HETATM 8416 N DQV B 301 181.563 210.465 180.472 1.00214.05 N CONECT 8373 8404 CONECT 8374 8375 8411 CONECT 8375 8374 8377 8379 CONECT 8376 8404 CONECT 8377 8375 8413 CONECT 8378 8387 8393 8398 CONECT 8379 8375 8406 8409 CONECT 8380 8382 8406 8407 CONECT 8381 8393 8402 CONECT 8382 8380 8405 CONECT 8383 8395 8404 CONECT 8384 8386 8392 CONECT 8385 8395 CONECT 8386 8384 8391 8403 CONECT 8387 8378 8389 8403 CONECT 8388 8401 CONECT 8389 8387 8391 8397 CONECT 8390 8395 CONECT 8391 8386 8389 8396 CONECT 8392 8384 8395 CONECT 8393 8378 8381 CONECT 8394 8400 8401 CONECT 8395 8383 8385 8390 8392 CONECT 8396 8391 CONECT 8397 8389 CONECT 8398 8378 8399 8402 CONECT 8399 8398 8400 CONECT 8400 8394 8399 CONECT 8401 8388 8394 8402 CONECT 8402 8381 8398 8401 CONECT 8403 8386 8387 CONECT 8404 8373 8376 8383 8405 CONECT 8405 8382 8404 CONECT 8406 8379 8380 CONECT 8407 8380 8408 8409 CONECT 8408 8407 CONECT 8409 8379 8407 8410 CONECT 8410 8409 CONECT 8411 8374 8412 CONECT 8412 8411 8413 CONECT 8413 8377 8412 8414 CONECT 8414 8413 8415 8416 CONECT 8415 8414 CONECT 8416 8414 MASTER 210 0 1 48 44 0 0 6 8410 6 44 86 END