data_9NE1 # _entry.id 9NE1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9NE1 pdb_00009ne1 10.2210/pdb9ne1/pdb WWPDB D_1000293005 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-02-25 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9NE1 _pdbx_database_status.recvd_initial_deposition_date 2025-02-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email alebus@pasteur.edu.uy _pdbx_contact_author.name_first Alejandro _pdbx_contact_author.name_last Buschiazzo _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2509-6526 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mondino, S.' 1 ? 'Dalla Rizza, J.' 2 ? 'Larrieux, N.' 3 ? 'Buschiazzo, A.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'A bacterial DOT1-like methyltransferase subverts paraspeckle dynamics and host cell splicing events' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nicchi, S.' 1 ? primary 'Mondino, S.' 2 ? primary 'Rusniok, C.' 3 ? primary 'Danckaert, A.' 4 ? primary 'Schoeler, H.' 5 ? primary 'Martyn, E.J.' 6 ? primary 'Dalla Rizza, J.' 7 ? primary 'Larrieux, N.' 8 ? primary 'Mahtal, N.' 9 ? primary 'Quentin, G.G.' 10 ? primary 'Matondo, M.' 11 ? primary 'Buschiazzo, A.' 12 ? primary 'Buchrieser, C.' 13 ? primary 'Rolando, M.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone-lysine N-methyltransferase, H3 lysine-79 specific' 25783.742 1 2.1.1.360 ? ? ? 2 non-polymer nat S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 3 water nat water 18.015 44 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Histone H3-K79 methyltransferase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MKHHHHHHSAGLEVLFQGPELRINRWQK(MLZ)LNLRHHAQIFHLLYDDVNGFMISQQARKNRDAIEYVYGEIEFLPFTA LLSMANIDHNTVFYDLGSGTGKAVVACAMVYPVHKSIGVELFPNLHQCACERLQKLAAMEGYTESSKKISFILGDFLTVD LSEATLIFINSSTLFGATWEALNTRLNSLPQLSTVITTSKTLSSSRFKLVTRAKIQMSWGVVFAFIHKKEN ; _entity_poly.pdbx_seq_one_letter_code_can ;MKHHHHHHSAGLEVLFQGPELRINRWQKKLNLRHHAQIFHLLYDDVNGFMISQQARKNRDAIEYVYGEIEFLPFTALLSM ANIDHNTVFYDLGSGTGKAVVACAMVYPVHKSIGVELFPNLHQCACERLQKLAAMEGYTESSKKISFILGDFLTVDLSEA TLIFINSSTLFGATWEALNTRLNSLPQLSTVITTSKTLSSSRFKLVTRAKIQMSWGVVFAFIHKKEN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 SER n 1 10 ALA n 1 11 GLY n 1 12 LEU n 1 13 GLU n 1 14 VAL n 1 15 LEU n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 PRO n 1 20 GLU n 1 21 LEU n 1 22 ARG n 1 23 ILE n 1 24 ASN n 1 25 ARG n 1 26 TRP n 1 27 GLN n 1 28 LYS n 1 29 MLZ n 1 30 LEU n 1 31 ASN n 1 32 LEU n 1 33 ARG n 1 34 HIS n 1 35 HIS n 1 36 ALA n 1 37 GLN n 1 38 ILE n 1 39 PHE n 1 40 HIS n 1 41 LEU n 1 42 LEU n 1 43 TYR n 1 44 ASP n 1 45 ASP n 1 46 VAL n 1 47 ASN n 1 48 GLY n 1 49 PHE n 1 50 MET n 1 51 ILE n 1 52 SER n 1 53 GLN n 1 54 GLN n 1 55 ALA n 1 56 ARG n 1 57 LYS n 1 58 ASN n 1 59 ARG n 1 60 ASP n 1 61 ALA n 1 62 ILE n 1 63 GLU n 1 64 TYR n 1 65 VAL n 1 66 TYR n 1 67 GLY n 1 68 GLU n 1 69 ILE n 1 70 GLU n 1 71 PHE n 1 72 LEU n 1 73 PRO n 1 74 PHE n 1 75 THR n 1 76 ALA n 1 77 LEU n 1 78 LEU n 1 79 SER n 1 80 MET n 1 81 ALA n 1 82 ASN n 1 83 ILE n 1 84 ASP n 1 85 HIS n 1 86 ASN n 1 87 THR n 1 88 VAL n 1 89 PHE n 1 90 TYR n 1 91 ASP n 1 92 LEU n 1 93 GLY n 1 94 SER n 1 95 GLY n 1 96 THR n 1 97 GLY n 1 98 LYS n 1 99 ALA n 1 100 VAL n 1 101 VAL n 1 102 ALA n 1 103 CYS n 1 104 ALA n 1 105 MET n 1 106 VAL n 1 107 TYR n 1 108 PRO n 1 109 VAL n 1 110 HIS n 1 111 LYS n 1 112 SER n 1 113 ILE n 1 114 GLY n 1 115 VAL n 1 116 GLU n 1 117 LEU n 1 118 PHE n 1 119 PRO n 1 120 ASN n 1 121 LEU n 1 122 HIS n 1 123 GLN n 1 124 CYS n 1 125 ALA n 1 126 CYS n 1 127 GLU n 1 128 ARG n 1 129 LEU n 1 130 GLN n 1 131 LYS n 1 132 LEU n 1 133 ALA n 1 134 ALA n 1 135 MET n 1 136 GLU n 1 137 GLY n 1 138 TYR n 1 139 THR n 1 140 GLU n 1 141 SER n 1 142 SER n 1 143 LYS n 1 144 LYS n 1 145 ILE n 1 146 SER n 1 147 PHE n 1 148 ILE n 1 149 LEU n 1 150 GLY n 1 151 ASP n 1 152 PHE n 1 153 LEU n 1 154 THR n 1 155 VAL n 1 156 ASP n 1 157 LEU n 1 158 SER n 1 159 GLU n 1 160 ALA n 1 161 THR n 1 162 LEU n 1 163 ILE n 1 164 PHE n 1 165 ILE n 1 166 ASN n 1 167 SER n 1 168 SER n 1 169 THR n 1 170 LEU n 1 171 PHE n 1 172 GLY n 1 173 ALA n 1 174 THR n 1 175 TRP n 1 176 GLU n 1 177 ALA n 1 178 LEU n 1 179 ASN n 1 180 THR n 1 181 ARG n 1 182 LEU n 1 183 ASN n 1 184 SER n 1 185 LEU n 1 186 PRO n 1 187 GLN n 1 188 LEU n 1 189 SER n 1 190 THR n 1 191 VAL n 1 192 ILE n 1 193 THR n 1 194 THR n 1 195 SER n 1 196 LYS n 1 197 THR n 1 198 LEU n 1 199 SER n 1 200 SER n 1 201 SER n 1 202 ARG n 1 203 PHE n 1 204 LYS n 1 205 LEU n 1 206 VAL n 1 207 THR n 1 208 ARG n 1 209 ALA n 1 210 LYS n 1 211 ILE n 1 212 GLN n 1 213 MET n 1 214 SER n 1 215 TRP n 1 216 GLY n 1 217 VAL n 1 218 VAL n 1 219 PHE n 1 220 ALA n 1 221 PHE n 1 222 ILE n 1 223 HIS n 1 224 LYS n 1 225 LYS n 1 226 GLU n 1 227 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 227 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene D1H98_04800 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Legionella pneumophila' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 446 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLZ 'L-peptide linking' n N-METHYL-LYSINE ? 'C7 H16 N2 O2' 160.214 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH non-polymer . S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 12 ? ? ? A . n A 1 2 LYS 2 13 ? ? ? A . n A 1 3 HIS 3 14 ? ? ? A . n A 1 4 HIS 4 15 ? ? ? A . n A 1 5 HIS 5 16 ? ? ? A . n A 1 6 HIS 6 17 ? ? ? A . n A 1 7 HIS 7 18 ? ? ? A . n A 1 8 HIS 8 19 ? ? ? A . n A 1 9 SER 9 20 ? ? ? A . n A 1 10 ALA 10 21 ? ? ? A . n A 1 11 GLY 11 22 ? ? ? A . n A 1 12 LEU 12 23 ? ? ? A . n A 1 13 GLU 13 24 ? ? ? A . n A 1 14 VAL 14 25 ? ? ? A . n A 1 15 LEU 15 26 ? ? ? A . n A 1 16 PHE 16 27 ? ? ? A . n A 1 17 GLN 17 28 ? ? ? A . n A 1 18 GLY 18 29 ? ? ? A . n A 1 19 PRO 19 30 ? ? ? A . n A 1 20 GLU 20 31 ? ? ? A . n A 1 21 LEU 21 32 ? ? ? A . n A 1 22 ARG 22 33 ? ? ? A . n A 1 23 ILE 23 34 34 ILE ILE A . n A 1 24 ASN 24 35 35 ASN ASN A . n A 1 25 ARG 25 36 36 ARG ARG A . n A 1 26 TRP 26 37 37 TRP TRP A . n A 1 27 GLN 27 38 38 GLN GLN A . n A 1 28 LYS 28 39 39 LYS LYS A . n A 1 29 MLZ 29 40 40 MLZ MLZ A . n A 1 30 LEU 30 41 41 LEU LEU A . n A 1 31 ASN 31 42 42 ASN ASN A . n A 1 32 LEU 32 43 43 LEU LEU A . n A 1 33 ARG 33 44 44 ARG ARG A . n A 1 34 HIS 34 45 45 HIS HIS A . n A 1 35 HIS 35 46 46 HIS HIS A . n A 1 36 ALA 36 47 47 ALA ALA A . n A 1 37 GLN 37 48 48 GLN GLN A . n A 1 38 ILE 38 49 49 ILE ILE A . n A 1 39 PHE 39 50 50 PHE PHE A . n A 1 40 HIS 40 51 51 HIS HIS A . n A 1 41 LEU 41 52 52 LEU LEU A . n A 1 42 LEU 42 53 53 LEU LEU A . n A 1 43 TYR 43 54 54 TYR TYR A . n A 1 44 ASP 44 55 55 ASP ASP A . n A 1 45 ASP 45 56 56 ASP ASP A . n A 1 46 VAL 46 57 57 VAL VAL A . n A 1 47 ASN 47 58 58 ASN ASN A . n A 1 48 GLY 48 59 59 GLY GLY A . n A 1 49 PHE 49 60 60 PHE PHE A . n A 1 50 MET 50 61 61 MET MET A . n A 1 51 ILE 51 62 62 ILE ILE A . n A 1 52 SER 52 63 63 SER SER A . n A 1 53 GLN 53 64 64 GLN GLN A . n A 1 54 GLN 54 65 65 GLN GLN A . n A 1 55 ALA 55 66 66 ALA ALA A . n A 1 56 ARG 56 67 67 ARG ARG A . n A 1 57 LYS 57 68 68 LYS LYS A . n A 1 58 ASN 58 69 69 ASN ASN A . n A 1 59 ARG 59 70 70 ARG ARG A . n A 1 60 ASP 60 71 71 ASP ASP A . n A 1 61 ALA 61 72 72 ALA ALA A . n A 1 62 ILE 62 73 73 ILE ILE A . n A 1 63 GLU 63 74 74 GLU GLU A . n A 1 64 TYR 64 75 75 TYR TYR A . n A 1 65 VAL 65 76 76 VAL VAL A . n A 1 66 TYR 66 77 77 TYR TYR A . n A 1 67 GLY 67 78 78 GLY GLY A . n A 1 68 GLU 68 79 79 GLU GLU A . n A 1 69 ILE 69 80 80 ILE ILE A . n A 1 70 GLU 70 81 81 GLU GLU A . n A 1 71 PHE 71 82 82 PHE PHE A . n A 1 72 LEU 72 83 83 LEU LEU A . n A 1 73 PRO 73 84 84 PRO PRO A . n A 1 74 PHE 74 85 85 PHE PHE A . n A 1 75 THR 75 86 86 THR THR A . n A 1 76 ALA 76 87 87 ALA ALA A . n A 1 77 LEU 77 88 88 LEU LEU A . n A 1 78 LEU 78 89 89 LEU LEU A . n A 1 79 SER 79 90 90 SER SER A . n A 1 80 MET 80 91 91 MET MET A . n A 1 81 ALA 81 92 92 ALA ALA A . n A 1 82 ASN 82 93 93 ASN ASN A . n A 1 83 ILE 83 94 94 ILE ILE A . n A 1 84 ASP 84 95 95 ASP ASP A . n A 1 85 HIS 85 96 96 HIS HIS A . n A 1 86 ASN 86 97 97 ASN ASN A . n A 1 87 THR 87 98 98 THR THR A . n A 1 88 VAL 88 99 99 VAL VAL A . n A 1 89 PHE 89 100 100 PHE PHE A . n A 1 90 TYR 90 101 101 TYR TYR A . n A 1 91 ASP 91 102 102 ASP ASP A . n A 1 92 LEU 92 103 103 LEU LEU A . n A 1 93 GLY 93 104 104 GLY GLY A . n A 1 94 SER 94 105 105 SER SER A . n A 1 95 GLY 95 106 106 GLY GLY A . n A 1 96 THR 96 107 107 THR THR A . n A 1 97 GLY 97 108 108 GLY GLY A . n A 1 98 LYS 98 109 109 LYS LYS A . n A 1 99 ALA 99 110 110 ALA ALA A . n A 1 100 VAL 100 111 111 VAL VAL A . n A 1 101 VAL 101 112 112 VAL VAL A . n A 1 102 ALA 102 113 113 ALA ALA A . n A 1 103 CYS 103 114 114 CYS CYS A . n A 1 104 ALA 104 115 115 ALA ALA A . n A 1 105 MET 105 116 116 MET MET A . n A 1 106 VAL 106 117 117 VAL VAL A . n A 1 107 TYR 107 118 118 TYR TYR A . n A 1 108 PRO 108 119 119 PRO PRO A . n A 1 109 VAL 109 120 120 VAL VAL A . n A 1 110 HIS 110 121 121 HIS HIS A . n A 1 111 LYS 111 122 122 LYS LYS A . n A 1 112 SER 112 123 123 SER SER A . n A 1 113 ILE 113 124 124 ILE ILE A . n A 1 114 GLY 114 125 125 GLY GLY A . n A 1 115 VAL 115 126 126 VAL VAL A . n A 1 116 GLU 116 127 127 GLU GLU A . n A 1 117 LEU 117 128 128 LEU LEU A . n A 1 118 PHE 118 129 129 PHE PHE A . n A 1 119 PRO 119 130 130 PRO PRO A . n A 1 120 ASN 120 131 131 ASN ASN A . n A 1 121 LEU 121 132 132 LEU LEU A . n A 1 122 HIS 122 133 133 HIS HIS A . n A 1 123 GLN 123 134 134 GLN GLN A . n A 1 124 CYS 124 135 135 CYS CYS A . n A 1 125 ALA 125 136 136 ALA ALA A . n A 1 126 CYS 126 137 137 CYS CYS A . n A 1 127 GLU 127 138 138 GLU GLU A . n A 1 128 ARG 128 139 139 ARG ARG A . n A 1 129 LEU 129 140 140 LEU LEU A . n A 1 130 GLN 130 141 141 GLN GLN A . n A 1 131 LYS 131 142 142 LYS LYS A . n A 1 132 LEU 132 143 143 LEU LEU A . n A 1 133 ALA 133 144 144 ALA ALA A . n A 1 134 ALA 134 145 145 ALA ALA A . n A 1 135 MET 135 146 146 MET MET A . n A 1 136 GLU 136 147 147 GLU GLU A . n A 1 137 GLY 137 148 148 GLY GLY A . n A 1 138 TYR 138 149 149 TYR TYR A . n A 1 139 THR 139 150 150 THR THR A . n A 1 140 GLU 140 151 151 GLU GLU A . n A 1 141 SER 141 152 152 SER SER A . n A 1 142 SER 142 153 153 SER SER A . n A 1 143 LYS 143 154 154 LYS LYS A . n A 1 144 LYS 144 155 155 LYS LYS A . n A 1 145 ILE 145 156 156 ILE ILE A . n A 1 146 SER 146 157 157 SER SER A . n A 1 147 PHE 147 158 158 PHE PHE A . n A 1 148 ILE 148 159 159 ILE ILE A . n A 1 149 LEU 149 160 160 LEU LEU A . n A 1 150 GLY 150 161 161 GLY GLY A . n A 1 151 ASP 151 162 162 ASP ASP A . n A 1 152 PHE 152 163 163 PHE PHE A . n A 1 153 LEU 153 164 164 LEU LEU A . n A 1 154 THR 154 165 165 THR THR A . n A 1 155 VAL 155 166 166 VAL VAL A . n A 1 156 ASP 156 167 167 ASP ASP A . n A 1 157 LEU 157 168 168 LEU LEU A . n A 1 158 SER 158 169 169 SER SER A . n A 1 159 GLU 159 170 170 GLU GLU A . n A 1 160 ALA 160 171 171 ALA ALA A . n A 1 161 THR 161 172 172 THR THR A . n A 1 162 LEU 162 173 173 LEU LEU A . n A 1 163 ILE 163 174 174 ILE ILE A . n A 1 164 PHE 164 175 175 PHE PHE A . n A 1 165 ILE 165 176 176 ILE ILE A . n A 1 166 ASN 166 177 177 ASN ASN A . n A 1 167 SER 167 178 178 SER SER A . n A 1 168 SER 168 179 179 SER SER A . n A 1 169 THR 169 180 180 THR THR A . n A 1 170 LEU 170 181 181 LEU LEU A . n A 1 171 PHE 171 182 182 PHE PHE A . n A 1 172 GLY 172 183 183 GLY GLY A . n A 1 173 ALA 173 184 184 ALA ALA A . n A 1 174 THR 174 185 185 THR THR A . n A 1 175 TRP 175 186 186 TRP TRP A . n A 1 176 GLU 176 187 187 GLU GLU A . n A 1 177 ALA 177 188 188 ALA ALA A . n A 1 178 LEU 178 189 189 LEU LEU A . n A 1 179 ASN 179 190 190 ASN ASN A . n A 1 180 THR 180 191 191 THR THR A . n A 1 181 ARG 181 192 192 ARG ARG A . n A 1 182 LEU 182 193 193 LEU LEU A . n A 1 183 ASN 183 194 194 ASN ASN A . n A 1 184 SER 184 195 195 SER SER A . n A 1 185 LEU 185 196 196 LEU LEU A . n A 1 186 PRO 186 197 197 PRO PRO A . n A 1 187 GLN 187 198 198 GLN GLN A . n A 1 188 LEU 188 199 199 LEU LEU A . n A 1 189 SER 189 200 200 SER SER A . n A 1 190 THR 190 201 201 THR THR A . n A 1 191 VAL 191 202 202 VAL VAL A . n A 1 192 ILE 192 203 203 ILE ILE A . n A 1 193 THR 193 204 204 THR THR A . n A 1 194 THR 194 205 205 THR THR A . n A 1 195 SER 195 206 206 SER SER A . n A 1 196 LYS 196 207 207 LYS LYS A . n A 1 197 THR 197 208 208 THR THR A . n A 1 198 LEU 198 209 209 LEU LEU A . n A 1 199 SER 199 210 210 SER SER A . n A 1 200 SER 200 211 211 SER SER A . n A 1 201 SER 201 212 212 SER SER A . n A 1 202 ARG 202 213 213 ARG ARG A . n A 1 203 PHE 203 214 214 PHE PHE A . n A 1 204 LYS 204 215 215 LYS LYS A . n A 1 205 LEU 205 216 216 LEU LEU A . n A 1 206 VAL 206 217 217 VAL VAL A . n A 1 207 THR 207 218 218 THR THR A . n A 1 208 ARG 208 219 219 ARG ARG A . n A 1 209 ALA 209 220 220 ALA ALA A . n A 1 210 LYS 210 221 221 LYS LYS A . n A 1 211 ILE 211 222 222 ILE ILE A . n A 1 212 GLN 212 223 223 GLN GLN A . n A 1 213 MET 213 224 224 MET MET A . n A 1 214 SER 214 225 225 SER SER A . n A 1 215 TRP 215 226 226 TRP TRP A . n A 1 216 GLY 216 227 227 GLY GLY A . n A 1 217 VAL 217 228 228 VAL VAL A . n A 1 218 VAL 218 229 229 VAL VAL A . n A 1 219 PHE 219 230 230 PHE PHE A . n A 1 220 ALA 220 231 231 ALA ALA A . n A 1 221 PHE 221 232 232 PHE PHE A . n A 1 222 ILE 222 233 233 ILE ILE A . n A 1 223 HIS 223 234 234 HIS HIS A . n A 1 224 LYS 224 235 235 LYS LYS A . n A 1 225 LYS 225 236 236 LYS LYS A . n A 1 226 GLU 226 237 ? ? ? A . n A 1 227 ASN 227 238 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH 1 301 301 SAH SAH A . C 3 HOH 1 401 401 HOH HOH A . C 3 HOH 2 402 402 HOH HOH A . C 3 HOH 3 403 403 HOH HOH A . C 3 HOH 4 404 404 HOH HOH A . C 3 HOH 5 405 405 HOH HOH A . C 3 HOH 6 406 406 HOH HOH A . C 3 HOH 7 407 407 HOH HOH A . C 3 HOH 8 408 408 HOH HOH A . C 3 HOH 9 409 409 HOH HOH A . C 3 HOH 10 410 410 HOH HOH A . C 3 HOH 11 411 411 HOH HOH A . C 3 HOH 12 412 412 HOH HOH A . C 3 HOH 13 413 413 HOH HOH A . C 3 HOH 14 414 414 HOH HOH A . C 3 HOH 15 415 415 HOH HOH A . C 3 HOH 16 416 416 HOH HOH A . C 3 HOH 17 417 417 HOH HOH A . C 3 HOH 18 418 418 HOH HOH A . C 3 HOH 19 419 419 HOH HOH A . C 3 HOH 20 420 420 HOH HOH A . C 3 HOH 21 421 421 HOH HOH A . C 3 HOH 22 422 422 HOH HOH A . C 3 HOH 23 423 423 HOH HOH A . C 3 HOH 24 424 424 HOH HOH A . C 3 HOH 25 425 425 HOH HOH A . C 3 HOH 26 426 426 HOH HOH A . C 3 HOH 27 427 427 HOH HOH A . C 3 HOH 28 428 428 HOH HOH A . C 3 HOH 29 429 429 HOH HOH A . C 3 HOH 30 430 430 HOH HOH A . C 3 HOH 31 431 431 HOH HOH A . C 3 HOH 32 432 432 HOH HOH A . C 3 HOH 33 433 433 HOH HOH A . C 3 HOH 34 434 434 HOH HOH A . C 3 HOH 35 435 435 HOH HOH A . C 3 HOH 36 436 436 HOH HOH A . C 3 HOH 37 437 437 HOH HOH A . C 3 HOH 38 438 438 HOH HOH A . C 3 HOH 39 439 439 HOH HOH A . C 3 HOH 40 440 440 HOH HOH A . C 3 HOH 41 441 441 HOH HOH A . C 3 HOH 42 442 442 HOH HOH A . C 3 HOH 43 443 443 HOH HOH A . C 3 HOH 44 444 444 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 34 ? CG1 ? A ILE 23 CG1 2 1 Y 1 A ILE 34 ? CG2 ? A ILE 23 CG2 3 1 Y 1 A ILE 34 ? CD1 ? A ILE 23 CD1 4 1 Y 1 A ASN 35 ? CG ? A ASN 24 CG 5 1 Y 1 A ASN 35 ? OD1 ? A ASN 24 OD1 6 1 Y 1 A ASN 35 ? ND2 ? A ASN 24 ND2 7 1 Y 1 A LYS 236 ? CG ? A LYS 225 CG 8 1 Y 1 A LYS 236 ? CD ? A LYS 225 CD 9 1 Y 1 A LYS 236 ? CE ? A LYS 225 CE 10 1 Y 1 A LYS 236 ? NZ ? A LYS 225 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.2_5419 ? 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.entry_id 9NE1 _cell.length_a 69.444 _cell.length_b 69.444 _cell.length_c 80.769 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9NE1 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9NE1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'HEPES, pH 8, TCEP, PEG3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 107 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-02-28 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'multilayer optics Varimax-HF' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 40.56 _reflns.entry_id 9NE1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 28.18 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12928 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.65 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.214 _reflns.pdbx_Rpim_I_all 0.118 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 37738 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.991 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.176 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.22 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all 5300 _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1803 _reflns_shell.percent_possible_obs 94.2 _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.pdbx_chi_squared 0.81 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs 0.4 _reflns_shell.pdbx_Rrim_I_all 2.943 _reflns_shell.pdbx_Rpim_I_all 1.617 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.160 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 2.433 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 9NE1 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11969 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.18 _refine.ls_d_res_high 2.11 _refine.ls_percent_reflns_obs 89.1 _refine.ls_R_factor_obs 0.222 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.270 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.290 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1605 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 1675 _refine_hist.d_res_high 2.11 _refine_hist.d_res_low 28.18 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 1677 'X-RAY DIFFRACTION' ? f_angle_d 0.595 ? ? 2272 'X-RAY DIFFRACTION' ? f_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? f_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.1100 2.2200 1199 0.4013 68.00 0.4327 . . 86 . . . . 'X-RAY DIFFRACTION' . 2.2200 2.3600 1315 0.3810 77.00 0.4320 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.3600 2.5400 1632 0.3415 94.00 0.3561 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.5400 2.8000 1662 0.2984 96.00 0.3580 . . 162 . . . . 'X-RAY DIFFRACTION' . 2.8000 3.2000 1693 0.2484 97.00 0.3217 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.2000 4.0300 1744 0.1841 98.00 0.2512 . . 159 . . . . 'X-RAY DIFFRACTION' . 4.0300 28.1800 1732 0.1485 93.00 0.1947 . . 152 . . . . # _struct.entry_id 9NE1 _struct.title 'Crystal structure of a bacterial DOT1L methyl-transferase in complex with S-adenosyl homocysteine' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9NE1 _struct_keywords.text 'methyl-transferase, product complex, bacteria, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A3A6VYM1_LEGPN _struct_ref.pdbx_db_accession A0A3A6VYM1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ELRINRWQKKLNLRHHAQIFHLLYDDVNGFMISQQARKNRDAIEYVYGEIEFLPFTALLSMANIDHNTVFYDLGSGTGKA VVACAMVYPVHKSIGVELFPNLHQCACERLQKLAAMEGYTESSKKISFILGDFLTVDLSEATLIFINSSTLFGATWEALN TRLNSLPQLSTVITTSKTLSSSRFKLVTRAKIQMSWGVVFAFIHKKEN ; _struct_ref.pdbx_align_begin 31 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9NE1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 227 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A3A6VYM1 _struct_ref_seq.db_align_beg 31 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 31 _struct_ref_seq.pdbx_auth_seq_align_end 238 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9NE1 MET A 1 ? UNP A0A3A6VYM1 ? ? 'expression tag' 12 1 1 9NE1 LYS A 2 ? UNP A0A3A6VYM1 ? ? 'expression tag' 13 2 1 9NE1 HIS A 3 ? UNP A0A3A6VYM1 ? ? 'expression tag' 14 3 1 9NE1 HIS A 4 ? UNP A0A3A6VYM1 ? ? 'expression tag' 15 4 1 9NE1 HIS A 5 ? UNP A0A3A6VYM1 ? ? 'expression tag' 16 5 1 9NE1 HIS A 6 ? UNP A0A3A6VYM1 ? ? 'expression tag' 17 6 1 9NE1 HIS A 7 ? UNP A0A3A6VYM1 ? ? 'expression tag' 18 7 1 9NE1 HIS A 8 ? UNP A0A3A6VYM1 ? ? 'expression tag' 19 8 1 9NE1 SER A 9 ? UNP A0A3A6VYM1 ? ? 'expression tag' 20 9 1 9NE1 ALA A 10 ? UNP A0A3A6VYM1 ? ? 'expression tag' 21 10 1 9NE1 GLY A 11 ? UNP A0A3A6VYM1 ? ? 'expression tag' 22 11 1 9NE1 LEU A 12 ? UNP A0A3A6VYM1 ? ? 'expression tag' 23 12 1 9NE1 GLU A 13 ? UNP A0A3A6VYM1 ? ? 'expression tag' 24 13 1 9NE1 VAL A 14 ? UNP A0A3A6VYM1 ? ? 'expression tag' 25 14 1 9NE1 LEU A 15 ? UNP A0A3A6VYM1 ? ? 'expression tag' 26 15 1 9NE1 PHE A 16 ? UNP A0A3A6VYM1 ? ? 'expression tag' 27 16 1 9NE1 GLN A 17 ? UNP A0A3A6VYM1 ? ? 'expression tag' 28 17 1 9NE1 GLY A 18 ? UNP A0A3A6VYM1 ? ? 'expression tag' 29 18 1 9NE1 PRO A 19 ? UNP A0A3A6VYM1 ? ? 'expression tag' 30 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 9560 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 31 ? TYR A 43 ? ASN A 42 TYR A 54 1 ? 13 HELX_P HELX_P2 AA2 ASN A 47 ? ARG A 56 ? ASN A 58 ARG A 67 1 ? 10 HELX_P HELX_P3 AA3 ALA A 61 ? VAL A 65 ? ALA A 72 VAL A 76 5 ? 5 HELX_P HELX_P4 AA4 GLU A 70 ? SER A 79 ? GLU A 81 SER A 90 1 ? 10 HELX_P HELX_P5 AA5 GLY A 97 ? TYR A 107 ? GLY A 108 TYR A 118 1 ? 11 HELX_P HELX_P6 AA6 PHE A 118 ? MET A 135 ? PHE A 129 MET A 146 1 ? 18 HELX_P HELX_P7 AA7 GLU A 140 ? LYS A 143 ? GLU A 151 LYS A 154 5 ? 4 HELX_P HELX_P8 AA8 PHE A 171 ? ALA A 173 ? PHE A 182 ALA A 184 5 ? 3 HELX_P HELX_P9 AA9 THR A 174 ? SER A 184 ? THR A 185 SER A 195 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 28 C ? ? ? 1_555 A MLZ 29 N ? ? A LYS 39 A MLZ 40 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MLZ 29 C ? ? ? 1_555 A LEU 30 N ? ? A MLZ 40 A LEU 41 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id MLZ _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 29 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id MLZ _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 40 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id MLZ _pdbx_modification_feature.type Methylation _pdbx_modification_feature.category 'Named protein modification' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 145 ? LEU A 149 ? ILE A 156 LEU A 160 AA1 2 LYS A 111 ? GLU A 116 ? LYS A 122 GLU A 127 AA1 3 VAL A 88 ? LEU A 92 ? VAL A 99 LEU A 103 AA1 4 LEU A 162 ? ILE A 165 ? LEU A 173 ILE A 176 AA1 5 THR A 190 ? THR A 194 ? THR A 201 THR A 205 AA1 6 GLY A 216 ? LYS A 224 ? GLY A 227 LYS A 235 AA1 7 LYS A 204 ? MET A 213 ? LYS A 215 MET A 224 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 148 ? O ILE A 159 N GLY A 114 ? N GLY A 125 AA1 2 3 O ILE A 113 ? O ILE A 124 N PHE A 89 ? N PHE A 100 AA1 3 4 N TYR A 90 ? N TYR A 101 O PHE A 164 ? O PHE A 175 AA1 4 5 N ILE A 163 ? N ILE A 174 O ILE A 192 ? O ILE A 203 AA1 5 6 N THR A 193 ? N THR A 204 O PHE A 221 ? O PHE A 232 AA1 6 7 O ALA A 220 ? O ALA A 231 N ALA A 209 ? N ALA A 220 # _pdbx_entry_details.entry_id 9NE1 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 35 ? ? -79.11 -168.29 2 1 ARG A 70 ? ? -141.34 44.29 3 1 ASN A 93 ? ? 60.93 60.93 4 1 SER A 206 ? ? 72.97 -12.32 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MLZ _pdbx_struct_mod_residue.label_seq_id 29 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MLZ _pdbx_struct_mod_residue.auth_seq_id 40 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details 'modified residue' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+1/3 3 -x+y,-x,z+2/3 4 x-y,-y,-z+2/3 5 -x,-x+y,-z+1/3 6 y,x,-z # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3]_esd _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3]_esd 'X-RAY DIFFRACTION' 1 ? refined -34.0526 -14.8484 23.5184 0.4585 0.4013 0.2997 0.0315 0.0511 0.0075 0.0991 0.5141 0.0916 0.2219 -0.0436 -0.0620 -0.0242 -0.0090 -0.2032 0.6356 -0.0589 0.1219 0.3731 0.6932 -0.0051 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 ? refined -34.1237 -6.3975 7.7023 0.4241 0.2589 0.3010 0.1080 0.0068 0.0060 1.3316 1.3245 1.3939 0.1136 -1.2297 0.2066 0.1066 0.1324 0.1543 -0.0334 -0.0259 -0.0244 -0.1292 0.0005 0.0000 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 ? refined -23.2548 -2.2962 8.4211 0.3737 0.2860 0.3723 -0.0018 0.0684 -0.0395 1.0346 1.6392 2.2864 -0.4062 0.5151 -0.1211 0.0991 0.0669 0.1840 -0.1655 0.1440 -0.3894 -0.1596 0.6836 0.0284 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 34 THROUGH 53 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 54 THROUGH 145 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 146 THROUGH 236 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 12 ? A MET 1 2 1 Y 1 A LYS 13 ? A LYS 2 3 1 Y 1 A HIS 14 ? A HIS 3 4 1 Y 1 A HIS 15 ? A HIS 4 5 1 Y 1 A HIS 16 ? A HIS 5 6 1 Y 1 A HIS 17 ? A HIS 6 7 1 Y 1 A HIS 18 ? A HIS 7 8 1 Y 1 A HIS 19 ? A HIS 8 9 1 Y 1 A SER 20 ? A SER 9 10 1 Y 1 A ALA 21 ? A ALA 10 11 1 Y 1 A GLY 22 ? A GLY 11 12 1 Y 1 A LEU 23 ? A LEU 12 13 1 Y 1 A GLU 24 ? A GLU 13 14 1 Y 1 A VAL 25 ? A VAL 14 15 1 Y 1 A LEU 26 ? A LEU 15 16 1 Y 1 A PHE 27 ? A PHE 16 17 1 Y 1 A GLN 28 ? A GLN 17 18 1 Y 1 A GLY 29 ? A GLY 18 19 1 Y 1 A PRO 30 ? A PRO 19 20 1 Y 1 A GLU 31 ? A GLU 20 21 1 Y 1 A LEU 32 ? A LEU 21 22 1 Y 1 A ARG 33 ? A ARG 22 23 1 Y 1 A GLU 237 ? A GLU 226 24 1 Y 1 A ASN 238 ? A ASN 227 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MLZ N N N N 250 MLZ CA C N S 251 MLZ CB C N N 252 MLZ CG C N N 253 MLZ CD C N N 254 MLZ CE C N N 255 MLZ NZ N N N 256 MLZ CM C N N 257 MLZ C C N N 258 MLZ O O N N 259 MLZ OXT O N N 260 MLZ H H N N 261 MLZ H2 H N N 262 MLZ HA H N N 263 MLZ HB2 H N N 264 MLZ HB3 H N N 265 MLZ HG2 H N N 266 MLZ HG3 H N N 267 MLZ HD2 H N N 268 MLZ HD3 H N N 269 MLZ HE2 H N N 270 MLZ HE3 H N N 271 MLZ HZ H N N 272 MLZ HCM1 H N N 273 MLZ HCM2 H N N 274 MLZ HCM3 H N N 275 MLZ HXT H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SAH N N N N 317 SAH CA C N S 318 SAH CB C N N 319 SAH CG C N N 320 SAH SD S N N 321 SAH C C N N 322 SAH O O N N 323 SAH OXT O N N 324 SAH "C5'" C N N 325 SAH "C4'" C N S 326 SAH "O4'" O N N 327 SAH "C3'" C N S 328 SAH "O3'" O N N 329 SAH "C2'" C N R 330 SAH "O2'" O N N 331 SAH "C1'" C N R 332 SAH N9 N Y N 333 SAH C8 C Y N 334 SAH N7 N Y N 335 SAH C5 C Y N 336 SAH C6 C Y N 337 SAH N6 N N N 338 SAH N1 N Y N 339 SAH C2 C Y N 340 SAH N3 N Y N 341 SAH C4 C Y N 342 SAH HN1 H N N 343 SAH HN2 H N N 344 SAH HA H N N 345 SAH HB1 H N N 346 SAH HB2 H N N 347 SAH HG1 H N N 348 SAH HG2 H N N 349 SAH HXT H N N 350 SAH "H5'1" H N N 351 SAH "H5'2" H N N 352 SAH "H4'" H N N 353 SAH "H3'" H N N 354 SAH "HO3'" H N N 355 SAH "H2'" H N N 356 SAH "HO2'" H N N 357 SAH "H1'" H N N 358 SAH H8 H N N 359 SAH HN61 H N N 360 SAH HN62 H N N 361 SAH H2 H N N 362 SER N N N N 363 SER CA C N S 364 SER C C N N 365 SER O O N N 366 SER CB C N N 367 SER OG O N N 368 SER OXT O N N 369 SER H H N N 370 SER H2 H N N 371 SER HA H N N 372 SER HB2 H N N 373 SER HB3 H N N 374 SER HG H N N 375 SER HXT H N N 376 THR N N N N 377 THR CA C N S 378 THR C C N N 379 THR O O N N 380 THR CB C N R 381 THR OG1 O N N 382 THR CG2 C N N 383 THR OXT O N N 384 THR H H N N 385 THR H2 H N N 386 THR HA H N N 387 THR HB H N N 388 THR HG1 H N N 389 THR HG21 H N N 390 THR HG22 H N N 391 THR HG23 H N N 392 THR HXT H N N 393 TRP N N N N 394 TRP CA C N S 395 TRP C C N N 396 TRP O O N N 397 TRP CB C N N 398 TRP CG C Y N 399 TRP CD1 C Y N 400 TRP CD2 C Y N 401 TRP NE1 N Y N 402 TRP CE2 C Y N 403 TRP CE3 C Y N 404 TRP CZ2 C Y N 405 TRP CZ3 C Y N 406 TRP CH2 C Y N 407 TRP OXT O N N 408 TRP H H N N 409 TRP H2 H N N 410 TRP HA H N N 411 TRP HB2 H N N 412 TRP HB3 H N N 413 TRP HD1 H N N 414 TRP HE1 H N N 415 TRP HE3 H N N 416 TRP HZ2 H N N 417 TRP HZ3 H N N 418 TRP HH2 H N N 419 TRP HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 VAL N N N N 445 VAL CA C N S 446 VAL C C N N 447 VAL O O N N 448 VAL CB C N N 449 VAL CG1 C N N 450 VAL CG2 C N N 451 VAL OXT O N N 452 VAL H H N N 453 VAL H2 H N N 454 VAL HA H N N 455 VAL HB H N N 456 VAL HG11 H N N 457 VAL HG12 H N N 458 VAL HG13 H N N 459 VAL HG21 H N N 460 VAL HG22 H N N 461 VAL HG23 H N N 462 VAL HXT H N N 463 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 MLZ N CA sing N N 237 MLZ N H sing N N 238 MLZ N H2 sing N N 239 MLZ CA CB sing N N 240 MLZ CA C sing N N 241 MLZ CA HA sing N N 242 MLZ CB CG sing N N 243 MLZ CB HB2 sing N N 244 MLZ CB HB3 sing N N 245 MLZ CG CD sing N N 246 MLZ CG HG2 sing N N 247 MLZ CG HG3 sing N N 248 MLZ CD CE sing N N 249 MLZ CD HD2 sing N N 250 MLZ CD HD3 sing N N 251 MLZ CE NZ sing N N 252 MLZ CE HE2 sing N N 253 MLZ CE HE3 sing N N 254 MLZ NZ CM sing N N 255 MLZ NZ HZ sing N N 256 MLZ CM HCM1 sing N N 257 MLZ CM HCM2 sing N N 258 MLZ CM HCM3 sing N N 259 MLZ C O doub N N 260 MLZ C OXT sing N N 261 MLZ OXT HXT sing N N 262 PHE N CA sing N N 263 PHE N H sing N N 264 PHE N H2 sing N N 265 PHE CA C sing N N 266 PHE CA CB sing N N 267 PHE CA HA sing N N 268 PHE C O doub N N 269 PHE C OXT sing N N 270 PHE CB CG sing N N 271 PHE CB HB2 sing N N 272 PHE CB HB3 sing N N 273 PHE CG CD1 doub Y N 274 PHE CG CD2 sing Y N 275 PHE CD1 CE1 sing Y N 276 PHE CD1 HD1 sing N N 277 PHE CD2 CE2 doub Y N 278 PHE CD2 HD2 sing N N 279 PHE CE1 CZ doub Y N 280 PHE CE1 HE1 sing N N 281 PHE CE2 CZ sing Y N 282 PHE CE2 HE2 sing N N 283 PHE CZ HZ sing N N 284 PHE OXT HXT sing N N 285 PRO N CA sing N N 286 PRO N CD sing N N 287 PRO N H sing N N 288 PRO CA C sing N N 289 PRO CA CB sing N N 290 PRO CA HA sing N N 291 PRO C O doub N N 292 PRO C OXT sing N N 293 PRO CB CG sing N N 294 PRO CB HB2 sing N N 295 PRO CB HB3 sing N N 296 PRO CG CD sing N N 297 PRO CG HG2 sing N N 298 PRO CG HG3 sing N N 299 PRO CD HD2 sing N N 300 PRO CD HD3 sing N N 301 PRO OXT HXT sing N N 302 SAH N CA sing N N 303 SAH N HN1 sing N N 304 SAH N HN2 sing N N 305 SAH CA CB sing N N 306 SAH CA C sing N N 307 SAH CA HA sing N N 308 SAH CB CG sing N N 309 SAH CB HB1 sing N N 310 SAH CB HB2 sing N N 311 SAH CG SD sing N N 312 SAH CG HG1 sing N N 313 SAH CG HG2 sing N N 314 SAH SD "C5'" sing N N 315 SAH C O doub N N 316 SAH C OXT sing N N 317 SAH OXT HXT sing N N 318 SAH "C5'" "C4'" sing N N 319 SAH "C5'" "H5'1" sing N N 320 SAH "C5'" "H5'2" sing N N 321 SAH "C4'" "O4'" sing N N 322 SAH "C4'" "C3'" sing N N 323 SAH "C4'" "H4'" sing N N 324 SAH "O4'" "C1'" sing N N 325 SAH "C3'" "O3'" sing N N 326 SAH "C3'" "C2'" sing N N 327 SAH "C3'" "H3'" sing N N 328 SAH "O3'" "HO3'" sing N N 329 SAH "C2'" "O2'" sing N N 330 SAH "C2'" "C1'" sing N N 331 SAH "C2'" "H2'" sing N N 332 SAH "O2'" "HO2'" sing N N 333 SAH "C1'" N9 sing N N 334 SAH "C1'" "H1'" sing N N 335 SAH N9 C8 sing Y N 336 SAH N9 C4 sing Y N 337 SAH C8 N7 doub Y N 338 SAH C8 H8 sing N N 339 SAH N7 C5 sing Y N 340 SAH C5 C6 sing Y N 341 SAH C5 C4 doub Y N 342 SAH C6 N6 sing N N 343 SAH C6 N1 doub Y N 344 SAH N6 HN61 sing N N 345 SAH N6 HN62 sing N N 346 SAH N1 C2 sing Y N 347 SAH C2 N3 doub Y N 348 SAH C2 H2 sing N N 349 SAH N3 C4 sing Y N 350 SER N CA sing N N 351 SER N H sing N N 352 SER N H2 sing N N 353 SER CA C sing N N 354 SER CA CB sing N N 355 SER CA HA sing N N 356 SER C O doub N N 357 SER C OXT sing N N 358 SER CB OG sing N N 359 SER CB HB2 sing N N 360 SER CB HB3 sing N N 361 SER OG HG sing N N 362 SER OXT HXT sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # _pdbx_audit_support.funding_organization 'Pasteur Institute' _pdbx_audit_support.country France _pdbx_audit_support.grant_number 'PTR 2020 #395' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 31 2 1' _space_group.name_Hall ;P 31 2" ; _space_group.IT_number 152 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 9NE1 _atom_sites.fract_transf_matrix[1][1] 0.014400 _atom_sites.fract_transf_matrix[1][2] 0.008314 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016628 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012381 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #