HEADER DNA BINDING PROTEIN 31-JAN-25 9N3X TITLE CRYSTAL STRUCTURE OF ANTI-CRISPR ACRIE7 DETERMINED BY EXPERIMENTAL MAD TITLE 2 PHASING WITH HG COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACRIE7; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: HMS174(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: 2C-T KEYWDS ACR, CRISPR, ANTI-CRISPR, PHAGE, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR O.REDMAN,R.N.JACKSON REVDAT 1 04-FEB-26 9N3X 0 JRNL AUTH O.REDMAN,A.WILLIAMS,R.N.JACKSON JRNL TITL DETERMINING THE STRUCTURE AND FUNCTION OF TYPE IV-A JRNL TITL 2 ANTI-CRISPRS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.88) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.289 REMARK 3 FREE R VALUE TEST SET COUNT : 1784 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2289 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2524 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 352 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.42100 REMARK 3 B22 (A**2) : 0.42100 REMARK 3 B33 (A**2) : -1.36500 REMARK 3 B12 (A**2) : 0.21000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.172 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2566 ; 0.015 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2462 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3468 ; 2.434 ; 1.799 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5658 ; 0.818 ; 1.753 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 5.831 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 23 ;14.849 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 456 ;15.704 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 398 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3053 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 607 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 571 ; 0.243 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 68 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1339 ; 0.198 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 230 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.332 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1281 ; 2.101 ; 1.522 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1281 ; 2.096 ; 1.521 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1596 ; 3.123 ; 2.705 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1597 ; 3.124 ; 2.708 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1285 ; 3.188 ; 1.854 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1284 ; 3.132 ; 1.851 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1872 ; 4.795 ; 3.237 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1873 ; 4.793 ; 3.240 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 0 A 106 NULL REMARK 3 1 B 0 B 106 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 2 A 0 A 106 NULL REMARK 3 2 C 0 C 106 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 3 B 0 B 106 NULL REMARK 3 3 C 0 C 106 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 35.4737 29.0172 16.5594 REMARK 3 T TENSOR REMARK 3 T11: 0.0091 T22: 0.0495 REMARK 3 T33: 0.0243 T12: -0.0158 REMARK 3 T13: -0.0041 T23: 0.0228 REMARK 3 L TENSOR REMARK 3 L11: 2.6354 L22: 1.6605 REMARK 3 L33: 1.5288 L12: -1.2845 REMARK 3 L13: -0.6798 L23: -0.1038 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: -0.1593 S13: -0.1484 REMARK 3 S21: 0.0542 S22: 0.0224 S23: 0.1485 REMARK 3 S31: -0.0122 S32: -0.0490 S33: -0.0126 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 106 REMARK 3 ORIGIN FOR THE GROUP (A): 37.2712 39.0422 -33.9177 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.2067 REMARK 3 T33: 0.0885 T12: 0.0244 REMARK 3 T13: 0.0697 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.8199 L22: 3.5981 REMARK 3 L33: 1.6852 L12: -0.4024 REMARK 3 L13: -0.2662 L23: 0.2643 REMARK 3 S TENSOR REMARK 3 S11: 0.0471 S12: -0.2849 S13: 0.1909 REMARK 3 S21: 0.2968 S22: 0.0089 S23: 0.4269 REMARK 3 S31: -0.0295 S32: -0.0582 S33: -0.0560 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 106 REMARK 3 ORIGIN FOR THE GROUP (A): 35.4780 33.0643 -9.6678 REMARK 3 T TENSOR REMARK 3 T11: 0.0451 T22: 0.0933 REMARK 3 T33: 0.0224 T12: 0.0449 REMARK 3 T13: -0.0152 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 2.5805 L22: 2.2515 REMARK 3 L33: 2.1835 L12: 0.7485 REMARK 3 L13: 1.3329 L23: 0.9493 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: 0.1044 S13: 0.0368 REMARK 3 S21: -0.2537 S22: -0.0998 S23: 0.1753 REMARK 3 S31: -0.1188 S32: 0.0223 S33: 0.0884 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9N3X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1000292457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9753, 1.0070, 1.0088, 1.0108 REMARK 200 MONOCHROMATOR : SINGLE SILICON CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.8.2, POINTLESS 1.13.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33732 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.198 REMARK 200 RESOLUTION RANGE LOW (A) : 49.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 39.80 REMARK 200 R MERGE (I) : 0.33400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 6.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 20.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 40.87 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXCD, SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: LARGE HEXAGONAL PRISMS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M NA MALONATE (PH 8.0), 0.1M HEPES REMARK 280 (PH 7.5) CRYSTALS SOAKED IN MOTHER LIQUOR CONTAINING 1MM HGCL2 REMARK 280 OVERNIGHT BEFORE BACKSOAKING IN CRYOPROTECTANT (2.6M NA MALONATE) REMARK 280 AND PLUNGE FREEZING, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 93.85650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 93.85650 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.85650 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 93.85650 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 93.85650 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 93.85650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -287.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 108.10200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 54.05100 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 93.61908 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -279.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 108.10200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 54.05100 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 93.61908 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 54.05100 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 93.61908 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -93.85650 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 108.10200 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -93.85650 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -93.85650 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 432 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 341 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 404 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 406 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 413 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 ILE C 2 CG1 CG2 CD1 REMARK 470 GLU C 104 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 16 CD GLU B 16 OE1 0.086 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 37 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 93 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 37 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 76 CB - CA - C ANGL. DEV. = -19.6 DEGREES REMARK 500 ARG B 76 CG - CD - NE ANGL. DEV. = -27.6 DEGREES REMARK 500 ARG B 93 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG C 43 CG - CD - NE ANGL. DEV. = 15.9 DEGREES REMARK 500 ARG C 75 CG - CD - NE ANGL. DEV. = 15.6 DEGREES REMARK 500 ARG C 75 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG C 76 CB - CA - C ANGL. DEV. = -19.4 DEGREES REMARK 500 ARG C 76 CG - CD - NE ANGL. DEV. = -28.6 DEGREES REMARK 500 ARG C 93 CD - NE - CZ ANGL. DEV. = 11.4 DEGREES REMARK 500 ARG C 93 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG C 93 NE - CZ - NH2 ANGL. DEV. = -8.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS B 80 37.09 -140.66 REMARK 500 ASP B 105 35.90 -90.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 76 0.11 SIDE CHAIN REMARK 500 ARG B 30 0.08 SIDE CHAIN REMARK 500 ARG B 76 0.12 SIDE CHAIN REMARK 500 ARG C 30 0.13 SIDE CHAIN REMARK 500 ARG C 75 0.12 SIDE CHAIN REMARK 500 ARG C 76 0.12 SIDE CHAIN REMARK 500 ARG C 93 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG C 76 13.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 201 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 53 NE2 REMARK 620 2 HOH A 377 O 146.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 202 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 76 O REMARK 620 2 CYS A 80 SG 98.4 REMARK 620 3 HOH A 404 O 64.5 138.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 202 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 80 SG REMARK 620 2 HOH B 379 O 114.5 REMARK 620 3 HOH B 402 O 103.0 101.6 REMARK 620 N 1 2 DBREF 9N3X A 0 106 PDB 9N3X 9N3X 0 106 DBREF 9N3X B 0 106 PDB 9N3X 9N3X 0 106 DBREF 9N3X C 0 106 PDB 9N3X 9N3X 0 106 SEQRES 1 A 107 SER MET ILE GLY SER GLU LYS GLN VAL ASN TRP ALA LYS SEQRES 2 A 107 SER ILE ILE GLU LYS GLU VAL GLU ALA TRP GLU ALA ILE SEQRES 3 A 107 GLY VAL ASP VAL ARG GLU VAL ALA ALA PHE LEU ARG SER SEQRES 4 A 107 ILE SER ASP ALA ARG VAL ILE ILE ASP ASN ARG ASN LEU SEQRES 5 A 107 ILE HIS PHE GLN SER SER GLY ILE SER TYR SER LEU GLU SEQRES 6 A 107 SER SER PRO LEU ASN SER PRO ILE PHE LEU ARG ARG PHE SEQRES 7 A 107 SER ALA CYS SER VAL GLY PHE GLU GLU ILE PRO THR ALA SEQRES 8 A 107 LEU GLN ARG ILE ARG SER VAL TYR THR ALA LYS LEU LEU SEQRES 9 A 107 GLU ASP GLU SEQRES 1 B 107 SER MET ILE GLY SER GLU LYS GLN VAL ASN TRP ALA LYS SEQRES 2 B 107 SER ILE ILE GLU LYS GLU VAL GLU ALA TRP GLU ALA ILE SEQRES 3 B 107 GLY VAL ASP VAL ARG GLU VAL ALA ALA PHE LEU ARG SER SEQRES 4 B 107 ILE SER ASP ALA ARG VAL ILE ILE ASP ASN ARG ASN LEU SEQRES 5 B 107 ILE HIS PHE GLN SER SER GLY ILE SER TYR SER LEU GLU SEQRES 6 B 107 SER SER PRO LEU ASN SER PRO ILE PHE LEU ARG ARG PHE SEQRES 7 B 107 SER ALA CYS SER VAL GLY PHE GLU GLU ILE PRO THR ALA SEQRES 8 B 107 LEU GLN ARG ILE ARG SER VAL TYR THR ALA LYS LEU LEU SEQRES 9 B 107 GLU ASP GLU SEQRES 1 C 107 SER MET ILE GLY SER GLU LYS GLN VAL ASN TRP ALA LYS SEQRES 2 C 107 SER ILE ILE GLU LYS GLU VAL GLU ALA TRP GLU ALA ILE SEQRES 3 C 107 GLY VAL ASP VAL ARG GLU VAL ALA ALA PHE LEU ARG SER SEQRES 4 C 107 ILE SER ASP ALA ARG VAL ILE ILE ASP ASN ARG ASN LEU SEQRES 5 C 107 ILE HIS PHE GLN SER SER GLY ILE SER TYR SER LEU GLU SEQRES 6 C 107 SER SER PRO LEU ASN SER PRO ILE PHE LEU ARG ARG PHE SEQRES 7 C 107 SER ALA CYS SER VAL GLY PHE GLU GLU ILE PRO THR ALA SEQRES 8 C 107 LEU GLN ARG ILE ARG SER VAL TYR THR ALA LYS LEU LEU SEQRES 9 C 107 GLU ASP GLU HET HG A 201 1 HET HG A 202 1 HET HG B 201 1 HET HG B 202 1 HET HG C 201 1 HET HG C 202 1 HETNAM HG MERCURY (II) ION FORMUL 4 HG 6(HG 2+) FORMUL 10 HOH *352(H2 O) HELIX 1 AA1 SER A 4 ALA A 24 1 21 HELIX 2 AA2 VAL A 29 ILE A 39 1 11 HELIX 3 AA3 ASP A 41 ASN A 48 1 8 HELIX 4 AA4 GLY A 58 SER A 66 1 9 HELIX 5 AA5 PRO A 67 ASN A 69 5 3 HELIX 6 AA6 SER A 70 ARG A 75 1 6 HELIX 7 AA7 ARG A 76 SER A 78 5 3 HELIX 8 AA8 GLY A 83 GLU A 85 5 3 HELIX 9 AA9 GLU A 86 ASP A 105 1 20 HELIX 10 AB1 SER B 4 ALA B 24 1 21 HELIX 11 AB2 VAL B 29 ILE B 39 1 11 HELIX 12 AB3 ASP B 41 ASN B 48 1 8 HELIX 13 AB4 GLY B 58 SER B 66 1 9 HELIX 14 AB5 PRO B 67 ASN B 69 5 3 HELIX 15 AB6 SER B 70 ARG B 75 1 6 HELIX 16 AB7 ARG B 76 SER B 78 5 3 HELIX 17 AB8 GLY B 83 GLU B 85 5 3 HELIX 18 AB9 GLU B 86 ASP B 105 1 20 HELIX 19 AC1 SER C 4 ILE C 25 1 22 HELIX 20 AC2 VAL C 29 ILE C 39 1 11 HELIX 21 AC3 ASP C 41 ASN C 48 1 8 HELIX 22 AC4 GLY C 58 SER C 66 1 9 HELIX 23 AC5 PRO C 67 ASN C 69 5 3 HELIX 24 AC6 SER C 70 ARG C 75 1 6 HELIX 25 AC7 ARG C 76 SER C 78 5 3 HELIX 26 AC8 GLY C 83 GLU C 85 5 3 HELIX 27 AC9 GLU C 86 GLU C 106 1 21 LINK NE2 HIS A 53 HG HG A 201 1555 1555 2.63 LINK O ARG A 76 HG HG A 202 1555 1555 3.02 LINK SG CYS A 80 HG HG A 202 1555 1555 2.43 LINK HG HG A 201 O HOH A 377 1555 1555 3.18 LINK HG HG A 202 O HOH A 404 1555 1555 2.90 LINK SG CYS B 80 HG HG B 202 1555 1555 2.53 LINK HG HG B 202 O HOH B 379 1555 1555 2.95 LINK HG HG B 202 O HOH B 402 1555 1555 3.04 LINK NE2 HIS C 53 HG HG C 202 1555 1555 2.59 LINK SG CYS C 80 HG HG C 201 1555 1555 2.46 CRYST1 108.102 108.102 187.713 90.00 90.00 120.00 P 63 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009251 0.005341 0.000000 0.00000 SCALE2 0.000000 0.010682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005327 0.00000 CONECT 859 5063 CONECT 1194 5064 CONECT 1261 5064 CONECT 2955 5066 CONECT 4227 5068 CONECT 4644 5067 CONECT 5063 859 5145 CONECT 5064 1194 1261 5172 CONECT 5066 2955 5280 5303 CONECT 5067 4644 CONECT 5068 4227 CONECT 5145 5063 CONECT 5172 5064 CONECT 5280 5066 CONECT 5303 5066 MASTER 539 0 6 27 0 0 0 6 2882 3 15 27 END