HEADER IMMUNE SYSTEM 14-JAN-25 9MUY TITLE ANTI-IL6 DESIGNED FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-IL6 DESIGNED FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-IL6 DESIGNED FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 9 ORGANISM_COMMON: RAT; SOURCE 10 ORGANISM_TAXID: 10116; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ANTIBODY, DESIGN, MACHINE LEARNING, FAB, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KIEFER,N.C.FREY,R.G.ALBERSTEIN,F.SEEGER,A.M.WATKINS, AUTHOR 2 V.GLIGORIJEVIC,Y.DOU,Y.TANG,A.REGEV,R.BONNEAU REVDAT 1 09-SEP-26 9MUY 0 JRNL AUTH N.C.FREY,F.SEEGER,J.R.KIEFER,R.G.ALBERSTEIN,A.M.WATKINS, JRNL AUTH 2 R.BONNEAU,A.REGEV,I.HOTZEL JRNL TITL LAB-IN-THE-LOOP THERAPEUTIC ANTIBODY DESIGN WITH DEEP JRNL TITL 2 LEARNING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.2_5419: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.940 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 38938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 3770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.3300 - 5.9100 1.00 2677 132 0.2282 0.2409 REMARK 3 2 5.9100 - 4.7000 0.99 2630 174 0.1641 0.1660 REMARK 3 3 4.6900 - 4.1000 1.00 2647 181 0.1483 0.1513 REMARK 3 4 4.1000 - 3.7300 1.00 2646 141 0.1797 0.1965 REMARK 3 5 3.7300 - 3.4600 1.00 2680 161 0.1943 0.2308 REMARK 3 6 3.4600 - 3.2600 1.00 2738 91 0.2094 0.2301 REMARK 3 7 3.2600 - 3.0900 1.00 2741 78 0.2190 0.2398 REMARK 3 8 3.0900 - 2.9600 0.99 2642 123 0.2251 0.2549 REMARK 3 9 2.9600 - 2.8500 0.99 2729 113 0.2180 0.2854 REMARK 3 10 2.8500 - 2.7500 1.00 2691 118 0.2259 0.2332 REMARK 3 11 2.7500 - 2.6600 1.00 2619 126 0.2383 0.2961 REMARK 3 12 2.6600 - 2.5900 0.99 2730 116 0.2225 0.2608 REMARK 3 13 2.5900 - 2.5200 1.00 2698 162 0.2203 0.2360 REMARK 3 14 2.5200 - 2.4600 1.00 2631 135 0.2224 0.2546 REMARK 3 15 2.4600 - 2.4000 1.00 2733 138 0.2248 0.2737 REMARK 3 16 2.4000 - 2.3500 1.00 2654 129 0.2311 0.2364 REMARK 3 17 2.3500 - 2.3000 1.00 2712 132 0.2275 0.2872 REMARK 3 18 2.3000 - 2.2600 1.00 2640 152 0.2378 0.2354 REMARK 3 19 2.2600 - 2.2200 1.00 2639 162 0.2263 0.2578 REMARK 3 20 2.2200 - 2.1800 0.99 2682 149 0.2358 0.2901 REMARK 3 21 2.1800 - 2.1500 1.00 2630 125 0.2511 0.3125 REMARK 3 22 2.1500 - 2.1100 1.00 2742 168 0.2526 0.2859 REMARK 3 23 2.1100 - 2.0800 1.00 2595 141 0.2501 0.2271 REMARK 3 24 2.0800 - 2.0500 0.99 2659 167 0.2626 0.2818 REMARK 3 25 2.0500 - 2.0200 0.98 2648 168 0.2703 0.2895 REMARK 3 26 2.0200 - 2.0000 0.99 2561 156 0.2750 0.2624 REMARK 3 27 2.0000 - 1.9700 0.99 2722 132 0.2789 0.2546 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3438 REMARK 3 ANGLE : 0.832 4687 REMARK 3 CHIRALITY : 0.050 520 REMARK 3 PLANARITY : 0.007 600 REMARK 3 DIHEDRAL : 15.790 1203 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2748 1.3207 47.4507 REMARK 3 T TENSOR REMARK 3 T11: 0.2995 T22: 0.2212 REMARK 3 T33: 0.3047 T12: -0.0178 REMARK 3 T13: -0.0194 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.5095 L22: 1.2901 REMARK 3 L33: 1.4394 L12: 0.1508 REMARK 3 L13: 0.2651 L23: -0.3061 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.0191 S13: -0.0451 REMARK 3 S21: 0.1316 S22: -0.0034 S23: -0.1583 REMARK 3 S31: 0.0512 S32: 0.1337 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 88 THROUGH 100D) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7608 9.5230 41.6388 REMARK 3 T TENSOR REMARK 3 T11: 0.4048 T22: 0.3784 REMARK 3 T33: 0.5842 T12: 0.0733 REMARK 3 T13: -0.0176 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.2156 L22: 0.3706 REMARK 3 L33: 0.4581 L12: 0.2838 REMARK 3 L13: 0.0866 L23: 0.0183 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: 0.3763 S13: 0.1913 REMARK 3 S21: 0.0397 S22: -0.1954 S23: 0.6557 REMARK 3 S31: -0.3569 S32: -0.4223 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 100E THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6093 4.5766 39.4270 REMARK 3 T TENSOR REMARK 3 T11: 0.3132 T22: 0.2500 REMARK 3 T33: 0.3983 T12: -0.0295 REMARK 3 T13: -0.0112 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.0988 L22: 0.2916 REMARK 3 L33: 0.2364 L12: 0.1715 REMARK 3 L13: -0.0137 L23: 0.0679 REMARK 3 S TENSOR REMARK 3 S11: -0.0703 S12: 0.2177 S13: -0.3184 REMARK 3 S21: -0.0521 S22: -0.0340 S23: 0.1996 REMARK 3 S31: 0.1389 S32: -0.0396 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 112 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6932 1.2007 24.8490 REMARK 3 T TENSOR REMARK 3 T11: 0.5040 T22: 0.9059 REMARK 3 T33: 0.7940 T12: -0.1528 REMARK 3 T13: 0.0815 T23: -0.2222 REMARK 3 L TENSOR REMARK 3 L11: 0.3045 L22: 0.2703 REMARK 3 L33: 0.0870 L12: -0.0482 REMARK 3 L13: -0.0216 L23: 0.1616 REMARK 3 S TENSOR REMARK 3 S11: -0.0571 S12: 0.3897 S13: -0.2464 REMARK 3 S21: -0.5431 S22: 0.6005 S23: -0.0947 REMARK 3 S31: 0.3389 S32: -0.0023 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 136 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2559 6.6889 21.3684 REMARK 3 T TENSOR REMARK 3 T11: 0.6243 T22: 0.7007 REMARK 3 T33: 0.5963 T12: -0.1919 REMARK 3 T13: 0.1335 T23: -0.1653 REMARK 3 L TENSOR REMARK 3 L11: 1.0390 L22: 0.6186 REMARK 3 L33: 0.8292 L12: 0.1285 REMARK 3 L13: 0.2866 L23: 0.5763 REMARK 3 S TENSOR REMARK 3 S11: -0.3617 S12: 0.4728 S13: -0.3776 REMARK 3 S21: -0.6259 S22: 0.4591 S23: -0.6179 REMARK 3 S31: -0.3954 S32: 0.4874 S33: 0.0004 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4260 -1.7808 27.0871 REMARK 3 T TENSOR REMARK 3 T11: 0.3429 T22: 0.3861 REMARK 3 T33: 0.2860 T12: -0.0464 REMARK 3 T13: -0.0146 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.4987 L22: 1.5853 REMARK 3 L33: 0.9531 L12: -0.0066 REMARK 3 L13: 0.4697 L23: 0.6843 REMARK 3 S TENSOR REMARK 3 S11: -0.0720 S12: 0.3920 S13: -0.0076 REMARK 3 S21: -0.2893 S22: 0.0665 S23: 0.0542 REMARK 3 S31: -0.1340 S32: 0.1102 S33: 0.0035 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 114 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5040 -5.4843 11.8884 REMARK 3 T TENSOR REMARK 3 T11: 0.6973 T22: 1.0767 REMARK 3 T33: 0.9405 T12: -0.2806 REMARK 3 T13: 0.4926 T23: -0.5247 REMARK 3 L TENSOR REMARK 3 L11: 3.1140 L22: 0.5036 REMARK 3 L33: 0.6599 L12: 1.0800 REMARK 3 L13: 0.2201 L23: -0.1855 REMARK 3 S TENSOR REMARK 3 S11: -0.4380 S12: 0.0236 S13: -1.0367 REMARK 3 S21: -0.5481 S22: 0.7622 S23: -0.9765 REMARK 3 S31: 0.2008 S32: 0.4553 S33: 0.2899 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 153 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7342 -5.4568 15.2024 REMARK 3 T TENSOR REMARK 3 T11: 0.8442 T22: 0.7366 REMARK 3 T33: 0.7498 T12: -0.1667 REMARK 3 T13: 0.2246 T23: -0.2849 REMARK 3 L TENSOR REMARK 3 L11: 0.2144 L22: 0.0423 REMARK 3 L33: 0.3926 L12: 0.0528 REMARK 3 L13: 0.1227 L23: -0.0703 REMARK 3 S TENSOR REMARK 3 S11: -0.3529 S12: 0.3949 S13: -0.3250 REMARK 3 S21: -0.6214 S22: 0.5701 S23: -0.9046 REMARK 3 S31: 0.3607 S32: -0.0357 S33: 0.0456 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9944 -9.9922 16.0492 REMARK 3 T TENSOR REMARK 3 T11: 0.8186 T22: 1.1272 REMARK 3 T33: 1.3590 T12: 0.0190 REMARK 3 T13: 0.3213 T23: -0.4662 REMARK 3 L TENSOR REMARK 3 L11: 1.0661 L22: 0.6148 REMARK 3 L33: 0.4683 L12: 0.3560 REMARK 3 L13: -0.3520 L23: -0.5390 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: -0.1278 S13: -0.6514 REMARK 3 S21: 0.0461 S22: 0.0108 S23: -0.8920 REMARK 3 S31: 0.7410 S32: 0.8445 S33: -0.0174 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 189 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5193 -10.4573 4.1698 REMARK 3 T TENSOR REMARK 3 T11: 1.0191 T22: 1.2517 REMARK 3 T33: 1.0480 T12: -0.4958 REMARK 3 T13: 0.4064 T23: -0.7151 REMARK 3 L TENSOR REMARK 3 L11: 0.1225 L22: 0.3810 REMARK 3 L33: 0.2716 L12: 0.1101 REMARK 3 L13: -0.1777 L23: -0.2238 REMARK 3 S TENSOR REMARK 3 S11: -0.1649 S12: -0.1146 S13: -0.1238 REMARK 3 S21: -0.0938 S22: 0.1529 S23: -0.6736 REMARK 3 S31: 0.4323 S32: 0.3812 S33: -1.0939 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 205 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0710 -5.5087 4.2505 REMARK 3 T TENSOR REMARK 3 T11: 0.9382 T22: 1.4929 REMARK 3 T33: 0.9746 T12: -0.3658 REMARK 3 T13: 0.7860 T23: -0.6429 REMARK 3 L TENSOR REMARK 3 L11: 0.0617 L22: 0.3530 REMARK 3 L33: 0.5193 L12: -0.1374 REMARK 3 L13: -0.0804 L23: 0.0540 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: -0.0915 S13: 0.0602 REMARK 3 S21: 0.0257 S22: 0.0250 S23: -0.1457 REMARK 3 S31: 0.2157 S32: 0.1422 S33: -0.3814 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9MUY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-25. REMARK 100 THE DEPOSITION ID IS D_1000291896. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-24 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38959 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.80900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M AMMONIUM ACETATE, 0.1M ZINC REMARK 280 CHLORIDE, 0.1M BIS-TRIS PH7.2, 15% V/V PEG SMEAR HIGH, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.75500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.75500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 GLY H 134 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN H 105 CG CD OE1 NE2 REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 LYS L 126 CG CD CE NZ REMARK 470 LYS L 149 CG CD CE NZ REMARK 470 LYS L 169 CG CD CE NZ REMARK 470 LYS L 183 CG CD CE NZ REMARK 470 GLU L 187 CG CD OE1 OE2 REMARK 470 LYS L 188 CG CD CE NZ REMARK 470 LYS L 190 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE2 HIS L 52 ZN ZN H 301 2556 1.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS H 43 -169.96 -127.43 REMARK 500 PRO H 126 -162.32 -72.98 REMARK 500 ASP H 144 76.00 61.77 REMARK 500 LEU H 189 94.26 -60.82 REMARK 500 THR L 51 -51.09 75.63 REMARK 500 TRP L 94 -132.05 49.96 REMARK 500 ASN L 138 67.16 60.41 REMARK 500 LYS L 169 -58.54 -121.16 REMARK 500 LYS L 190 -30.82 -138.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP H 53 OD2 REMARK 620 2 ASP H 55 OD2 105.0 REMARK 620 3 HOH H 504 O 108.0 131.8 REMARK 620 4 HIS L 52 NE2 90.7 124.0 25.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS H 164 NE2 REMARK 620 2 ASN L 138 ND2 124.2 REMARK 620 N 1 DBREF 9MUY H 1 217 PDB 9MUY 9MUY 1 217 DBREF 9MUY L 1 214 PDB 9MUY 9MUY 1 214 SEQRES 1 H 228 TRP VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 228 PRO GLY ARG SER MET LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 228 PHE ILE PHE SER ASP TRP GLY MET ALA TRP VAL ARG GLU SEQRES 4 H 228 ALA PRO LYS LYS GLY LEU GLU TRP VAL ALA TYR ILE ASN SEQRES 5 H 228 TYR ASP GLY ASP THR THR TYR TYR ARG ASP SER VAL LYS SEQRES 6 H 228 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SER THR SEQRES 7 H 228 LEU TYR LEU GLN ILE ASP SER LEU ARG SER GLU ASP THR SEQRES 8 H 228 ALA THR TYR TYR CYS THR THR GLY TYR TYR TYR ASP GLY SEQRES 9 H 228 SER TYR TYR TYR ASP ARG PHE VAL TYR TRP GLY GLN GLY SEQRES 10 H 228 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 228 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 228 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 228 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 228 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 228 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 228 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 228 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 H 228 VAL GLU PRO LYS SER CYS ASP SEQRES 1 L 213 ASP ILE GLN MET THR GLN SER PRO SER PHE LEU SER ALA SEQRES 2 L 213 SER GLU GLY GLU ARG VAL THR LEU ASN CYS ARG ALA SER SEQRES 3 L 213 GLN ASN ILE ASN LYS TYR LEU ASP TRP TYR GLN GLN LYS SEQRES 4 L 213 LEU GLY GLU ALA PRO LYS LEU LEU ILE TYR ASN THR HIS SEQRES 5 L 213 ASN LEU HIS THR GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR ASP TYR THR ILE THR ILE SER SER LEU SEQRES 7 L 213 GLN PRO GLU ASP VAL ALA THR TYR PHE CYS LEU GLN ARG SEQRES 8 L 213 ASN SER TRP TYR THR PHE GLY ALA GLY THR LYS LEU GLU SEQRES 9 L 213 LEU LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 L 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 L 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 L 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 L 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 L 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 L 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 L 213 ASN ARG GLY GLU CYS HET ZN H 301 1 HET EDO H 302 10 HET EDO H 303 10 HET EDO H 304 10 HET CL H 305 1 HET CL H 306 1 HET CL H 307 1 HET CL H 308 1 HET ZN L 301 1 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 EDO 3(C2 H6 O2) FORMUL 7 CL 4(CL 1-) FORMUL 12 HOH *223(H2 O) HELIX 1 AA1 ILE H 28 TRP H 32 5 5 HELIX 2 AA2 ARG H 83 THR H 87 5 5 HELIX 3 AA3 SER H 156 ALA H 158 5 3 HELIX 4 AA4 PRO H 185 LEU H 189 5 5 HELIX 5 AA5 LYS H 201 ASN H 204 5 4 HELIX 6 AA6 GLN L 79 VAL L 83 5 5 HELIX 7 AA7 SER L 121 SER L 127 1 7 HELIX 8 AA8 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 MET H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA1 4 THR H 77 ILE H 82 -1 O ILE H 82 N MET H 18 SHEET 4 AA1 4 THR H 68 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA2 6 ALA H 88 THR H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AA2 6 MET H 34 GLU H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O TYR H 58 N TYR H 50 SHEET 1 AA3 2 TYR H 97 TYR H 98 0 SHEET 2 AA3 2 TYR H 100B TYR H 100C-1 O TYR H 100C N TYR H 97 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 ALA H 136 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA4 4 TYR H 176 VAL H 184 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 SER H 120 LEU H 124 0 SHEET 2 AA5 4 ALA H 136 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA5 4 TYR H 176 VAL H 184 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 VAL H 211 -1 O VAL H 207 N VAL H 198 SHEET 1 AA7 4 MET L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 PHE L 10 SER L 14 0 SHEET 2 AA8 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N TYR L 36 O PHE L 87 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AA8 6 ASN L 53 LEU L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA9 4 PHE L 10 SER L 14 0 SHEET 2 AA9 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA9 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA9 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.06 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.04 LINK OD2 ASP H 53 ZN ZN H 301 1555 1555 1.94 LINK OD2 ASP H 55 ZN ZN H 301 1555 1555 1.86 LINK NE2 HIS H 164 ZN ZN L 301 1555 1555 2.28 LINK ZN ZN H 301 O HOH H 504 1555 1555 2.11 LINK ZN ZN H 301 NE2 HIS L 52 2556 1555 2.20 LINK ND2 ASN L 138 ZN ZN L 301 1555 1555 2.61 CISPEP 1 PHE H 146 PRO H 147 0 -6.83 CISPEP 2 GLU H 148 PRO H 149 0 -0.40 CISPEP 3 SER L 7 PRO L 8 0 -5.04 CISPEP 4 TYR L 140 PRO L 141 0 -0.65 CRYST1 91.510 64.350 104.570 90.00 114.66 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010928 0.000000 0.005017 0.00000 SCALE2 0.000000 0.015540 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010523 0.00000 CONECT 335 1504 CONECT 839 6518 CONECT 858 6518 CONECT 1504 335 CONECT 2196 3017 CONECT 2553 6553 CONECT 3017 2196 CONECT 3675 4685 CONECT 4685 3675 CONECT 5362 6216 CONECT 5426 6553 CONECT 6216 5362 CONECT 6518 839 858 6659 CONECT 6519 6520 6521 6523 6524 CONECT 6520 6519 6525 CONECT 6521 6519 6522 6526 6527 CONECT 6522 6521 6528 CONECT 6523 6519 CONECT 6524 6519 CONECT 6525 6520 CONECT 6526 6521 CONECT 6527 6521 CONECT 6528 6522 CONECT 6529 6530 6531 6533 6534 CONECT 6530 6529 6535 CONECT 6531 6529 6532 6536 6537 CONECT 6532 6531 6538 CONECT 6533 6529 CONECT 6534 6529 CONECT 6535 6530 CONECT 6536 6531 CONECT 6537 6531 CONECT 6538 6532 CONECT 6539 6540 6541 6543 6544 CONECT 6540 6539 6545 CONECT 6541 6539 6542 6546 6547 CONECT 6542 6541 6548 CONECT 6543 6539 CONECT 6544 6539 CONECT 6545 6540 CONECT 6546 6541 CONECT 6547 6541 CONECT 6548 6542 CONECT 6553 2553 5426 CONECT 6659 6518 MASTER 481 0 9 8 45 0 0 6 3558 2 45 35 END