data_9NDC # _entry.id 9NDC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9NDC pdb_00009ndc 10.2210/pdb9ndc/pdb WWPDB D_1000293036 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-06-11 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9NDC _pdbx_database_status.recvd_initial_deposition_date 2025-02-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email rs17@nyu.edu _pdbx_contact_author.name_first Ruojie _pdbx_contact_author.name_last Sha _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0807-734X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Horvath, A.' 1 0009-0008-5770-8014 'Vecchioni, S.' 2 0000-0001-8243-650X 'Woloszyn, K.' 3 0000-0003-1200-583X 'Ohayon, Y.P.' 4 0000-0001-7500-4282 'Sha, R.' 5 0000-0002-0807-734X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Shifted tensegrity triangles' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horvath, A.' 1 0009-0008-5770-8014 primary 'Vecchioni, S.' 2 0000-0001-8243-650X primary 'Woloszyn, K.' 3 0000-0003-1200-583X primary 'Ohayon, Y.P.' 4 0000-0001-7500-4282 primary 'Sha, R.' 5 0000-0002-0807-734X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA (31-MER)' 9532.138 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*GP*C)-3') ; 902.636 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*CP*TP*CP*GP*TP*CP*AP*GP*TP*CP*GP*T)-3') ; 4262.764 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*CP*CP*AP*CP*GP*TP*GP*TP*GP*AP*GP*TP*CP*A)-3') ; 4280.792 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DC)(DA)(DG)(DC)(DC)(DT)(DG)(DA)(DC)(DT)(DC)(DA)(DC)(DA)(DC)(DG)(DT)(DG)(DG)(DA) (DC)(DG)(DA)(DC)(DT)(DG)(DA)(DC)(DG)(DA)(DG) ; CAGCCTGACTCACACGTGGACGACTGACGAG A ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DC)' GGC B ? 3 polydeoxyribonucleotide no no '(DT)(DG)(DC)(DT)(DC)(DG)(DT)(DC)(DA)(DG)(DT)(DC)(DG)(DT)' TGCTCGTCAGTCGT C ? 4 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DC)(DG)(DT)(DG)(DT)(DG)(DA)(DG)(DT)(DC)(DA)' CCACGTGTGAGTCA E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DG n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DG n 1 8 DA n 1 9 DC n 1 10 DT n 1 11 DC n 1 12 DA n 1 13 DC n 1 14 DA n 1 15 DC n 1 16 DG n 1 17 DT n 1 18 DG n 1 19 DG n 1 20 DA n 1 21 DC n 1 22 DG n 1 23 DA n 1 24 DC n 1 25 DT n 1 26 DG n 1 27 DA n 1 28 DC n 1 29 DG n 1 30 DA n 1 31 DG n 2 1 DG n 2 2 DG n 2 3 DC n 3 1 DT n 3 2 DG n 3 3 DC n 3 4 DT n 3 5 DC n 3 6 DG n 3 7 DT n 3 8 DC n 3 9 DA n 3 10 DG n 3 11 DT n 3 12 DC n 3 13 DG n 3 14 DT n 4 1 DC n 4 2 DC n 4 3 DA n 4 4 DC n 4 5 DG n 4 6 DT n 4 7 DG n 4 8 DT n 4 9 DG n 4 10 DA n 4 11 DG n 4 12 DT n 4 13 DC n 4 14 DA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 31 'synthetic construct' ? 32630 ? 2 1 sample 1 3 'synthetic construct' ? 32630 ? 3 1 sample 1 14 'synthetic construct' ? 32630 ? 4 1 sample 1 14 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 13 13 DC DC A . n A 1 2 DA 2 14 14 DA DA A . n A 1 3 DG 3 15 15 DG DG A . n A 1 4 DC 4 16 16 DC DC A . n A 1 5 DC 5 17 17 DC DC A . n A 1 6 DT 6 18 18 DT DT A . n A 1 7 DG 7 19 19 DG DG A . n A 1 8 DA 8 20 20 DA DA A . n A 1 9 DC 9 21 21 DC DC A . n A 1 10 DT 10 22 22 DT DT A . n A 1 11 DC 11 23 23 DC DC A . n A 1 12 DA 12 24 24 DA DA A . n A 1 13 DC 13 25 25 DC DC A . n A 1 14 DA 14 26 26 DA DA A . n A 1 15 DC 15 27 27 DC DC A . n A 1 16 DG 16 28 28 DG DG A . n A 1 17 DT 17 29 29 DT DT A . n A 1 18 DG 18 30 30 DG DG A . n A 1 19 DG 19 31 31 DG DG A . n A 1 20 DA 20 32 32 DA DA A . n A 1 21 DC 21 33 33 DC DC A . n A 1 22 DG 22 34 34 DG DG A . n A 1 23 DA 23 35 35 DA DA A . n A 1 24 DC 24 36 36 DC DC A . n A 1 25 DT 25 37 37 DT DT A . n A 1 26 DG 26 38 38 DG DG A . n A 1 27 DA 27 39 39 DA DA A . n A 1 28 DC 28 40 40 DC DC A . n A 1 29 DG 29 41 41 DG DG A . n A 1 30 DA 30 42 42 DA DA A . n A 1 31 DG 31 43 43 DG DG A . n B 2 1 DG 1 17 17 DG DG B . n B 2 2 DG 2 18 18 DG DG B . n B 2 3 DC 3 19 19 DC DC B . n C 3 1 DT 1 -11 -11 DT DT C . n C 3 2 DG 2 -10 -10 DG DG C . n C 3 3 DC 3 -9 -9 DC DC C . n C 3 4 DT 4 -8 -8 DT DT C . n C 3 5 DC 5 -7 -7 DC DC C . n C 3 6 DG 6 -6 -6 DG DG C . n C 3 7 DT 7 -5 -5 DT DT C . n C 3 8 DC 8 -4 -4 DC DC C . n C 3 9 DA 9 -3 -3 DA DA C . n C 3 10 DG 10 -2 -2 DG DG C . n C 3 11 DT 11 -1 -1 DT DT C . n C 3 12 DC 12 0 0 DC DC C . n C 3 13 DG 13 1 1 DG DG C . n C 3 14 DT 14 2 2 DT DT C . n D 4 1 DC 1 3 3 DC DC E . n D 4 2 DC 2 4 4 DC DC E . n D 4 3 DA 3 5 5 DA DA E . n D 4 4 DC 4 6 6 DC DC E . n D 4 5 DG 5 7 7 DG DG E . n D 4 6 DT 6 8 8 DT DT E . n D 4 7 DG 7 9 9 DG DG E . n D 4 8 DT 8 10 10 DT DT E . n D 4 9 DG 9 11 11 DG DG E . n D 4 10 DA 10 12 12 DA DA E . n D 4 11 DG 11 13 13 DG DG E . n D 4 12 DT 12 14 14 DT DT E . n D 4 13 DC 13 15 15 DC DC E . n D 4 14 DA 14 16 16 DA DA E . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 9NDC _cell.details ? _cell.formula_units_Z ? _cell.length_a 167.842 _cell.length_a_esd ? _cell.length_b 167.842 _cell.length_b_esd ? _cell.length_c 92.111 _cell.length_c_esd ? _cell.volume 2247208.768 _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9NDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'R 3' _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9NDC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details '338-293 at 0.4/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 1.25 M magnesium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-02-26 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 243.48 _reflns.entry_id 9NDC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 6.34 _reflns.d_resolution_low 83.921 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1323 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 83.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half .995 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 6.341 7.168 ? ? ? ? ? ? 189 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 .154 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 14.062 83.921 ? ? ? ? ? ? 189 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 .995 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 583.06 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9NDC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 6.34 _refine.ls_d_res_low 36.93 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1257 _refine.ls_number_reflns_R_free 69 _refine.ls_number_reflns_R_work 1188 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 61.53 _refine.ls_percent_reflns_R_free 5.49 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2393 _refine.ls_R_factor_R_free 0.2602 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2377 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.96 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 44.3960 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.5551 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 6.34 _refine_hist.d_res_low 36.93 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1265 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1265 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0044 ? 1416 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.7191 ? 2177 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0378 ? 246 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0035 ? 62 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 38.2724 ? 606 ? f_dihedral_angle_d ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 6.34 _refine_ls_shell.d_res_low 36.93 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_R_work 1188 _refine_ls_shell.percent_reflns_obs 61.53 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2377 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2602 # _struct.entry_id 9NDC _struct.title '[3,14,12-2] Shifted tensegrity triangle with an (arm,center,arm) distribution of (3,14,12) base pairs and 2 nt sticky ends' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9NDC _struct_keywords.text 'tensegrity triangle, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9NDC 9NDC ? 1 ? 1 2 PDB 9NDC 9NDC ? 2 ? 1 3 PDB 9NDC 9NDC ? 3 ? 1 4 PDB 9NDC 9NDC ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9NDC A 1 ? 31 ? 9NDC 13 ? 43 ? 13 43 2 2 9NDC B 1 ? 3 ? 9NDC 17 ? 19 ? 17 19 3 3 9NDC C 1 ? 14 ? 9NDC -11 ? 2 ? -11 2 4 4 9NDC E 1 ? 14 ? 9NDC 3 ? 16 ? 3 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 1 2 A,B,C,D 1 3 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 15 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 15 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 15 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 16 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 16 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 16 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 17 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 17 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 17 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 6 N3 ? ? ? 1_555 D DA 14 N1 ? ? A DT 18 E DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 O4 ? ? ? 1_555 D DA 14 N6 ? ? A DT 18 E DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 7 N1 ? ? ? 1_555 D DC 13 N3 ? ? A DG 19 E DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 7 N2 ? ? ? 1_555 D DC 13 O2 ? ? A DG 19 E DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 7 O6 ? ? ? 1_555 D DC 13 N4 ? ? A DG 19 E DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 8 N1 ? ? ? 1_555 D DT 12 N3 ? ? A DA 20 E DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N6 ? ? ? 1_555 D DT 12 O4 ? ? A DA 20 E DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 9 N3 ? ? ? 1_555 D DG 11 N1 ? ? A DC 21 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 N4 ? ? ? 1_555 D DG 11 O6 ? ? A DC 21 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 O2 ? ? ? 1_555 D DG 11 N2 ? ? A DC 21 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 D DA 10 N1 ? ? A DT 22 E DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 D DA 10 N6 ? ? A DT 22 E DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 N3 ? ? ? 1_555 D DG 9 N1 ? ? A DC 23 E DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N4 ? ? ? 1_555 D DG 9 O6 ? ? A DC 23 E DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 O2 ? ? ? 1_555 D DG 9 N2 ? ? A DC 23 E DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N1 ? ? ? 1_555 D DT 8 N3 ? ? A DA 24 E DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N6 ? ? ? 1_555 D DT 8 O4 ? ? A DA 24 E DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 13 N3 ? ? ? 1_555 D DG 7 N1 ? ? A DC 25 E DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 13 N4 ? ? ? 1_555 D DG 7 O6 ? ? A DC 25 E DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 O2 ? ? ? 1_555 D DG 7 N2 ? ? A DC 25 E DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 14 N1 ? ? ? 1_555 D DT 6 N3 ? ? A DA 26 E DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 14 N6 ? ? ? 1_555 D DT 6 O4 ? ? A DA 26 E DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 15 N3 ? ? ? 1_555 D DG 5 N1 ? ? A DC 27 E DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 15 N4 ? ? ? 1_555 D DG 5 O6 ? ? A DC 27 E DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 O2 ? ? ? 1_555 D DG 5 N2 ? ? A DC 27 E DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 16 N1 ? ? ? 1_555 D DC 4 N3 ? ? A DG 28 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 16 N2 ? ? ? 1_555 D DC 4 O2 ? ? A DG 28 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 16 O6 ? ? ? 1_555 D DC 4 N4 ? ? A DG 28 E DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 17 N3 ? ? ? 1_555 D DA 3 N1 ? ? A DT 29 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 17 O4 ? ? ? 1_555 D DA 3 N6 ? ? A DT 29 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 18 N1 ? ? ? 1_555 D DC 2 N3 ? ? A DG 30 E DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 18 N2 ? ? ? 1_555 D DC 2 O2 ? ? A DG 30 E DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 18 O6 ? ? ? 1_555 D DC 2 N4 ? ? A DG 30 E DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 19 N1 ? ? ? 1_555 D DC 1 N3 ? ? A DG 31 E DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 19 N2 ? ? ? 1_555 D DC 1 O2 ? ? A DG 31 E DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 19 O6 ? ? ? 1_555 D DC 1 N4 ? ? A DG 31 E DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DA 20 N1 ? ? ? 1_555 C DT 14 N3 ? ? A DA 32 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DA 20 N6 ? ? ? 1_555 C DT 14 O4 ? ? A DA 32 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DC 21 N3 ? ? ? 1_555 C DG 13 N1 ? ? A DC 33 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DC 21 N4 ? ? ? 1_555 C DG 13 O6 ? ? A DC 33 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DC 21 O2 ? ? ? 1_555 C DG 13 N2 ? ? A DC 33 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DG 22 N1 ? ? ? 1_555 C DC 12 N3 ? ? A DG 34 C DC 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DG 22 N2 ? ? ? 1_555 C DC 12 O2 ? ? A DG 34 C DC 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DG 22 O6 ? ? ? 1_555 C DC 12 N4 ? ? A DG 34 C DC 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DA 23 N1 ? ? ? 1_555 C DT 11 N3 ? ? A DA 35 C DT -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DA 23 N6 ? ? ? 1_555 C DT 11 O4 ? ? A DA 35 C DT -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DT 25 N3 ? ? ? 1_555 C DA 9 N1 ? ? A DT 37 C DA -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DT 25 O4 ? ? ? 1_555 C DA 9 N6 ? ? A DT 37 C DA -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DG 26 N1 ? ? ? 1_555 C DC 8 N3 ? ? A DG 38 C DC -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DG 26 N2 ? ? ? 1_555 C DC 8 O2 ? ? A DG 38 C DC -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DG 26 O6 ? ? ? 1_555 C DC 8 N4 ? ? A DG 38 C DC -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A DA 27 N1 ? ? ? 1_555 C DT 7 N3 ? ? A DA 39 C DT -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A DA 27 N6 ? ? ? 1_555 C DT 7 O4 ? ? A DA 39 C DT -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A DC 28 N3 ? ? ? 1_555 C DG 6 N1 ? ? A DC 40 C DG -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A DC 28 N4 ? ? ? 1_555 C DG 6 O6 ? ? A DC 40 C DG -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A DC 28 O2 ? ? ? 1_555 C DG 6 N2 ? ? A DC 40 C DG -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A DG 29 N1 ? ? ? 1_555 C DC 5 N3 ? ? A DG 41 C DC -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A DG 29 N2 ? ? ? 1_555 C DC 5 O2 ? ? A DG 41 C DC -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A DG 29 O6 ? ? ? 1_555 C DC 5 N4 ? ? A DG 41 C DC -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A DA 30 N1 ? ? ? 1_555 C DT 4 N3 ? ? A DA 42 C DT -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A DA 30 N6 ? ? ? 1_555 C DT 4 O4 ? ? A DA 42 C DT -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A DG 31 N1 ? ? ? 1_555 C DC 3 N3 ? ? A DG 43 C DC -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A DG 31 N2 ? ? ? 1_555 C DC 3 O2 ? ? A DG 43 C DC -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A DG 31 O6 ? ? ? 1_555 C DC 3 N4 ? ? A DG 43 C DC -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9NDC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 110.44 108.30 2.14 0.30 N 2 1 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.55 108.30 2.25 0.30 N 3 1 "O4'" A DG 31 ? ? "C1'" A DG 31 ? ? N9 A DG 31 ? ? 111.07 108.30 2.77 0.30 N 4 1 "O4'" C DG 1 ? ? "C1'" C DG 1 ? ? N9 C DG 1 ? ? 110.48 108.30 2.18 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x+1/3,y+2/3,z+2/3 5 -y+1/3,x-y+2/3,z+2/3 6 -x+y+1/3,-x+2/3,z+2/3 7 x+2/3,y+1/3,z+1/3 8 -y+2/3,x-y+1/3,z+1/3 9 -x+y+2/3,-x+1/3,z+1/3 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 30.6022982593 4.72390144547 -29.5920375333 4.02659140833 ? -0.456627751728 ? -1.24442772697 ? 3.11417581592 ? 2.29709694044 ? 5.99296516396 ? 6.93468265767 ? -1.55700194646 ? -4.72442591181 ? 8.33430804775 ? 3.21036630738 ? 4.60119227923 ? 0.302836941995 ? 0.192294395255 ? 2.54049269865 ? -0.0670462211353 ? 2.71596306078 ? 1.01063009184 ? -1.96956686246 ? -2.43379877941 ? -0.58003014448 ? 2 'X-RAY DIFFRACTION' ? refined -11.0292779612 30.4875166033 -14.2929829094 5.47000930691 ? 3.64327127434 ? 1.56536411885 ? 4.6253473212 ? -1.5582052451 ? 4.47144947382 ? 1.02651421735 ? -1.07246643074 ? 0.994328954855 ? 1.02234891463 ? -0.946231234635 ? 0.934156671005 ? -0.205780774025 ? -1.01772171318 ? -0.0130765213432 ? 0.331295365906 ? -1.58239769391 ? 1.50630827965 ? 1.14666023396 ? -0.313056806253 ? -3.19267876842 ? 3 'X-RAY DIFFRACTION' ? refined 34.3927136023 -0.409014097595 -27.8091593286 2.58436762098 ? 1.90967694813 ? -1.03963882993 ? 6.96839478457 ? -0.534256729634 ? 7.91674925702 ? 5.40363355543 ? -4.51811511478 ? 4.05129234402 ? 3.77825268028 ? -3.35144961527 ? 3.30484461811 ? -0.655019872291 ? -1.16695010127 ? -0.444429389847 ? 0.45681498586 ? 0.938432954051 ? 0.487966916086 ? -0.185928049854 ? -0.202468396547 ? -0.229433820221 ? 4 'X-RAY DIFFRACTION' ? refined -26.0076140808 39.4794997695 -10.3962234089 4.81883684483 ? 3.81318190106 ? 1.11848299115 ? 5.0960783804 ? -0.126029607396 ? 7.57512231534 ? 0.539721476303 ? 0.789718828781 ? 0.128236341292 ? 1.84397037968 ? -0.962346674527 ? 1.99585451295 ? 0.157678464339 ? -0.377146429604 ? -0.196948050181 ? -0.42125895972 ? 0.383945503131 ? 0.679516098771 ? -0.348090916068 ? -0.464529675667 ? 1.0359228455 ? 5 'X-RAY DIFFRACTION' ? refined 11.9888871181 16.2201208862 -21.7633846697 6.55864008477 ? 2.81246910322 ? 1.15262424045 ? 3.43770094152 ? -1.90918015912 ? 7.25498241894 ? 1.33128029659 ? -0.652356905725 ? -0.532622292483 ? 2.90096491959 ? -1.74212372978 ? 2.61948535388 ? -0.0552021558137 ? -0.219051604613 ? 0.564587722354 ? 1.13766905841 ? -1.04634016519 ? -0.265878938925 ? -0.578352922395 ? -0.574499169897 ? -4.44625121384 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 13 ? A ? A 22 ? ? ;chain 'A' and (resid 13 through 22 ) ; 2 'X-RAY DIFFRACTION' 2 A ? A 23 ? A ? A 43 ? ? ;chain 'A' and (resid 23 through 43 ) ; 3 'X-RAY DIFFRACTION' 3 B ? B 17 ? B ? B 19 ? ? ;chain 'B' and (resid 17 through 19 ) ; 4 'X-RAY DIFFRACTION' 4 C ? C -11 ? C ? C 2 ? ? ;chain 'C' and (resid -11 through 2 ) ; 5 'X-RAY DIFFRACTION' 5 D ? E 3 ? D ? E 16 ? ? ;chain 'E' and (resid 3 through 16 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9NDC 'double helix' 9NDC 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 B DC 3 1_555 -0.201 -0.177 0.138 0.125 -6.155 -0.180 1 A_DG15:DC19_B A 15 ? B 19 ? 19 1 1 A DC 4 1_555 B DG 2 1_555 0.183 -0.221 -0.051 -2.084 -5.305 1.398 2 A_DC16:DG18_B A 16 ? B 18 ? 19 1 1 A DC 5 1_555 B DG 1 1_555 0.190 -0.124 -0.014 0.416 -3.614 1.711 3 A_DC17:DG17_B A 17 ? B 17 ? 19 1 1 A DT 6 1_555 D DA 14 1_555 0.003 -0.134 0.211 1.687 -1.960 -0.360 4 A_DT18:DA16_E A 18 ? E 16 ? 20 1 1 A DG 7 1_555 D DC 13 1_555 -0.238 -0.131 0.015 -3.090 -5.749 1.134 5 A_DG19:DC15_E A 19 ? E 15 ? 19 1 1 A DA 8 1_555 D DT 12 1_555 0.047 -0.116 0.088 -1.362 -4.704 1.692 6 A_DA20:DT14_E A 20 ? E 14 ? 20 1 1 A DC 9 1_555 D DG 11 1_555 0.207 -0.126 0.131 -0.557 -6.373 -0.740 7 A_DC21:DG13_E A 21 ? E 13 ? 19 1 1 A DT 10 1_555 D DA 10 1_555 -0.143 -0.007 -0.026 -3.883 -5.491 -7.554 8 A_DT22:DA12_E A 22 ? E 12 ? 20 1 1 A DC 11 1_555 D DG 9 1_555 0.165 -0.173 0.038 -4.091 -3.835 -0.488 9 A_DC23:DG11_E A 23 ? E 11 ? 19 1 1 A DA 12 1_555 D DT 8 1_555 0.076 -0.102 0.094 -0.973 -3.327 -1.536 10 A_DA24:DT10_E A 24 ? E 10 ? 20 1 1 A DC 13 1_555 D DG 7 1_555 0.195 -0.101 0.102 -1.420 -1.850 -1.596 11 A_DC25:DG9_E A 25 ? E 9 ? 19 1 1 A DA 14 1_555 D DT 6 1_555 0.110 -0.133 0.059 -1.889 -4.781 -2.604 12 A_DA26:DT8_E A 26 ? E 8 ? 20 1 1 A DC 15 1_555 D DG 5 1_555 0.147 -0.142 -0.024 0.971 -6.129 0.186 13 A_DC27:DG7_E A 27 ? E 7 ? 19 1 1 A DG 16 1_555 D DC 4 1_555 -0.186 -0.099 0.076 -1.134 -1.444 -0.885 14 A_DG28:DC6_E A 28 ? E 6 ? 19 1 1 A DT 17 1_555 D DA 3 1_555 -0.080 -0.172 0.089 1.618 -0.586 0.729 15 A_DT29:DA5_E A 29 ? E 5 ? 20 1 1 A DG 18 1_555 D DC 2 1_555 -0.204 -0.137 -0.189 -1.900 2.458 0.789 16 A_DG30:DC4_E A 30 ? E 4 ? 19 1 1 A DG 19 1_555 D DC 1 1_555 -0.176 -0.109 -0.034 -3.300 4.015 0.331 17 A_DG31:DC3_E A 31 ? E 3 ? 19 1 1 A DA 20 1_555 C DT 14 1_555 0.025 -0.164 0.129 -0.535 -4.845 2.451 18 A_DA32:DT2_C A 32 ? C 2 ? 20 1 1 A DC 21 1_555 C DG 13 1_555 0.198 -0.139 0.184 -1.126 0.230 1.583 19 A_DC33:DG1_C A 33 ? C 1 ? 19 1 1 A DG 22 1_555 C DC 12 1_555 -0.234 -0.140 0.032 1.606 3.129 0.019 20 A_DG34:DC0_C A 34 ? C 0 ? 19 1 1 A DA 23 1_555 C DT 11 1_555 0.080 -0.059 0.036 3.855 -1.524 -5.187 21 A_DA35:DT-1_C A 35 ? C -1 ? 20 1 1 A DT 25 1_555 C DA 9 1_555 -0.071 -0.118 0.069 -1.352 -4.732 3.472 22 A_DT37:DA-3_C A 37 ? C -3 ? 20 1 1 A DG 26 1_555 C DC 8 1_555 -0.174 -0.138 0.014 -1.868 -5.748 -2.215 23 A_DG38:DC-4_C A 38 ? C -4 ? 19 1 1 A DA 27 1_555 C DT 7 1_555 0.070 -0.127 -0.207 -3.917 -4.456 -0.335 24 A_DA39:DT-5_C A 39 ? C -5 ? 20 1 1 A DC 28 1_555 C DG 6 1_555 0.161 -0.088 0.041 -1.014 -1.481 -0.599 25 A_DC40:DG-6_C A 40 ? C -6 ? 19 1 1 A DG 29 1_555 C DC 5 1_555 -0.186 -0.118 -0.038 -1.273 -4.499 -0.122 26 A_DG41:DC-7_C A 41 ? C -7 ? 19 1 1 A DA 30 1_555 C DT 4 1_555 0.095 -0.090 0.012 -2.827 -1.323 -3.571 27 A_DA42:DT-8_C A 42 ? C -8 ? 20 1 1 A DG 31 1_555 C DC 3 1_555 -0.197 -0.125 -0.070 -1.610 -3.876 -1.432 28 A_DG43:DC-9_C A 43 ? C -9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 B DC 3 1_555 A DC 4 1_555 B DG 2 1_555 -0.900 -0.274 3.093 0.924 -2.666 41.266 -0.118 1.367 3.084 -3.778 -1.310 41.358 1 AA_DG15DC16:DG18DC19_BB A 15 ? B 19 ? A 16 ? B 18 ? 1 A DC 4 1_555 B DG 2 1_555 A DC 5 1_555 B DG 1 1_555 -0.139 0.854 3.291 -0.046 1.191 30.592 1.379 0.254 3.321 2.257 0.087 30.615 2 AA_DC16DC17:DG17DG18_BB A 16 ? B 18 ? A 17 ? B 17 ? 1 A DC 5 1_555 B DG 1 1_555 A DT 6 1_555 D DA 14 1_555 0.356 -0.049 3.584 -4.983 -4.983 34.113 0.744 -1.421 3.471 -8.384 8.384 34.812 3 AA_DC17DT18:DA16DG17_EB A 17 ? B 17 ? A 18 ? E 16 ? 1 A DT 6 1_555 D DA 14 1_555 A DG 7 1_555 D DC 13 1_555 -0.366 -0.446 2.959 -2.191 6.267 45.913 -1.044 0.298 2.891 7.984 2.791 46.365 4 AA_DT18DG19:DC15DA16_EE A 18 ? E 16 ? A 19 ? E 15 ? 1 A DG 7 1_555 D DC 13 1_555 A DA 8 1_555 D DT 12 1_555 -0.622 0.028 3.001 -2.616 2.055 32.054 -0.289 0.690 3.037 3.710 4.722 32.222 5 AA_DG19DA20:DT14DC15_EE A 19 ? E 15 ? A 20 ? E 14 ? 1 A DA 8 1_555 D DT 12 1_555 A DC 9 1_555 D DG 11 1_555 -0.566 -0.659 3.107 -1.356 0.343 29.402 -1.367 0.838 3.122 0.676 2.671 29.434 6 AA_DA20DC21:DG13DT14_EE A 20 ? E 14 ? A 21 ? E 13 ? 1 A DC 9 1_555 D DG 11 1_555 A DT 10 1_555 D DA 10 1_555 -0.562 -0.810 3.227 2.664 -2.070 33.704 -1.062 1.388 3.217 -3.560 -4.581 33.868 7 AA_DC21DT22:DA12DG13_EE A 21 ? E 13 ? A 22 ? E 12 ? 1 A DT 10 1_555 D DA 10 1_555 A DC 11 1_555 D DG 9 1_555 -0.097 -0.268 3.522 -5.637 -2.336 36.379 -0.081 -0.673 3.507 -3.709 8.951 36.870 8 AA_DT22DC23:DG11DA12_EE A 22 ? E 12 ? A 23 ? E 11 ? 1 A DC 11 1_555 D DG 9 1_555 A DA 12 1_555 D DT 8 1_555 -0.020 1.138 3.718 -4.297 2.311 38.317 1.394 -0.577 3.759 3.504 6.514 38.615 9 AA_DC23DA24:DT10DG11_EE A 23 ? E 11 ? A 24 ? E 10 ? 1 A DA 12 1_555 D DT 8 1_555 A DC 13 1_555 D DG 7 1_555 0.144 -0.531 3.522 -3.913 -0.107 36.331 -0.830 -0.811 3.490 -0.172 6.253 36.534 10 AA_DA24DC25:DG9DT10_EE A 24 ? E 10 ? A 25 ? E 9 ? 1 A DC 13 1_555 D DG 7 1_555 A DA 14 1_555 D DT 6 1_555 -1.385 0.458 3.259 -3.430 0.584 29.822 0.762 1.953 3.401 1.130 6.637 30.019 11 AA_DC25DA26:DT8DG9_EE A 25 ? E 9 ? A 26 ? E 8 ? 1 A DA 14 1_555 D DT 6 1_555 A DC 15 1_555 D DG 5 1_555 0.451 0.134 3.355 -4.295 0.438 37.490 0.149 -1.263 3.287 0.678 6.656 37.729 12 AA_DA26DC27:DG7DT8_EE A 26 ? E 8 ? A 27 ? E 7 ? 1 A DC 15 1_555 D DG 5 1_555 A DG 16 1_555 D DC 4 1_555 -0.166 -0.643 3.018 -2.037 4.860 27.549 -2.369 -0.093 2.869 10.088 4.228 28.039 13 AA_DC27DG28:DC6DG7_EE A 27 ? E 7 ? A 28 ? E 6 ? 1 A DG 16 1_555 D DC 4 1_555 A DT 17 1_555 D DA 3 1_555 -0.465 -0.825 3.283 1.885 1.701 30.706 -1.881 1.240 3.200 3.206 -3.553 30.809 14 AA_DG28DT29:DA5DC6_EE A 28 ? E 6 ? A 29 ? E 5 ? 1 A DT 17 1_555 D DA 3 1_555 A DG 18 1_555 D DC 2 1_555 0.088 -0.233 3.836 -0.995 5.133 42.389 -0.922 -0.237 3.781 7.067 1.369 42.695 15 AA_DT29DG30:DC4DA5_EE A 29 ? E 5 ? A 30 ? E 4 ? 1 A DG 18 1_555 D DC 2 1_555 A DG 19 1_555 D DC 1 1_555 0.978 -1.080 3.407 -1.133 2.412 32.636 -2.342 -1.935 3.286 4.283 2.011 32.741 16 AA_DG30DG31:DC3DC4_EE A 30 ? E 4 ? A 31 ? E 3 ? 1 A DG 19 1_555 D DC 1 1_555 A DA 20 1_555 C DT 14 1_555 -0.120 -0.041 3.244 -6.015 8.309 29.658 -1.635 -0.906 3.085 15.655 11.333 31.344 17 AA_DG31DA32:DT2DC3_CE A 31 ? E 3 ? A 32 ? C 2 ? 1 A DA 20 1_555 C DT 14 1_555 A DC 21 1_555 C DG 13 1_555 -0.829 0.564 3.372 -1.717 -5.422 31.022 2.071 1.199 3.269 -10.032 3.176 31.527 18 AA_DA32DC33:DG1DT2_CC A 32 ? C 2 ? A 33 ? C 1 ? 1 A DC 21 1_555 C DG 13 1_555 A DG 22 1_555 C DC 12 1_555 -0.776 0.837 3.166 -1.582 3.580 33.140 0.871 1.093 3.268 6.250 2.762 33.364 19 AA_DC33DG34:DC0DG1_CC A 33 ? C 1 ? A 34 ? C 0 ? 1 A DG 22 1_555 C DC 12 1_555 A DA 23 1_555 C DT 11 1_555 -0.994 -0.066 3.274 -1.516 4.296 36.278 -0.701 1.374 3.282 6.866 2.422 36.553 20 AA_DG34DA35:DT-1DC0_CC A 34 ? C 0 ? A 35 ? C -1 ? 1 A DA 23 1_555 C DT 11 1_555 A DT 25 1_555 C DA 9 1_555 0.902 -1.264 6.719 1.381 -2.174 66.033 -0.978 -0.713 6.769 -1.995 -1.266 66.078 21 AA_DA35DT37:DA-3DT-1_CC A 35 ? C -1 ? A 37 ? C -3 ? 1 A DT 25 1_555 C DA 9 1_555 A DG 26 1_555 C DC 8 1_555 -1.878 0.008 2.919 -6.811 1.294 35.449 -0.160 2.120 3.211 2.100 11.056 36.099 22 AA_DT37DG38:DC-4DA-3_CC A 37 ? C -3 ? A 38 ? C -4 ? 1 A DG 26 1_555 C DC 8 1_555 A DA 27 1_555 C DT 7 1_555 -0.128 0.867 3.234 -0.363 -0.562 39.009 1.365 0.149 3.222 -0.841 0.544 39.015 23 AA_DG38DA39:DT-5DC-4_CC A 38 ? C -4 ? A 39 ? C -5 ? 1 A DA 27 1_555 C DT 7 1_555 A DC 28 1_555 C DG 6 1_555 -0.338 -0.871 3.423 1.379 -0.137 30.733 -1.613 0.919 3.409 -0.258 -2.601 30.764 24 AA_DA39DC40:DG-6DT-5_CC A 39 ? C -5 ? A 40 ? C -6 ? 1 A DC 28 1_555 C DG 6 1_555 A DG 29 1_555 C DC 5 1_555 -1.452 1.298 3.273 -2.120 0.196 29.283 2.518 2.400 3.376 0.387 4.186 29.359 25 AA_DC40DG41:DC-7DG-6_CC A 40 ? C -6 ? A 41 ? C -7 ? 1 A DG 29 1_555 C DC 5 1_555 A DA 30 1_555 C DT 4 1_555 -2.084 0.576 3.166 -7.852 6.585 38.818 0.055 2.102 3.552 9.703 11.570 40.097 26 AA_DG41DA42:DT-8DC-7_CC A 41 ? C -7 ? A 42 ? C -8 ? 1 A DA 30 1_555 C DT 4 1_555 A DG 31 1_555 C DC 3 1_555 -0.618 0.368 3.594 -5.765 2.404 42.518 0.236 0.207 3.658 3.294 7.898 42.954 27 AA_DA42DG43:DC-9DT-8_CC A 42 ? C -8 ? A 43 ? C -9 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' CCF-2106790 3 'National Science Foundation (NSF, United States)' 'United States' GCR-2317843 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8d93 _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'R 3 :H' _space_group.name_Hall 'R 3' _space_group.IT_number 146 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 9NDC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.005958 _atom_sites.fract_transf_matrix[1][2] 0.003440 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006880 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010856 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #