HEADER DNA BINDING PROTEIN/DNA 17-FEB-25 9NCR TITLE ISORETICULAR, POROUS CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN TITLE 2 REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE TITLE 3 REPE54 SEQUENCE AND ADDITIONAL G/C RICH EXPANSION SEQUENCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (31-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (31-MER); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: REPLICATION INITIATION PROTEIN; COMPND 11 CHAIN: C; COMPND 12 SYNONYM: PROTEIN E,PROTEIN REP,PROTEIN F4, REPLICATION INITIATOR COMPND 13 PROTEIN REPE54; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: REPLICATION INITIATOR PROTEIN REPE54 WITH N-TERMINAL COMPND 16 6XHIS-TAG SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 4 ORGANISM_TAXID: 562; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 8 ORGANISM_TAXID: 562; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 GENE: REPE, E, REP, ECOK12F045; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS DNA, PROTEIN, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.T.SHIELDS,C.D.SNOW,C.K.SLAUGHTER REVDAT 1 18-FEB-26 9NCR 0 JRNL AUTH E.T.SHIELDS,C.K.SLAUGHTER,F.MEKKAOUI,E.N.MAGNA,C.SHEPHERD, JRNL AUTH 2 P.S.LUKEMAN,D.E.SPRATT,C.D.SNOW JRNL TITL MODULAR SCAFFOLD CRYSTALS FOR PROGRAMMABLE INSTALLATION AND JRNL TITL 2 STRUCTURAL OBSERVATION OF DNA-BINDING PROTEINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 20000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.7600 - 7.7800 0.94 1291 141 0.1546 0.1329 REMARK 3 2 7.7800 - 6.1900 0.99 1334 151 0.2095 0.2120 REMARK 3 3 6.1900 - 5.4100 0.99 1314 153 0.2095 0.2427 REMARK 3 4 5.4100 - 4.9200 0.99 1347 141 0.2106 0.2370 REMARK 3 5 4.9200 - 4.5600 0.99 1301 146 0.1915 0.2331 REMARK 3 6 4.5600 - 4.3000 0.98 1316 146 0.2125 0.2841 REMARK 3 7 4.3000 - 4.0800 0.98 1292 144 0.2217 0.2513 REMARK 3 8 4.0800 - 3.9000 0.98 1291 139 0.2346 0.2713 REMARK 3 9 3.9000 - 3.7500 0.98 1292 143 0.2755 0.3297 REMARK 3 10 3.7500 - 3.6200 0.97 1298 148 0.2947 0.3069 REMARK 3 11 3.6200 - 3.5100 0.97 1303 131 0.3110 0.3126 REMARK 3 12 3.5100 - 3.4100 0.92 1216 148 0.3604 0.3654 REMARK 3 13 3.4100 - 3.3200 0.92 1194 133 0.3919 0.4185 REMARK 3 14 3.3200 - 3.2400 0.91 1217 130 0.4211 0.4611 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.492 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.233 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 104.6 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 179.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3259 REMARK 3 ANGLE : 0.669 4680 REMARK 3 CHIRALITY : 0.040 514 REMARK 3 PLANARITY : 0.006 384 REMARK 3 DIHEDRAL : 26.406 1347 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -5 THROUGH 4 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8737 -27.9714 9.5573 REMARK 3 T TENSOR REMARK 3 T11: 3.2350 T22: 2.3727 REMARK 3 T33: 2.3538 T12: 0.4607 REMARK 3 T13: 0.9352 T23: -1.5274 REMARK 3 L TENSOR REMARK 3 L11: 1.9766 L22: 2.1173 REMARK 3 L33: 0.2940 L12: 1.9311 REMARK 3 L13: 0.4441 L23: 0.2205 REMARK 3 S TENSOR REMARK 3 S11: -0.7475 S12: -1.1811 S13: 1.2435 REMARK 3 S21: 1.0846 S22: 0.6643 S23: -0.0480 REMARK 3 S31: -1.8587 S32: -0.9426 S33: -0.2826 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6562 -46.2275 -21.0051 REMARK 3 T TENSOR REMARK 3 T11: 2.3502 T22: 1.9407 REMARK 3 T33: 1.9468 T12: -0.1178 REMARK 3 T13: 1.4497 T23: -0.8262 REMARK 3 L TENSOR REMARK 3 L11: 5.7795 L22: 0.2164 REMARK 3 L33: 2.5027 L12: -0.7384 REMARK 3 L13: -1.3560 L23: -0.3386 REMARK 3 S TENSOR REMARK 3 S11: 1.2213 S12: 1.4254 S13: 0.8805 REMARK 3 S21: -0.9635 S22: -0.3275 S23: -1.0299 REMARK 3 S31: -1.1979 S32: -0.1162 S33: -0.7447 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6837 -73.8906 -36.1747 REMARK 3 T TENSOR REMARK 3 T11: 3.2812 T22: 2.9149 REMARK 3 T33: 2.6059 T12: 0.0132 REMARK 3 T13: 0.5745 T23: -1.5213 REMARK 3 L TENSOR REMARK 3 L11: 3.1910 L22: 9.1246 REMARK 3 L33: 9.3840 L12: 4.7736 REMARK 3 L13: 4.2474 L23: 6.2856 REMARK 3 S TENSOR REMARK 3 S11: 0.7228 S12: 0.2808 S13: -0.6021 REMARK 3 S21: 0.0322 S22: -0.3851 S23: -0.7992 REMARK 3 S31: 1.1620 S32: -0.3766 S33: -0.4387 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4287 -80.3962 -46.6219 REMARK 3 T TENSOR REMARK 3 T11: 2.3517 T22: 2.6123 REMARK 3 T33: 3.4606 T12: -0.1645 REMARK 3 T13: 1.2434 T23: -1.3388 REMARK 3 L TENSOR REMARK 3 L11: 4.0402 L22: 5.7108 REMARK 3 L33: 3.4023 L12: -4.7800 REMARK 3 L13: 1.8451 L23: -1.8061 REMARK 3 S TENSOR REMARK 3 S11: -0.5463 S12: -0.2435 S13: -0.9595 REMARK 3 S21: 1.5997 S22: -0.3052 S23: 2.4724 REMARK 3 S31: 0.4352 S32: -2.1332 S33: 1.0239 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8631 -58.0860 -29.2738 REMARK 3 T TENSOR REMARK 3 T11: 2.4033 T22: 2.4562 REMARK 3 T33: 1.9888 T12: 0.0868 REMARK 3 T13: 0.9295 T23: -1.2047 REMARK 3 L TENSOR REMARK 3 L11: 1.0549 L22: 0.5506 REMARK 3 L33: 2.5233 L12: 0.4854 REMARK 3 L13: -1.3452 L23: -1.1371 REMARK 3 S TENSOR REMARK 3 S11: 0.8066 S12: 1.5090 S13: -0.2002 REMARK 3 S21: -1.4827 S22: 0.0238 S23: -0.7458 REMARK 3 S31: -0.4946 S32: 0.8296 S33: -0.4456 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2767 -28.9238 6.3821 REMARK 3 T TENSOR REMARK 3 T11: 3.2317 T22: 1.9983 REMARK 3 T33: 2.5950 T12: 0.2494 REMARK 3 T13: 1.3710 T23: -0.8849 REMARK 3 L TENSOR REMARK 3 L11: 6.6700 L22: 1.1356 REMARK 3 L33: 8.9563 L12: -2.2176 REMARK 3 L13: -3.1768 L23: 2.7883 REMARK 3 S TENSOR REMARK 3 S11: -0.4076 S12: -1.0992 S13: 1.2537 REMARK 3 S21: 1.1158 S22: 0.7556 S23: -0.0596 REMARK 3 S31: -0.8027 S32: -1.2602 S33: 0.0479 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 15 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8024 -68.6027 -11.9722 REMARK 3 T TENSOR REMARK 3 T11: 1.3172 T22: 1.1158 REMARK 3 T33: 1.8564 T12: -0.2302 REMARK 3 T13: 0.5666 T23: -0.9449 REMARK 3 L TENSOR REMARK 3 L11: 7.9200 L22: 1.8510 REMARK 3 L33: 5.9202 L12: -1.6588 REMARK 3 L13: -2.3657 L23: 0.1369 REMARK 3 S TENSOR REMARK 3 S11: 0.2390 S12: 0.3644 S13: -1.7795 REMARK 3 S21: -0.8107 S22: -0.0298 S23: 0.3405 REMARK 3 S31: 0.3077 S32: 0.1936 S33: 0.5829 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 114 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6339 -73.9432 -9.2634 REMARK 3 T TENSOR REMARK 3 T11: 1.2895 T22: 1.2337 REMARK 3 T33: 2.5507 T12: 0.0655 REMARK 3 T13: 0.6064 T23: -0.4713 REMARK 3 L TENSOR REMARK 3 L11: 9.9914 L22: 0.2098 REMARK 3 L33: 6.7348 L12: -0.9538 REMARK 3 L13: -5.7243 L23: -0.0968 REMARK 3 S TENSOR REMARK 3 S11: 0.0497 S12: -0.9022 S13: -2.0507 REMARK 3 S21: -1.2010 S22: 0.7932 S23: -0.4846 REMARK 3 S31: 1.3677 S32: 2.2156 S33: -0.4213 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 141 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8242 -72.1862 -8.8378 REMARK 3 T TENSOR REMARK 3 T11: 1.5240 T22: 1.2909 REMARK 3 T33: 2.2327 T12: -0.5633 REMARK 3 T13: 0.2466 T23: -0.8100 REMARK 3 L TENSOR REMARK 3 L11: 8.8602 L22: 4.9205 REMARK 3 L33: 5.5471 L12: -0.4677 REMARK 3 L13: 0.1841 L23: -5.1217 REMARK 3 S TENSOR REMARK 3 S11: 0.1068 S12: 0.1824 S13: -2.3534 REMARK 3 S21: -0.3700 S22: -0.2634 S23: 1.6385 REMARK 3 S31: 2.5656 S32: -2.3094 S33: 0.2406 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 154 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9260 -55.6311 -4.7236 REMARK 3 T TENSOR REMARK 3 T11: 1.3156 T22: 1.2309 REMARK 3 T33: 1.2086 T12: -0.2275 REMARK 3 T13: 0.8093 T23: -0.7639 REMARK 3 L TENSOR REMARK 3 L11: 2.3504 L22: 5.2575 REMARK 3 L33: 0.4907 L12: -1.4659 REMARK 3 L13: 1.0022 L23: -0.1932 REMARK 3 S TENSOR REMARK 3 S11: 0.4035 S12: -0.4481 S13: -0.1643 REMARK 3 S21: 0.1333 S22: -0.1905 S23: 0.4937 REMARK 3 S31: -0.5073 S32: -0.2512 S33: 0.4946 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 209 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.1742 -53.2328 -7.6108 REMARK 3 T TENSOR REMARK 3 T11: 1.4283 T22: 1.4122 REMARK 3 T33: 1.0082 T12: -0.0678 REMARK 3 T13: 0.5896 T23: -0.2465 REMARK 3 L TENSOR REMARK 3 L11: 5.5810 L22: 8.7779 REMARK 3 L33: 3.0977 L12: -0.3203 REMARK 3 L13: 0.6627 L23: 5.0981 REMARK 3 S TENSOR REMARK 3 S11: 0.3565 S12: 0.0212 S13: -0.4456 REMARK 3 S21: -0.0354 S22: -0.1632 S23: 0.2882 REMARK 3 S31: -0.4336 S32: -1.3931 S33: -0.1168 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9NCR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1000292957. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42728 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.240 REMARK 200 RESOLUTION RANGE LOW (A) : 34.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : 0.05206 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.10 REMARK 200 R MERGE FOR SHELL (I) : 1.41500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M LITHIUM SULFATE, 30MM MAGNESIUM REMARK 280 ACETATE, 50MM MES, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.77568 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.42750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.51041 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.77568 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 62.42750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 69.51041 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C -11 REMARK 465 ARG C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLU C 3 REMARK 465 THR C 4 REMARK 465 ALA C 5 REMARK 465 VAL C 6 REMARK 465 ILE C 7 REMARK 465 ASN C 8 REMARK 465 HIS C 9 REMARK 465 LYS C 10 REMARK 465 LYS C 11 REMARK 465 ARG C 12 REMARK 465 LYS C 13 REMARK 465 ASN C 14 REMARK 465 ASP C 50 REMARK 465 GLY C 51 REMARK 465 THR C 52 REMARK 465 LEU C 53 REMARK 465 GLN C 54 REMARK 465 GLU C 55 REMARK 465 PRO C 99 REMARK 465 GLU C 100 REMARK 465 GLU C 101 REMARK 465 ASP C 102 REMARK 465 ALA C 103 REMARK 465 GLY C 104 REMARK 465 ASP C 105 REMARK 465 GLU C 106 REMARK 465 LYS C 107 REMARK 465 GLY C 108 REMARK 465 MET C 248 REMARK 465 THR C 249 REMARK 465 THR C 250 REMARK 465 GLY C 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C 87 CD CE NZ REMARK 470 ARG C 98 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 109 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 117 CE NZ REMARK 470 LEU C 142 CG CD1 CD2 REMARK 470 GLN C 143 CG CD OE1 NE2 REMARK 470 ASN C 144 CG OD1 ND2 REMARK 470 ARG C 145 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 150 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 230 CG CD CE NZ REMARK 470 ARG C 243 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR C 97 -165.20 -119.16 REMARK 500 ARG C 145 75.61 -114.33 REMARK 500 PHE C 208 -66.52 -106.77 REMARK 500 THR C 246 0.55 -65.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 77 OE2 REMARK 620 2 ASP C 81 OD1 82.0 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9NB0 RELATED DB: PDB REMARK 900 RELATED ID: 7RVA RELATED DB: PDB DBREF 9NCR A -5 25 PDB 9NCR 9NCR -5 25 DBREF 9NCR B 18 48 PDB 9NCR 9NCR 18 48 DBREF 9NCR C 1 251 UNP P03856 REPE1_ECOLI 1 251 SEQADV 9NCR MET C -11 UNP P03856 INITIATING METHIONINE SEQADV 9NCR ARG C -10 UNP P03856 EXPRESSION TAG SEQADV 9NCR GLY C -9 UNP P03856 EXPRESSION TAG SEQADV 9NCR SER C -8 UNP P03856 EXPRESSION TAG SEQADV 9NCR HIS C -7 UNP P03856 EXPRESSION TAG SEQADV 9NCR HIS C -6 UNP P03856 EXPRESSION TAG SEQADV 9NCR HIS C -5 UNP P03856 EXPRESSION TAG SEQADV 9NCR HIS C -4 UNP P03856 EXPRESSION TAG SEQADV 9NCR HIS C -3 UNP P03856 EXPRESSION TAG SEQADV 9NCR HIS C -2 UNP P03856 EXPRESSION TAG SEQADV 9NCR GLY C -1 UNP P03856 EXPRESSION TAG SEQADV 9NCR SER C 0 UNP P03856 EXPRESSION TAG SEQADV 9NCR PRO C 118 UNP P03856 ARG 118 CONFLICT SEQRES 1 A 31 DG DC DC DG DG DA DC DC DT DG DT DG DA SEQRES 2 A 31 DC DA DA DA DT DT DG DC DC DC DT DC DA SEQRES 3 A 31 DG DC DC DC DG SEQRES 1 B 31 DC DC DG DG DG DC DT DG DA DG DG DG DC SEQRES 2 B 31 DA DA DT DT DT DG DT DC DA DC DA DG DG SEQRES 3 B 31 DT DC DC DG DG SEQRES 1 C 263 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 C 263 ALA GLU THR ALA VAL ILE ASN HIS LYS LYS ARG LYS ASN SEQRES 3 C 263 SER PRO ARG ILE VAL GLN SER ASN ASP LEU THR GLU ALA SEQRES 4 C 263 ALA TYR SER LEU SER ARG ASP GLN LYS ARG MET LEU TYR SEQRES 5 C 263 LEU PHE VAL ASP GLN ILE ARG LYS SER ASP GLY THR LEU SEQRES 6 C 263 GLN GLU HIS ASP GLY ILE CYS GLU ILE HIS VAL ALA LYS SEQRES 7 C 263 TYR ALA GLU ILE PHE GLY LEU THR SER ALA GLU ALA SER SEQRES 8 C 263 LYS ASP ILE ARG GLN ALA LEU LYS SER PHE ALA GLY LYS SEQRES 9 C 263 GLU VAL VAL PHE TYR ARG PRO GLU GLU ASP ALA GLY ASP SEQRES 10 C 263 GLU LYS GLY TYR GLU SER PHE PRO TRP PHE ILE LYS PRO SEQRES 11 C 263 ALA HIS SER PRO SER ARG GLY LEU TYR SER VAL HIS ILE SEQRES 12 C 263 ASN PRO TYR LEU ILE PRO PHE PHE ILE GLY LEU GLN ASN SEQRES 13 C 263 ARG PHE THR GLN PHE ARG LEU SER GLU THR LYS GLU ILE SEQRES 14 C 263 THR ASN PRO TYR ALA MET ARG LEU TYR GLU SER LEU CYS SEQRES 15 C 263 GLN TYR ARG LYS PRO ASP GLY SER GLY ILE VAL SER LEU SEQRES 16 C 263 LYS ILE ASP TRP ILE ILE GLU ARG TYR GLN LEU PRO GLN SEQRES 17 C 263 SER TYR GLN ARG MET PRO ASP PHE ARG ARG ARG PHE LEU SEQRES 18 C 263 GLN VAL CYS VAL ASN GLU ILE ASN SER ARG THR PRO MET SEQRES 19 C 263 ARG LEU SER TYR ILE GLU LYS LYS LYS GLY ARG GLN THR SEQRES 20 C 263 THR HIS ILE VAL PHE SER PHE ARG ASP ILE THR SER MET SEQRES 21 C 263 THR THR GLY HET MG C 301 1 HET MG C 302 1 HETNAM MG MAGNESIUM ION FORMUL 4 MG 2(MG 2+) HELIX 1 AA1 ASN C 22 GLU C 26 1 5 HELIX 2 AA2 SER C 32 LYS C 48 1 17 HELIX 3 AA3 VAL C 64 GLY C 72 1 9 HELIX 4 AA4 THR C 74 PHE C 89 1 16 HELIX 5 AA5 ASN C 132 TYR C 134 5 3 HELIX 6 AA6 LEU C 135 GLY C 141 1 7 HELIX 7 AA7 SER C 152 THR C 154 5 3 HELIX 8 AA8 ASN C 159 TYR C 172 1 14 HELIX 9 AA9 ILE C 185 GLN C 193 1 9 HELIX 10 AB1 PRO C 195 GLN C 199 5 5 HELIX 11 AB2 ARG C 200 PHE C 208 1 9 HELIX 12 AB3 PHE C 208 THR C 220 1 13 SHEET 1 AA1 2 ARG C 17 SER C 21 0 SHEET 2 AA1 2 PHE C 146 ARG C 150 -1 O THR C 147 N GLN C 20 SHEET 1 AA2 3 ILE C 59 HIS C 63 0 SHEET 2 AA2 3 LEU C 126 HIS C 130 -1 O VAL C 129 N CYS C 60 SHEET 3 AA2 3 HIS C 120 SER C 123 -1 N HIS C 120 O SER C 128 SHEET 1 AA3 2 GLU C 93 PHE C 96 0 SHEET 2 AA3 2 GLU C 110 PRO C 113 -1 O PHE C 112 N VAL C 94 SHEET 1 AA4 3 GLY C 179 LYS C 184 0 SHEET 2 AA4 3 GLN C 234 ASP C 244 -1 O ILE C 238 N LEU C 183 SHEET 3 AA4 3 MET C 222 LYS C 231 -1 N LYS C 231 O GLN C 234 LINK OE2 GLU C 77 MG MG C 301 1555 1555 2.34 LINK OD1 ASP C 81 MG MG C 301 1555 1555 2.59 CRYST1 76.032 124.855 139.093 90.00 91.85 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013152 0.000000 0.000424 0.00000 SCALE2 0.000000 0.008009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007193 0.00000 CONECT 1736 3062 CONECT 1763 3062 CONECT 3062 1736 1763 MASTER 477 0 2 12 10 0 0 6 3026 3 3 27 END