data_9NTT # _entry.id 9NTT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9NTT pdb_00009ntt 10.2210/pdb9ntt/pdb WWPDB D_1000294088 ? ? EMDB EMD-49762 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-01-14 ? 2 'EM metadata' 1 0 2026-01-14 ? 3 'Half map' 1 0 2026-01-14 1 4 'Half map' 1 0 2026-01-14 2 5 Image 1 0 2026-01-14 ? 6 'Primary map' 1 0 2026-01-14 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'THR B 110 HAS WRONG CHIRALITY AT ATOM CA' 2 ;Residues ARG A 39 and GLY A 59 that are next to each other in the sample sequence are not properly linked: distance between C and N is 21.14 A. ; 3 ;Residues ALA A 114 and PHE A 115 that are next to each other in the sample sequence are not properly linked: distance between C and N is 7.92 A. ; 4 ;Residues GLY A 186 and LEU A 192 that are next to each other in the sample sequence are not properly linked: distance between C and N is 10.30 A. ; 5 ;Residues GLY A 209 and PHE A 211 that are next to each other in the sample sequence are not properly linked: distance between C and N is 3.41 A. ; 6 ;Residues THR A 226 and ILE A 228 that are next to each other in the sample sequence are not properly linked: distance between C and N is 6.51 A. ; 7 ;Residues VAL A 239 and ASN A 241 that are next to each other in the sample sequence are not properly linked: distance between C and N is 3.26 A. ; 8 ;Residues LYS A 247 and SER A 249 that are next to each other in the sample sequence are not properly linked: distance between C and N is 4.51 A. ; 9 ;Residues MET A 310 and ASP A 315 that are next to each other in the sample sequence are not properly linked: distance between C and N is 10.84 A. ; 10 ;Residues CYS A 349 and THR A 383 that are next to each other in the sample sequence are not properly linked: distance between C and N is 56.56 A. ; 11 ;Residues GLN A 434 and PRO A 457 that are next to each other in the sample sequence are not properly linked: distance between C and N is 27.52 A. ; 12 ;Residues LEU A 466 and HIS A 468 that are next to each other in the sample sequence are not properly linked: distance between C and N is 3.27 A. ; 13 ;Residues GLY B 16 and LEU B 19 that are next to each other in the sample sequence are not properly linked: distance between C and N is 7.88 A. ; # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9NTT _pdbx_database_status.recvd_initial_deposition_date 2025-03-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details ;Identification and non-clinical characterization of SAR444200, a novel anti-GPC3 T-cell engager for the treatment of GPC3+ solid tumors ; _pdbx_database_related.db_id EMD-49762 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email joseph.batchelor@sanofi.com _pdbx_contact_author.name_first Joseph _pdbx_contact_author.name_last Batchelor _pdbx_contact_author.name_mi D _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-9701-9255 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Batchelor, J.D.' 1 0000-0002-9701-9255 'Svidritskiy, E.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol.Cancer Ther.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1538-8514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Identification and non-clinical characterization of SAR444200, a novel anti-GPC3 NANOBODY® T-cell engager, for the treatment of GPC3+ solid tumors. ; _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1158/1535-7163.MCT-24-1049 _citation.pdbx_database_id_PubMed 41041827 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Meoni, P.' 1 0000-0001-5811-1764 primary 'Vintem, A.P.B.' 2 0009-0005-2999-6918 primary 'Cortez-Retamozo, V.F.' 3 0009-0009-8981-0168 primary 'Jacobs, J.' 4 0009-0003-1919-7720 primary 'De Tavernier, E.' 5 0000-0002-1903-3027 primary 'Fiorentini, P.' 6 0009-0008-1305-3845 primary 'Van Hoorick, D.' 7 0009-0000-3232-6417 primary 'Batchelor, J.D.' 8 0000-0002-9701-9255 primary 'Svidritskiy, E.' 9 0009-0002-9442-3831 primary 'Qiu, Y.' 10 0000-0002-2078-0513 primary 'Dejonckheere, E.' 11 0009-0000-7559-7719 primary 'Li, A.' 12 0009-0001-6360-3381 primary 'Pao, L.I.' 13 0000-0002-7626-2782 primary 'Buyse, M.A.' 14 0009-0009-7507-0613 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Glypican-3 40474.969 1 ? ? ? ? 2 polymer man A0226018C08 13820.490 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GTR2-2,Intestinal protein OCI-5,MXR7' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;CHQVRGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNN YPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLDINECLRGARRDLKVFGFPKLIMTQV SKSLQVTIFLQALNLGIEVNTTDHLKSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILS LEELVNGMDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCTLSSRRRELIQKLKSFISFYSALPGYICSHSPVAEND TLCWNGQELVERYSQPVVSQIIDKLHINQLLRTMS ; ;CHQVRGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNN YPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLDINECLRGARRDLKVFGFPKLIMTQV SKSLQVTIFLQALNLGIEVNTTDHLKSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILS LEELVNGMDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCTLSSRRRELIQKLKSFISFYSALPGYICSHSPVAEND TLCWNGQELVERYSQPVVSQIIDKLHINQLLRTMS ; A ? 2 'polypeptide(L)' no no ;EVQLVESGGGLVQPGLRLSCVASGFTFSSFAMTWVRRPPGKGLEWVATITNGGVTSYRDSVKGRFTISRDNAKNTLYLEM TSLNPEDTAVYICANARRTGPRAPTDIGSYRGQGTLVTVSSHHHHHH ; ;EVQLVESGGGLVQPGLRLSCVASGFTFSSFAMTWVRRPPGKGLEWVATITNGGVTSYRDSVKGRFTISRDNAKNTLYLEM TSLNPEDTAVYICANARRTGPRAPTDIGSYRGQGTLVTVSSHHHHHH ; B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 HIS n 1 3 GLN n 1 4 VAL n 1 5 ARG n 1 6 GLY n 1 7 SER n 1 8 ASP n 1 9 LEU n 1 10 GLN n 1 11 VAL n 1 12 CYS n 1 13 LEU n 1 14 PRO n 1 15 LYS n 1 16 GLY n 1 17 PRO n 1 18 THR n 1 19 CYS n 1 20 CYS n 1 21 SER n 1 22 ARG n 1 23 LYS n 1 24 MET n 1 25 GLU n 1 26 GLU n 1 27 LYS n 1 28 TYR n 1 29 GLN n 1 30 LEU n 1 31 THR n 1 32 ALA n 1 33 ARG n 1 34 LEU n 1 35 ASN n 1 36 MET n 1 37 GLU n 1 38 GLN n 1 39 LEU n 1 40 LEU n 1 41 GLN n 1 42 SER n 1 43 ALA n 1 44 SER n 1 45 MET n 1 46 GLU n 1 47 LEU n 1 48 LYS n 1 49 PHE n 1 50 LEU n 1 51 ILE n 1 52 ILE n 1 53 GLN n 1 54 ASN n 1 55 ALA n 1 56 ALA n 1 57 VAL n 1 58 PHE n 1 59 GLN n 1 60 GLU n 1 61 ALA n 1 62 PHE n 1 63 GLU n 1 64 ILE n 1 65 VAL n 1 66 VAL n 1 67 ARG n 1 68 HIS n 1 69 ALA n 1 70 LYS n 1 71 ASN n 1 72 TYR n 1 73 THR n 1 74 ASN n 1 75 ALA n 1 76 MET n 1 77 PHE n 1 78 LYS n 1 79 ASN n 1 80 ASN n 1 81 TYR n 1 82 PRO n 1 83 SER n 1 84 LEU n 1 85 THR n 1 86 PRO n 1 87 GLN n 1 88 ALA n 1 89 PHE n 1 90 GLU n 1 91 PHE n 1 92 VAL n 1 93 GLY n 1 94 GLU n 1 95 PHE n 1 96 PHE n 1 97 THR n 1 98 ASP n 1 99 VAL n 1 100 SER n 1 101 LEU n 1 102 TYR n 1 103 ILE n 1 104 LEU n 1 105 GLY n 1 106 SER n 1 107 ASP n 1 108 ILE n 1 109 ASN n 1 110 VAL n 1 111 ASP n 1 112 ASP n 1 113 MET n 1 114 VAL n 1 115 ASN n 1 116 GLU n 1 117 LEU n 1 118 PHE n 1 119 ASP n 1 120 SER n 1 121 LEU n 1 122 PHE n 1 123 PRO n 1 124 VAL n 1 125 ILE n 1 126 TYR n 1 127 THR n 1 128 GLN n 1 129 LEU n 1 130 MET n 1 131 ASN n 1 132 PRO n 1 133 GLY n 1 134 LEU n 1 135 ASP n 1 136 ILE n 1 137 ASN n 1 138 GLU n 1 139 CYS n 1 140 LEU n 1 141 ARG n 1 142 GLY n 1 143 ALA n 1 144 ARG n 1 145 ARG n 1 146 ASP n 1 147 LEU n 1 148 LYS n 1 149 VAL n 1 150 PHE n 1 151 GLY n 1 152 PHE n 1 153 PRO n 1 154 LYS n 1 155 LEU n 1 156 ILE n 1 157 MET n 1 158 THR n 1 159 GLN n 1 160 VAL n 1 161 SER n 1 162 LYS n 1 163 SER n 1 164 LEU n 1 165 GLN n 1 166 VAL n 1 167 THR n 1 168 ILE n 1 169 PHE n 1 170 LEU n 1 171 GLN n 1 172 ALA n 1 173 LEU n 1 174 ASN n 1 175 LEU n 1 176 GLY n 1 177 ILE n 1 178 GLU n 1 179 VAL n 1 180 ASN n 1 181 THR n 1 182 THR n 1 183 ASP n 1 184 HIS n 1 185 LEU n 1 186 LYS n 1 187 SER n 1 188 LYS n 1 189 ASP n 1 190 CYS n 1 191 GLY n 1 192 ARG n 1 193 MET n 1 194 LEU n 1 195 THR n 1 196 ARG n 1 197 MET n 1 198 TRP n 1 199 TYR n 1 200 CYS n 1 201 SER n 1 202 TYR n 1 203 CYS n 1 204 GLN n 1 205 GLY n 1 206 LEU n 1 207 MET n 1 208 MET n 1 209 VAL n 1 210 LYS n 1 211 PRO n 1 212 CYS n 1 213 GLY n 1 214 GLY n 1 215 TYR n 1 216 CYS n 1 217 ASN n 1 218 VAL n 1 219 VAL n 1 220 MET n 1 221 GLN n 1 222 GLY n 1 223 CYS n 1 224 MET n 1 225 ALA n 1 226 GLY n 1 227 VAL n 1 228 VAL n 1 229 GLU n 1 230 ILE n 1 231 ASP n 1 232 LYS n 1 233 TYR n 1 234 TRP n 1 235 ARG n 1 236 GLU n 1 237 TYR n 1 238 ILE n 1 239 LEU n 1 240 SER n 1 241 LEU n 1 242 GLU n 1 243 GLU n 1 244 LEU n 1 245 VAL n 1 246 ASN n 1 247 GLY n 1 248 MET n 1 249 ASP n 1 250 MET n 1 251 GLU n 1 252 ASN n 1 253 VAL n 1 254 LEU n 1 255 LEU n 1 256 GLY n 1 257 LEU n 1 258 PHE n 1 259 SER n 1 260 THR n 1 261 ILE n 1 262 HIS n 1 263 ASP n 1 264 SER n 1 265 ILE n 1 266 GLN n 1 267 TYR n 1 268 VAL n 1 269 GLN n 1 270 LYS n 1 271 ASN n 1 272 ALA n 1 273 GLY n 1 274 LYS n 1 275 LEU n 1 276 THR n 1 277 THR n 1 278 THR n 1 279 ILE n 1 280 GLY n 1 281 LYS n 1 282 LEU n 1 283 CYS n 1 284 THR n 1 285 LEU n 1 286 SER n 1 287 SER n 1 288 ARG n 1 289 ARG n 1 290 ARG n 1 291 GLU n 1 292 LEU n 1 293 ILE n 1 294 GLN n 1 295 LYS n 1 296 LEU n 1 297 LYS n 1 298 SER n 1 299 PHE n 1 300 ILE n 1 301 SER n 1 302 PHE n 1 303 TYR n 1 304 SER n 1 305 ALA n 1 306 LEU n 1 307 PRO n 1 308 GLY n 1 309 TYR n 1 310 ILE n 1 311 CYS n 1 312 SER n 1 313 HIS n 1 314 SER n 1 315 PRO n 1 316 VAL n 1 317 ALA n 1 318 GLU n 1 319 ASN n 1 320 ASP n 1 321 THR n 1 322 LEU n 1 323 CYS n 1 324 TRP n 1 325 ASN n 1 326 GLY n 1 327 GLN n 1 328 GLU n 1 329 LEU n 1 330 VAL n 1 331 GLU n 1 332 ARG n 1 333 TYR n 1 334 SER n 1 335 GLN n 1 336 PRO n 1 337 VAL n 1 338 VAL n 1 339 SER n 1 340 GLN n 1 341 ILE n 1 342 ILE n 1 343 ASP n 1 344 LYS n 1 345 LEU n 1 346 HIS n 1 347 ILE n 1 348 ASN n 1 349 GLN n 1 350 LEU n 1 351 LEU n 1 352 ARG n 1 353 THR n 1 354 MET n 1 355 SER n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 LEU n 2 17 ARG n 2 18 LEU n 2 19 SER n 2 20 CYS n 2 21 VAL n 2 22 ALA n 2 23 SER n 2 24 GLY n 2 25 PHE n 2 26 THR n 2 27 PHE n 2 28 SER n 2 29 SER n 2 30 PHE n 2 31 ALA n 2 32 MET n 2 33 THR n 2 34 TRP n 2 35 VAL n 2 36 ARG n 2 37 ARG n 2 38 PRO n 2 39 PRO n 2 40 GLY n 2 41 LYS n 2 42 GLY n 2 43 LEU n 2 44 GLU n 2 45 TRP n 2 46 VAL n 2 47 ALA n 2 48 THR n 2 49 ILE n 2 50 THR n 2 51 ASN n 2 52 GLY n 2 53 GLY n 2 54 VAL n 2 55 THR n 2 56 SER n 2 57 TYR n 2 58 ARG n 2 59 ASP n 2 60 SER n 2 61 VAL n 2 62 LYS n 2 63 GLY n 2 64 ARG n 2 65 PHE n 2 66 THR n 2 67 ILE n 2 68 SER n 2 69 ARG n 2 70 ASP n 2 71 ASN n 2 72 ALA n 2 73 LYS n 2 74 ASN n 2 75 THR n 2 76 LEU n 2 77 TYR n 2 78 LEU n 2 79 GLU n 2 80 MET n 2 81 THR n 2 82 SER n 2 83 LEU n 2 84 ASN n 2 85 PRO n 2 86 GLU n 2 87 ASP n 2 88 THR n 2 89 ALA n 2 90 VAL n 2 91 TYR n 2 92 ILE n 2 93 CYS n 2 94 ALA n 2 95 ASN n 2 96 ALA n 2 97 ARG n 2 98 ARG n 2 99 THR n 2 100 GLY n 2 101 PRO n 2 102 ARG n 2 103 ALA n 2 104 PRO n 2 105 THR n 2 106 ASP n 2 107 ILE n 2 108 GLY n 2 109 SER n 2 110 TYR n 2 111 ARG n 2 112 GLY n 2 113 GLN n 2 114 GLY n 2 115 THR n 2 116 LEU n 2 117 VAL n 2 118 THR n 2 119 VAL n 2 120 SER n 2 121 SER n 2 122 HIS n 2 123 HIS n 2 124 HIS n 2 125 HIS n 2 126 HIS n 2 127 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 355 human ? 'GPC3, OCI5' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 127 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 35 35 CYS CYS A . n A 1 2 HIS 2 36 36 HIS HIS A . n A 1 3 GLN 3 37 37 GLN GLN A . n A 1 4 VAL 4 38 38 VAL VAL A . n A 1 5 ARG 5 39 39 ARG ARG A . n A 1 6 GLY 6 59 59 GLY GLY A . n A 1 7 SER 7 60 60 SER SER A . n A 1 8 ASP 8 61 61 ASP ASP A . n A 1 9 LEU 9 62 62 LEU LEU A . n A 1 10 GLN 10 63 63 GLN GLN A . n A 1 11 VAL 11 64 64 VAL VAL A . n A 1 12 CYS 12 65 65 CYS CYS A . n A 1 13 LEU 13 66 66 LEU LEU A . n A 1 14 PRO 14 67 67 PRO PRO A . n A 1 15 LYS 15 68 68 LYS LYS A . n A 1 16 GLY 16 69 69 GLY GLY A . n A 1 17 PRO 17 70 70 PRO PRO A . n A 1 18 THR 18 71 71 THR THR A . n A 1 19 CYS 19 72 72 CYS CYS A . n A 1 20 CYS 20 73 73 CYS CYS A . n A 1 21 SER 21 74 74 SER SER A . n A 1 22 ARG 22 75 75 ARG ARG A . n A 1 23 LYS 23 76 76 LYS LYS A . n A 1 24 MET 24 77 77 MET MET A . n A 1 25 GLU 25 78 78 GLU GLU A . n A 1 26 GLU 26 79 79 GLU GLU A . n A 1 27 LYS 27 80 80 LYS LYS A . n A 1 28 TYR 28 81 81 TYR TYR A . n A 1 29 GLN 29 82 82 GLN GLN A . n A 1 30 LEU 30 83 83 LEU LEU A . n A 1 31 THR 31 84 84 THR THR A . n A 1 32 ALA 32 85 85 ALA ALA A . n A 1 33 ARG 33 86 86 ARG ARG A . n A 1 34 LEU 34 87 87 LEU LEU A . n A 1 35 ASN 35 88 88 ASN ASN A . n A 1 36 MET 36 89 89 MET MET A . n A 1 37 GLU 37 90 90 GLU GLU A . n A 1 38 GLN 38 91 91 GLN GLN A . n A 1 39 LEU 39 92 92 LEU LEU A . n A 1 40 LEU 40 93 93 LEU LEU A . n A 1 41 GLN 41 94 94 GLN GLN A . n A 1 42 SER 42 95 95 SER SER A . n A 1 43 ALA 43 96 96 ALA ALA A . n A 1 44 SER 44 97 97 SER SER A . n A 1 45 MET 45 98 98 MET MET A . n A 1 46 GLU 46 99 99 GLU GLU A . n A 1 47 LEU 47 100 100 LEU LEU A . n A 1 48 LYS 48 101 101 LYS LYS A . n A 1 49 PHE 49 102 102 PHE PHE A . n A 1 50 LEU 50 103 103 LEU LEU A . n A 1 51 ILE 51 104 104 ILE ILE A . n A 1 52 ILE 52 105 105 ILE ILE A . n A 1 53 GLN 53 106 106 GLN GLN A . n A 1 54 ASN 54 107 107 ASN ASN A . n A 1 55 ALA 55 108 108 ALA ALA A . n A 1 56 ALA 56 109 109 ALA ALA A . n A 1 57 VAL 57 110 110 VAL VAL A . n A 1 58 PHE 58 111 111 PHE PHE A . n A 1 59 GLN 59 112 112 GLN GLN A . n A 1 60 GLU 60 113 113 GLU GLU A . n A 1 61 ALA 61 114 114 ALA ALA A . n A 1 62 PHE 62 115 115 PHE PHE A . n A 1 63 GLU 63 116 116 GLU GLU A . n A 1 64 ILE 64 117 117 ILE ILE A . n A 1 65 VAL 65 118 118 VAL VAL A . n A 1 66 VAL 66 119 119 VAL VAL A . n A 1 67 ARG 67 120 120 ARG ARG A . n A 1 68 HIS 68 121 121 HIS HIS A . n A 1 69 ALA 69 122 122 ALA ALA A . n A 1 70 LYS 70 123 123 LYS LYS A . n A 1 71 ASN 71 124 124 ASN ASN A . n A 1 72 TYR 72 125 125 TYR TYR A . n A 1 73 THR 73 126 126 THR THR A . n A 1 74 ASN 74 127 127 ASN ASN A . n A 1 75 ALA 75 128 128 ALA ALA A . n A 1 76 MET 76 129 129 MET MET A . n A 1 77 PHE 77 130 130 PHE PHE A . n A 1 78 LYS 78 131 131 LYS LYS A . n A 1 79 ASN 79 132 132 ASN ASN A . n A 1 80 ASN 80 133 133 ASN ASN A . n A 1 81 TYR 81 134 134 TYR TYR A . n A 1 82 PRO 82 135 135 PRO PRO A . n A 1 83 SER 83 136 136 SER SER A . n A 1 84 LEU 84 137 137 LEU LEU A . n A 1 85 THR 85 138 138 THR THR A . n A 1 86 PRO 86 139 139 PRO PRO A . n A 1 87 GLN 87 140 140 GLN GLN A . n A 1 88 ALA 88 141 141 ALA ALA A . n A 1 89 PHE 89 142 142 PHE PHE A . n A 1 90 GLU 90 143 143 GLU GLU A . n A 1 91 PHE 91 144 144 PHE PHE A . n A 1 92 VAL 92 145 145 VAL VAL A . n A 1 93 GLY 93 146 146 GLY GLY A . n A 1 94 GLU 94 147 147 GLU GLU A . n A 1 95 PHE 95 148 148 PHE PHE A . n A 1 96 PHE 96 149 149 PHE PHE A . n A 1 97 THR 97 150 150 THR THR A . n A 1 98 ASP 98 151 151 ASP ASP A . n A 1 99 VAL 99 152 152 VAL VAL A . n A 1 100 SER 100 153 153 SER SER A . n A 1 101 LEU 101 154 154 LEU LEU A . n A 1 102 TYR 102 155 155 TYR TYR A . n A 1 103 ILE 103 156 156 ILE ILE A . n A 1 104 LEU 104 157 157 LEU LEU A . n A 1 105 GLY 105 158 158 GLY GLY A . n A 1 106 SER 106 159 159 SER SER A . n A 1 107 ASP 107 160 160 ASP ASP A . n A 1 108 ILE 108 161 161 ILE ILE A . n A 1 109 ASN 109 162 162 ASN ASN A . n A 1 110 VAL 110 163 163 VAL VAL A . n A 1 111 ASP 111 164 164 ASP ASP A . n A 1 112 ASP 112 165 165 ASP ASP A . n A 1 113 MET 113 166 166 MET MET A . n A 1 114 VAL 114 167 167 VAL VAL A . n A 1 115 ASN 115 168 168 ASN ASN A . n A 1 116 GLU 116 169 169 GLU GLU A . n A 1 117 LEU 117 170 170 LEU LEU A . n A 1 118 PHE 118 171 171 PHE PHE A . n A 1 119 ASP 119 172 172 ASP ASP A . n A 1 120 SER 120 173 173 SER SER A . n A 1 121 LEU 121 174 174 LEU LEU A . n A 1 122 PHE 122 175 175 PHE PHE A . n A 1 123 PRO 123 176 176 PRO PRO A . n A 1 124 VAL 124 177 177 VAL VAL A . n A 1 125 ILE 125 178 178 ILE ILE A . n A 1 126 TYR 126 179 179 TYR TYR A . n A 1 127 THR 127 180 180 THR THR A . n A 1 128 GLN 128 181 181 GLN GLN A . n A 1 129 LEU 129 182 182 LEU LEU A . n A 1 130 MET 130 183 183 MET MET A . n A 1 131 ASN 131 184 184 ASN ASN A . n A 1 132 PRO 132 185 185 PRO PRO A . n A 1 133 GLY 133 186 186 GLY GLY A . n A 1 134 LEU 134 192 192 LEU LEU A . n A 1 135 ASP 135 193 193 ASP ASP A . n A 1 136 ILE 136 194 194 ILE ILE A . n A 1 137 ASN 137 195 195 ASN ASN A . n A 1 138 GLU 138 196 196 GLU GLU A . n A 1 139 CYS 139 197 197 CYS CYS A . n A 1 140 LEU 140 198 198 LEU LEU A . n A 1 141 ARG 141 199 199 ARG ARG A . n A 1 142 GLY 142 200 200 GLY GLY A . n A 1 143 ALA 143 201 201 ALA ALA A . n A 1 144 ARG 144 202 202 ARG ARG A . n A 1 145 ARG 145 203 203 ARG ARG A . n A 1 146 ASP 146 204 204 ASP ASP A . n A 1 147 LEU 147 205 205 LEU LEU A . n A 1 148 LYS 148 206 206 LYS LYS A . n A 1 149 VAL 149 207 207 VAL VAL A . n A 1 150 PHE 150 208 208 PHE PHE A . n A 1 151 GLY 151 209 209 GLY GLY A . n A 1 152 PHE 152 211 211 PHE PHE A . n A 1 153 PRO 153 212 212 PRO PRO A . n A 1 154 LYS 154 213 213 LYS LYS A . n A 1 155 LEU 155 214 214 LEU LEU A . n A 1 156 ILE 156 215 215 ILE ILE A . n A 1 157 MET 157 216 216 MET MET A . n A 1 158 THR 158 217 217 THR THR A . n A 1 159 GLN 159 218 218 GLN GLN A . n A 1 160 VAL 160 219 219 VAL VAL A . n A 1 161 SER 161 220 220 SER SER A . n A 1 162 LYS 162 221 221 LYS LYS A . n A 1 163 SER 163 222 222 SER SER A . n A 1 164 LEU 164 223 223 LEU LEU A . n A 1 165 GLN 165 224 224 GLN GLN A . n A 1 166 VAL 166 225 225 VAL VAL A . n A 1 167 THR 167 226 226 THR THR A . n A 1 168 ILE 168 228 228 ILE ILE A . n A 1 169 PHE 169 229 229 PHE PHE A . n A 1 170 LEU 170 230 230 LEU LEU A . n A 1 171 GLN 171 231 231 GLN GLN A . n A 1 172 ALA 172 232 232 ALA ALA A . n A 1 173 LEU 173 233 233 LEU LEU A . n A 1 174 ASN 174 234 234 ASN ASN A . n A 1 175 LEU 175 235 235 LEU LEU A . n A 1 176 GLY 176 236 236 GLY GLY A . n A 1 177 ILE 177 237 237 ILE ILE A . n A 1 178 GLU 178 238 238 GLU GLU A . n A 1 179 VAL 179 239 239 VAL VAL A . n A 1 180 ASN 180 241 241 ASN ASN A . n A 1 181 THR 181 242 242 THR THR A . n A 1 182 THR 182 243 243 THR THR A . n A 1 183 ASP 183 244 244 ASP ASP A . n A 1 184 HIS 184 245 245 HIS HIS A . n A 1 185 LEU 185 246 246 LEU LEU A . n A 1 186 LYS 186 247 247 LYS LYS A . n A 1 187 SER 187 249 249 SER SER A . n A 1 188 LYS 188 250 250 LYS LYS A . n A 1 189 ASP 189 251 251 ASP ASP A . n A 1 190 CYS 190 252 252 CYS CYS A . n A 1 191 GLY 191 253 253 GLY GLY A . n A 1 192 ARG 192 254 254 ARG ARG A . n A 1 193 MET 193 255 255 MET MET A . n A 1 194 LEU 194 256 256 LEU LEU A . n A 1 195 THR 195 257 257 THR THR A . n A 1 196 ARG 196 258 258 ARG ARG A . n A 1 197 MET 197 259 259 MET MET A . n A 1 198 TRP 198 260 260 TRP TRP A . n A 1 199 TYR 199 261 261 TYR TYR A . n A 1 200 CYS 200 262 262 CYS CYS A . n A 1 201 SER 201 263 263 SER SER A . n A 1 202 TYR 202 264 264 TYR TYR A . n A 1 203 CYS 203 265 265 CYS CYS A . n A 1 204 GLN 204 266 266 GLN GLN A . n A 1 205 GLY 205 267 267 GLY GLY A . n A 1 206 LEU 206 268 268 LEU LEU A . n A 1 207 MET 207 269 269 MET MET A . n A 1 208 MET 208 270 270 MET MET A . n A 1 209 VAL 209 271 271 VAL VAL A . n A 1 210 LYS 210 272 272 LYS LYS A . n A 1 211 PRO 211 273 273 PRO PRO A . n A 1 212 CYS 212 274 274 CYS CYS A . n A 1 213 GLY 213 275 275 GLY GLY A . n A 1 214 GLY 214 276 276 GLY GLY A . n A 1 215 TYR 215 277 277 TYR TYR A . n A 1 216 CYS 216 278 278 CYS CYS A . n A 1 217 ASN 217 279 279 ASN ASN A . n A 1 218 VAL 218 280 280 VAL VAL A . n A 1 219 VAL 219 281 281 VAL VAL A . n A 1 220 MET 220 282 282 MET MET A . n A 1 221 GLN 221 283 283 GLN GLN A . n A 1 222 GLY 222 284 284 GLY GLY A . n A 1 223 CYS 223 285 285 CYS CYS A . n A 1 224 MET 224 286 286 MET MET A . n A 1 225 ALA 225 287 287 ALA ALA A . n A 1 226 GLY 226 288 288 GLY GLY A . n A 1 227 VAL 227 289 289 VAL VAL A . n A 1 228 VAL 228 290 290 VAL VAL A . n A 1 229 GLU 229 291 291 GLU GLU A . n A 1 230 ILE 230 292 292 ILE ILE A . n A 1 231 ASP 231 293 293 ASP ASP A . n A 1 232 LYS 232 294 294 LYS LYS A . n A 1 233 TYR 233 295 295 TYR TYR A . n A 1 234 TRP 234 296 296 TRP TRP A . n A 1 235 ARG 235 297 297 ARG ARG A . n A 1 236 GLU 236 298 298 GLU GLU A . n A 1 237 TYR 237 299 299 TYR TYR A . n A 1 238 ILE 238 300 300 ILE ILE A . n A 1 239 LEU 239 301 301 LEU LEU A . n A 1 240 SER 240 302 302 SER SER A . n A 1 241 LEU 241 303 303 LEU LEU A . n A 1 242 GLU 242 304 304 GLU GLU A . n A 1 243 GLU 243 305 305 GLU GLU A . n A 1 244 LEU 244 306 306 LEU LEU A . n A 1 245 VAL 245 307 307 VAL VAL A . n A 1 246 ASN 246 308 308 ASN ASN A . n A 1 247 GLY 247 309 309 GLY GLY A . n A 1 248 MET 248 310 310 MET MET A . n A 1 249 ASP 249 315 315 ASP ASP A . n A 1 250 MET 250 316 316 MET MET A . n A 1 251 GLU 251 317 317 GLU GLU A . n A 1 252 ASN 252 318 318 ASN ASN A . n A 1 253 VAL 253 319 319 VAL VAL A . n A 1 254 LEU 254 320 320 LEU LEU A . n A 1 255 LEU 255 321 321 LEU LEU A . n A 1 256 GLY 256 322 322 GLY GLY A . n A 1 257 LEU 257 323 323 LEU LEU A . n A 1 258 PHE 258 324 324 PHE PHE A . n A 1 259 SER 259 325 325 SER SER A . n A 1 260 THR 260 326 326 THR THR A . n A 1 261 ILE 261 327 327 ILE ILE A . n A 1 262 HIS 262 328 328 HIS HIS A . n A 1 263 ASP 263 329 329 ASP ASP A . n A 1 264 SER 264 330 330 SER SER A . n A 1 265 ILE 265 331 331 ILE ILE A . n A 1 266 GLN 266 332 332 GLN GLN A . n A 1 267 TYR 267 333 333 TYR TYR A . n A 1 268 VAL 268 334 334 VAL VAL A . n A 1 269 GLN 269 335 335 GLN GLN A . n A 1 270 LYS 270 336 336 LYS LYS A . n A 1 271 ASN 271 337 337 ASN ASN A . n A 1 272 ALA 272 338 338 ALA ALA A . n A 1 273 GLY 273 339 339 GLY GLY A . n A 1 274 LYS 274 340 340 LYS LYS A . n A 1 275 LEU 275 341 341 LEU LEU A . n A 1 276 THR 276 342 342 THR THR A . n A 1 277 THR 277 343 343 THR THR A . n A 1 278 THR 278 344 344 THR THR A . n A 1 279 ILE 279 345 345 ILE ILE A . n A 1 280 GLY 280 346 346 GLY GLY A . n A 1 281 LYS 281 347 347 LYS LYS A . n A 1 282 LEU 282 348 348 LEU LEU A . n A 1 283 CYS 283 349 349 CYS CYS A . n A 1 284 THR 284 383 383 THR THR A . n A 1 285 LEU 285 384 384 LEU LEU A . n A 1 286 SER 286 385 385 SER SER A . n A 1 287 SER 287 386 386 SER SER A . n A 1 288 ARG 288 387 387 ARG ARG A . n A 1 289 ARG 289 388 388 ARG ARG A . n A 1 290 ARG 290 389 389 ARG ARG A . n A 1 291 GLU 291 390 390 GLU GLU A . n A 1 292 LEU 292 391 391 LEU LEU A . n A 1 293 ILE 293 392 392 ILE ILE A . n A 1 294 GLN 294 393 393 GLN GLN A . n A 1 295 LYS 295 394 394 LYS LYS A . n A 1 296 LEU 296 395 395 LEU LEU A . n A 1 297 LYS 297 396 396 LYS LYS A . n A 1 298 SER 298 397 397 SER SER A . n A 1 299 PHE 299 398 398 PHE PHE A . n A 1 300 ILE 300 399 399 ILE ILE A . n A 1 301 SER 301 400 400 SER SER A . n A 1 302 PHE 302 401 401 PHE PHE A . n A 1 303 TYR 303 402 402 TYR TYR A . n A 1 304 SER 304 403 403 SER SER A . n A 1 305 ALA 305 404 404 ALA ALA A . n A 1 306 LEU 306 405 405 LEU LEU A . n A 1 307 PRO 307 406 406 PRO PRO A . n A 1 308 GLY 308 407 407 GLY GLY A . n A 1 309 TYR 309 408 408 TYR TYR A . n A 1 310 ILE 310 409 409 ILE ILE A . n A 1 311 CYS 311 410 410 CYS CYS A . n A 1 312 SER 312 411 411 SER SER A . n A 1 313 HIS 313 412 412 HIS HIS A . n A 1 314 SER 314 413 413 SER SER A . n A 1 315 PRO 315 414 414 PRO PRO A . n A 1 316 VAL 316 415 415 VAL VAL A . n A 1 317 ALA 317 416 416 ALA ALA A . n A 1 318 GLU 318 417 417 GLU GLU A . n A 1 319 ASN 319 418 418 ASN ASN A . n A 1 320 ASP 320 419 419 ASP ASP A . n A 1 321 THR 321 420 420 THR THR A . n A 1 322 LEU 322 421 421 LEU LEU A . n A 1 323 CYS 323 422 422 CYS CYS A . n A 1 324 TRP 324 423 423 TRP TRP A . n A 1 325 ASN 325 424 424 ASN ASN A . n A 1 326 GLY 326 425 425 GLY GLY A . n A 1 327 GLN 327 426 426 GLN GLN A . n A 1 328 GLU 328 427 427 GLU GLU A . n A 1 329 LEU 329 428 428 LEU LEU A . n A 1 330 VAL 330 429 429 VAL VAL A . n A 1 331 GLU 331 430 430 GLU GLU A . n A 1 332 ARG 332 431 431 ARG ARG A . n A 1 333 TYR 333 432 432 TYR TYR A . n A 1 334 SER 334 433 433 SER SER A . n A 1 335 GLN 335 434 434 GLN GLN A . n A 1 336 PRO 336 457 457 PRO PRO A . n A 1 337 VAL 337 458 458 VAL VAL A . n A 1 338 VAL 338 459 459 VAL VAL A . n A 1 339 SER 339 460 460 SER SER A . n A 1 340 GLN 340 461 461 GLN GLN A . n A 1 341 ILE 341 462 462 ILE ILE A . n A 1 342 ILE 342 463 463 ILE ILE A . n A 1 343 ASP 343 464 464 ASP ASP A . n A 1 344 LYS 344 465 465 LYS LYS A . n A 1 345 LEU 345 466 466 LEU LEU A . n A 1 346 HIS 346 468 468 HIS HIS A . n A 1 347 ILE 347 469 469 ILE ILE A . n A 1 348 ASN 348 470 470 ASN ASN A . n A 1 349 GLN 349 471 471 GLN GLN A . n A 1 350 LEU 350 472 472 LEU LEU A . n A 1 351 LEU 351 473 473 LEU LEU A . n A 1 352 ARG 352 474 474 ARG ARG A . n A 1 353 THR 353 475 475 THR THR A . n A 1 354 MET 354 476 476 MET MET A . n A 1 355 SER 355 477 477 SER SER A . n B 2 1 GLU 1 1 1 GLU GLU B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 GLU 6 6 6 GLU GLU B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 GLY 9 9 9 GLY GLY B . n B 2 10 GLY 10 11 11 GLY GLY B . n B 2 11 LEU 11 12 12 LEU LEU B . n B 2 12 VAL 12 13 13 VAL VAL B . n B 2 13 GLN 13 14 14 GLN GLN B . n B 2 14 PRO 14 15 15 PRO PRO B . n B 2 15 GLY 15 16 16 GLY GLY B . n B 2 16 LEU 16 19 19 LEU LEU B . n B 2 17 ARG 17 20 20 ARG ARG B . n B 2 18 LEU 18 21 21 LEU LEU B . n B 2 19 SER 19 22 22 SER SER B . n B 2 20 CYS 20 23 23 CYS CYS B . n B 2 21 VAL 21 24 24 VAL VAL B . n B 2 22 ALA 22 25 25 ALA ALA B . n B 2 23 SER 23 26 26 SER SER B . n B 2 24 GLY 24 27 27 GLY GLY B . n B 2 25 PHE 25 28 28 PHE PHE B . n B 2 26 THR 26 29 29 THR THR B . n B 2 27 PHE 27 30 30 PHE PHE B . n B 2 28 SER 28 35 35 SER SER B . n B 2 29 SER 29 36 36 SER SER B . n B 2 30 PHE 30 37 37 PHE PHE B . n B 2 31 ALA 31 38 38 ALA ALA B . n B 2 32 MET 32 39 39 MET MET B . n B 2 33 THR 33 40 40 THR THR B . n B 2 34 TRP 34 41 41 TRP TRP B . n B 2 35 VAL 35 42 42 VAL VAL B . n B 2 36 ARG 36 43 43 ARG ARG B . n B 2 37 ARG 37 44 44 ARG ARG B . n B 2 38 PRO 38 45 45 PRO PRO B . n B 2 39 PRO 39 46 46 PRO PRO B . n B 2 40 GLY 40 47 47 GLY GLY B . n B 2 41 LYS 41 48 48 LYS LYS B . n B 2 42 GLY 42 49 49 GLY GLY B . n B 2 43 LEU 43 50 50 LEU LEU B . n B 2 44 GLU 44 51 51 GLU GLU B . n B 2 45 TRP 45 52 52 TRP TRP B . n B 2 46 VAL 46 53 53 VAL VAL B . n B 2 47 ALA 47 54 54 ALA ALA B . n B 2 48 THR 48 55 55 THR THR B . n B 2 49 ILE 49 56 56 ILE ILE B . n B 2 50 THR 50 57 57 THR THR B . n B 2 51 ASN 51 58 58 ASN ASN B . n B 2 52 GLY 52 59 59 GLY GLY B . n B 2 53 GLY 53 63 63 GLY GLY B . n B 2 54 VAL 54 64 64 VAL VAL B . n B 2 55 THR 55 65 65 THR THR B . n B 2 56 SER 56 66 66 SER SER B . n B 2 57 TYR 57 67 67 TYR TYR B . n B 2 58 ARG 58 68 68 ARG ARG B . n B 2 59 ASP 59 69 69 ASP ASP B . n B 2 60 SER 60 70 70 SER SER B . n B 2 61 VAL 61 71 71 VAL VAL B . n B 2 62 LYS 62 72 72 LYS LYS B . n B 2 63 GLY 63 74 74 GLY GLY B . n B 2 64 ARG 64 75 75 ARG ARG B . n B 2 65 PHE 65 76 76 PHE PHE B . n B 2 66 THR 66 77 77 THR THR B . n B 2 67 ILE 67 78 78 ILE ILE B . n B 2 68 SER 68 79 79 SER SER B . n B 2 69 ARG 69 80 80 ARG ARG B . n B 2 70 ASP 70 81 81 ASP ASP B . n B 2 71 ASN 71 82 82 ASN ASN B . n B 2 72 ALA 72 83 83 ALA ALA B . n B 2 73 LYS 73 84 84 LYS LYS B . n B 2 74 ASN 74 85 85 ASN ASN B . n B 2 75 THR 75 86 86 THR THR B . n B 2 76 LEU 76 87 87 LEU LEU B . n B 2 77 TYR 77 88 88 TYR TYR B . n B 2 78 LEU 78 89 89 LEU LEU B . n B 2 79 GLU 79 90 90 GLU GLU B . n B 2 80 MET 80 91 91 MET MET B . n B 2 81 THR 81 92 92 THR THR B . n B 2 82 SER 82 93 93 SER SER B . n B 2 83 LEU 83 94 94 LEU LEU B . n B 2 84 ASN 84 95 95 ASN ASN B . n B 2 85 PRO 85 96 96 PRO PRO B . n B 2 86 GLU 86 97 97 GLU GLU B . n B 2 87 ASP 87 98 98 ASP ASP B . n B 2 88 THR 88 99 99 THR THR B . n B 2 89 ALA 89 100 100 ALA ALA B . n B 2 90 VAL 90 101 101 VAL VAL B . n B 2 91 TYR 91 102 102 TYR TYR B . n B 2 92 ILE 92 103 103 ILE ILE B . n B 2 93 CYS 93 104 104 CYS CYS B . n B 2 94 ALA 94 105 105 ALA ALA B . n B 2 95 ASN 95 106 106 ASN ASN B . n B 2 96 ALA 96 107 107 ALA ALA B . n B 2 97 ARG 97 108 108 ARG ARG B . n B 2 98 ARG 98 109 109 ARG ARG B . n B 2 99 THR 99 110 110 THR THR B . n B 2 100 GLY 100 111 111 GLY GLY B . n B 2 101 PRO 101 111 111 PRO PRO B A n B 2 102 ARG 102 111 111 ARG ARG B B n B 2 103 ALA 103 112 112 ALA ALA B B n B 2 104 PRO 104 112 112 PRO PRO B A n B 2 105 THR 105 112 112 THR THR B . n B 2 106 ASP 106 113 113 ASP ASP B . n B 2 107 ILE 107 114 114 ILE ILE B . n B 2 108 GLY 108 115 115 GLY GLY B . n B 2 109 SER 109 116 116 SER SER B . n B 2 110 TYR 110 117 117 TYR TYR B . n B 2 111 ARG 111 118 118 ARG ARG B . n B 2 112 GLY 112 119 119 GLY GLY B . n B 2 113 GLN 113 120 120 GLN GLN B . n B 2 114 GLY 114 121 121 GLY GLY B . n B 2 115 THR 115 122 122 THR THR B . n B 2 116 LEU 116 123 123 LEU LEU B . n B 2 117 VAL 117 124 124 VAL VAL B . n B 2 118 THR 118 125 125 THR THR B . n B 2 119 VAL 119 126 126 VAL VAL B . n B 2 120 SER 120 127 127 SER SER B . n B 2 121 SER 121 128 128 SER SER B . n B 2 122 HIS 122 129 ? ? ? B . n B 2 123 HIS 123 130 ? ? ? B . n B 2 124 HIS 124 131 ? ? ? B . n B 2 125 HIS 125 132 ? ? ? B . n B 2 126 HIS 126 133 ? ? ? B . n B 2 127 HIS 127 134 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 501 501 NAG NAG A . D 3 NAG 1 502 502 NAG NAG A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 39 ? CG ? A ARG 5 CG 2 1 Y 1 A ARG 39 ? CD ? A ARG 5 CD 3 1 Y 1 A ARG 39 ? NE ? A ARG 5 NE 4 1 Y 1 A ARG 39 ? CZ ? A ARG 5 CZ 5 1 Y 1 A ARG 39 ? NH1 ? A ARG 5 NH1 6 1 Y 1 A ARG 39 ? NH2 ? A ARG 5 NH2 7 1 Y 1 A LYS 80 ? CG ? A LYS 27 CG 8 1 Y 1 A LYS 80 ? CD ? A LYS 27 CD 9 1 Y 1 A LYS 80 ? CE ? A LYS 27 CE 10 1 Y 1 A LYS 80 ? NZ ? A LYS 27 NZ 11 1 Y 1 A LEU 192 ? CG ? A LEU 134 CG 12 1 Y 1 A LEU 192 ? CD1 ? A LEU 134 CD1 13 1 Y 1 A LEU 192 ? CD2 ? A LEU 134 CD2 14 1 Y 1 A ASP 193 ? CG ? A ASP 135 CG 15 1 Y 1 A ASP 193 ? OD1 ? A ASP 135 OD1 16 1 Y 1 A ASP 193 ? OD2 ? A ASP 135 OD2 17 1 Y 1 A LYS 221 ? CG ? A LYS 162 CG 18 1 Y 1 A LYS 221 ? CD ? A LYS 162 CD 19 1 Y 1 A LYS 221 ? CE ? A LYS 162 CE 20 1 Y 1 A LYS 221 ? NZ ? A LYS 162 NZ 21 1 Y 1 A LYS 247 ? CG ? A LYS 186 CG 22 1 Y 1 A LYS 247 ? CD ? A LYS 186 CD 23 1 Y 1 A LYS 247 ? CE ? A LYS 186 CE 24 1 Y 1 A LYS 247 ? NZ ? A LYS 186 NZ 25 1 Y 1 A LYS 336 ? CG ? A LYS 270 CG 26 1 Y 1 A LYS 336 ? CD ? A LYS 270 CD 27 1 Y 1 A LYS 336 ? CE ? A LYS 270 CE 28 1 Y 1 A LYS 336 ? NZ ? A LYS 270 NZ 29 1 Y 1 A LYS 347 ? CG ? A LYS 281 CG 30 1 Y 1 A LYS 347 ? CD ? A LYS 281 CD 31 1 Y 1 A LYS 347 ? CE ? A LYS 281 CE 32 1 Y 1 A LYS 347 ? NZ ? A LYS 281 NZ 33 1 Y 1 A ARG 389 ? CG ? A ARG 290 CG 34 1 Y 1 A ARG 389 ? CD ? A ARG 290 CD 35 1 Y 1 A ARG 389 ? NE ? A ARG 290 NE 36 1 Y 1 A ARG 389 ? CZ ? A ARG 290 CZ 37 1 Y 1 A ARG 389 ? NH1 ? A ARG 290 NH1 38 1 Y 1 A ARG 389 ? NH2 ? A ARG 290 NH2 39 1 Y 1 A ARG 431 ? CG ? A ARG 332 CG 40 1 Y 1 A ARG 431 ? CD ? A ARG 332 CD 41 1 Y 1 A ARG 431 ? NE ? A ARG 332 NE 42 1 Y 1 A ARG 431 ? CZ ? A ARG 332 CZ 43 1 Y 1 A ARG 431 ? NH1 ? A ARG 332 NH1 44 1 Y 1 A ARG 431 ? NH2 ? A ARG 332 NH2 45 1 N 1 A NAG 501 ? O1 ? C NAG 1 O1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9NTT _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9NTT _struct.title ;Identification and non-clinical characterization of SAR444200, a novel anti-GPC3 T-cell engager for the treatment of GPC3+ solid tumors ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9NTT _struct_keywords.text 'Oncoprotein, therapeutic, T-cell engager, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP GPC3_HUMAN P51654 ? 1 ;VPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPS LTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLPDSALDINECLRGARRDLKVFGNFPKLIM TQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYW REYILSLEELVNGMYRIYDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCAHSQQRQYRSAYYPEDLFIDKKVLKVA HVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQKAARNGMKNQFNLHELKMKGPE PVVSQIIDKLKHINQLLRTMS ; 57 2 PDB 9NTT 9NTT ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9NTT A 4 ? 355 ? P51654 57 ? 477 ? 38 477 2 2 9NTT B 1 ? 127 ? 9NTT 1 ? 134 ? 1 134 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9NTT CYS A 1 ? UNP P51654 ? ? 'expression tag' 35 1 1 9NTT HIS A 2 ? UNP P51654 ? ? 'expression tag' 36 2 1 9NTT GLN A 3 ? UNP P51654 ? ? 'expression tag' 37 3 1 9NTT ARG A 5 ? UNP P51654 PRO 58 conflict 39 4 1 9NTT ? A ? ? UNP P51654 LEU 187 deletion ? 5 1 9NTT ? A ? ? UNP P51654 PRO 188 deletion ? 6 1 9NTT ? A ? ? UNP P51654 ASP 189 deletion ? 7 1 9NTT ? A ? ? UNP P51654 SER 190 deletion ? 8 1 9NTT ? A ? ? UNP P51654 ALA 191 deletion ? 9 1 9NTT ? A ? ? UNP P51654 ASN 210 deletion ? 10 1 9NTT ? A ? ? UNP P51654 ARG 227 deletion ? 11 1 9NTT ? A ? ? UNP P51654 ILE 240 deletion ? 12 1 9NTT ? A ? ? UNP P51654 PHE 248 deletion ? 13 1 9NTT ? A ? ? UNP P51654 TYR 311 deletion ? 14 1 9NTT ? A ? ? UNP P51654 ARG 312 deletion ? 15 1 9NTT ? A ? ? UNP P51654 ILE 313 deletion ? 16 1 9NTT ? A ? ? UNP P51654 TYR 314 deletion ? 17 1 9NTT ? A ? ? UNP P51654 ALA 350 deletion ? 18 1 9NTT ? A ? ? UNP P51654 HIS 351 deletion ? 19 1 9NTT ? A ? ? UNP P51654 SER 352 deletion ? 20 1 9NTT ? A ? ? UNP P51654 GLN 353 deletion ? 21 1 9NTT ? A ? ? UNP P51654 GLN 354 deletion ? 22 1 9NTT ? A ? ? UNP P51654 ARG 355 deletion ? 23 1 9NTT ? A ? ? UNP P51654 GLN 356 deletion ? 24 1 9NTT ? A ? ? UNP P51654 TYR 357 deletion ? 25 1 9NTT ? A ? ? UNP P51654 ARG 358 deletion ? 26 1 9NTT ? A ? ? UNP P51654 SER 359 deletion ? 27 1 9NTT ? A ? ? UNP P51654 ALA 360 deletion ? 28 1 9NTT ? A ? ? UNP P51654 TYR 361 deletion ? 29 1 9NTT ? A ? ? UNP P51654 TYR 362 deletion ? 30 1 9NTT ? A ? ? UNP P51654 PRO 363 deletion ? 31 1 9NTT ? A ? ? UNP P51654 GLU 364 deletion ? 32 1 9NTT ? A ? ? UNP P51654 ASP 365 deletion ? 33 1 9NTT ? A ? ? UNP P51654 LEU 366 deletion ? 34 1 9NTT ? A ? ? UNP P51654 PHE 367 deletion ? 35 1 9NTT ? A ? ? UNP P51654 ILE 368 deletion ? 36 1 9NTT ? A ? ? UNP P51654 ASP 369 deletion ? 37 1 9NTT ? A ? ? UNP P51654 LYS 370 deletion ? 38 1 9NTT ? A ? ? UNP P51654 LYS 371 deletion ? 39 1 9NTT ? A ? ? UNP P51654 VAL 372 deletion ? 40 1 9NTT ? A ? ? UNP P51654 LEU 373 deletion ? 41 1 9NTT ? A ? ? UNP P51654 LYS 374 deletion ? 42 1 9NTT ? A ? ? UNP P51654 VAL 375 deletion ? 43 1 9NTT ? A ? ? UNP P51654 ALA 376 deletion ? 44 1 9NTT ? A ? ? UNP P51654 HIS 377 deletion ? 45 1 9NTT ? A ? ? UNP P51654 VAL 378 deletion ? 46 1 9NTT ? A ? ? UNP P51654 GLU 379 deletion ? 47 1 9NTT ? A ? ? UNP P51654 HIS 380 deletion ? 48 1 9NTT ? A ? ? UNP P51654 GLU 381 deletion ? 49 1 9NTT ? A ? ? UNP P51654 GLU 382 deletion ? 50 1 9NTT ? A ? ? UNP P51654 LYS 435 deletion ? 51 1 9NTT ? A ? ? UNP P51654 ALA 436 deletion ? 52 1 9NTT ? A ? ? UNP P51654 ALA 437 deletion ? 53 1 9NTT ? A ? ? UNP P51654 ARG 438 deletion ? 54 1 9NTT ? A ? ? UNP P51654 ASN 439 deletion ? 55 1 9NTT ? A ? ? UNP P51654 GLY 440 deletion ? 56 1 9NTT ? A ? ? UNP P51654 MET 441 deletion ? 57 1 9NTT ? A ? ? UNP P51654 LYS 442 deletion ? 58 1 9NTT ? A ? ? UNP P51654 ASN 443 deletion ? 59 1 9NTT ? A ? ? UNP P51654 GLN 444 deletion ? 60 1 9NTT ? A ? ? UNP P51654 PHE 445 deletion ? 61 1 9NTT ? A ? ? UNP P51654 ASN 446 deletion ? 62 1 9NTT ? A ? ? UNP P51654 LEU 447 deletion ? 63 1 9NTT ? A ? ? UNP P51654 HIS 448 deletion ? 64 1 9NTT ? A ? ? UNP P51654 GLU 449 deletion ? 65 1 9NTT ? A ? ? UNP P51654 LEU 450 deletion ? 66 1 9NTT ? A ? ? UNP P51654 LYS 451 deletion ? 67 1 9NTT ? A ? ? UNP P51654 MET 452 deletion ? 68 1 9NTT ? A ? ? UNP P51654 LYS 453 deletion ? 69 1 9NTT ? A ? ? UNP P51654 GLY 454 deletion ? 70 1 9NTT ? A ? ? UNP P51654 PRO 455 deletion ? 71 1 9NTT ? A ? ? UNP P51654 GLU 456 deletion ? 72 1 9NTT ? A ? ? UNP P51654 LYS 467 deletion ? 73 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 21 ? ALA A 61 ? SER A 74 ALA A 114 1 ? 41 HELX_P HELX_P2 AA2 GLU A 63 ? TYR A 81 ? GLU A 116 TYR A 134 1 ? 19 HELX_P HELX_P3 AA3 PRO A 82 ? THR A 85 ? PRO A 135 THR A 138 5 ? 4 HELX_P HELX_P4 AA4 PRO A 86 ? LEU A 104 ? PRO A 139 LEU A 157 1 ? 19 HELX_P HELX_P5 AA5 ASN A 109 ? LEU A 129 ? ASN A 162 LEU A 182 1 ? 21 HELX_P HELX_P6 AA6 ILE A 136 ? LEU A 147 ? ILE A 194 LEU A 205 1 ? 12 HELX_P HELX_P7 AA7 PRO A 153 ? THR A 167 ? PRO A 212 THR A 226 1 ? 15 HELX_P HELX_P8 AA8 PHE A 169 ? VAL A 179 ? PHE A 229 VAL A 239 1 ? 11 HELX_P HELX_P9 AA9 ASN A 180 ? LEU A 185 ? ASN A 241 LEU A 246 5 ? 6 HELX_P HELX_P10 AB1 LYS A 188 ? TYR A 199 ? LYS A 250 TYR A 261 1 ? 12 HELX_P HELX_P11 AB2 TYR A 199 ? GLN A 204 ? TYR A 261 GLN A 266 1 ? 6 HELX_P HELX_P12 AB3 CYS A 212 ? MET A 224 ? CYS A 274 MET A 286 1 ? 13 HELX_P HELX_P13 AB4 MET A 224 ? GLU A 229 ? MET A 286 GLU A 291 1 ? 6 HELX_P HELX_P14 AB5 GLU A 229 ? MET A 248 ? GLU A 291 MET A 310 1 ? 20 HELX_P HELX_P15 AB6 MET A 250 ? GLY A 256 ? MET A 316 GLY A 322 1 ? 7 HELX_P HELX_P16 AB7 GLY A 256 ? LYS A 270 ? GLY A 322 LYS A 336 1 ? 15 HELX_P HELX_P17 AB8 ASN A 271 ? CYS A 283 ? ASN A 337 CYS A 349 1 ? 13 HELX_P HELX_P18 AB9 LEU A 285 ? SER A 298 ? LEU A 384 SER A 397 1 ? 14 HELX_P HELX_P19 AC1 ALA A 305 ? HIS A 313 ? ALA A 404 HIS A 412 1 ? 9 HELX_P HELX_P20 AC2 VAL A 337 ? LEU A 345 ? VAL A 458 LEU A 466 1 ? 9 HELX_P HELX_P21 AC3 ILE A 347 ? THR A 353 ? ILE A 469 THR A 475 1 ? 7 HELX_P HELX_P22 AC4 ASP B 59 ? LYS B 62 ? ASP B 69 LYS B 72 5 ? 4 HELX_P HELX_P23 AC5 ASN B 84 ? THR B 88 ? ASN B 95 THR B 99 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 19 SG ? ? A CYS 35 A CYS 72 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 12 SG ? ? ? 1_555 A CYS 200 SG ? ? A CYS 65 A CYS 262 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 203 SG ? ? A CYS 73 A CYS 265 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 283 SG ? ? A CYS 197 A CYS 349 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? A CYS 190 SG ? ? ? 1_555 A CYS 223 SG ? ? A CYS 252 A CYS 285 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf6 disulf ? ? A CYS 212 SG ? ? ? 1_555 A CYS 323 SG ? ? A CYS 274 A CYS 422 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf7 disulf ? ? A CYS 216 SG ? ? ? 1_555 A CYS 311 SG ? ? A CYS 278 A CYS 410 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf8 disulf ? ? B CYS 20 SG ? ? ? 1_555 B CYS 93 SG ? ? B CYS 23 B CYS 104 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 71 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 124 A NAG 502 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN A 71 ? NAG A 502 ? 1_555 ASN A 124 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 1 ? CYS A 19 ? CYS A 35 ? 1_555 CYS A 72 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 12 ? CYS A 200 ? CYS A 65 ? 1_555 CYS A 262 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 20 ? CYS A 203 ? CYS A 73 ? 1_555 CYS A 265 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 139 ? CYS A 283 ? CYS A 197 ? 1_555 CYS A 349 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 190 ? CYS A 223 ? CYS A 252 ? 1_555 CYS A 285 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 212 ? CYS A 323 ? CYS A 274 ? 1_555 CYS A 422 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS A 216 ? CYS A 311 ? CYS A 278 ? 1_555 CYS A 410 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS B 20 ? CYS B 93 ? CYS B 23 ? 1_555 CYS B 104 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 85 A . ? THR 138 A PRO 86 A ? PRO 139 A 1 4.72 2 THR 99 B . ? THR 110 B GLY 100 B ? GLY 111 B 1 -11.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? AA3 ? 6 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 321 ? TRP A 324 ? THR A 420 TRP A 423 AA1 2 LEU A 329 ? ARG A 332 ? LEU A 428 ARG A 431 AA2 1 GLN B 3 ? SER B 7 ? GLN B 3 SER B 7 AA2 2 ARG B 17 ? SER B 23 ? ARG B 20 SER B 26 AA2 3 THR B 75 ? MET B 80 ? THR B 86 MET B 91 AA2 4 PHE B 65 ? ASP B 70 ? PHE B 76 ASP B 81 AA3 1 GLY B 10 ? VAL B 12 ? GLY B 11 VAL B 13 AA3 2 THR B 115 ? VAL B 119 ? THR B 122 VAL B 126 AA3 3 ALA B 89 ? ARG B 98 ? ALA B 100 ARG B 109 AA3 4 ALA B 31 ? ARG B 37 ? ALA B 38 ARG B 44 AA3 5 GLU B 44 ? ILE B 49 ? GLU B 51 ILE B 56 AA3 6 THR B 55 ? TYR B 57 ? THR B 65 TYR B 67 AA4 1 GLY B 10 ? VAL B 12 ? GLY B 11 VAL B 13 AA4 2 THR B 115 ? VAL B 119 ? THR B 122 VAL B 126 AA4 3 ALA B 89 ? ARG B 98 ? ALA B 100 ARG B 109 AA4 4 ASP B 106 ? ARG B 111 ? ASP B 113 ARG B 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N CYS A 323 ? N CYS A 422 O VAL A 330 ? O VAL A 429 AA2 1 2 N GLN B 3 ? N GLN B 3 O SER B 23 ? O SER B 26 AA2 2 3 N CYS B 20 ? N CYS B 23 O LEU B 76 ? O LEU B 87 AA2 3 4 O TYR B 77 ? O TYR B 88 N SER B 68 ? N SER B 79 AA3 1 2 N GLY B 10 ? N GLY B 11 O LEU B 116 ? O LEU B 123 AA3 2 3 O THR B 115 ? O THR B 122 N TYR B 91 ? N TYR B 102 AA3 3 4 O VAL B 90 ? O VAL B 101 N ARG B 37 ? N ARG B 44 AA3 4 5 N MET B 32 ? N MET B 39 O ILE B 49 ? O ILE B 56 AA3 5 6 N THR B 48 ? N THR B 55 O SER B 56 ? O SER B 66 AA4 1 2 N GLY B 10 ? N GLY B 11 O LEU B 116 ? O LEU B 123 AA4 2 3 O THR B 115 ? O THR B 122 N TYR B 91 ? N TYR B 102 AA4 3 4 N ASN B 95 ? N ASN B 106 O SER B 109 ? O SER B 116 # _pdbx_entry_details.entry_id 9NTT _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 75 ? ? CZ B ARG 75 ? ? NH1 B ARG 75 ? ? 123.92 120.30 3.62 0.50 N 2 1 NE B ARG 80 ? ? CZ B ARG 80 ? ? NH1 B ARG 80 ? ? 123.94 120.30 3.64 0.50 N 3 1 NE B ARG 109 ? ? CZ B ARG 109 ? ? NH1 B ARG 109 ? ? 123.60 120.30 3.30 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 36 ? ? -89.04 -148.37 2 1 SER A 60 ? ? -173.53 125.91 3 1 ASP A 61 ? ? -144.79 40.75 4 1 VAL A 64 ? ? -135.87 -61.61 5 1 GLN A 426 ? ? -151.54 -19.93 6 1 SER A 433 ? ? -95.82 -84.42 7 1 THR A 475 ? ? -69.16 2.06 8 1 SER B 93 ? ? 45.31 75.70 9 1 ARG B 111 B ? 63.72 -50.24 10 1 PRO B 112 A ? -81.38 32.09 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id THR _pdbx_validate_chiral.auth_seq_id 110 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 68 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.084 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C A ARG 39 ? ? N A GLY 59 ? ? 21.14 2 1 C A ALA 114 ? ? N A PHE 115 ? ? 7.92 3 1 C A GLY 186 ? ? N A LEU 192 ? ? 10.30 4 1 C A GLY 209 ? ? N A PHE 211 ? ? 3.41 5 1 C A THR 226 ? ? N A ILE 228 ? ? 6.51 6 1 C A VAL 239 ? ? N A ASN 241 ? ? 3.26 7 1 C A LYS 247 ? ? N A SER 249 ? ? 4.51 8 1 C A MET 310 ? ? N A ASP 315 ? ? 10.84 9 1 C A CYS 349 ? ? N A THR 383 ? ? 56.56 10 1 C A GLN 434 ? ? N A PRO 457 ? ? 27.52 11 1 C A LEU 466 ? ? N A HIS 468 ? ? 3.27 12 1 C B GLY 16 ? ? N B LEU 19 ? ? 7.88 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9NTT _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9NTT _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 7.45 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 27317 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'GPC3 A0226018C08 complex' ? ? ? 1,2 2 1 RECOMBINANT COMPLEX GPC3 ? ? ? 1 3 1 RECOMBINANT COMPLEX A0226018C08 ? ? ? 2 # _em_imaging.entry_id 9NTT _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9NTT _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9NTT _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state '2D ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B HIS 129 ? B HIS 122 2 1 Y 1 B HIS 130 ? B HIS 123 3 1 Y 1 B HIS 131 ? B HIS 124 4 1 Y 1 B HIS 132 ? B HIS 125 5 1 Y 1 B HIS 133 ? B HIS 126 6 1 Y 1 B HIS 134 ? B HIS 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2025-03-18 _em_admin.deposition_site RCSB _em_admin.entry_id 9NTT _em_admin.last_update 2026-01-14 _em_admin.map_release_date 2026-01-14 _em_admin.title ;Identification and non-clinical characterization of SAR444200, a novel anti-GPC3 T-cell engager for the treatment of GPC3+ solid tumors ; # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 2 9606 'Homo sapiens' ? ? ? ? ? ? ? 3 3 9844 'Lama glama' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 2 9606 'Homo sapiens' ? ? ? 3 3 562 'Escherichia coli' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 80 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9NTT _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #