data_9N3I # _entry.id 9N3I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9N3I pdb_00009n3i 10.2210/pdb9n3i/pdb WWPDB D_1000290938 ? ? EMDB EMD-48851 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-07-29 ? 2 'EM metadata' 1 0 2026-07-29 ? 3 'Additional map' 1 0 2026-07-29 1 4 FSC 1 0 2026-07-29 ? 5 'Half map' 1 0 2026-07-29 1 6 'Half map' 1 0 2026-07-29 2 7 Image 1 0 2026-07-29 ? 8 Mask 1 0 2026-07-29 1 9 'Primary map' 1 0 2026-07-29 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9N3I _pdbx_database_status.recvd_initial_deposition_date 2025-01-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Vibrio cholerae Glycine Riboswitch - glycine bound at 2.9A resolution' _pdbx_database_related.db_id EMD-48851 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email kys@lanl.gov _pdbx_contact_author.name_first Karissa _pdbx_contact_author.name_last Sanbonmatsu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7965-7392 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jespersen, N.' 1 0000-0001-6931-1526 'Singhal, A.' 2 0000-0003-2949-6962 'Prajapati, J.D.' 3 0000-0002-7129-403X 'Sanbonmatsu, K.' 4 0000-0002-7965-7392 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Vibrio cholerae Glycine Riboswitch - glycine bound at 2.9A resolution' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jespersen, N.' 1 0000-0001-6931-1526 primary 'Singhal, A.' 2 0000-0003-2949-6962 primary 'Prajapati, J.D.' 3 0000-0002-7129-403X primary 'Sanbonmatsu, K.' 4 0000-0002-7965-7392 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Glycine Riboswitch' 76063.195 1 ? ? ? ? 2 non-polymer syn GLYCINE 75.067 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 14 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GUCCGUUGAAGACUGCAGGAGAGUGGUUGUUAACCAGAUUUUAACAUCUGAGCCAAAUAACCCGCCGAAGAAGUAAAUCU UUCAGGUGCAUUAUUCUUAGCCAUAUAUUGGCAACGAAUAAGCGAGGACUGUAGUUGGAGGAACCUCUGGAGAGAACCGU UUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGACAGAGGAGUGAA ; _entity_poly.pdbx_seq_one_letter_code_can ;GUCCGUUGAAGACUGCAGGAGAGUGGUUGUUAACCAGAUUUUAACAUCUGAGCCAAAUAACCCGCCGAAGAAGUAAAUCU UUCAGGUGCAUUAUUCUUAGCCAUAUAUUGGCAACGAAUAAGCGAGGACUGUAGUUGGAGGAACCUCUGGAGAGAACCGU UUAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGACAGAGGAGUGAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCINE GLY 3 'MAGNESIUM ION' MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 C n 1 4 C n 1 5 G n 1 6 U n 1 7 U n 1 8 G n 1 9 A n 1 10 A n 1 11 G n 1 12 A n 1 13 C n 1 14 U n 1 15 G n 1 16 C n 1 17 A n 1 18 G n 1 19 G n 1 20 A n 1 21 G n 1 22 A n 1 23 G n 1 24 U n 1 25 G n 1 26 G n 1 27 U n 1 28 U n 1 29 G n 1 30 U n 1 31 U n 1 32 A n 1 33 A n 1 34 C n 1 35 C n 1 36 A n 1 37 G n 1 38 A n 1 39 U n 1 40 U n 1 41 U n 1 42 U n 1 43 A n 1 44 A n 1 45 C n 1 46 A n 1 47 U n 1 48 C n 1 49 U n 1 50 G n 1 51 A n 1 52 G n 1 53 C n 1 54 C n 1 55 A n 1 56 A n 1 57 A n 1 58 U n 1 59 A n 1 60 A n 1 61 C n 1 62 C n 1 63 C n 1 64 G n 1 65 C n 1 66 C n 1 67 G n 1 68 A n 1 69 A n 1 70 G n 1 71 A n 1 72 A n 1 73 G n 1 74 U n 1 75 A n 1 76 A n 1 77 A n 1 78 U n 1 79 C n 1 80 U n 1 81 U n 1 82 U n 1 83 C n 1 84 A n 1 85 G n 1 86 G n 1 87 U n 1 88 G n 1 89 C n 1 90 A n 1 91 U n 1 92 U n 1 93 A n 1 94 U n 1 95 U n 1 96 C n 1 97 U n 1 98 U n 1 99 A n 1 100 G n 1 101 C n 1 102 C n 1 103 A n 1 104 U n 1 105 A n 1 106 U n 1 107 A n 1 108 U n 1 109 U n 1 110 G n 1 111 G n 1 112 C n 1 113 A n 1 114 A n 1 115 C n 1 116 G n 1 117 A n 1 118 A n 1 119 U n 1 120 A n 1 121 A n 1 122 G n 1 123 C n 1 124 G n 1 125 A n 1 126 G n 1 127 G n 1 128 A n 1 129 C n 1 130 U n 1 131 G n 1 132 U n 1 133 A n 1 134 G n 1 135 U n 1 136 U n 1 137 G n 1 138 G n 1 139 A n 1 140 G n 1 141 G n 1 142 A n 1 143 A n 1 144 C n 1 145 C n 1 146 U n 1 147 C n 1 148 U n 1 149 G n 1 150 G n 1 151 A n 1 152 G n 1 153 A n 1 154 G n 1 155 A n 1 156 A n 1 157 C n 1 158 C n 1 159 G n 1 160 U n 1 161 U n 1 162 U n 1 163 A n 1 164 A n 1 165 U n 1 166 C n 1 167 G n 1 168 G n 1 169 U n 1 170 C n 1 171 G n 1 172 C n 1 173 C n 1 174 G n 1 175 A n 1 176 A n 1 177 G n 1 178 G n 1 179 A n 1 180 G n 1 181 C n 1 182 A n 1 183 A n 1 184 G n 1 185 C n 1 186 U n 1 187 C n 1 188 U n 1 189 G n 1 190 C n 1 191 G n 1 192 C n 1 193 A n 1 194 U n 1 195 A n 1 196 U n 1 197 G n 1 198 C n 1 199 A n 1 200 G n 1 201 A n 1 202 G n 1 203 U n 1 204 G n 1 205 A n 1 206 A n 1 207 A n 1 208 C n 1 209 U n 1 210 C n 1 211 U n 1 212 C n 1 213 A n 1 214 G n 1 215 G n 1 216 C n 1 217 A n 1 218 A n 1 219 A n 1 220 A n 1 221 G n 1 222 G n 1 223 A n 1 224 C n 1 225 A n 1 226 G n 1 227 A n 1 228 G n 1 229 G n 1 230 A n 1 231 G n 1 232 U n 1 233 G n 1 234 A n 1 235 A n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 235 _pdbx_entity_src_syn.organism_scientific 'Vibrio cholerae' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 666 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 0 ? ? ? A . n A 1 2 U 2 1 1 U U A . n A 1 3 C 3 2 2 C C A . n A 1 4 C 4 3 3 C C A . n A 1 5 G 5 4 4 G G A . n A 1 6 U 6 5 5 U U A . n A 1 7 U 7 6 6 U U A . n A 1 8 G 8 7 7 G G A . n A 1 9 A 9 8 8 A A A . n A 1 10 A 10 9 9 A A A . n A 1 11 G 11 10 10 G G A . n A 1 12 A 12 11 11 A A A . n A 1 13 C 13 12 12 C C A . n A 1 14 U 14 13 13 U U A . n A 1 15 G 15 14 14 G G A . n A 1 16 C 16 15 15 C C A . n A 1 17 A 17 16 16 A A A . n A 1 18 G 18 17 17 G G A . n A 1 19 G 19 18 18 G G A . n A 1 20 A 20 19 19 A A A . n A 1 21 G 21 20 20 G G A . n A 1 22 A 22 21 21 A A A . n A 1 23 G 23 22 22 G G A . n A 1 24 U 24 23 23 U U A . n A 1 25 G 25 24 24 G G A . n A 1 26 G 26 25 25 G G A . n A 1 27 U 27 26 26 U U A . n A 1 28 U 28 27 27 U U A . n A 1 29 G 29 28 28 G G A . n A 1 30 U 30 29 29 U U A . n A 1 31 U 31 30 30 U U A . n A 1 32 A 32 31 31 A A A . n A 1 33 A 33 32 32 A A A . n A 1 34 C 34 33 33 C C A . n A 1 35 C 35 34 34 C C A . n A 1 36 A 36 35 35 A A A . n A 1 37 G 37 36 36 G G A . n A 1 38 A 38 37 37 A A A . n A 1 39 U 39 38 38 U U A . n A 1 40 U 40 39 39 U U A . n A 1 41 U 41 40 40 U U A . n A 1 42 U 42 41 41 U U A . n A 1 43 A 43 42 42 A A A . n A 1 44 A 44 43 43 A A A . n A 1 45 C 45 44 44 C C A . n A 1 46 A 46 45 45 A A A . n A 1 47 U 47 46 46 U U A . n A 1 48 C 48 47 47 C C A . n A 1 49 U 49 48 48 U U A . n A 1 50 G 50 49 49 G G A . n A 1 51 A 51 50 50 A A A . n A 1 52 G 52 51 51 G G A . n A 1 53 C 53 52 52 C C A . n A 1 54 C 54 53 53 C C A . n A 1 55 A 55 54 54 A A A . n A 1 56 A 56 55 55 A A A . n A 1 57 A 57 56 56 A A A . n A 1 58 U 58 57 57 U U A . n A 1 59 A 59 58 58 A A A . n A 1 60 A 60 59 59 A A A . n A 1 61 C 61 60 60 C C A . n A 1 62 C 62 61 61 C C A . n A 1 63 C 63 62 62 C C A . n A 1 64 G 64 63 63 G G A . n A 1 65 C 65 64 64 C C A . n A 1 66 C 66 65 65 C C A . n A 1 67 G 67 66 66 G G A . n A 1 68 A 68 67 67 A A A . n A 1 69 A 69 68 68 A A A . n A 1 70 G 70 69 69 G G A . n A 1 71 A 71 70 70 A A A . n A 1 72 A 72 71 71 A A A . n A 1 73 G 73 72 72 G G A . n A 1 74 U 74 73 73 U U A . n A 1 75 A 75 74 74 A A A . n A 1 76 A 76 75 75 A A A . n A 1 77 A 77 76 76 A A A . n A 1 78 U 78 77 77 U U A . n A 1 79 C 79 78 78 C C A . n A 1 80 U 80 79 79 U U A . n A 1 81 U 81 80 80 U U A . n A 1 82 U 82 81 81 U U A . n A 1 83 C 83 82 82 C C A . n A 1 84 A 84 83 83 A A A . n A 1 85 G 85 84 84 G G A . n A 1 86 G 86 85 85 G G A . n A 1 87 U 87 86 86 U U A . n A 1 88 G 88 87 87 G G A . n A 1 89 C 89 88 88 C C A . n A 1 90 A 90 89 89 A A A . n A 1 91 U 91 90 90 U U A . n A 1 92 U 92 91 91 U U A . n A 1 93 A 93 92 92 A A A . n A 1 94 U 94 93 93 U U A . n A 1 95 U 95 94 94 U U A . n A 1 96 C 96 95 95 C C A . n A 1 97 U 97 96 96 U U A . n A 1 98 U 98 97 97 U U A . n A 1 99 A 99 98 98 A A A . n A 1 100 G 100 99 99 G G A . n A 1 101 C 101 100 100 C C A . n A 1 102 C 102 101 101 C C A . n A 1 103 A 103 102 102 A A A . n A 1 104 U 104 103 103 U U A . n A 1 105 A 105 104 104 A A A . n A 1 106 U 106 105 105 U U A . n A 1 107 A 107 106 106 A A A . n A 1 108 U 108 107 107 U U A . n A 1 109 U 109 108 108 U U A . n A 1 110 G 110 109 109 G G A . n A 1 111 G 111 110 110 G G A . n A 1 112 C 112 111 111 C C A . n A 1 113 A 113 112 112 A A A . n A 1 114 A 114 113 113 A A A . n A 1 115 C 115 114 114 C C A . n A 1 116 G 116 115 115 G G A . n A 1 117 A 117 116 116 A A A . n A 1 118 A 118 117 117 A A A . n A 1 119 U 119 118 118 U U A . n A 1 120 A 120 119 119 A A A . n A 1 121 A 121 120 120 A A A . n A 1 122 G 122 121 121 G G A . n A 1 123 C 123 122 122 C C A . n A 1 124 G 124 123 123 G G A . n A 1 125 A 125 124 124 A A A . n A 1 126 G 126 125 125 G G A . n A 1 127 G 127 126 126 G G A . n A 1 128 A 128 127 127 A A A . n A 1 129 C 129 128 128 C C A . n A 1 130 U 130 129 129 U U A . n A 1 131 G 131 130 130 G G A . n A 1 132 U 132 131 131 U U A . n A 1 133 A 133 132 132 A A A . n A 1 134 G 134 133 133 G G A . n A 1 135 U 135 134 134 U U A . n A 1 136 U 136 135 135 U U A . n A 1 137 G 137 136 136 G G A . n A 1 138 G 138 137 137 G G A . n A 1 139 A 139 138 138 A A A . n A 1 140 G 140 139 139 G G A . n A 1 141 G 141 140 140 G G A . n A 1 142 A 142 141 141 A A A . n A 1 143 A 143 142 142 A A A . n A 1 144 C 144 143 143 C C A . n A 1 145 C 145 144 144 C C A . n A 1 146 U 146 145 145 U U A . n A 1 147 C 147 146 146 C C A . n A 1 148 U 148 147 147 U U A . n A 1 149 G 149 148 148 G G A . n A 1 150 G 150 149 149 G G A . n A 1 151 A 151 150 150 A A A . n A 1 152 G 152 151 151 G G A . n A 1 153 A 153 152 152 A A A . n A 1 154 G 154 153 153 G G A . n A 1 155 A 155 154 154 A A A . n A 1 156 A 156 155 155 A A A . n A 1 157 C 157 156 156 C C A . n A 1 158 C 158 157 157 C C A . n A 1 159 G 159 158 158 G G A . n A 1 160 U 160 159 159 U U A . n A 1 161 U 161 160 160 U U A . n A 1 162 U 162 161 161 U U A . n A 1 163 A 163 162 162 A A A . n A 1 164 A 164 163 163 A A A . n A 1 165 U 165 164 164 U U A . n A 1 166 C 166 165 165 C C A . n A 1 167 G 167 166 166 G G A . n A 1 168 G 168 167 167 G G A . n A 1 169 U 169 168 168 U U A . n A 1 170 C 170 169 169 C C A . n A 1 171 G 171 170 170 G G A . n A 1 172 C 172 171 171 C C A . n A 1 173 C 173 172 172 C C A . n A 1 174 G 174 173 173 G G A . n A 1 175 A 175 174 174 A A A . n A 1 176 A 176 175 175 A A A . n A 1 177 G 177 176 176 G G A . n A 1 178 G 178 177 177 G G A . n A 1 179 A 179 178 178 A A A . n A 1 180 G 180 179 179 G G A . n A 1 181 C 181 180 180 C C A . n A 1 182 A 182 181 181 A A A . n A 1 183 A 183 182 182 A A A . n A 1 184 G 184 183 183 G G A . n A 1 185 C 185 184 184 C C A . n A 1 186 U 186 185 185 U U A . n A 1 187 C 187 186 186 C C A . n A 1 188 U 188 187 187 U U A . n A 1 189 G 189 188 188 G G A . n A 1 190 C 190 189 189 C C A . n A 1 191 G 191 190 190 G G A . n A 1 192 C 192 191 191 C C A . n A 1 193 A 193 192 192 A A A . n A 1 194 U 194 193 193 U U A . n A 1 195 A 195 194 194 A A A . n A 1 196 U 196 195 195 U U A . n A 1 197 G 197 196 196 G G A . n A 1 198 C 198 197 197 C C A . n A 1 199 A 199 198 198 A A A . n A 1 200 G 200 199 199 G G A . n A 1 201 A 201 200 200 A A A . n A 1 202 G 202 201 201 G G A . n A 1 203 U 203 202 202 U U A . n A 1 204 G 204 203 203 G G A . n A 1 205 A 205 204 204 A A A . n A 1 206 A 206 205 205 A A A . n A 1 207 A 207 206 206 A A A . n A 1 208 C 208 207 207 C C A . n A 1 209 U 209 208 208 U U A . n A 1 210 C 210 209 209 C C A . n A 1 211 U 211 210 210 U U A . n A 1 212 C 212 211 211 C C A . n A 1 213 A 213 212 212 A A A . n A 1 214 G 214 213 213 G G A . n A 1 215 G 215 214 214 G G A . n A 1 216 C 216 215 215 C C A . n A 1 217 A 217 216 216 A A A . n A 1 218 A 218 217 217 A A A . n A 1 219 A 219 218 218 A A A . n A 1 220 A 220 219 219 A A A . n A 1 221 G 221 220 220 G G A . n A 1 222 G 222 221 221 G G A . n A 1 223 A 223 222 222 A A A . n A 1 224 C 224 223 223 C C A . n A 1 225 A 225 224 224 A A A . n A 1 226 G 226 225 225 G G A . n A 1 227 A 227 226 226 A A A . n A 1 228 G 228 227 227 G G A . n A 1 229 G 229 228 228 G G A . n A 1 230 A 230 229 229 A A A . n A 1 231 G 231 230 230 G G A . n A 1 232 U 232 231 ? ? ? A . n A 1 233 G 233 232 ? ? ? A . n A 1 234 A 234 233 ? ? ? A . n A 1 235 A 235 234 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GLY _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GLY _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY 1 301 301 GLY GLY A . C 2 GLY 1 302 401 GLY GLY A . D 3 MG 1 303 101 MG MG A . E 3 MG 1 304 102 MG MG A . F 3 MG 1 305 103 MG MG A . G 3 MG 1 306 104 MG MG A . H 3 MG 1 307 105 MG MG A . I 3 MG 1 308 106 MG MG A . J 3 MG 1 309 107 MG MG A . K 3 MG 1 310 108 MG MG A . L 3 MG 1 311 109 MG MG A . M 3 MG 1 312 110 MG MG A . N 3 MG 1 313 111 MG MG A . O 3 MG 1 314 112 MG MG A . P 3 MG 1 315 113 MG MG A . Q 3 MG 1 316 114 MG MG A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9N3I _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9N3I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9N3I _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9N3I _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.86 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 ? 5531 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.501 ? 8618 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 21.572 ? 3311 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.031 ? 1150 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.003 ? 232 ? f_plane_restr ? ? ? # _struct.entry_id 9N3I _struct.title 'Vibrio cholerae Glycine Riboswitch - glycine bound at 2.9A resolution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9N3I _struct_keywords.text 'Riboswitch, Glycine, Magnesium, Holo, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code CP160480.1 _struct_ref.pdbx_db_accession 2772158317 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;UCCGUUGAAGACUGCAGGAGAGUGGUUGUUAACCAGAUUUUAACAUCUGAGCCAAAUAACCCGCCGAAGAAGUAAAUCUU UCAGGUGCAUUAUUCUUAGCCAUAUAUUGGCAACGAAUAAGCGAGGACUGUAGUUGGAGGAACCUCUGGAGAGAACCGUU UAAUCGGUCGCCGAAGGAGCAAGCUCUGCGCAUAUGCAGAGUGAAACUCUCAGGCAAAAGGACAGAGGAGUGAA ; _struct_ref.pdbx_align_begin 1842282 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9N3I _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 235 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2772158317 _struct_ref_seq.db_align_beg 1842282 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1842049 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 234 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 9N3I _struct_ref_seq_dif.mon_id G _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name GB _struct_ref_seq_dif.pdbx_seq_db_accession_code 2772158317 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 19 O6 ? ? ? 1_555 L MG . MG ? ? A G 18 A MG 311 1_555 ? ? ? ? ? ? ? 2.809 ? ? metalc2 metalc ? ? A G 67 "O2'" ? ? ? 1_555 K MG . MG ? ? A G 66 A MG 310 1_555 ? ? ? ? ? ? ? 1.934 ? ? metalc3 metalc ? ? A A 68 OP2 ? ? ? 1_555 K MG . MG ? ? A A 67 A MG 310 1_555 ? ? ? ? ? ? ? 1.937 ? ? metalc4 metalc ? ? A A 69 OP1 ? ? ? 1_555 M MG . MG ? ? A A 68 A MG 312 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc5 metalc ? ? A G 70 OP2 ? ? ? 1_555 M MG . MG ? ? A G 69 A MG 312 1_555 ? ? ? ? ? ? ? 1.917 ? ? metalc6 metalc ? ? A U 74 O4 ? ? ? 1_555 E MG . MG ? ? A U 73 A MG 304 1_555 ? ? ? ? ? ? ? 1.784 ? ? metalc7 metalc ? ? A U 74 OP2 ? ? ? 1_555 N MG . MG ? ? A U 73 A MG 313 1_555 ? ? ? ? ? ? ? 2.611 ? ? metalc8 metalc ? ? A A 77 OP2 ? ? ? 1_555 E MG . MG ? ? A A 76 A MG 304 1_555 ? ? ? ? ? ? ? 1.781 ? ? metalc9 metalc ? ? A C 79 OP2 ? ? ? 1_555 K MG . MG ? ? A C 78 A MG 310 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc10 metalc ? ? A C 83 OP2 ? ? ? 1_555 O MG . MG ? ? A C 82 A MG 314 1_555 ? ? ? ? ? ? ? 1.879 ? ? metalc11 metalc ? ? A A 84 OP2 ? ? ? 1_555 O MG . MG ? ? A A 83 A MG 314 1_555 ? ? ? ? ? ? ? 1.781 ? ? metalc12 metalc ? ? A G 174 "O2'" ? ? ? 1_555 H MG . MG ? ? A G 173 A MG 307 1_555 ? ? ? ? ? ? ? 2.130 ? ? metalc13 metalc ? ? A A 175 OP2 ? ? ? 1_555 H MG . MG ? ? A A 174 A MG 307 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc14 metalc ? ? A A 176 OP1 ? ? ? 1_555 P MG . MG ? ? A A 175 A MG 315 1_555 ? ? ? ? ? ? ? 2.226 ? ? metalc15 metalc ? ? A G 177 OP2 ? ? ? 1_555 P MG . MG ? ? A G 176 A MG 315 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc16 metalc ? ? A C 208 OP2 ? ? ? 1_555 H MG . MG ? ? A C 207 A MG 307 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc17 metalc ? ? A C 212 OP2 ? ? ? 1_555 I MG . MG ? ? A C 211 A MG 308 1_555 ? ? ? ? ? ? ? 1.917 ? ? metalc18 metalc ? ? A A 213 OP2 ? ? ? 1_555 I MG . MG ? ? A A 212 A MG 308 1_555 ? ? ? ? ? ? ? 1.824 ? ? metalc19 metalc ? ? A A 220 OP2 ? ? ? 1_555 J MG . MG ? ? A A 219 A MG 309 1_555 ? ? ? ? ? ? ? 1.951 ? ? hydrog1 hydrog ? ? A U 2 N3 ? ? ? 1_555 A A 142 N1 ? ? A U 1 A A 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A U 2 O4 ? ? ? 1_555 A A 142 N6 ? ? A U 1 A A 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 141 N1 ? ? A C 2 A G 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 141 O6 ? ? A C 2 A G 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 141 N2 ? ? A C 2 A G 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 140 N1 ? ? A C 3 A G 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 140 O6 ? ? A C 3 A G 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 140 N2 ? ? A C 3 A G 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 8 N2 ? ? ? 1_555 A A 139 N7 ? ? A G 7 A A 138 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog10 hydrog ? ? A G 8 N3 ? ? ? 1_555 A A 139 N6 ? ? A G 7 A A 138 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog11 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 138 N3 ? ? A A 8 A G 137 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog12 hydrog ? ? A A 9 N7 ? ? ? 1_555 A G 138 N2 ? ? A A 8 A G 137 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog13 hydrog ? ? A A 10 N6 ? ? ? 1_555 A G 137 N3 ? ? A A 9 A G 136 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A A 10 N7 ? ? ? 1_555 A G 137 N2 ? ? A A 9 A G 136 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog15 hydrog ? ? A G 11 N1 ? ? ? 1_555 A U 136 O2 ? ? A G 10 A U 135 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A G 11 O6 ? ? ? 1_555 A U 136 N3 ? ? A G 10 A U 135 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A A 12 N1 ? ? ? 1_555 A U 135 N3 ? ? A A 11 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 12 N6 ? ? ? 1_555 A U 135 O4 ? ? A A 11 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 134 N1 ? ? A C 12 A G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 134 O6 ? ? A C 12 A G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 134 N2 ? ? A C 12 A G 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 133 N1 ? ? A U 13 A A 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 133 N6 ? ? A U 13 A A 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 15 N1 ? ? ? 1_555 A U 132 O2 ? ? A G 14 A U 131 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A G 15 O6 ? ? ? 1_555 A U 132 N3 ? ? A G 14 A U 131 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? A C 16 N3 ? ? ? 1_555 A G 131 N1 ? ? A C 15 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 16 N4 ? ? ? 1_555 A G 131 O6 ? ? A C 15 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 16 O2 ? ? ? 1_555 A G 131 N2 ? ? A C 15 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 17 N1 ? ? ? 1_555 A U 130 N3 ? ? A A 16 A U 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 17 N6 ? ? ? 1_555 A U 130 O4 ? ? A A 16 A U 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 129 N3 ? ? A G 17 A C 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 129 O2 ? ? A G 17 A C 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 129 N4 ? ? A G 17 A C 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 18 N2 ? ? ? 1_555 A A 206 N3 ? ? A G 17 A A 205 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog35 hydrog ? ? A G 19 N2 ? ? ? 1_555 A A 128 N7 ? ? A G 18 A A 127 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog36 hydrog ? ? A A 20 N7 ? ? ? 1_555 A G 127 N2 ? ? A A 19 A G 126 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog37 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 66 O2 ? ? A G 20 A C 65 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog38 hydrog ? ? A G 21 O6 ? ? ? 1_555 A G 126 N2 ? ? A G 20 A G 125 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog39 hydrog ? ? A A 22 N3 ? ? ? 1_555 A G 86 N2 ? ? A A 21 A G 85 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog40 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 63 N3 ? ? A G 22 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 63 O2 ? ? A G 22 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 63 N4 ? ? A G 22 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 62 N3 ? ? A G 24 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 62 O2 ? ? A G 24 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 62 N4 ? ? A G 24 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 26 N1 ? ? ? 1_555 A C 61 N3 ? ? A G 25 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 26 N2 ? ? ? 1_555 A C 61 O2 ? ? A G 25 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 26 O6 ? ? ? 1_555 A C 61 N4 ? ? A G 25 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 27 N3 ? ? ? 1_555 A A 60 N1 ? ? A U 26 A A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A U 27 O4 ? ? ? 1_555 A A 60 N6 ? ? A U 26 A A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 59 N1 ? ? A U 27 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A U 28 O4 ? ? ? 1_555 A A 59 N6 ? ? A U 27 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 29 N1 ? ? ? 1_555 A U 58 O2 ? ? A G 28 A U 57 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog54 hydrog ? ? A G 29 O6 ? ? ? 1_555 A U 58 N3 ? ? A G 28 A U 57 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog55 hydrog ? ? A U 30 N3 ? ? ? 1_555 A A 57 N1 ? ? A U 29 A A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A U 30 O4 ? ? ? 1_555 A A 57 N6 ? ? A U 29 A A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A U 31 N3 ? ? ? 1_555 A A 56 N1 ? ? A U 30 A A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 31 O4 ? ? ? 1_555 A A 56 N6 ? ? A U 30 A A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 32 N3 ? ? ? 1_555 A A 55 N6 ? ? A A 31 A A 54 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog60 hydrog ? ? A A 33 N1 ? ? ? 1_555 A C 53 N4 ? ? A A 32 A C 52 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog61 hydrog ? ? A C 34 O2 ? ? ? 1_555 A G 52 N1 ? ? A C 33 A G 51 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog62 hydrog ? ? A C 35 N3 ? ? ? 1_555 A G 50 N1 ? ? A C 34 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 35 N4 ? ? ? 1_555 A G 50 O6 ? ? A C 34 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 35 O2 ? ? ? 1_555 A G 50 N2 ? ? A C 34 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 35 O2 ? ? ? 1_555 A A 51 N6 ? ? A C 34 A A 50 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog66 hydrog ? ? A A 36 N1 ? ? ? 1_555 A U 49 N3 ? ? A A 35 A U 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A A 36 N6 ? ? ? 1_555 A U 49 O4 ? ? A A 35 A U 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 37 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 36 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 37 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 36 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 37 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 36 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A A 38 N1 ? ? ? 1_555 A U 47 N3 ? ? A A 37 A U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A A 38 N6 ? ? ? 1_555 A U 47 O4 ? ? A A 37 A U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 39 N3 ? ? ? 1_555 A A 46 N1 ? ? A U 38 A A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A U 39 O4 ? ? ? 1_555 A A 46 N6 ? ? A U 38 A A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A U 41 O2 ? ? ? 1_555 A A 44 N6 ? ? A U 40 A A 43 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog76 hydrog ? ? A G 64 N1 ? ? ? 1_555 A U 87 O2 ? ? A G 63 A U 86 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog77 hydrog ? ? A G 64 O6 ? ? ? 1_555 A U 87 N3 ? ? A G 63 A U 86 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog78 hydrog ? ? A C 65 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 64 A G 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 65 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 64 A G 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 65 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 64 A G 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 66 N3 ? ? ? 1_555 A G 85 N1 ? ? A C 65 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 66 N4 ? ? ? 1_555 A G 85 O6 ? ? A C 65 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 66 O2 ? ? ? 1_555 A G 85 N2 ? ? A C 65 A G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 67 N7 ? ? ? 1_555 A A 84 N6 ? ? A G 66 A A 83 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog85 hydrog ? ? A A 69 N6 ? ? ? 1_555 A A 84 N3 ? ? A A 68 A A 83 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog86 hydrog ? ? A G 70 N1 ? ? ? 1_555 A C 83 N3 ? ? A G 69 A C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 70 N2 ? ? ? 1_555 A C 83 O2 ? ? A G 69 A C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 70 O6 ? ? ? 1_555 A C 83 N4 ? ? A G 69 A C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A A 71 N1 ? ? ? 1_555 A U 81 N3 ? ? A A 70 A U 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A A 71 N6 ? ? ? 1_555 A U 81 O4 ? ? A A 70 A U 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A A 72 N1 ? ? ? 1_555 A U 80 N3 ? ? A A 71 A U 79 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog92 hydrog ? ? A G 73 N1 ? ? ? 1_555 A C 79 N3 ? ? A G 72 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A G 73 N2 ? ? ? 1_555 A C 79 O2 ? ? A G 72 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A G 73 O6 ? ? ? 1_555 A C 79 N4 ? ? A G 72 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A U 74 N3 ? ? ? 1_555 A A 77 N7 ? ? A U 73 A A 76 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog96 hydrog ? ? A U 74 O2 ? ? ? 1_555 A A 77 N6 ? ? A U 73 A A 76 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog97 hydrog ? ? A U 78 N3 ? ? ? 1_555 A A 207 N7 ? ? A U 77 A A 206 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog98 hydrog ? ? A U 78 O4 ? ? ? 1_555 A A 207 N6 ? ? A U 77 A A 206 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog99 hydrog ? ? A G 88 N1 ? ? ? 1_555 A C 123 N3 ? ? A G 87 A C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A G 88 N2 ? ? ? 1_555 A C 123 O2 ? ? A G 87 A C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A G 88 O6 ? ? ? 1_555 A C 123 N4 ? ? A G 87 A C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 89 N3 ? ? ? 1_555 A G 122 N1 ? ? A C 88 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 89 N4 ? ? ? 1_555 A G 122 O6 ? ? A C 88 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A C 89 O2 ? ? ? 1_555 A G 122 N2 ? ? A C 88 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A U 91 N3 ? ? ? 1_555 A A 121 N1 ? ? A U 90 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A U 91 O4 ? ? ? 1_555 A A 121 N6 ? ? A U 90 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A U 92 N3 ? ? ? 1_555 A A 120 N1 ? ? A U 91 A A 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A U 92 O4 ? ? ? 1_555 A A 120 N6 ? ? A U 91 A A 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A A 93 N1 ? ? ? 1_555 A U 119 N3 ? ? A A 92 A U 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A A 93 N6 ? ? ? 1_555 A U 119 O4 ? ? A A 92 A U 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A U 94 N3 ? ? ? 1_555 A A 118 N1 ? ? A U 93 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A U 94 O4 ? ? ? 1_555 A A 118 N6 ? ? A U 93 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A U 95 N3 ? ? ? 1_555 A A 117 N1 ? ? A U 94 A A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A U 95 O4 ? ? ? 1_555 A A 117 N6 ? ? A U 94 A A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A C 96 N3 ? ? ? 1_555 A G 116 N1 ? ? A C 95 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A C 96 N4 ? ? ? 1_555 A G 116 O6 ? ? A C 95 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A C 96 O2 ? ? ? 1_555 A G 116 N2 ? ? A C 95 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A U 97 N3 ? ? ? 1_555 A C 115 N3 ? ? A U 96 A C 114 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog119 hydrog ? ? A U 97 O4 ? ? ? 1_555 A C 115 N4 ? ? A U 96 A C 114 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog120 hydrog ? ? A U 98 N3 ? ? ? 1_555 A A 114 N1 ? ? A U 97 A A 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A U 98 O4 ? ? ? 1_555 A A 114 N6 ? ? A U 97 A A 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A A 99 N3 ? ? ? 1_555 A A 113 N6 ? ? A A 98 A A 112 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog123 hydrog ? ? A G 100 N1 ? ? ? 1_555 A C 112 N3 ? ? A G 99 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A G 100 N2 ? ? ? 1_555 A C 112 O2 ? ? A G 99 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A G 100 O6 ? ? ? 1_555 A C 112 N4 ? ? A G 99 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A C 101 N3 ? ? ? 1_555 A G 111 N1 ? ? A C 100 A G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A C 101 N4 ? ? ? 1_555 A G 111 O6 ? ? A C 100 A G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A C 101 O2 ? ? ? 1_555 A G 111 N2 ? ? A C 100 A G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A C 102 N3 ? ? ? 1_555 A G 110 N1 ? ? A C 101 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A C 102 N4 ? ? ? 1_555 A G 110 O6 ? ? A C 101 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A C 102 O2 ? ? ? 1_555 A G 110 N2 ? ? A C 101 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A A 103 N1 ? ? ? 1_555 A U 109 N3 ? ? A A 102 A U 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A A 103 N6 ? ? ? 1_555 A U 109 O4 ? ? A A 102 A U 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A G 131 N2 ? ? ? 1_555 A A 183 N3 ? ? A G 130 A A 182 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog135 hydrog ? ? A A 143 N6 ? ? ? 1_555 A A 230 N1 ? ? A A 142 A A 229 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog136 hydrog ? ? A C 144 N3 ? ? ? 1_555 A G 229 N1 ? ? A C 143 A G 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A C 144 N4 ? ? ? 1_555 A G 229 O6 ? ? A C 143 A G 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A C 144 O2 ? ? ? 1_555 A G 229 N2 ? ? A C 143 A G 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 145 N3 ? ? ? 1_555 A G 228 N1 ? ? A C 144 A G 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 145 N4 ? ? ? 1_555 A G 228 O6 ? ? A C 144 A G 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A C 145 O2 ? ? ? 1_555 A G 228 N2 ? ? A C 144 A G 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A U 146 N3 ? ? ? 1_555 A A 227 N1 ? ? A U 145 A A 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A U 146 O4 ? ? ? 1_555 A A 227 N6 ? ? A U 145 A A 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A C 147 N3 ? ? ? 1_555 A G 226 N1 ? ? A C 146 A G 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A C 147 N4 ? ? ? 1_555 A G 226 O6 ? ? A C 146 A G 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A C 147 O2 ? ? ? 1_555 A G 226 N2 ? ? A C 146 A G 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A U 148 N3 ? ? ? 1_555 A A 225 N1 ? ? A U 147 A A 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A U 148 O4 ? ? ? 1_555 A A 225 N6 ? ? A U 147 A A 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A G 149 N1 ? ? ? 1_555 A C 224 N3 ? ? A G 148 A C 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A G 149 N2 ? ? ? 1_555 A C 224 O2 ? ? A G 148 A C 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? A G 149 O6 ? ? ? 1_555 A C 224 N4 ? ? A G 148 A C 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? A G 150 N2 ? ? ? 1_555 A A 223 N7 ? ? A G 149 A A 222 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog153 hydrog ? ? A A 151 N7 ? ? ? 1_555 A G 222 N2 ? ? A A 150 A G 221 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog154 hydrog ? ? A G 152 N2 ? ? ? 1_555 A C 173 O2 ? ? A G 151 A C 172 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog155 hydrog ? ? A G 152 O6 ? ? ? 1_555 A G 221 N2 ? ? A G 151 A G 220 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog156 hydrog ? ? A A 153 N3 ? ? ? 1_555 A G 215 N2 ? ? A A 152 A G 214 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog157 hydrog ? ? A G 154 N1 ? ? ? 1_555 A C 170 N3 ? ? A G 153 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? A G 154 N2 ? ? ? 1_555 A C 170 O2 ? ? A G 153 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A G 154 O6 ? ? ? 1_555 A C 170 N4 ? ? A G 153 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? A A 156 N1 ? ? ? 1_555 A U 169 N3 ? ? A A 155 A U 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? A A 156 N6 ? ? ? 1_555 A U 169 O4 ? ? A A 155 A U 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A C 157 N3 ? ? ? 1_555 A G 168 N1 ? ? A C 156 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A C 157 N4 ? ? ? 1_555 A G 168 O6 ? ? A C 156 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A C 157 O2 ? ? ? 1_555 A G 168 N2 ? ? A C 156 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A C 158 N3 ? ? ? 1_555 A G 167 N1 ? ? A C 157 A G 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? A C 158 N4 ? ? ? 1_555 A G 167 O6 ? ? A C 157 A G 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A C 158 O2 ? ? ? 1_555 A G 167 N2 ? ? A C 157 A G 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? A G 159 N1 ? ? ? 1_555 A C 166 N3 ? ? A G 158 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A G 159 N2 ? ? ? 1_555 A C 166 O2 ? ? A G 158 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? A G 159 O6 ? ? ? 1_555 A C 166 N4 ? ? A G 158 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? A U 160 N3 ? ? ? 1_555 A U 165 O4 ? ? A U 159 A U 164 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog172 hydrog ? ? A U 160 O2 ? ? ? 1_555 A U 165 N3 ? ? A U 159 A U 164 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog173 hydrog ? ? A G 171 N1 ? ? ? 1_555 A C 216 N3 ? ? A G 170 A C 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A G 171 N2 ? ? ? 1_555 A C 216 O2 ? ? A G 170 A C 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A G 171 O6 ? ? ? 1_555 A C 216 N4 ? ? A G 170 A C 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A C 172 N3 ? ? ? 1_555 A G 215 N1 ? ? A C 171 A G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? A C 172 N4 ? ? ? 1_555 A G 215 O6 ? ? A C 171 A G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog178 hydrog ? ? A C 172 O2 ? ? ? 1_555 A G 215 N2 ? ? A C 171 A G 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? A C 173 N3 ? ? ? 1_555 A G 214 N1 ? ? A C 172 A G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? A C 173 N4 ? ? ? 1_555 A G 214 O6 ? ? A C 172 A G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog181 hydrog ? ? A C 173 O2 ? ? ? 1_555 A G 214 N2 ? ? A C 172 A G 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog182 hydrog ? ? A G 174 N7 ? ? ? 1_555 A A 213 N6 ? ? A G 173 A A 212 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog183 hydrog ? ? A A 176 N6 ? ? ? 1_555 A A 213 N3 ? ? A A 175 A A 212 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog184 hydrog ? ? A G 177 N1 ? ? ? 1_555 A C 212 N3 ? ? A G 176 A C 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog185 hydrog ? ? A G 177 N2 ? ? ? 1_555 A C 212 O2 ? ? A G 176 A C 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? A G 177 O6 ? ? ? 1_555 A C 212 N4 ? ? A G 176 A C 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A G 178 N1 ? ? ? 1_555 A C 210 N3 ? ? A G 177 A C 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? A G 178 N2 ? ? ? 1_555 A C 210 O2 ? ? A G 177 A C 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? A G 178 O6 ? ? ? 1_555 A C 210 N4 ? ? A G 177 A C 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? A A 179 N1 ? ? ? 1_555 A U 209 N3 ? ? A A 178 A U 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? A A 179 N6 ? ? ? 1_555 A U 209 O4 ? ? A A 178 A U 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? A G 180 N1 ? ? ? 1_555 A C 208 N3 ? ? A G 179 A C 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? A G 180 N2 ? ? ? 1_555 A C 208 O2 ? ? A G 179 A C 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog194 hydrog ? ? A G 180 O6 ? ? ? 1_555 A C 208 N4 ? ? A G 179 A C 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog195 hydrog ? ? A C 181 N3 ? ? ? 1_555 A A 206 N6 ? ? A C 180 A A 205 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog196 hydrog ? ? A C 181 N4 ? ? ? 1_555 A A 206 N7 ? ? A C 180 A A 205 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog197 hydrog ? ? A A 183 N6 ? ? ? 1_555 A G 204 N3 ? ? A A 182 A G 203 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog198 hydrog ? ? A A 183 N7 ? ? ? 1_555 A G 204 N2 ? ? A A 182 A G 203 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog199 hydrog ? ? A G 184 N1 ? ? ? 1_555 A U 203 O2 ? ? A G 183 A U 202 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog200 hydrog ? ? A G 184 O6 ? ? ? 1_555 A U 203 N3 ? ? A G 183 A U 202 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog201 hydrog ? ? A C 185 N3 ? ? ? 1_555 A G 202 N1 ? ? A C 184 A G 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog202 hydrog ? ? A C 185 N4 ? ? ? 1_555 A G 202 O6 ? ? A C 184 A G 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? A C 185 O2 ? ? ? 1_555 A G 202 N2 ? ? A C 184 A G 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog204 hydrog ? ? A U 186 N3 ? ? ? 1_555 A A 201 N1 ? ? A U 185 A A 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog205 hydrog ? ? A U 186 O4 ? ? ? 1_555 A A 201 N6 ? ? A U 185 A A 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog206 hydrog ? ? A C 187 N3 ? ? ? 1_555 A G 200 N1 ? ? A C 186 A G 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog207 hydrog ? ? A C 187 N4 ? ? ? 1_555 A G 200 O6 ? ? A C 186 A G 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog208 hydrog ? ? A C 187 O2 ? ? ? 1_555 A G 200 N2 ? ? A C 186 A G 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog209 hydrog ? ? A U 188 N3 ? ? ? 1_555 A A 199 N1 ? ? A U 187 A A 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog210 hydrog ? ? A U 188 O4 ? ? ? 1_555 A A 199 N6 ? ? A U 187 A A 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog211 hydrog ? ? A G 189 N1 ? ? ? 1_555 A C 198 N3 ? ? A G 188 A C 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog212 hydrog ? ? A G 189 N2 ? ? ? 1_555 A C 198 O2 ? ? A G 188 A C 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog213 hydrog ? ? A G 189 O6 ? ? ? 1_555 A C 198 N4 ? ? A G 188 A C 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog214 hydrog ? ? A C 190 N3 ? ? ? 1_555 A G 197 N1 ? ? A C 189 A G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog215 hydrog ? ? A C 190 N4 ? ? ? 1_555 A G 197 O6 ? ? A C 189 A G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog216 hydrog ? ? A C 190 O2 ? ? ? 1_555 A G 197 N2 ? ? A C 189 A G 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog217 hydrog ? ? A G 191 N2 ? ? ? 1_555 A U 196 O2 ? ? A G 190 A U 195 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O2'" ? A G 67 ? A G 66 ? 1_555 MG ? K MG . ? A MG 310 ? 1_555 OP2 ? A A 68 ? A A 67 ? 1_555 73.1 ? 2 "O2'" ? A G 67 ? A G 66 ? 1_555 MG ? K MG . ? A MG 310 ? 1_555 OP2 ? A C 79 ? A C 78 ? 1_555 156.2 ? 3 OP2 ? A A 68 ? A A 67 ? 1_555 MG ? K MG . ? A MG 310 ? 1_555 OP2 ? A C 79 ? A C 78 ? 1_555 83.4 ? 4 OP1 ? A A 69 ? A A 68 ? 1_555 MG ? M MG . ? A MG 312 ? 1_555 OP2 ? A G 70 ? A G 69 ? 1_555 102.4 ? 5 O4 ? A U 74 ? A U 73 ? 1_555 MG ? E MG . ? A MG 304 ? 1_555 OP2 ? A A 77 ? A A 76 ? 1_555 102.8 ? 6 OP2 ? A C 83 ? A C 82 ? 1_555 MG ? O MG . ? A MG 314 ? 1_555 OP2 ? A A 84 ? A A 83 ? 1_555 110.1 ? 7 "O2'" ? A G 174 ? A G 173 ? 1_555 MG ? H MG . ? A MG 307 ? 1_555 OP2 ? A A 175 ? A A 174 ? 1_555 76.5 ? 8 "O2'" ? A G 174 ? A G 173 ? 1_555 MG ? H MG . ? A MG 307 ? 1_555 OP2 ? A C 208 ? A C 207 ? 1_555 155.7 ? 9 OP2 ? A A 175 ? A A 174 ? 1_555 MG ? H MG . ? A MG 307 ? 1_555 OP2 ? A C 208 ? A C 207 ? 1_555 81.5 ? 10 OP1 ? A A 176 ? A A 175 ? 1_555 MG ? P MG . ? A MG 315 ? 1_555 OP2 ? A G 177 ? A G 176 ? 1_555 88.5 ? 11 OP2 ? A C 212 ? A C 211 ? 1_555 MG ? I MG . ? A MG 308 ? 1_555 OP2 ? A A 213 ? A A 212 ? 1_555 111.0 ? # _pdbx_entry_details.entry_id 9N3I _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9N3I _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 6WLT _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id A _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 6WLT _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9N3I _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.86 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 215269 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '25mM MES (pH 6.0), 10mM MgCl2, 2mM Glycine' _em_buffer.pH 6.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Holo structure of the glycine riboswitch with 10mM Magnesium and 2mM Glycine' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9N3I _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2300 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details 15mA _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9N3I _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9N3I _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9N3I _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G 0 ? A G 1 2 1 Y 1 A U 231 ? A U 232 3 1 Y 1 A G 232 ? A G 233 4 1 Y 1 A A 233 ? A A 234 5 1 Y 1 A A 234 ? A A 235 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GLY N N N N 111 GLY CA C N N 112 GLY C C N N 113 GLY O O N N 114 GLY OXT O N N 115 GLY H H N N 116 GLY H2 H N N 117 GLY HA2 H N N 118 GLY HA3 H N N 119 GLY HXT H N N 120 MG MG MG N N 121 U OP3 O N N 122 U P P N N 123 U OP1 O N N 124 U OP2 O N N 125 U "O5'" O N N 126 U "C5'" C N N 127 U "C4'" C N R 128 U "O4'" O N N 129 U "C3'" C N S 130 U "O3'" O N N 131 U "C2'" C N R 132 U "O2'" O N N 133 U "C1'" C N R 134 U N1 N N N 135 U C2 C N N 136 U O2 O N N 137 U N3 N N N 138 U C4 C N N 139 U O4 O N N 140 U C5 C N N 141 U C6 C N N 142 U HOP3 H N N 143 U HOP2 H N N 144 U "H5'" H N N 145 U "H5''" H N N 146 U "H4'" H N N 147 U "H3'" H N N 148 U "HO3'" H N N 149 U "H2'" H N N 150 U "HO2'" H N N 151 U "H1'" H N N 152 U H3 H N N 153 U H5 H N N 154 U H6 H N N 155 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GLY N CA sing N N 116 GLY N H sing N N 117 GLY N H2 sing N N 118 GLY CA C sing N N 119 GLY CA HA2 sing N N 120 GLY CA HA3 sing N N 121 GLY C O doub N N 122 GLY C OXT sing N N 123 GLY OXT HXT sing N N 124 U OP3 P sing N N 125 U OP3 HOP3 sing N N 126 U P OP1 doub N N 127 U P OP2 sing N N 128 U P "O5'" sing N N 129 U OP2 HOP2 sing N N 130 U "O5'" "C5'" sing N N 131 U "C5'" "C4'" sing N N 132 U "C5'" "H5'" sing N N 133 U "C5'" "H5''" sing N N 134 U "C4'" "O4'" sing N N 135 U "C4'" "C3'" sing N N 136 U "C4'" "H4'" sing N N 137 U "O4'" "C1'" sing N N 138 U "C3'" "O3'" sing N N 139 U "C3'" "C2'" sing N N 140 U "C3'" "H3'" sing N N 141 U "O3'" "HO3'" sing N N 142 U "C2'" "O2'" sing N N 143 U "C2'" "C1'" sing N N 144 U "C2'" "H2'" sing N N 145 U "O2'" "HO2'" sing N N 146 U "C1'" N1 sing N N 147 U "C1'" "H1'" sing N N 148 U N1 C2 sing N N 149 U N1 C6 sing N N 150 U C2 O2 doub N N 151 U C2 N3 sing N N 152 U N3 C4 sing N N 153 U N3 H3 sing N N 154 U C4 O4 doub N N 155 U C4 C5 sing N N 156 U C5 C6 doub N N 157 U C5 H5 sing N N 158 U C6 H6 sing N N 159 # _em_admin.current_status REL _em_admin.deposition_date 2025-01-31 _em_admin.deposition_site RCSB _em_admin.entry_id 9N3I _em_admin.last_update 2026-07-29 _em_admin.map_release_date 2026-07-29 _em_admin.title 'Vibrio cholerae Glycine Riboswitch - glycine bound at 2.9A resolution' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 25 mM ? 1 MES 1 2 mM ? 2 Glycine 1 10 mM MgCl2 3 'Magnesium Chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value .0757 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 666 _em_entity_assembly_naturalsource.organism 'Vibrio cholerae' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 59 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 5338 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 476789 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.6.0 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.6.0 ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot 0.9.8.95 ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? CLASSIFICATION ? 11 1 ? ? cryoSPARC 4.6.0 ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC 4.6.0 ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.21.1_5286 ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration 1.2 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9N3I 'double helix' 9N3I 'a-form double helix' 9N3I 'hairpin loop' 9N3I 'bulge loop' 9N3I 'mismatched base pair' 9N3I 'internal loop' 9N3I 'triple helix' 9N3I 'three-way junction' 9N3I 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 140 1_555 A C 4 1_555 0.249 0.083 -0.559 -5.389 9.416 0.530 1 A_G139:C3_A A 139 ? A 3 ? 19 1 1 A G 141 1_555 A C 3 1_555 -0.080 -0.219 -0.213 -10.160 -10.292 -3.106 2 A_G140:C2_A A 140 ? A 2 ? 19 1 1 A A 142 1_555 A U 2 1_555 -0.178 0.133 -0.283 -24.890 -19.126 -2.720 3 A_A141:U1_A A 141 ? A 1 ? 20 1 1 A A 143 1_555 A A 230 1_555 -2.612 1.551 0.277 37.843 -26.358 -0.339 4 A_A142:A229_A A 142 ? A 229 ? ? 1 1 A C 144 1_555 A G 229 1_555 -0.266 -0.013 -0.442 20.577 -21.844 -2.625 5 A_C143:G228_A A 143 ? A 228 ? 19 1 1 A C 145 1_555 A G 228 1_555 0.085 -0.119 -0.119 9.302 -19.890 0.699 6 A_C144:G227_A A 144 ? A 227 ? 19 1 1 A U 146 1_555 A A 227 1_555 -0.140 0.066 0.029 6.213 -12.376 0.262 7 A_U145:A226_A A 145 ? A 226 ? 20 1 1 A C 147 1_555 A G 226 1_555 -0.050 -0.016 -0.042 7.067 -12.668 0.943 8 A_C146:G225_A A 146 ? A 225 ? 19 1 1 A U 148 1_555 A A 225 1_555 -0.144 0.012 0.032 6.082 -3.882 7.168 9 A_U147:A224_A A 147 ? A 224 ? 20 1 1 A G 149 1_555 A C 224 1_555 -0.158 -0.082 -0.165 -3.622 -5.853 -0.007 10 A_G148:C223_A A 148 ? A 223 ? 19 1 1 A G 150 1_555 A A 223 1_555 7.445 -5.190 0.471 15.229 -6.372 -24.975 11 A_G149:A222_A A 149 ? A 222 ? ? ? 1 A A 151 1_555 A G 222 1_555 -7.074 -5.092 1.444 -19.887 -21.532 -17.558 12 A_A150:G221_A A 150 ? A 221 ? ? ? 1 A G 152 1_555 A G 221 1_555 -4.758 1.532 1.101 -7.102 -15.897 -30.267 13 A_G151:G220_A A 151 ? A 220 ? ? ? 1 A G 8 1_555 A A 139 1_555 6.776 -4.792 0.773 20.559 18.326 -1.077 14 A_G7:A138_A A 7 ? A 138 ? 11 10 1 A A 9 1_555 A G 138 1_555 -6.483 -5.394 0.783 -30.359 12.318 -7.498 15 A_A8:G137_A A 8 ? A 137 ? 11 10 1 A A 10 1_555 A G 137 1_555 -6.848 -3.991 -0.334 3.990 1.095 3.474 16 A_A9:G136_A A 9 ? A 136 ? 11 9 1 A G 11 1_555 A U 136 1_555 -2.257 -0.590 -0.604 1.976 -12.593 -3.782 17 A_G10:U135_A A 10 ? A 135 ? 28 1 1 A A 12 1_555 A U 135 1_555 0.168 -0.008 -0.169 -4.754 -7.563 -5.120 18 A_A11:U134_A A 11 ? A 134 ? 20 1 1 A C 13 1_555 A G 134 1_555 -0.055 -0.093 -0.252 6.744 -16.493 0.883 19 A_C12:G133_A A 12 ? A 133 ? 19 1 1 A U 14 1_555 A A 133 1_555 0.001 -0.044 -0.364 4.529 -13.718 3.530 20 A_U13:A132_A A 13 ? A 132 ? 20 1 1 A G 15 1_555 A U 132 1_555 -2.533 -0.482 -0.185 0.097 -16.244 0.068 21 A_G14:U131_A A 14 ? A 131 ? 28 1 1 A C 16 1_555 A G 131 1_555 0.041 0.006 -0.237 10.947 -12.845 -0.981 22 A_C15:G130_A A 15 ? A 130 ? 19 1 1 A A 17 1_555 A U 130 1_555 -0.100 0.039 -0.056 0.095 -11.816 13.388 23 A_A16:U129_A A 16 ? A 129 ? 20 1 1 A G 18 1_555 A C 129 1_555 -0.083 -0.150 -0.717 -8.061 -8.318 0.123 24 A_G17:C128_A A 17 ? A 128 ? 19 1 1 A G 19 1_555 A A 128 1_555 7.754 -5.480 0.637 6.758 -8.589 -35.709 25 A_G18:A127_A A 18 ? A 127 ? ? ? 1 A A 20 1_555 A G 127 1_555 -6.995 -5.138 1.704 -14.714 -17.535 -16.661 26 A_A19:G126_A A 19 ? A 126 ? ? ? 1 A G 21 1_555 A G 126 1_555 -4.807 1.264 1.074 -4.221 -15.159 -24.227 27 A_G20:G125_A A 20 ? A 125 ? ? ? 1 A A 44 1_555 A U 41 1_555 -6.572 -4.290 -0.160 -23.670 -32.929 -20.283 28 A_A43:U40_A A 43 ? A 40 ? ? 6 1 A A 46 1_555 A U 39 1_555 0.269 0.075 0.336 -8.957 -9.657 -0.171 29 A_A45:U38_A A 45 ? A 38 ? 20 1 1 A U 47 1_555 A A 38 1_555 -0.219 0.000 0.017 13.530 -23.655 -4.300 30 A_U46:A37_A A 46 ? A 37 ? 20 1 1 A C 48 1_555 A G 37 1_555 0.478 -0.111 -0.034 15.323 -25.387 2.506 31 A_C47:G36_A A 47 ? A 36 ? 19 1 1 A U 49 1_555 A A 36 1_555 0.404 -0.131 -0.017 6.198 -13.875 4.508 32 A_U48:A35_A A 48 ? A 35 ? 20 1 1 A G 50 1_555 A C 35 1_555 -0.337 -0.104 -0.899 -20.979 -30.168 12.378 33 A_G49:C34_A A 49 ? A 34 ? 19 1 1 A G 52 1_555 A C 34 1_555 -3.968 -0.092 -0.409 19.099 -10.318 36.407 34 A_G51:C33_A A 51 ? A 33 ? ? 5 1 A C 53 1_555 A A 33 1_555 -1.046 0.191 -0.310 -0.674 -39.744 24.615 35 A_C52:A32_A A 52 ? A 32 ? ? 1 1 A A 55 1_555 A A 32 1_555 -6.072 -3.843 -0.318 -7.888 4.283 -9.288 36 A_A54:A31_A A 54 ? A 31 ? ? 9 1 A A 56 1_555 A U 31 1_555 0.178 -0.047 -0.276 -12.651 -2.342 -2.609 37 A_A55:U30_A A 55 ? A 30 ? 20 1 1 A A 57 1_555 A U 30 1_555 0.196 0.013 0.008 -7.508 -17.199 -5.456 38 A_A56:U29_A A 56 ? A 29 ? 20 1 1 A U 58 1_555 A G 29 1_555 2.392 -0.482 0.209 -6.405 -13.844 4.068 39 A_U57:G28_A A 57 ? A 28 ? 28 1 1 A A 59 1_555 A U 28 1_555 -0.173 -0.140 0.132 5.988 -4.262 1.843 40 A_A58:U27_A A 58 ? A 27 ? 20 1 1 A A 60 1_555 A U 27 1_555 0.210 -0.007 0.212 22.336 -12.103 -5.011 41 A_A59:U26_A A 59 ? A 26 ? 20 1 1 A C 61 1_555 A G 26 1_555 0.359 -0.001 0.064 19.291 -13.624 0.212 42 A_C60:G25_A A 60 ? A 25 ? 19 1 1 A C 62 1_555 A G 25 1_555 0.521 -0.281 0.150 6.440 -7.153 -1.996 43 A_C61:G24_A A 61 ? A 24 ? 19 1 1 A C 63 1_555 A G 23 1_555 0.395 -0.096 0.779 10.390 -14.677 0.898 44 A_C62:G22_A A 62 ? A 22 ? 19 1 1 A G 64 1_555 A U 87 1_555 -2.036 -0.370 0.483 16.130 -14.270 -0.823 45 A_G63:U86_A A 63 ? A 86 ? 28 1 1 A C 65 1_555 A G 86 1_555 -0.082 -0.003 0.194 12.349 -26.749 2.348 46 A_C64:G85_A A 64 ? A 85 ? 19 1 1 A C 66 1_555 A G 85 1_555 0.134 0.020 0.151 -4.257 -17.380 1.357 47 A_C65:G84_A A 65 ? A 84 ? 19 1 1 A G 67 1_555 A A 84 1_555 2.580 -5.924 0.139 9.689 -2.131 121.038 48 A_G66:A83_A A 66 ? A 83 ? ? 3 1 A G 70 1_555 A C 83 1_555 -0.538 -0.226 -0.226 0.130 8.139 -5.403 49 A_G69:C82_A A 69 ? A 82 ? 19 1 1 A A 71 1_555 A U 81 1_555 0.307 0.012 0.015 16.486 -21.410 -3.690 50 A_A70:U80_A A 70 ? A 80 ? 20 1 1 A A 72 1_555 A U 80 1_555 -0.649 0.359 -0.111 3.491 -39.072 29.292 51 A_A71:U79_A A 71 ? A 79 ? ? 1 1 A G 73 1_555 A C 79 1_555 -0.079 -0.124 -0.242 -5.953 -15.907 -6.962 52 A_G72:C78_A A 72 ? A 78 ? 19 1 1 A U 74 1_555 A A 77 1_555 4.823 -3.036 -0.727 28.125 -7.993 -80.475 53 A_U73:A76_A A 73 ? A 76 ? 24 4 1 A U 78 1_555 A A 207 1_555 -0.259 3.447 -0.096 12.041 16.605 -61.846 54 A_U77:A206_A A 77 ? A 206 ? 23 3 1 A G 88 1_555 A C 123 1_555 -0.791 -0.234 0.527 6.738 -3.464 0.553 55 A_G87:C122_A A 87 ? A 122 ? 19 1 1 A C 89 1_555 A G 122 1_555 -0.001 0.018 -0.193 7.067 -6.237 -0.833 56 A_C88:G121_A A 88 ? A 121 ? 19 1 1 A U 91 1_555 A A 121 1_555 -0.082 -0.042 -0.017 -0.751 -5.159 -0.860 57 A_U90:A120_A A 90 ? A 120 ? 20 1 1 A U 92 1_555 A A 120 1_555 -0.166 -0.180 -0.020 5.785 -16.686 -0.078 58 A_U91:A119_A A 91 ? A 119 ? 20 1 1 A A 93 1_555 A U 119 1_555 -0.189 -0.104 -0.080 -7.140 -10.343 8.145 59 A_A92:U118_A A 92 ? A 118 ? 20 1 1 A U 94 1_555 A A 118 1_555 0.131 -0.126 -0.014 5.586 -21.645 -0.042 60 A_U93:A117_A A 93 ? A 117 ? 20 1 1 A U 95 1_555 A A 117 1_555 0.162 -0.067 -0.832 19.072 -19.881 -6.420 61 A_U94:A116_A A 94 ? A 116 ? 20 1 1 A C 96 1_555 A G 116 1_555 0.576 -0.321 -0.164 12.858 -16.561 0.636 62 A_C95:G115_A A 95 ? A 115 ? 19 1 1 A U 97 1_555 A C 115 1_555 -0.125 -1.619 0.351 10.376 -19.755 9.720 63 A_U96:C114_A A 96 ? A 114 ? 18 1 1 A U 98 1_555 A A 114 1_555 0.506 -0.163 -0.618 -2.526 -34.350 16.963 64 A_U97:A113_A A 97 ? A 113 ? 20 1 1 A A 99 1_555 A A 113 1_555 5.878 -0.735 -0.836 5.849 -32.216 45.449 65 A_A98:A112_A A 98 ? A 112 ? ? ? 1 A G 100 1_555 A C 112 1_555 -0.186 -0.120 -0.817 -23.944 -17.147 7.064 66 A_G99:C111_A A 99 ? A 111 ? 19 1 1 A C 101 1_555 A G 111 1_555 0.119 -0.037 -0.051 4.721 -1.327 -0.473 67 A_C100:G110_A A 100 ? A 110 ? 19 1 1 A C 102 1_555 A G 110 1_555 0.288 -0.155 0.213 8.966 -23.829 -0.458 68 A_C101:G109_A A 101 ? A 109 ? 19 1 1 A A 103 1_555 A U 109 1_555 0.397 0.099 0.105 7.031 -13.551 -2.058 69 A_A102:U108_A A 102 ? A 108 ? 20 1 1 A U 165 1_555 A U 160 1_555 -2.925 -2.008 0.515 -4.801 -20.999 10.156 70 A_U164:U159_A A 164 ? A 159 ? 16 1 1 A C 166 1_555 A G 159 1_555 0.373 -0.337 0.311 0.522 -17.481 -7.146 71 A_C165:G158_A A 165 ? A 158 ? 19 1 1 A G 167 1_555 A C 158 1_555 -0.319 -0.165 0.218 -0.281 -4.772 3.258 72 A_G166:C157_A A 166 ? A 157 ? 19 1 1 A G 168 1_555 A C 157 1_555 -0.448 -0.325 0.734 2.374 -4.374 -3.422 73 A_G167:C156_A A 167 ? A 156 ? 19 1 1 A U 169 1_555 A A 156 1_555 -0.160 0.092 0.605 -7.685 -11.427 -9.988 74 A_U168:A155_A A 168 ? A 155 ? 20 1 1 A C 170 1_555 A G 154 1_555 0.153 0.028 0.215 -3.444 -5.716 2.692 75 A_C169:G153_A A 169 ? A 153 ? 19 1 1 A G 171 1_555 A C 216 1_555 -0.229 -0.049 0.196 3.234 -9.926 2.297 76 A_G170:C215_A A 170 ? A 215 ? 19 1 1 A C 172 1_555 A G 215 1_555 0.036 0.041 0.067 10.639 -26.234 5.103 77 A_C171:G214_A A 171 ? A 214 ? 19 1 1 A C 173 1_555 A G 214 1_555 0.025 -0.092 -0.019 -3.572 -15.113 -0.393 78 A_C172:G213_A A 172 ? A 213 ? 19 1 1 A G 174 1_555 A A 213 1_555 2.521 -5.947 0.556 7.194 -5.577 119.460 79 A_G173:A212_A A 173 ? A 212 ? ? 3 1 A G 177 1_555 A C 212 1_555 -0.316 -0.153 -0.719 -1.682 6.879 -7.126 80 A_G176:C211_A A 176 ? A 211 ? 19 1 1 A G 178 1_555 A C 210 1_555 0.119 0.015 0.263 12.946 -10.513 -2.297 81 A_G177:C209_A A 177 ? A 209 ? 19 1 1 A A 179 1_555 A U 209 1_555 -0.337 0.059 0.134 9.198 -28.267 15.279 82 A_A178:U208_A A 178 ? A 208 ? 20 1 1 A G 180 1_555 A C 208 1_555 0.066 -0.083 0.209 -10.303 -22.933 -2.152 83 A_G179:C207_A A 179 ? A 207 ? 19 1 1 A C 181 1_555 A A 206 1_555 3.261 -0.315 -0.248 16.707 -5.570 -89.311 84 A_C180:A205_A A 180 ? A 205 ? 25 4 1 A A 183 1_555 A G 204 1_555 -6.972 -4.789 0.945 8.702 -10.888 -8.830 85 A_A182:G203_A A 182 ? A 203 ? 11 10 1 A G 184 1_555 A U 203 1_555 -2.466 -0.547 0.054 15.333 -8.270 1.433 86 A_G183:U202_A A 183 ? A 202 ? 28 1 1 A C 185 1_555 A G 202 1_555 -0.132 0.091 -0.285 18.159 -15.407 3.185 87 A_C184:G201_A A 184 ? A 201 ? 19 1 1 A U 186 1_555 A A 201 1_555 0.265 -0.010 0.304 3.170 -11.382 -0.866 88 A_U185:A200_A A 185 ? A 200 ? 20 1 1 A C 187 1_555 A G 200 1_555 0.105 -0.179 0.325 -5.198 -3.401 1.496 89 A_C186:G199_A A 186 ? A 199 ? 19 1 1 A U 188 1_555 A A 199 1_555 0.251 -0.152 -0.140 2.137 -11.868 1.804 90 A_U187:A198_A A 187 ? A 198 ? 20 1 1 A G 189 1_555 A C 198 1_555 0.049 -0.260 -0.460 -8.037 -19.677 -1.240 91 A_G188:C197_A A 188 ? A 197 ? 19 1 1 A C 190 1_555 A G 197 1_555 0.431 -0.147 -0.079 9.185 -7.666 5.061 92 A_C189:G196_A A 189 ? A 196 ? 19 1 1 A G 191 1_555 A U 196 1_555 -2.017 0.305 0.269 19.626 8.065 22.190 93 A_G190:U195_A A 190 ? A 195 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 140 1_555 A C 4 1_555 A G 141 1_555 A C 3 1_555 -0.135 -1.895 3.379 -1.814 5.843 28.010 -5.116 -0.128 2.934 11.893 3.693 28.658 1 AA_G139G140:C2C3_AA A 139 ? A 3 ? A 140 ? A 2 ? 1 A G 141 1_555 A C 3 1_555 A A 142 1_555 A U 2 1_555 0.222 -1.656 3.588 -1.613 12.100 37.569 -3.915 -0.523 2.926 18.209 2.428 39.434 2 AA_G140A141:U1C2_AA A 140 ? A 2 ? A 141 ? A 1 ? 1 A A 142 1_555 A U 2 1_555 A A 143 1_555 A A 230 1_555 1.916 -1.680 2.891 -28.959 -1.635 36.059 -2.051 -4.225 1.183 -2.249 39.823 45.972 3 AA_A141A142:A229U1_AA A 141 ? A 1 ? A 142 ? A 229 ? 1 A A 143 1_555 A A 230 1_555 A C 144 1_555 A G 229 1_555 -0.157 -1.353 3.766 -3.613 2.552 40.195 -2.285 -0.235 3.677 3.700 5.238 40.428 4 AA_A142C143:G228A229_AA A 142 ? A 229 ? A 143 ? A 228 ? 1 A C 144 1_555 A G 229 1_555 A C 145 1_555 A G 228 1_555 0.043 -1.805 3.565 -4.735 11.003 38.156 -3.932 -0.618 2.929 16.347 7.034 39.925 5 AA_C143C144:G227G228_AA A 143 ? A 228 ? A 144 ? A 227 ? 1 A C 145 1_555 A G 228 1_555 A U 146 1_555 A A 227 1_555 -0.415 -1.802 3.405 -1.865 5.813 28.407 -4.859 0.421 3.005 11.676 3.746 29.042 6 AA_C144U145:A226G227_AA A 144 ? A 227 ? A 145 ? A 226 ? 1 A U 146 1_555 A A 227 1_555 A C 147 1_555 A G 226 1_555 0.156 -1.550 3.187 0.230 8.500 32.647 -3.940 -0.234 2.711 14.810 -0.401 33.707 7 AA_U145C146:G225A226_AA A 145 ? A 226 ? A 146 ? A 225 ? 1 A C 147 1_555 A G 226 1_555 A U 148 1_555 A A 225 1_555 0.457 -1.581 3.359 -1.492 8.848 29.421 -4.642 -1.142 2.752 16.931 2.855 30.730 8 AA_C146U147:A224G225_AA A 146 ? A 225 ? A 147 ? A 224 ? 1 A U 148 1_555 A A 225 1_555 A G 149 1_555 A C 224 1_555 -0.804 -1.923 3.350 0.725 16.414 31.836 -5.241 1.404 2.119 27.735 -1.226 35.728 9 AA_U147G148:C223A224_AA A 147 ? A 224 ? A 148 ? A 223 ? 1 A G 149 1_555 A C 224 1_555 A G 150 1_555 A A 223 1_555 -1.714 -1.210 3.011 0.612 7.001 65.796 -1.362 1.593 2.870 6.425 -0.562 66.128 10 AA_G148G149:A222C223_AA A 148 ? A 223 ? A 149 ? A 222 ? 1 A G 150 1_555 A A 223 1_555 A A 151 1_555 A G 222 1_555 0.576 0.286 5.882 -2.730 9.709 -30.643 -3.623 0.164 5.564 -17.778 -4.998 -32.222 11 AA_G149A150:G221A222_AA A 149 ? A 222 ? A 150 ? A 221 ? 1 A A 151 1_555 A G 222 1_555 A G 152 1_555 A G 221 1_555 -0.793 -0.928 3.256 2.305 3.078 47.315 -1.397 1.168 3.153 3.828 -2.867 47.462 12 AA_A150G151:G220G221_AA A 150 ? A 221 ? A 151 ? A 220 ? 1 A G 8 1_555 A A 139 1_555 A A 9 1_555 A G 138 1_555 -1.250 -1.633 4.630 -6.192 -11.558 -15.663 10.806 -6.847 2.266 35.387 -18.958 -20.401 13 AA_G7A8:G137A138_AA A 7 ? A 138 ? A 8 ? A 137 ? 1 A A 9 1_555 A G 138 1_555 A A 10 1_555 A G 137 1_555 -0.214 -0.249 2.733 -12.925 7.618 31.086 -1.421 -1.336 2.498 13.288 22.545 34.437 14 AA_A8A9:G136G137_AA A 8 ? A 137 ? A 9 ? A 136 ? 1 A A 10 1_555 A G 137 1_555 A G 11 1_555 A U 136 1_555 -0.018 -0.957 3.448 -5.322 6.478 57.901 -1.333 -0.271 3.323 6.652 5.466 58.453 15 AA_A9G10:U135G136_AA A 9 ? A 136 ? A 10 ? A 135 ? 1 A G 11 1_555 A U 136 1_555 A A 12 1_555 A U 135 1_555 -0.707 -1.777 3.510 -6.389 3.271 37.692 -3.143 0.222 3.420 5.007 9.780 38.345 16 AA_G10A11:U134U135_AA A 10 ? A 135 ? A 11 ? A 134 ? 1 A A 12 1_555 A U 135 1_555 A C 13 1_555 A G 134 1_555 0.223 -1.460 2.954 1.370 3.592 31.853 -3.211 -0.187 2.784 6.516 -2.485 32.078 17 AA_A11C12:G133U134_AA A 11 ? A 134 ? A 12 ? A 133 ? 1 A C 13 1_555 A G 134 1_555 A U 14 1_555 A A 133 1_555 -0.024 -1.369 3.390 0.607 10.245 30.202 -4.307 0.151 2.787 18.986 -1.124 31.860 18 AA_C12U13:A132G133_AA A 12 ? A 133 ? A 13 ? A 132 ? 1 A U 14 1_555 A A 133 1_555 A G 15 1_555 A U 132 1_555 -0.103 -1.725 3.102 -4.546 18.490 22.629 -6.437 -0.546 1.339 39.352 9.675 29.493 19 AA_U13G14:U131A132_AA A 13 ? A 132 ? A 14 ? A 131 ? 1 A G 15 1_555 A U 132 1_555 A C 16 1_555 A G 131 1_555 -0.287 -1.214 3.032 -2.486 6.333 40.845 -2.329 0.166 2.833 8.999 3.532 41.384 20 AA_G14C15:G130U131_AA A 14 ? A 131 ? A 15 ? A 130 ? 1 A C 16 1_555 A G 131 1_555 A A 17 1_555 A U 130 1_555 0.964 -1.808 3.564 -2.108 15.275 28.174 -5.884 -2.106 2.236 28.811 3.977 32.043 21 AA_C15A16:U129G130_AA A 15 ? A 130 ? A 16 ? A 129 ? 1 A A 17 1_555 A U 130 1_555 A G 18 1_555 A C 129 1_555 -1.174 -1.720 3.457 0.768 13.885 31.030 -5.057 2.128 2.457 24.471 -1.354 33.934 22 AA_A16G17:C128U129_AA A 16 ? A 129 ? A 17 ? A 128 ? 1 A G 18 1_555 A C 129 1_555 A G 19 1_555 A A 128 1_555 -2.638 -1.498 3.099 -3.321 11.751 65.631 -1.797 2.279 2.940 10.744 3.037 66.632 23 AA_G17G18:A127C128_AA A 17 ? A 128 ? A 18 ? A 127 ? 1 A G 19 1_555 A A 128 1_555 A A 20 1_555 A G 127 1_555 1.160 0.086 5.584 -5.673 6.025 -31.890 -1.938 0.365 5.594 -10.741 -10.115 -32.919 24 AA_G18A19:G126A127_AA A 18 ? A 127 ? A 19 ? A 126 ? 1 A A 20 1_555 A G 127 1_555 A G 21 1_555 A G 126 1_555 -0.818 -1.037 3.366 4.409 3.491 44.257 -1.688 1.486 3.188 4.611 -5.824 44.595 25 AA_A19G20:G125G126_AA A 19 ? A 126 ? A 20 ? A 125 ? 1 A A 44 1_555 A U 41 1_555 A A 46 1_555 A U 39 1_555 0.880 -1.133 5.400 -1.135 41.518 86.900 -2.010 -0.633 4.652 28.861 0.789 94.499 26 AA_A43A45:U38U40_AA A 43 ? A 40 ? A 45 ? A 38 ? 1 A A 46 1_555 A U 39 1_555 A U 47 1_555 A A 38 1_555 -0.383 -0.965 2.924 1.203 0.194 28.305 -2.010 1.030 2.899 0.396 -2.458 28.331 27 AA_A45U46:A37U38_AA A 45 ? A 38 ? A 46 ? A 37 ? 1 A U 47 1_555 A A 38 1_555 A C 48 1_555 A G 37 1_555 0.571 -0.990 3.213 1.549 10.340 35.947 -2.834 -0.698 2.852 16.333 -2.447 37.388 28 AA_U46C47:G36A37_AA A 46 ? A 37 ? A 47 ? A 36 ? 1 A C 48 1_555 A G 37 1_555 A U 49 1_555 A A 36 1_555 0.671 -1.801 3.495 0.977 13.159 31.087 -5.174 -1.004 2.563 23.281 -1.728 33.708 29 AA_C47U48:A35G36_AA A 47 ? A 36 ? A 48 ? A 35 ? 1 A U 49 1_555 A A 36 1_555 A G 50 1_555 A C 35 1_555 -0.182 -1.299 4.213 7.386 16.877 22.787 -6.836 2.225 2.514 36.079 -15.790 29.225 30 AA_U48G49:C34A35_AA A 48 ? A 35 ? A 49 ? A 34 ? 1 A G 50 1_555 A C 35 1_555 A G 52 1_555 A C 34 1_555 -1.069 0.429 2.771 2.160 18.972 34.086 -1.376 1.834 2.582 29.658 -3.377 38.931 31 AA_G49G51:C33C34_AA A 49 ? A 34 ? A 51 ? A 33 ? 1 A G 52 1_555 A C 34 1_555 A C 53 1_555 A A 33 1_555 -0.481 -0.929 3.712 -0.432 7.084 43.440 -1.986 0.596 3.530 9.495 0.580 43.988 32 AA_G51C52:A32C33_AA A 51 ? A 33 ? A 52 ? A 32 ? 1 A C 53 1_555 A A 33 1_555 A A 55 1_555 A A 32 1_555 -2.569 -4.083 3.962 -3.167 23.751 23.493 -10.053 4.070 0.185 45.782 6.104 33.436 33 AA_C52A54:A31A32_AA A 52 ? A 32 ? A 54 ? A 31 ? 1 A A 55 1_555 A A 32 1_555 A A 56 1_555 A U 31 1_555 0.282 -0.873 3.649 -0.640 6.040 62.456 -1.139 -0.303 3.557 5.810 0.616 62.721 34 AA_A54A55:U30A31_AA A 54 ? A 31 ? A 55 ? A 30 ? 1 A A 56 1_555 A U 31 1_555 A A 57 1_555 A U 30 1_555 -0.202 -1.375 3.253 0.555 1.642 31.186 -2.861 0.478 3.174 3.052 -1.031 31.233 35 AA_A55A56:U29U30_AA A 55 ? A 30 ? A 56 ? A 29 ? 1 A A 57 1_555 A U 30 1_555 A U 58 1_555 A G 29 1_555 0.764 -1.245 3.159 3.406 11.540 42.855 -2.638 -0.718 2.800 15.433 -4.555 44.435 36 AA_A56U57:G28U29_AA A 56 ? A 29 ? A 57 ? A 28 ? 1 A U 58 1_555 A G 29 1_555 A A 59 1_555 A U 28 1_555 -0.015 -1.596 2.525 2.667 11.889 20.747 -6.309 0.592 1.402 29.913 -6.710 24.027 37 AA_U57A58:U27G28_AA A 57 ? A 28 ? A 58 ? A 27 ? 1 A A 59 1_555 A U 28 1_555 A A 60 1_555 A U 27 1_555 -0.329 -1.236 2.807 0.281 2.199 29.563 -2.808 0.693 2.707 4.302 -0.549 29.644 38 AA_A58A59:U26U27_AA A 58 ? A 27 ? A 59 ? A 26 ? 1 A A 60 1_555 A U 27 1_555 A C 61 1_555 A G 26 1_555 0.476 -1.642 3.346 0.185 5.177 33.447 -3.645 -0.788 3.068 8.928 -0.319 33.835 39 AA_A59C60:G25U26_AA A 59 ? A 26 ? A 60 ? A 25 ? 1 A C 61 1_555 A G 26 1_555 A C 62 1_555 A G 25 1_555 -0.263 -2.067 3.548 -2.062 4.028 32.689 -4.357 0.097 3.287 7.115 3.641 32.993 40 AA_C60C61:G24G25_AA A 60 ? A 25 ? A 61 ? A 24 ? 1 A C 62 1_555 A G 25 1_555 A C 63 1_555 A G 23 1_555 0.328 -2.284 3.028 -5.964 6.166 31.945 -4.906 -1.438 2.457 10.958 10.600 33.048 41 AA_C61C62:G22G24_AA A 61 ? A 24 ? A 62 ? A 22 ? 1 A C 63 1_555 A G 23 1_555 A G 64 1_555 A U 87 1_555 1.833 -1.866 3.056 -5.333 0.656 37.152 -2.978 -3.470 2.744 1.023 8.317 37.525 42 AA_C62G63:U86G22_AA A 62 ? A 22 ? A 63 ? A 86 ? 1 A G 64 1_555 A U 87 1_555 A C 65 1_555 A G 86 1_555 -0.092 -1.453 3.388 -2.133 0.471 41.535 -2.098 -0.104 3.372 0.664 3.005 41.590 43 AA_G63C64:G85U86_AA A 63 ? A 86 ? A 64 ? A 85 ? 1 A C 65 1_555 A G 86 1_555 A C 66 1_555 A G 85 1_555 -0.381 -1.667 3.705 -0.037 5.161 35.953 -3.466 0.605 3.441 8.309 0.060 36.309 44 AA_C64C65:G84G85_AA A 64 ? A 85 ? A 65 ? A 84 ? 1 A C 66 1_555 A G 85 1_555 A G 67 1_555 A A 84 1_555 0.014 -3.205 0.684 -165.003 6.346 162.667 -1.605 -0.057 0.655 3.176 82.585 177.765 45 AA_C65G66:A83G84_AA A 65 ? A 84 ? A 66 ? A 83 ? 1 A G 67 1_555 A A 84 1_555 A G 70 1_555 A C 83 1_555 -5.550 1.843 -3.533 101.135 -141.461 -2.091 -0.471 -2.456 4.661 73.168 52.310 -173.896 46 AA_G66G69:C82A83_AA A 66 ? A 83 ? A 69 ? A 82 ? 1 A G 70 1_555 A C 83 1_555 A A 71 1_555 A U 81 1_555 2.537 -2.088 3.070 -4.526 6.427 48.830 -2.911 -3.326 2.563 7.716 5.433 49.420 47 AA_G69A70:U80C82_AA A 69 ? A 82 ? A 70 ? A 80 ? 1 A A 71 1_555 A U 81 1_555 A A 72 1_555 A U 80 1_555 1.148 -0.890 3.603 4.708 15.184 30.037 -4.138 -1.160 2.969 27.046 -8.387 33.899 48 AA_A70A71:U79U80_AA A 70 ? A 80 ? A 71 ? A 79 ? 1 A A 72 1_555 A U 80 1_555 A G 73 1_555 A C 79 1_555 -1.780 -0.707 3.576 -6.791 16.014 39.521 -2.709 1.686 3.313 22.412 9.505 43.039 49 AA_A71G72:C78U79_AA A 71 ? A 79 ? A 72 ? A 78 ? 1 A G 73 1_555 A C 79 1_555 A U 74 1_555 A A 77 1_555 -1.411 -1.221 2.804 5.606 4.089 68.774 -1.201 1.415 2.629 3.611 -4.950 69.081 50 AA_G72U73:A76C78_AA A 72 ? A 78 ? A 73 ? A 76 ? 1 A G 88 1_555 A C 123 1_555 A C 89 1_555 A G 122 1_555 0.084 -2.058 3.195 6.982 0.405 36.799 -3.258 0.764 3.136 0.635 -10.938 37.435 51 AA_G87C88:G121C122_AA A 87 ? A 122 ? A 88 ? A 121 ? 1 A C 89 1_555 A G 122 1_555 A U 91 1_555 A A 121 1_555 -0.867 -2.412 5.566 26.718 8.139 38.962 -4.024 4.475 3.734 10.698 -35.118 47.621 52 AA_C88U90:A120G121_AA A 88 ? A 121 ? A 90 ? A 120 ? 1 A U 91 1_555 A A 121 1_555 A U 92 1_555 A A 120 1_555 0.571 -1.743 2.990 3.499 4.106 24.697 -5.040 -0.405 2.723 9.455 -8.058 25.271 53 AA_U90U91:A119A120_AA A 90 ? A 120 ? A 91 ? A 119 ? 1 A U 92 1_555 A A 120 1_555 A A 93 1_555 A U 119 1_555 0.245 -1.575 3.249 1.478 27.758 31.528 -4.634 -0.214 1.464 42.269 -2.250 41.797 54 AA_U91A92:U118A119_AA A 91 ? A 119 ? A 92 ? A 118 ? 1 A A 93 1_555 A U 119 1_555 A U 94 1_555 A A 118 1_555 -0.704 -0.855 2.997 0.818 8.359 33.745 -2.561 1.290 2.698 14.130 -1.383 34.745 55 AA_A92U93:A117U118_AA A 92 ? A 118 ? A 93 ? A 117 ? 1 A U 94 1_555 A A 118 1_555 A U 95 1_555 A A 117 1_555 -0.227 -0.762 2.874 5.400 3.183 32.585 -1.796 1.181 2.718 5.607 -9.514 33.166 56 AA_U93U94:A116A117_AA A 93 ? A 117 ? A 94 ? A 116 ? 1 A U 95 1_555 A A 117 1_555 A C 96 1_555 A G 116 1_555 0.498 -1.326 3.452 -1.872 12.091 31.340 -4.236 -1.163 2.735 21.389 3.312 33.588 57 AA_U94C95:G115A116_AA A 94 ? A 116 ? A 95 ? A 115 ? 1 A C 96 1_555 A G 116 1_555 A U 97 1_555 A C 115 1_555 0.604 -1.213 3.493 -4.389 5.846 27.852 -3.773 -2.216 3.051 11.888 8.925 28.777 58 AA_C95U96:C114G115_AA A 95 ? A 115 ? A 96 ? A 114 ? 1 A U 97 1_555 A C 115 1_555 A U 98 1_555 A A 114 1_555 0.926 0.105 3.755 13.144 24.658 31.228 -3.057 0.407 3.187 37.724 -20.109 41.671 59 AA_U96U97:A113C114_AA A 96 ? A 114 ? A 97 ? A 113 ? 1 A U 98 1_555 A A 114 1_555 A A 99 1_555 A A 113 1_555 -0.226 2.359 3.500 10.276 13.833 64.208 1.526 0.677 3.813 12.775 -9.490 66.241 60 AA_U97A98:A112A113_AA A 97 ? A 113 ? A 98 ? A 112 ? 1 A A 99 1_555 A A 113 1_555 A G 100 1_555 A C 112 1_555 -1.845 -0.587 3.847 -4.268 23.928 0.633 -9.804 2.880 -0.153 87.155 15.546 24.314 61 AA_A98G99:C111A112_AA A 98 ? A 112 ? A 99 ? A 111 ? 1 A G 100 1_555 A C 112 1_555 A C 101 1_555 A G 111 1_555 -0.251 0.080 2.844 -7.540 10.412 25.545 -1.941 -1.015 2.644 21.870 15.837 28.549 62 AA_G99C100:G110C111_AA A 99 ? A 111 ? A 100 ? A 110 ? 1 A C 101 1_555 A G 111 1_555 A C 102 1_555 A G 110 1_555 -0.281 -0.919 3.511 0.062 16.555 27.594 -4.645 0.520 2.564 31.384 -0.117 32.096 63 AA_C100C101:G109G110_AA A 100 ? A 110 ? A 101 ? A 109 ? 1 A C 102 1_555 A G 110 1_555 A A 103 1_555 A U 109 1_555 -0.853 0.080 3.911 5.662 33.984 33.732 -3.203 1.602 2.755 46.264 -7.708 47.855 64 AA_C101A102:U108G109_AA A 101 ? A 109 ? A 102 ? A 108 ? 1 A U 165 1_555 A U 160 1_555 A C 166 1_555 A G 159 1_555 -0.558 -0.597 3.191 0.601 4.162 47.606 -1.057 0.735 3.124 5.144 -0.743 47.781 65 AA_U164C165:G158U159_AA A 164 ? A 159 ? A 165 ? A 158 ? 1 A C 166 1_555 A G 159 1_555 A G 167 1_555 A C 158 1_555 0.028 -1.663 2.952 -1.387 14.619 25.763 -5.652 -0.282 1.768 29.893 2.835 29.592 66 AA_C165G166:C157G158_AA A 165 ? A 158 ? A 166 ? A 157 ? 1 A G 167 1_555 A C 158 1_555 A G 168 1_555 A C 157 1_555 -0.537 -1.860 3.095 -3.655 -2.405 29.545 -3.121 0.298 3.274 -4.684 7.118 29.860 67 AA_G166G167:C156C157_AA A 166 ? A 157 ? A 167 ? A 156 ? 1 A G 168 1_555 A C 157 1_555 A U 169 1_555 A A 156 1_555 -0.389 -1.927 3.412 0.459 6.985 37.591 -3.815 0.651 3.015 10.726 -0.705 38.214 68 AA_G167U168:A155C156_AA A 167 ? A 156 ? A 168 ? A 155 ? 1 A U 169 1_555 A A 156 1_555 A C 170 1_555 A G 154 1_555 -0.215 -1.332 3.065 3.379 1.391 26.524 -3.210 1.272 2.943 3.014 -7.320 26.770 69 AA_U168C169:G153A155_AA A 168 ? A 155 ? A 169 ? A 153 ? 1 A C 170 1_555 A G 154 1_555 A G 171 1_555 A C 216 1_555 0.432 -1.800 3.051 -5.566 9.315 32.887 -4.250 -1.457 2.367 15.922 9.514 34.584 70 AA_C169G170:C215G153_AA A 169 ? A 153 ? A 170 ? A 215 ? 1 A G 171 1_555 A C 216 1_555 A C 172 1_555 A G 215 1_555 0.452 -1.875 3.110 0.816 2.209 33.084 -3.632 -0.663 2.992 3.874 -1.430 33.165 71 AA_G170C171:G214C215_AA A 170 ? A 215 ? A 171 ? A 214 ? 1 A C 172 1_555 A G 215 1_555 A C 173 1_555 A G 214 1_555 -0.624 -1.778 3.798 -1.192 3.133 33.445 -3.659 0.858 3.640 5.428 2.065 33.607 72 AA_C171C172:G213G214_AA A 171 ? A 214 ? A 172 ? A 213 ? 1 A C 173 1_555 A G 214 1_555 A G 174 1_555 A A 213 1_555 0.137 -3.242 0.542 -165.588 6.080 147.552 -1.625 -0.139 0.450 3.051 83.076 176.014 73 AA_C172G173:A212G213_AA A 172 ? A 213 ? A 173 ? A 212 ? 1 A G 174 1_555 A A 213 1_555 A G 177 1_555 A C 212 1_555 -2.958 -2.259 -5.912 99.292 -143.101 112.521 -2.466 0.552 -4.824 -71.953 -49.925 176.766 74 AA_G173G176:C211A212_AA A 173 ? A 212 ? A 176 ? A 211 ? 1 A G 177 1_555 A C 212 1_555 A G 178 1_555 A C 210 1_555 2.723 -2.186 2.938 -9.796 8.097 48.696 -3.024 -3.751 2.024 9.631 11.651 50.229 75 AA_G176G177:C209C211_AA A 176 ? A 211 ? A 177 ? A 209 ? 1 A G 178 1_555 A C 210 1_555 A A 179 1_555 A U 209 1_555 0.701 -1.356 3.303 1.829 8.850 32.190 -3.771 -0.928 2.874 15.581 -3.220 33.402 76 AA_G177A178:U208C209_AA A 177 ? A 209 ? A 178 ? A 208 ? 1 A A 179 1_555 A U 209 1_555 A G 180 1_555 A C 208 1_555 -0.887 -1.236 3.751 -0.402 11.721 40.397 -3.064 1.191 3.292 16.556 0.568 41.996 77 AA_A178G179:C207U208_AA A 178 ? A 208 ? A 179 ? A 207 ? 1 A G 180 1_555 A C 208 1_555 A C 181 1_555 A A 206 1_555 -2.721 -1.117 3.073 5.198 5.687 58.812 -1.387 2.987 2.737 5.764 -5.269 59.270 78 AA_G179C180:A205C207_AA A 179 ? A 207 ? A 180 ? A 205 ? 1 A A 183 1_555 A G 204 1_555 A G 184 1_555 A U 203 1_555 0.679 -0.894 3.268 -6.483 14.095 52.157 -1.807 -1.125 2.859 15.642 7.195 54.261 79 AA_A182G183:U202G203_AA A 182 ? A 203 ? A 183 ? A 202 ? 1 A G 184 1_555 A U 203 1_555 A C 185 1_555 A G 202 1_555 -0.052 -1.361 3.208 -0.427 6.168 39.692 -2.649 0.029 2.972 9.018 0.624 40.152 80 AA_G183C184:G201U202_AA A 183 ? A 202 ? A 184 ? A 201 ? 1 A C 185 1_555 A G 202 1_555 A U 186 1_555 A A 201 1_555 -0.125 -1.856 3.736 -3.975 6.869 34.960 -4.095 -0.421 3.318 11.254 6.513 35.822 81 AA_C184U185:A200G201_AA A 184 ? A 201 ? A 185 ? A 200 ? 1 A U 186 1_555 A A 201 1_555 A C 187 1_555 A G 200 1_555 0.078 -1.777 3.419 0.135 6.998 30.263 -4.646 -0.120 2.944 13.183 -0.254 31.043 82 AA_U185C186:G199A200_AA A 185 ? A 200 ? A 186 ? A 199 ? 1 A C 187 1_555 A G 200 1_555 A U 188 1_555 A A 199 1_555 0.286 -1.504 2.901 4.689 8.316 33.591 -3.568 0.120 2.485 14.041 -7.918 34.884 83 AA_C186U187:A198G199_AA A 186 ? A 199 ? A 187 ? A 198 ? 1 A U 188 1_555 A A 199 1_555 A G 189 1_555 A C 198 1_555 -0.408 -1.342 3.451 3.609 14.570 30.982 -4.471 1.236 2.525 25.486 -6.313 34.347 84 AA_U187G188:C197A198_AA A 187 ? A 198 ? A 188 ? A 197 ? 1 A G 189 1_555 A C 198 1_555 A C 190 1_555 A G 197 1_555 0.630 -0.802 2.771 -2.416 6.955 31.639 -2.430 -1.473 2.489 12.545 4.358 32.464 85 AA_G188C189:G196C197_AA A 188 ? A 197 ? A 189 ? A 196 ? 1 A C 190 1_555 A G 197 1_555 A G 191 1_555 A U 196 1_555 2.039 -2.144 3.296 -8.292 -7.516 18.902 -2.712 -8.581 2.808 -20.701 22.836 21.941 86 AA_C189G190:U195G196_AA A 189 ? A 196 ? A 190 ? A 195 ? # _pdbx_audit_support.funding_organization 'Department of Energy (DOE, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 20230044DR _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6WLT _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9N3I _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MG N O P # loop_ #