data_9O01 # _entry.id 9O01 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9O01 pdb_00009o01 10.2210/pdb9o01/pdb WWPDB D_1000292504 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-15 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9O01 _pdbx_database_status.recvd_initial_deposition_date 2025-04-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 9O00 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email JTainer@mdanderson.org _pdbx_contact_author.name_first John _pdbx_contact_author.name_last Tainer _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1659-2429 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huffman, J.L.' 1 ? 'Tang, H.Y.H.' 2 ? 'Syed, A.' 3 0000-0001-7942-3900 'Arvai, A.S.' 4 0000-0002-5376-3728 'Mol, C.D.' 5 ? 'Tainer, J.A.' 6 0000-0003-1659-2429 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of AfOgg1-D140N mutant bound to 8-OG DNA duplex in an intermediate state' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huffman, J.L.' 1 ? primary 'Tang, H.Y.H.' 2 ? primary 'Syed, A.' 3 0000-0001-7942-3900 primary 'Arvai, A.S.' 4 0000-0002-5376-3728 primary 'Mol, C.D.' 5 ? primary 'Tainer, J.A.' 6 0000-0003-1659-2429 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '8-oxoguanine DNA glycosylase/AP lyase' 23166.939 1 3.2.2.-,4.2.99.18 D140N ? ? 2 polymer syn ;DNA (5'-D(P*GP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*CP*T)-3') ; 4866.141 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3') ; 4948.217 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 63 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ISEFGSIEKAISRRIKEFRQLGEKGEVEFDFRPFLDFSVKATIRTELAFCISTANSSATAGLKFQRLLGQGVGVKEALTL AGVRFHNRKAEYIREAFKSFKLVEKALEAESSKAREILLKIKGLGMKEASHFLRNVGREDVAIINRHILRWLERQGYEVP GTMTAKKYLEVEKILMEISEERGESLAEMDLRIWAEMTGKVLK ; ;ISEFGSIEKAISRRIKEFRQLGEKGEVEFDFRPFLDFSVKATIRTELAFCISTANSSATAGLKFQRLLGQGVGVKEALTL AGVRFHNRKAEYIREAFKSFKLVEKALEAESSKAREILLKIKGLGMKEASHFLRNVGREDVAIINRHILRWLERQGYEVP GTMTAKKYLEVEKILMEISEERGESLAEMDLRIWAEMTGKVLK ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DG)(DT)(DC)(DC)(DA)(8OG)(DG)(DT)(DC)(DT)(DA)(DC)(DC)(DT)' GCGTCCAGGTCTACCT B ? 3 polydeoxyribonucleotide no no '(DA)(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)(DG)(DC)' AGGTAGACCTGGACGC C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 SER n 1 3 GLU n 1 4 PHE n 1 5 GLY n 1 6 SER n 1 7 ILE n 1 8 GLU n 1 9 LYS n 1 10 ALA n 1 11 ILE n 1 12 SER n 1 13 ARG n 1 14 ARG n 1 15 ILE n 1 16 LYS n 1 17 GLU n 1 18 PHE n 1 19 ARG n 1 20 GLN n 1 21 LEU n 1 22 GLY n 1 23 GLU n 1 24 LYS n 1 25 GLY n 1 26 GLU n 1 27 VAL n 1 28 GLU n 1 29 PHE n 1 30 ASP n 1 31 PHE n 1 32 ARG n 1 33 PRO n 1 34 PHE n 1 35 LEU n 1 36 ASP n 1 37 PHE n 1 38 SER n 1 39 VAL n 1 40 LYS n 1 41 ALA n 1 42 THR n 1 43 ILE n 1 44 ARG n 1 45 THR n 1 46 GLU n 1 47 LEU n 1 48 ALA n 1 49 PHE n 1 50 CYS n 1 51 ILE n 1 52 SER n 1 53 THR n 1 54 ALA n 1 55 ASN n 1 56 SER n 1 57 SER n 1 58 ALA n 1 59 THR n 1 60 ALA n 1 61 GLY n 1 62 LEU n 1 63 LYS n 1 64 PHE n 1 65 GLN n 1 66 ARG n 1 67 LEU n 1 68 LEU n 1 69 GLY n 1 70 GLN n 1 71 GLY n 1 72 VAL n 1 73 GLY n 1 74 VAL n 1 75 LYS n 1 76 GLU n 1 77 ALA n 1 78 LEU n 1 79 THR n 1 80 LEU n 1 81 ALA n 1 82 GLY n 1 83 VAL n 1 84 ARG n 1 85 PHE n 1 86 HIS n 1 87 ASN n 1 88 ARG n 1 89 LYS n 1 90 ALA n 1 91 GLU n 1 92 TYR n 1 93 ILE n 1 94 ARG n 1 95 GLU n 1 96 ALA n 1 97 PHE n 1 98 LYS n 1 99 SER n 1 100 PHE n 1 101 LYS n 1 102 LEU n 1 103 VAL n 1 104 GLU n 1 105 LYS n 1 106 ALA n 1 107 LEU n 1 108 GLU n 1 109 ALA n 1 110 GLU n 1 111 SER n 1 112 SER n 1 113 LYS n 1 114 ALA n 1 115 ARG n 1 116 GLU n 1 117 ILE n 1 118 LEU n 1 119 LEU n 1 120 LYS n 1 121 ILE n 1 122 LYS n 1 123 GLY n 1 124 LEU n 1 125 GLY n 1 126 MET n 1 127 LYS n 1 128 GLU n 1 129 ALA n 1 130 SER n 1 131 HIS n 1 132 PHE n 1 133 LEU n 1 134 ARG n 1 135 ASN n 1 136 VAL n 1 137 GLY n 1 138 ARG n 1 139 GLU n 1 140 ASP n 1 141 VAL n 1 142 ALA n 1 143 ILE n 1 144 ILE n 1 145 ASN n 1 146 ARG n 1 147 HIS n 1 148 ILE n 1 149 LEU n 1 150 ARG n 1 151 TRP n 1 152 LEU n 1 153 GLU n 1 154 ARG n 1 155 GLN n 1 156 GLY n 1 157 TYR n 1 158 GLU n 1 159 VAL n 1 160 PRO n 1 161 GLY n 1 162 THR n 1 163 MET n 1 164 THR n 1 165 ALA n 1 166 LYS n 1 167 LYS n 1 168 TYR n 1 169 LEU n 1 170 GLU n 1 171 VAL n 1 172 GLU n 1 173 LYS n 1 174 ILE n 1 175 LEU n 1 176 MET n 1 177 GLU n 1 178 ILE n 1 179 SER n 1 180 GLU n 1 181 GLU n 1 182 ARG n 1 183 GLY n 1 184 GLU n 1 185 SER n 1 186 LEU n 1 187 ALA n 1 188 GLU n 1 189 MET n 1 190 ASP n 1 191 LEU n 1 192 ARG n 1 193 ILE n 1 194 TRP n 1 195 ALA n 1 196 GLU n 1 197 MET n 1 198 THR n 1 199 GLY n 1 200 LYS n 1 201 VAL n 1 202 LEU n 1 203 LYS n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 DC n 2 7 DA n 2 8 8OG n 2 9 DG n 2 10 DT n 2 11 DC n 2 12 DT n 2 13 DA n 2 14 DC n 2 15 DC n 2 16 DT n 3 1 DA n 3 2 DG n 3 3 DG n 3 4 DT n 3 5 DA n 3 6 DG n 3 7 DA n 3 8 DC n 3 9 DC n 3 10 DT n 3 11 DG n 3 12 DG n 3 13 DA n 3 14 DC n 3 15 DG n 3 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 203 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ogg, AF_0371' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2234 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 16 'synthetic construct' ? 32630 ? 3 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 GLU 3 -2 ? ? ? A . n A 1 4 PHE 4 -1 ? ? ? A . n A 1 5 GLY 5 0 ? ? ? A . n A 1 6 SER 6 1 1 SER SER A . n A 1 7 ILE 7 2 2 ILE ILE A . n A 1 8 GLU 8 3 3 GLU GLU A . n A 1 9 LYS 9 4 4 LYS LYS A . n A 1 10 ALA 10 5 5 ALA ALA A . n A 1 11 ILE 11 6 6 ILE ILE A . n A 1 12 SER 12 7 7 SER SER A . n A 1 13 ARG 13 8 8 ARG ARG A . n A 1 14 ARG 14 9 9 ARG ARG A . n A 1 15 ILE 15 10 10 ILE ILE A . n A 1 16 LYS 16 11 11 LYS LYS A . n A 1 17 GLU 17 12 12 GLU GLU A . n A 1 18 PHE 18 13 13 PHE PHE A . n A 1 19 ARG 19 14 14 ARG ARG A . n A 1 20 GLN 20 15 15 GLN GLN A . n A 1 21 LEU 21 16 16 LEU LEU A . n A 1 22 GLY 22 17 17 GLY GLY A . n A 1 23 GLU 23 18 18 GLU GLU A . n A 1 24 LYS 24 19 19 LYS LYS A . n A 1 25 GLY 25 20 20 GLY GLY A . n A 1 26 GLU 26 21 21 GLU GLU A . n A 1 27 VAL 27 22 22 VAL VAL A . n A 1 28 GLU 28 23 23 GLU GLU A . n A 1 29 PHE 29 24 24 PHE PHE A . n A 1 30 ASP 30 25 25 ASP ASP A . n A 1 31 PHE 31 26 26 PHE PHE A . n A 1 32 ARG 32 27 27 ARG ARG A . n A 1 33 PRO 33 28 28 PRO PRO A . n A 1 34 PHE 34 29 29 PHE PHE A . n A 1 35 LEU 35 30 30 LEU LEU A . n A 1 36 ASP 36 31 31 ASP ASP A . n A 1 37 PHE 37 32 32 PHE PHE A . n A 1 38 SER 38 33 33 SER SER A . n A 1 39 VAL 39 34 34 VAL VAL A . n A 1 40 LYS 40 35 35 LYS LYS A . n A 1 41 ALA 41 36 36 ALA ALA A . n A 1 42 THR 42 37 37 THR THR A . n A 1 43 ILE 43 38 38 ILE ILE A . n A 1 44 ARG 44 39 39 ARG ARG A . n A 1 45 THR 45 40 40 THR THR A . n A 1 46 GLU 46 41 41 GLU GLU A . n A 1 47 LEU 47 42 42 LEU LEU A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 PHE 49 44 44 PHE PHE A . n A 1 50 CYS 50 45 45 CYS CYS A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 SER 52 47 47 SER SER A . n A 1 53 THR 53 48 48 THR THR A . n A 1 54 ALA 54 49 49 ALA ALA A . n A 1 55 ASN 55 50 50 ASN ASN A . n A 1 56 SER 56 51 51 SER SER A . n A 1 57 SER 57 52 52 SER SER A . n A 1 58 ALA 58 53 53 ALA ALA A . n A 1 59 THR 59 54 54 THR THR A . n A 1 60 ALA 60 55 55 ALA ALA A . n A 1 61 GLY 61 56 56 GLY GLY A . n A 1 62 LEU 62 57 57 LEU LEU A . n A 1 63 LYS 63 58 58 LYS LYS A . n A 1 64 PHE 64 59 59 PHE PHE A . n A 1 65 GLN 65 60 60 GLN GLN A . n A 1 66 ARG 66 61 61 ARG ARG A . n A 1 67 LEU 67 62 62 LEU LEU A . n A 1 68 LEU 68 63 63 LEU LEU A . n A 1 69 GLY 69 64 64 GLY GLY A . n A 1 70 GLN 70 65 65 GLN GLN A . n A 1 71 GLY 71 66 66 GLY GLY A . n A 1 72 VAL 72 67 67 VAL VAL A . n A 1 73 GLY 73 68 68 GLY GLY A . n A 1 74 VAL 74 69 69 VAL VAL A . n A 1 75 LYS 75 70 70 LYS LYS A . n A 1 76 GLU 76 71 71 GLU GLU A . n A 1 77 ALA 77 72 72 ALA ALA A . n A 1 78 LEU 78 73 73 LEU LEU A . n A 1 79 THR 79 74 74 THR THR A . n A 1 80 LEU 80 75 75 LEU LEU A . n A 1 81 ALA 81 76 76 ALA ALA A . n A 1 82 GLY 82 77 77 GLY GLY A . n A 1 83 VAL 83 78 78 VAL VAL A . n A 1 84 ARG 84 79 79 ARG ARG A . n A 1 85 PHE 85 80 80 PHE PHE A . n A 1 86 HIS 86 81 81 HIS HIS A . n A 1 87 ASN 87 82 82 ASN ASN A . n A 1 88 ARG 88 83 83 ARG ARG A . n A 1 89 LYS 89 84 84 LYS LYS A . n A 1 90 ALA 90 85 85 ALA ALA A . n A 1 91 GLU 91 86 86 GLU GLU A . n A 1 92 TYR 92 87 87 TYR TYR A . n A 1 93 ILE 93 88 88 ILE ILE A . n A 1 94 ARG 94 89 89 ARG ARG A . n A 1 95 GLU 95 90 90 GLU GLU A . n A 1 96 ALA 96 91 91 ALA ALA A . n A 1 97 PHE 97 92 92 PHE PHE A . n A 1 98 LYS 98 93 93 LYS LYS A . n A 1 99 SER 99 94 94 SER SER A . n A 1 100 PHE 100 95 95 PHE PHE A . n A 1 101 LYS 101 96 96 LYS LYS A . n A 1 102 LEU 102 97 97 LEU LEU A . n A 1 103 VAL 103 98 98 VAL VAL A . n A 1 104 GLU 104 99 99 GLU GLU A . n A 1 105 LYS 105 100 100 LYS LYS A . n A 1 106 ALA 106 101 101 ALA ALA A . n A 1 107 LEU 107 102 102 LEU LEU A . n A 1 108 GLU 108 103 103 GLU GLU A . n A 1 109 ALA 109 104 104 ALA ALA A . n A 1 110 GLU 110 105 105 GLU GLU A . n A 1 111 SER 111 106 106 SER SER A . n A 1 112 SER 112 107 107 SER SER A . n A 1 113 LYS 113 108 108 LYS LYS A . n A 1 114 ALA 114 109 109 ALA ALA A . n A 1 115 ARG 115 110 110 ARG ARG A . n A 1 116 GLU 116 111 111 GLU GLU A . n A 1 117 ILE 117 112 112 ILE ILE A . n A 1 118 LEU 118 113 113 LEU LEU A . n A 1 119 LEU 119 114 114 LEU LEU A . n A 1 120 LYS 120 115 115 LYS LYS A . n A 1 121 ILE 121 116 116 ILE ILE A . n A 1 122 LYS 122 117 117 LYS LYS A . n A 1 123 GLY 123 118 118 GLY GLY A . n A 1 124 LEU 124 119 119 LEU LEU A . n A 1 125 GLY 125 120 120 GLY GLY A . n A 1 126 MET 126 121 121 MET MET A . n A 1 127 LYS 127 122 122 LYS LYS A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 ALA 129 124 124 ALA ALA A . n A 1 130 SER 130 125 125 SER SER A . n A 1 131 HIS 131 126 126 HIS HIS A . n A 1 132 PHE 132 127 127 PHE PHE A . n A 1 133 LEU 133 128 128 LEU LEU A . n A 1 134 ARG 134 129 129 ARG ARG A . n A 1 135 ASN 135 130 130 ASN ASN A . n A 1 136 VAL 136 131 131 VAL VAL A . n A 1 137 GLY 137 132 132 GLY GLY A . n A 1 138 ARG 138 133 133 ARG ARG A . n A 1 139 GLU 139 134 134 GLU GLU A . n A 1 140 ASP 140 135 135 ASP ASP A . n A 1 141 VAL 141 136 136 VAL VAL A . n A 1 142 ALA 142 137 137 ALA ALA A . n A 1 143 ILE 143 138 138 ILE ILE A . n A 1 144 ILE 144 139 139 ILE ILE A . n A 1 145 ASN 145 140 140 ASN ASN A . n A 1 146 ARG 146 141 141 ARG ARG A . n A 1 147 HIS 147 142 142 HIS HIS A . n A 1 148 ILE 148 143 143 ILE ILE A . n A 1 149 LEU 149 144 144 LEU LEU A . n A 1 150 ARG 150 145 145 ARG ARG A . n A 1 151 TRP 151 146 146 TRP TRP A . n A 1 152 LEU 152 147 147 LEU LEU A . n A 1 153 GLU 153 148 148 GLU GLU A . n A 1 154 ARG 154 149 149 ARG ARG A . n A 1 155 GLN 155 150 150 GLN GLN A . n A 1 156 GLY 156 151 151 GLY GLY A . n A 1 157 TYR 157 152 152 TYR TYR A . n A 1 158 GLU 158 153 153 GLU GLU A . n A 1 159 VAL 159 154 154 VAL VAL A . n A 1 160 PRO 160 155 155 PRO PRO A . n A 1 161 GLY 161 156 156 GLY GLY A . n A 1 162 THR 162 157 157 THR THR A . n A 1 163 MET 163 158 158 MET MET A . n A 1 164 THR 164 159 159 THR THR A . n A 1 165 ALA 165 160 160 ALA ALA A . n A 1 166 LYS 166 161 161 LYS LYS A . n A 1 167 LYS 167 162 162 LYS LYS A . n A 1 168 TYR 168 163 163 TYR TYR A . n A 1 169 LEU 169 164 164 LEU LEU A . n A 1 170 GLU 170 165 165 GLU GLU A . n A 1 171 VAL 171 166 166 VAL VAL A . n A 1 172 GLU 172 167 167 GLU GLU A . n A 1 173 LYS 173 168 168 LYS LYS A . n A 1 174 ILE 174 169 169 ILE ILE A . n A 1 175 LEU 175 170 170 LEU LEU A . n A 1 176 MET 176 171 171 MET MET A . n A 1 177 GLU 177 172 172 GLU GLU A . n A 1 178 ILE 178 173 173 ILE ILE A . n A 1 179 SER 179 174 174 SER SER A . n A 1 180 GLU 180 175 175 GLU GLU A . n A 1 181 GLU 181 176 176 GLU GLU A . n A 1 182 ARG 182 177 177 ARG ARG A . n A 1 183 GLY 183 178 178 GLY GLY A . n A 1 184 GLU 184 179 179 GLU GLU A . n A 1 185 SER 185 180 180 SER SER A . n A 1 186 LEU 186 181 181 LEU LEU A . n A 1 187 ALA 187 182 182 ALA ALA A . n A 1 188 GLU 188 183 183 GLU GLU A . n A 1 189 MET 189 184 184 MET MET A . n A 1 190 ASP 190 185 185 ASP ASP A . n A 1 191 LEU 191 186 186 LEU LEU A . n A 1 192 ARG 192 187 187 ARG ARG A . n A 1 193 ILE 193 188 188 ILE ILE A . n A 1 194 TRP 194 189 189 TRP TRP A . n A 1 195 ALA 195 190 190 ALA ALA A . n A 1 196 GLU 196 191 191 GLU GLU A . n A 1 197 MET 197 192 192 MET MET A . n A 1 198 THR 198 193 193 THR THR A . n A 1 199 GLY 199 194 194 GLY GLY A . n A 1 200 LYS 200 195 195 LYS LYS A . n A 1 201 VAL 201 196 196 VAL VAL A . n A 1 202 LEU 202 197 197 LEU LEU A . n A 1 203 LYS 203 198 198 LYS LYS A . n B 2 1 DG 1 -7 -7 DG DG B . n B 2 2 DC 2 -6 -6 DC DC B . n B 2 3 DG 3 -5 -5 DG DG B . n B 2 4 DT 4 -4 -4 DT DT B . n B 2 5 DC 5 -3 -3 DC DC B . n B 2 6 DC 6 -2 -2 DC DC B . n B 2 7 DA 7 -1 -1 DA DA B . n B 2 8 8OG 8 0 0 8OG 8OG B . n B 2 9 DG 9 1 1 DG DG B . n B 2 10 DT 10 2 2 DT DT B . n B 2 11 DC 11 3 3 DC DC B . n B 2 12 DT 12 4 4 DT DT B . n B 2 13 DA 13 5 5 DA DA B . n B 2 14 DC 14 6 6 DC DC B . n B 2 15 DC 15 7 7 DC DC B . n B 2 16 DT 16 8 ? ? ? B . n C 3 1 DA 1 -6 -6 DA DA C . n C 3 2 DG 2 -5 -5 DG DG C . n C 3 3 DG 3 -4 -4 DG DG C . n C 3 4 DT 4 -3 -3 DT DT C . n C 3 5 DA 5 -2 -2 DA DA C . n C 3 6 DG 6 -1 -1 DG DG C . n C 3 7 DA 7 0 0 DA DA C . n C 3 8 DC 8 1 1 DC DC C . n C 3 9 DC 9 2 2 DC DC C . n C 3 10 DT 10 3 3 DT DT C . n C 3 11 DG 11 4 4 DG DG C . n C 3 12 DG 12 5 5 DG DG C . n C 3 13 DA 13 6 6 DA DA C . n C 3 14 DC 14 7 7 DC DC C . n C 3 15 DG 15 8 8 DG DG C . n C 3 16 DC 16 9 9 DC DC C . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 8OG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 8OG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 201 1 MG MG A . E 5 HOH 1 301 48 HOH HOH A . E 5 HOH 2 302 20 HOH HOH A . E 5 HOH 3 303 7 HOH HOH A . E 5 HOH 4 304 31 HOH HOH A . E 5 HOH 5 305 2 HOH HOH A . E 5 HOH 6 306 47 HOH HOH A . E 5 HOH 7 307 1 HOH HOH A . E 5 HOH 8 308 59 HOH HOH A . E 5 HOH 9 309 5 HOH HOH A . E 5 HOH 10 310 58 HOH HOH A . E 5 HOH 11 311 6 HOH HOH A . E 5 HOH 12 312 45 HOH HOH A . E 5 HOH 13 313 22 HOH HOH A . E 5 HOH 14 314 35 HOH HOH A . E 5 HOH 15 315 17 HOH HOH A . E 5 HOH 16 316 24 HOH HOH A . E 5 HOH 17 317 8 HOH HOH A . E 5 HOH 18 318 46 HOH HOH A . E 5 HOH 19 319 12 HOH HOH A . E 5 HOH 20 320 3 HOH HOH A . E 5 HOH 21 321 18 HOH HOH A . E 5 HOH 22 322 19 HOH HOH A . E 5 HOH 23 323 36 HOH HOH A . E 5 HOH 24 324 9 HOH HOH A . E 5 HOH 25 325 10 HOH HOH A . E 5 HOH 26 326 11 HOH HOH A . E 5 HOH 27 327 13 HOH HOH A . E 5 HOH 28 328 42 HOH HOH A . E 5 HOH 29 329 37 HOH HOH A . E 5 HOH 30 330 60 HOH HOH A . E 5 HOH 31 331 21 HOH HOH A . E 5 HOH 32 332 57 HOH HOH A . E 5 HOH 33 333 32 HOH HOH A . E 5 HOH 34 334 51 HOH HOH A . E 5 HOH 35 335 30 HOH HOH A . E 5 HOH 36 336 55 HOH HOH A . E 5 HOH 37 337 54 HOH HOH A . E 5 HOH 38 338 40 HOH HOH A . E 5 HOH 39 339 44 HOH HOH A . E 5 HOH 40 340 61 HOH HOH A . E 5 HOH 41 341 56 HOH HOH A . F 5 HOH 1 101 63 HOH HOH B . F 5 HOH 2 102 34 HOH HOH B . F 5 HOH 3 103 38 HOH HOH B . F 5 HOH 4 104 15 HOH HOH B . F 5 HOH 5 105 26 HOH HOH B . F 5 HOH 6 106 23 HOH HOH B . F 5 HOH 7 107 25 HOH HOH B . F 5 HOH 8 108 14 HOH HOH B . F 5 HOH 9 109 4 HOH HOH B . F 5 HOH 10 110 52 HOH HOH B . F 5 HOH 11 111 16 HOH HOH B . F 5 HOH 12 112 62 HOH HOH B . F 5 HOH 13 113 41 HOH HOH B . G 5 HOH 1 101 28 HOH HOH C . G 5 HOH 2 102 39 HOH HOH C . G 5 HOH 3 103 43 HOH HOH C . G 5 HOH 4 104 27 HOH HOH C . G 5 HOH 5 105 53 HOH HOH C . G 5 HOH 6 106 50 HOH HOH C . G 5 HOH 7 107 33 HOH HOH C . G 5 HOH 8 108 49 HOH HOH C . G 5 HOH 9 109 29 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 18 ? CG ? A GLU 23 CG 2 1 Y 1 A GLU 18 ? CD ? A GLU 23 CD 3 1 Y 1 A GLU 18 ? OE1 ? A GLU 23 OE1 4 1 Y 1 A GLU 18 ? OE2 ? A GLU 23 OE2 5 1 Y 1 A GLU 86 ? CG ? A GLU 91 CG 6 1 Y 1 A GLU 86 ? CD ? A GLU 91 CD 7 1 Y 1 A GLU 86 ? OE1 ? A GLU 91 OE1 8 1 Y 1 A GLU 86 ? OE2 ? A GLU 91 OE2 9 1 Y 1 A GLU 153 ? CG ? A GLU 158 CG 10 1 Y 1 A GLU 153 ? CD ? A GLU 158 CD 11 1 Y 1 A GLU 153 ? OE1 ? A GLU 158 OE1 12 1 Y 1 A GLU 153 ? OE2 ? A GLU 158 OE2 13 1 Y 1 A GLU 175 ? CG ? A GLU 180 CG 14 1 Y 1 A GLU 175 ? CD ? A GLU 180 CD 15 1 Y 1 A GLU 175 ? OE1 ? A GLU 180 OE1 16 1 Y 1 A GLU 175 ? OE2 ? A GLU 180 OE2 17 1 Y 1 A GLU 176 ? CG ? A GLU 181 CG 18 1 Y 1 A GLU 176 ? CD ? A GLU 181 CD 19 1 Y 1 A GLU 176 ? OE1 ? A GLU 181 OE1 20 1 Y 1 A GLU 176 ? OE2 ? A GLU 181 OE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487: ???)' ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 100.46 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9O01 _cell.details ? _cell.formula_units_Z ? _cell.length_a 52.013 _cell.length_a_esd ? _cell.length_b 52.839 _cell.length_b_esd ? _cell.length_c 53.459 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9O01 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9O01 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20-30% PEG4000, 100 mM MES, pH 6.5, 5% potassium permanganate (saturated)' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2002-04-01 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11699 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.11699 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 34.74 _reflns.entry_id 9O01 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 40.52 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20265 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 1.99 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1176 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.215 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.87 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9O01 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.95 _refine.ls_d_res_low 40.52 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19513 _refine.ls_number_reflns_R_free 1911 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 82.17 _refine.ls_percent_reflns_R_free 9.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2252 _refine.ls_R_factor_R_free 0.2598 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2214 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.15 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.36 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1570 _refine_hist.pdbx_number_atoms_nucleic_acid 634 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 63 _refine_hist.number_atoms_total 2268 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 40.52 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 ? ? ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.712 ? ? ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 24.877 ? 522 ? f_dihedral_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.042 ? 362 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 304 ? f_plane_restr ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.95 1.98 . . 25 292 18.00 . . . . 0.5359 . . . . . . . . . . . . . . . 0.5831 'X-RAY DIFFRACTION' 1.98 2.00 . . 98 876 57.00 . . . . 0.4359 . . . . . . . . . . . . . . . 0.4960 'X-RAY DIFFRACTION' 2.01 2.04 . . 81 752 49.00 . . . . 0.4329 . . . . . . . . . . . . . . . 0.4730 'X-RAY DIFFRACTION' 2.04 2.07 . . 119 1102 72.00 . . . . 0.3993 . . . . . . . . . . . . . . . 0.3904 'X-RAY DIFFRACTION' 2.07 2.11 . . 124 1189 78.00 . . . . 0.3791 . . . . . . . . . . . . . . . 0.4304 'X-RAY DIFFRACTION' 2.11 2.14 . . 149 1262 83.00 . . . . 0.3627 . . . . . . . . . . . . . . . 0.3494 'X-RAY DIFFRACTION' 2.14 2.18 . . 134 1314 84.00 . . . . 0.3659 . . . . . . . . . . . . . . . 0.3178 'X-RAY DIFFRACTION' 2.18 2.23 . . 171 1305 87.00 . . . . 0.3231 . . . . . . . . . . . . . . . 0.3928 'X-RAY DIFFRACTION' 2.23 2.28 . . 126 1325 86.00 . . . . 0.3163 . . . . . . . . . . . . . . . 0.3398 'X-RAY DIFFRACTION' 2.28 2.33 . . 153 1357 88.00 . . . . 0.2942 . . . . . . . . . . . . . . . 0.3198 'X-RAY DIFFRACTION' 2.33 2.39 . . 161 1388 89.00 . . . . 0.2878 . . . . . . . . . . . . . . . 0.3265 'X-RAY DIFFRACTION' 2.39 2.45 . . 145 1356 89.00 . . . . 0.2729 . . . . . . . . . . . . . . . 0.3617 'X-RAY DIFFRACTION' 2.45 2.53 . . 142 1372 89.00 . . . . 0.2513 . . . . . . . . . . . . . . . 0.3070 'X-RAY DIFFRACTION' 2.53 2.61 . . 159 1394 90.00 . . . . 0.2409 . . . . . . . . . . . . . . . 0.2841 'X-RAY DIFFRACTION' 2.61 2.70 . . 146 1381 90.00 . . . . 0.2293 . . . . . . . . . . . . . . . 0.2614 'X-RAY DIFFRACTION' 2.70 2.81 . . 156 1385 91.00 . . . . 0.2266 . . . . . . . . . . . . . . . 0.2074 'X-RAY DIFFRACTION' 2.81 2.94 . . 166 1410 91.00 . . . . 0.2242 . . . . . . . . . . . . . . . 0.2843 'X-RAY DIFFRACTION' 2.94 3.09 . . 154 1390 91.00 . . . . 0.2263 . . . . . . . . . . . . . . . 0.3052 'X-RAY DIFFRACTION' 3.09 3.29 . . 159 1404 92.00 . . . . 0.1856 . . . . . . . . . . . . . . . 0.2406 'X-RAY DIFFRACTION' 3.29 3.54 . . 155 1400 91.00 . . . . 0.1779 . . . . . . . . . . . . . . . 0.2094 'X-RAY DIFFRACTION' 3.54 3.89 . . 155 1419 92.00 . . . . 0.1565 . . . . . . . . . . . . . . . 0.1985 'X-RAY DIFFRACTION' 3.89 4.46 . . 155 1389 91.00 . . . . 0.1615 . . . . . . . . . . . . . . . 0.1961 'X-RAY DIFFRACTION' 4.46 5.61 . . 149 1401 92.00 . . . . 0.1878 . . . . . . . . . . . . . . . 0.2011 'X-RAY DIFFRACTION' 5.62 40.52 . . 140 1480 94.00 . . . . 0.2076 . . . . . . . . . . . . . . . 0.2768 # _struct.entry_id 9O01 _struct.title 'Crystal structure of AfOgg1-D140N mutant bound to 8-OG DNA duplex in an intermediate state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9O01 _struct_keywords.text 'DNA-glycosylase, AP-lyase, HYDROLASE, LYASE-DNA complex' _struct_keywords.pdbx_keywords 'HYDROLASE, LYASE/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP OGG1_ARCFU O29876 ? 1 ;IEKAISRRIKEFRQLGEKGEVEFDFRPFLDFSVKATIRTELAFCISTANSSATAGLKFQRLLGQGVGVKEALTLAGVRFH NRKAEYIREAFKSFKLVEKALEAESSKAREILLKIKGLGMKEASHFLRNVGREDVAIIDRHILRWLERQGYEVPGTMTAK KYLEVEKILMEISEERGESLAEMDLRIWAEMTGKVLK ; 2 2 PDB 9O01 9O01 ? 2 ? 1 3 PDB 9O01 9O01 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9O01 A 7 ? 203 ? O29876 2 ? 198 ? 2 198 2 2 9O01 B 1 ? 16 ? 9O01 -7 ? 8 ? -7 8 3 3 9O01 C 1 ? 16 ? 9O01 -6 ? 9 ? -6 9 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9O01 ILE A 1 ? UNP O29876 ? ? 'expression tag' -4 1 1 9O01 SER A 2 ? UNP O29876 ? ? 'expression tag' -3 2 1 9O01 GLU A 3 ? UNP O29876 ? ? 'expression tag' -2 3 1 9O01 PHE A 4 ? UNP O29876 ? ? 'expression tag' -1 4 1 9O01 GLY A 5 ? UNP O29876 ? ? 'expression tag' 0 5 1 9O01 SER A 6 ? UNP O29876 ? ? 'expression tag' 1 6 1 9O01 ASN A 145 ? UNP O29876 ASP 140 'engineered mutation' 140 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4410 ? 1 MORE -29 ? 1 'SSA (A^2)' 13120 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 6 ? GLY A 25 ? SER A 1 GLY A 20 1 ? 20 HELX_P HELX_P2 AA2 ILE A 43 ? THR A 53 ? ILE A 38 THR A 48 1 ? 11 HELX_P HELX_P3 AA3 SER A 57 ? GLN A 70 ? SER A 52 GLN A 65 1 ? 14 HELX_P HELX_P4 AA4 GLY A 73 ? GLY A 82 ? GLY A 68 GLY A 77 1 ? 10 HELX_P HELX_P5 AA5 PHE A 85 ? SER A 99 ? PHE A 80 SER A 94 1 ? 15 HELX_P HELX_P6 AA6 SER A 99 ? LEU A 107 ? SER A 94 LEU A 102 1 ? 9 HELX_P HELX_P7 AA7 GLU A 110 ? LEU A 119 ? GLU A 105 LEU A 114 1 ? 10 HELX_P HELX_P8 AA8 GLY A 125 ? VAL A 136 ? GLY A 120 VAL A 131 1 ? 12 HELX_P HELX_P9 AA9 ASN A 145 ? GLY A 156 ? ASN A 140 GLY A 151 1 ? 12 HELX_P HELX_P10 AB1 THR A 164 ? GLY A 183 ? THR A 159 GLY A 178 1 ? 20 HELX_P HELX_P11 AB2 SER A 185 ? GLY A 199 ? SER A 180 GLY A 194 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 7 "O3'" ? ? ? 1_555 B 8OG 8 P ? ? B DA -1 B 8OG 0 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale2 covale both ? B 8OG 8 "O3'" ? ? ? 1_555 B DG 9 P ? ? B 8OG 0 B DG 1 1_555 ? ? ? ? ? ? ? 1.592 ? ? metalc1 metalc ? ? A LEU 119 O ? ? ? 1_555 D MG . MG ? ? A LEU 114 A MG 201 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc2 metalc ? ? A ILE 121 O ? ? ? 1_555 D MG . MG ? ? A ILE 116 A MG 201 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc3 metalc ? ? A LEU 124 O ? ? ? 1_555 D MG . MG ? ? A LEU 119 A MG 201 1_555 ? ? ? ? ? ? ? 2.444 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 B DC 11 OP1 ? ? A MG 201 B DC 3 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 201 B HOH 108 1_555 ? ? ? ? ? ? ? 2.406 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 16 N3 ? ? B DG -7 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 16 O2 ? ? B DG -7 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 16 N4 ? ? B DG -7 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 15 N1 ? ? B DC -6 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 15 O6 ? ? B DC -6 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 15 N2 ? ? B DC -6 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 14 N3 ? ? B DG -5 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 14 O2 ? ? B DG -5 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 14 N4 ? ? B DG -5 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 13 N1 ? ? B DT -4 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 13 N6 ? ? B DT -4 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 12 N1 ? ? B DC -3 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC -3 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 12 N2 ? ? B DC -3 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC -2 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC -2 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC -2 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 10 N3 ? ? B DA -1 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 10 O4 ? ? B DA -1 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 1 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 1 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 1 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 2 C DA 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 2 C DA 0 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 3 C DG -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 3 C DG -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 3 C DG -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 4 C DA -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 4 C DA -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 4 N3 ? ? B DA 5 C DT -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DA 13 N6 ? ? ? 1_555 C DT 4 O4 ? ? B DA 5 C DT -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 6 C DG -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 6 C DG -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 6 C DG -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 7 C DG -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 7 C DG -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 7 C DG -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LEU 119 ? A LEU 114 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? A ILE 121 ? A ILE 116 ? 1_555 92.5 ? 2 O ? A LEU 119 ? A LEU 114 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? A LEU 124 ? A LEU 119 ? 1_555 99.9 ? 3 O ? A ILE 121 ? A ILE 116 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? A LEU 124 ? A LEU 119 ? 1_555 95.6 ? 4 O ? A LEU 119 ? A LEU 114 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 OP1 ? B DC 11 ? B DC 3 ? 1_555 165.3 ? 5 O ? A ILE 121 ? A ILE 116 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 OP1 ? B DC 11 ? B DC 3 ? 1_555 91.0 ? 6 O ? A LEU 124 ? A LEU 119 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 OP1 ? B DC 11 ? B DC 3 ? 1_555 94.0 ? 7 O ? A LEU 119 ? A LEU 114 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? F HOH . ? B HOH 108 ? 1_555 81.6 ? 8 O ? A ILE 121 ? A ILE 116 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? F HOH . ? B HOH 108 ? 1_555 171.4 ? 9 O ? A LEU 124 ? A LEU 119 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? F HOH . ? B HOH 108 ? 1_555 79.3 ? 10 OP1 ? B DC 11 ? B DC 3 ? 1_555 MG ? D MG . ? A MG 201 ? 1_555 O ? F HOH . ? B HOH 108 ? 1_555 96.3 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 32 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 27 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 33 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 28 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.17 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 26 ? ASP A 30 ? GLU A 21 ASP A 25 AA1 2 SER A 38 ? THR A 42 ? SER A 33 THR A 37 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 27 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 22 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ALA _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 41 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 36 # _pdbx_entry_details.entry_id 9O01 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG A SER 180 ? ? O A HOH 301 ? ? 1.30 2 1 OD1 A ASP 185 ? ? H22 B 8OG 0 ? ? 1.50 3 1 OD2 A ASP 185 ? ? H1 B 8OG 0 ? ? 1.55 4 1 HG1 A THR 37 ? ? O A HOH 304 ? ? 1.58 5 1 OG A SER 180 ? ? O A HOH 301 ? ? 1.84 6 1 O B HOH 103 ? ? O B HOH 112 ? ? 1.87 7 1 OE1 A GLU 123 ? ? O A HOH 302 ? ? 2.10 8 1 OP2 B DC -6 ? ? O B HOH 101 ? ? 2.14 9 1 O A HOH 312 ? ? O A HOH 337 ? ? 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 HE _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 149 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 H61 _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 DA _pdbx_validate_symm_contact.auth_seq_id_2 -6 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 1.32 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA -6 ? ? "C1'" C DA -6 ? ? N9 C DA -6 ? ? 111.21 108.30 2.91 0.30 N 2 1 "O4'" C DC 1 ? ? "C1'" C DC 1 ? ? N1 C DC 1 ? ? 110.63 108.30 2.33 0.30 N 3 1 "O4'" C DC 2 ? ? "C1'" C DC 2 ? ? N1 C DC 2 ? ? 110.32 108.30 2.02 0.30 N 4 1 "O4'" C DT 3 ? ? "C1'" C DT 3 ? ? N1 C DT 3 ? ? 110.79 108.30 2.49 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 31 ? ? -91.91 57.05 2 1 ARG A 141 ? ? -32.31 -72.50 3 1 LEU A 197 ? ? -102.40 -127.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE -4 ? A ILE 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 A GLU -2 ? A GLU 3 4 1 Y 1 A PHE -1 ? A PHE 4 5 1 Y 1 A GLY 0 ? A GLY 5 6 1 Y 1 B DT 8 ? B DT 16 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 DA OP3 O N N 126 DA P P N N 127 DA OP1 O N N 128 DA OP2 O N N 129 DA "O5'" O N N 130 DA "C5'" C N N 131 DA "C4'" C N R 132 DA "O4'" O N N 133 DA "C3'" C N S 134 DA "O3'" O N N 135 DA "C2'" C N N 136 DA "C1'" C N R 137 DA N9 N Y N 138 DA C8 C Y N 139 DA N7 N Y N 140 DA C5 C Y N 141 DA C6 C Y N 142 DA N6 N N N 143 DA N1 N Y N 144 DA C2 C Y N 145 DA N3 N Y N 146 DA C4 C Y N 147 DA HOP3 H N N 148 DA HOP2 H N N 149 DA "H5'" H N N 150 DA "H5''" H N N 151 DA "H4'" H N N 152 DA "H3'" H N N 153 DA "HO3'" H N N 154 DA "H2'" H N N 155 DA "H2''" H N N 156 DA "H1'" H N N 157 DA H8 H N N 158 DA H61 H N N 159 DA H62 H N N 160 DA H2 H N N 161 DC OP3 O N N 162 DC P P N N 163 DC OP1 O N N 164 DC OP2 O N N 165 DC "O5'" O N N 166 DC "C5'" C N N 167 DC "C4'" C N R 168 DC "O4'" O N N 169 DC "C3'" C N S 170 DC "O3'" O N N 171 DC "C2'" C N N 172 DC "C1'" C N R 173 DC N1 N N N 174 DC C2 C N N 175 DC O2 O N N 176 DC N3 N N N 177 DC C4 C N N 178 DC N4 N N N 179 DC C5 C N N 180 DC C6 C N N 181 DC HOP3 H N N 182 DC HOP2 H N N 183 DC "H5'" H N N 184 DC "H5''" H N N 185 DC "H4'" H N N 186 DC "H3'" H N N 187 DC "HO3'" H N N 188 DC "H2'" H N N 189 DC "H2''" H N N 190 DC "H1'" H N N 191 DC H41 H N N 192 DC H42 H N N 193 DC H5 H N N 194 DC H6 H N N 195 DG OP3 O N N 196 DG P P N N 197 DG OP1 O N N 198 DG OP2 O N N 199 DG "O5'" O N N 200 DG "C5'" C N N 201 DG "C4'" C N R 202 DG "O4'" O N N 203 DG "C3'" C N S 204 DG "O3'" O N N 205 DG "C2'" C N N 206 DG "C1'" C N R 207 DG N9 N Y N 208 DG C8 C Y N 209 DG N7 N Y N 210 DG C5 C Y N 211 DG C6 C N N 212 DG O6 O N N 213 DG N1 N N N 214 DG C2 C N N 215 DG N2 N N N 216 DG N3 N N N 217 DG C4 C Y N 218 DG HOP3 H N N 219 DG HOP2 H N N 220 DG "H5'" H N N 221 DG "H5''" H N N 222 DG "H4'" H N N 223 DG "H3'" H N N 224 DG "HO3'" H N N 225 DG "H2'" H N N 226 DG "H2''" H N N 227 DG "H1'" H N N 228 DG H8 H N N 229 DG H1 H N N 230 DG H21 H N N 231 DG H22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 HIS N N N N 318 HIS CA C N S 319 HIS C C N N 320 HIS O O N N 321 HIS CB C N N 322 HIS CG C Y N 323 HIS ND1 N Y N 324 HIS CD2 C Y N 325 HIS CE1 C Y N 326 HIS NE2 N Y N 327 HIS OXT O N N 328 HIS H H N N 329 HIS H2 H N N 330 HIS HA H N N 331 HIS HB2 H N N 332 HIS HB3 H N N 333 HIS HD1 H N N 334 HIS HD2 H N N 335 HIS HE1 H N N 336 HIS HE2 H N N 337 HIS HXT H N N 338 HOH O O N N 339 HOH H1 H N N 340 HOH H2 H N N 341 ILE N N N N 342 ILE CA C N S 343 ILE C C N N 344 ILE O O N N 345 ILE CB C N S 346 ILE CG1 C N N 347 ILE CG2 C N N 348 ILE CD1 C N N 349 ILE OXT O N N 350 ILE H H N N 351 ILE H2 H N N 352 ILE HA H N N 353 ILE HB H N N 354 ILE HG12 H N N 355 ILE HG13 H N N 356 ILE HG21 H N N 357 ILE HG22 H N N 358 ILE HG23 H N N 359 ILE HD11 H N N 360 ILE HD12 H N N 361 ILE HD13 H N N 362 ILE HXT H N N 363 LEU N N N N 364 LEU CA C N S 365 LEU C C N N 366 LEU O O N N 367 LEU CB C N N 368 LEU CG C N N 369 LEU CD1 C N N 370 LEU CD2 C N N 371 LEU OXT O N N 372 LEU H H N N 373 LEU H2 H N N 374 LEU HA H N N 375 LEU HB2 H N N 376 LEU HB3 H N N 377 LEU HG H N N 378 LEU HD11 H N N 379 LEU HD12 H N N 380 LEU HD13 H N N 381 LEU HD21 H N N 382 LEU HD22 H N N 383 LEU HD23 H N N 384 LEU HXT H N N 385 LYS N N N N 386 LYS CA C N S 387 LYS C C N N 388 LYS O O N N 389 LYS CB C N N 390 LYS CG C N N 391 LYS CD C N N 392 LYS CE C N N 393 LYS NZ N N N 394 LYS OXT O N N 395 LYS H H N N 396 LYS H2 H N N 397 LYS HA H N N 398 LYS HB2 H N N 399 LYS HB3 H N N 400 LYS HG2 H N N 401 LYS HG3 H N N 402 LYS HD2 H N N 403 LYS HD3 H N N 404 LYS HE2 H N N 405 LYS HE3 H N N 406 LYS HZ1 H N N 407 LYS HZ2 H N N 408 LYS HZ3 H N N 409 LYS HXT H N N 410 MET N N N N 411 MET CA C N S 412 MET C C N N 413 MET O O N N 414 MET CB C N N 415 MET CG C N N 416 MET SD S N N 417 MET CE C N N 418 MET OXT O N N 419 MET H H N N 420 MET H2 H N N 421 MET HA H N N 422 MET HB2 H N N 423 MET HB3 H N N 424 MET HG2 H N N 425 MET HG3 H N N 426 MET HE1 H N N 427 MET HE2 H N N 428 MET HE3 H N N 429 MET HXT H N N 430 MG MG MG N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 THR N N N N 486 THR CA C N S 487 THR C C N N 488 THR O O N N 489 THR CB C N R 490 THR OG1 O N N 491 THR CG2 C N N 492 THR OXT O N N 493 THR H H N N 494 THR H2 H N N 495 THR HA H N N 496 THR HB H N N 497 THR HG1 H N N 498 THR HG21 H N N 499 THR HG22 H N N 500 THR HG23 H N N 501 THR HXT H N N 502 TRP N N N N 503 TRP CA C N S 504 TRP C C N N 505 TRP O O N N 506 TRP CB C N N 507 TRP CG C Y N 508 TRP CD1 C Y N 509 TRP CD2 C Y N 510 TRP NE1 N Y N 511 TRP CE2 C Y N 512 TRP CE3 C Y N 513 TRP CZ2 C Y N 514 TRP CZ3 C Y N 515 TRP CH2 C Y N 516 TRP OXT O N N 517 TRP H H N N 518 TRP H2 H N N 519 TRP HA H N N 520 TRP HB2 H N N 521 TRP HB3 H N N 522 TRP HD1 H N N 523 TRP HE1 H N N 524 TRP HE3 H N N 525 TRP HZ2 H N N 526 TRP HZ3 H N N 527 TRP HH2 H N N 528 TRP HXT H N N 529 TYR N N N N 530 TYR CA C N S 531 TYR C C N N 532 TYR O O N N 533 TYR CB C N N 534 TYR CG C Y N 535 TYR CD1 C Y N 536 TYR CD2 C Y N 537 TYR CE1 C Y N 538 TYR CE2 C Y N 539 TYR CZ C Y N 540 TYR OH O N N 541 TYR OXT O N N 542 TYR H H N N 543 TYR H2 H N N 544 TYR HA H N N 545 TYR HB2 H N N 546 TYR HB3 H N N 547 TYR HD1 H N N 548 TYR HD2 H N N 549 TYR HE1 H N N 550 TYR HE2 H N N 551 TYR HH H N N 552 TYR HXT H N N 553 VAL N N N N 554 VAL CA C N S 555 VAL C C N N 556 VAL O O N N 557 VAL CB C N N 558 VAL CG1 C N N 559 VAL CG2 C N N 560 VAL OXT O N N 561 VAL H H N N 562 VAL H2 H N N 563 VAL HA H N N 564 VAL HB H N N 565 VAL HG11 H N N 566 VAL HG12 H N N 567 VAL HG13 H N N 568 VAL HG21 H N N 569 VAL HG22 H N N 570 VAL HG23 H N N 571 VAL HXT H N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 SER N CA sing N N 466 SER N H sing N N 467 SER N H2 sing N N 468 SER CA C sing N N 469 SER CA CB sing N N 470 SER CA HA sing N N 471 SER C O doub N N 472 SER C OXT sing N N 473 SER CB OG sing N N 474 SER CB HB2 sing N N 475 SER CB HB3 sing N N 476 SER OG HG sing N N 477 SER OXT HXT sing N N 478 THR N CA sing N N 479 THR N H sing N N 480 THR N H2 sing N N 481 THR CA C sing N N 482 THR CA CB sing N N 483 THR CA HA sing N N 484 THR C O doub N N 485 THR C OXT sing N N 486 THR CB OG1 sing N N 487 THR CB CG2 sing N N 488 THR CB HB sing N N 489 THR OG1 HG1 sing N N 490 THR CG2 HG21 sing N N 491 THR CG2 HG22 sing N N 492 THR CG2 HG23 sing N N 493 THR OXT HXT sing N N 494 TRP N CA sing N N 495 TRP N H sing N N 496 TRP N H2 sing N N 497 TRP CA C sing N N 498 TRP CA CB sing N N 499 TRP CA HA sing N N 500 TRP C O doub N N 501 TRP C OXT sing N N 502 TRP CB CG sing N N 503 TRP CB HB2 sing N N 504 TRP CB HB3 sing N N 505 TRP CG CD1 doub Y N 506 TRP CG CD2 sing Y N 507 TRP CD1 NE1 sing Y N 508 TRP CD1 HD1 sing N N 509 TRP CD2 CE2 doub Y N 510 TRP CD2 CE3 sing Y N 511 TRP NE1 CE2 sing Y N 512 TRP NE1 HE1 sing N N 513 TRP CE2 CZ2 sing Y N 514 TRP CE3 CZ3 doub Y N 515 TRP CE3 HE3 sing N N 516 TRP CZ2 CH2 doub Y N 517 TRP CZ2 HZ2 sing N N 518 TRP CZ3 CH2 sing Y N 519 TRP CZ3 HZ3 sing N N 520 TRP CH2 HH2 sing N N 521 TRP OXT HXT sing N N 522 TYR N CA sing N N 523 TYR N H sing N N 524 TYR N H2 sing N N 525 TYR CA C sing N N 526 TYR CA CB sing N N 527 TYR CA HA sing N N 528 TYR C O doub N N 529 TYR C OXT sing N N 530 TYR CB CG sing N N 531 TYR CB HB2 sing N N 532 TYR CB HB3 sing N N 533 TYR CG CD1 doub Y N 534 TYR CG CD2 sing Y N 535 TYR CD1 CE1 sing Y N 536 TYR CD1 HD1 sing N N 537 TYR CD2 CE2 doub Y N 538 TYR CD2 HD2 sing N N 539 TYR CE1 CZ doub Y N 540 TYR CE1 HE1 sing N N 541 TYR CE2 CZ sing Y N 542 TYR CE2 HE2 sing N N 543 TYR CZ OH sing N N 544 TYR OH HH sing N N 545 TYR OXT HXT sing N N 546 VAL N CA sing N N 547 VAL N H sing N N 548 VAL N H2 sing N N 549 VAL CA C sing N N 550 VAL CA CB sing N N 551 VAL CA HA sing N N 552 VAL C O doub N N 553 VAL C OXT sing N N 554 VAL CB CG1 sing N N 555 VAL CB CG2 sing N N 556 VAL CB HB sing N N 557 VAL CG1 HG11 sing N N 558 VAL CG1 HG12 sing N N 559 VAL CG1 HG13 sing N N 560 VAL CG2 HG21 sing N N 561 VAL CG2 HG22 sing N N 562 VAL CG2 HG23 sing N N 563 VAL OXT HXT sing N N 564 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9O01 'double helix' 9O01 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 16 1_555 -0.326 -0.124 0.243 -14.471 -15.776 -4.536 1 B_DG-7:DC9_C B -7 ? C 9 ? 19 1 1 B DC 2 1_555 C DG 15 1_555 0.002 -0.203 0.001 2.373 -6.397 3.831 2 B_DC-6:DG8_C B -6 ? C 8 ? 19 1 1 B DG 3 1_555 C DC 14 1_555 -0.279 -0.165 -0.163 -3.834 -14.834 2.821 3 B_DG-5:DC7_C B -5 ? C 7 ? 19 1 1 B DT 4 1_555 C DA 13 1_555 -0.225 -0.205 0.208 -3.817 -13.376 -0.030 4 B_DT-4:DA6_C B -4 ? C 6 ? 20 1 1 B DC 5 1_555 C DG 12 1_555 0.183 -0.117 0.024 -1.436 -10.124 3.145 5 B_DC-3:DG5_C B -3 ? C 5 ? 19 1 1 B DC 6 1_555 C DG 11 1_555 0.150 -0.323 0.517 -6.248 -10.164 -2.639 6 B_DC-2:DG4_C B -2 ? C 4 ? 19 1 1 B DA 7 1_555 C DT 10 1_555 -0.217 -0.188 0.395 9.469 0.058 8.052 7 B_DA-1:DT3_C B -1 ? C 3 ? 20 1 1 B DG 9 1_555 C DC 8 1_555 -0.449 -0.146 -0.260 -8.734 2.163 0.206 8 B_DG1:DC1_C B 1 ? C 1 ? 19 1 1 B DT 10 1_555 C DA 7 1_555 -0.269 -0.101 -0.002 -0.928 -13.048 4.552 9 B_DT2:DA0_C B 2 ? C 0 ? 20 1 1 B DC 11 1_555 C DG 6 1_555 0.120 -0.126 -0.073 -1.163 -14.590 2.465 10 B_DC3:DG-1_C B 3 ? C -1 ? 19 1 1 B DT 12 1_555 C DA 5 1_555 0.095 -0.183 0.158 -8.612 -8.016 2.249 11 B_DT4:DA-2_C B 4 ? C -2 ? 20 1 1 B DA 13 1_555 C DT 4 1_555 0.427 -0.184 0.242 8.477 -7.602 3.711 12 B_DA5:DT-3_C B 5 ? C -3 ? 20 1 1 B DC 14 1_555 C DG 3 1_555 0.470 -0.302 0.108 7.175 -14.621 3.010 13 B_DC6:DG-4_C B 6 ? C -4 ? 19 1 1 B DC 15 1_555 C DG 2 1_555 0.130 -0.249 0.176 -1.455 -3.421 -1.407 14 B_DC7:DG-5_C B 7 ? C -5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 16 1_555 B DC 2 1_555 C DG 15 1_555 0.120 -0.679 2.955 1.869 5.181 30.740 -2.135 0.092 2.808 9.675 -3.490 31.218 1 BB_DG-7DC-6:DG8DC9_CC B -7 ? C 9 ? B -6 ? C 8 ? 1 B DC 2 1_555 C DG 15 1_555 B DG 3 1_555 C DC 14 1_555 0.562 0.058 3.413 6.174 6.325 38.290 -0.713 -0.057 3.426 9.490 -9.263 39.259 2 BB_DC-6DG-5:DC7DG8_CC B -6 ? C 8 ? B -5 ? C 7 ? 1 B DG 3 1_555 C DC 14 1_555 B DT 4 1_555 C DA 13 1_555 -0.680 -0.433 3.277 -3.155 -0.917 32.362 -0.610 0.655 3.337 -1.639 5.642 32.524 3 BB_DG-5DT-4:DA6DC7_CC B -5 ? C 7 ? B -4 ? C 6 ? 1 B DT 4 1_555 C DA 13 1_555 B DC 5 1_555 C DG 12 1_555 0.817 0.368 3.302 3.168 -1.766 40.410 0.730 -0.819 3.336 -2.550 -4.575 40.566 4 BB_DT-4DC-3:DG5DA6_CC B -4 ? C 6 ? B -3 ? C 5 ? 1 B DC 5 1_555 C DG 12 1_555 B DC 6 1_555 C DG 11 1_555 -0.944 0.211 3.575 -4.625 -1.962 35.059 0.667 0.798 3.650 -3.236 7.629 35.406 5 BB_DC-3DC-2:DG4DG5_CC B -3 ? C 5 ? B -2 ? C 4 ? 1 B DC 6 1_555 C DG 11 1_555 B DA 7 1_555 C DT 10 1_555 1.399 1.128 3.020 3.716 -6.914 38.517 2.430 -1.677 2.900 -10.351 -5.562 39.279 6 BB_DC-2DA-1:DT3DG4_CC B -2 ? C 4 ? B -1 ? C 3 ? 1 B DG 9 1_555 C DC 8 1_555 B DT 10 1_555 C DA 7 1_555 -0.054 -0.392 3.195 -2.293 6.690 26.996 -2.352 -0.416 3.007 14.027 4.807 27.891 7 BB_DG1DT2:DA0DC1_CC B 1 ? C 1 ? B 2 ? C 0 ? 1 B DT 10 1_555 C DA 7 1_555 B DC 11 1_555 C DG 6 1_555 -0.017 -0.140 3.235 0.526 3.068 38.656 -0.581 0.089 3.215 4.625 -0.793 38.777 8 BB_DT2DC3:DG-1DA0_CC B 2 ? C 0 ? B 3 ? C -1 ? 1 B DC 11 1_555 C DG 6 1_555 B DT 12 1_555 C DA 5 1_555 -0.156 -0.225 3.573 -0.496 5.934 30.366 -1.670 0.188 3.469 11.193 0.936 30.930 9 BB_DC3DT4:DA-2DG-1_CC B 3 ? C -1 ? B 4 ? C -2 ? 1 B DT 12 1_555 C DA 5 1_555 B DA 13 1_555 C DT 4 1_555 0.270 0.769 3.055 -0.827 11.631 33.017 -0.431 -0.571 3.132 19.716 1.402 34.961 10 BB_DT4DA5:DT-3DA-2_CC B 4 ? C -2 ? B 5 ? C -3 ? 1 B DA 13 1_555 C DT 4 1_555 B DC 14 1_555 C DG 3 1_555 0.310 -0.962 3.330 -3.144 6.216 31.947 -2.772 -1.088 3.051 11.128 5.630 32.678 11 BB_DA5DC6:DG-4DT-3_CC B 5 ? C -3 ? B 6 ? C -4 ? 1 B DC 14 1_555 C DG 3 1_555 B DC 15 1_555 C DG 2 1_555 -0.230 -0.781 3.543 3.190 6.440 31.393 -2.625 1.017 3.283 11.710 -5.800 32.185 12 BB_DC6DC7:DG-5DG-4_CC B 6 ? C -4 ? B 7 ? C -5 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'P01 CA092584' 1 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'R35 CA220430' 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'DNA-free structure of AfOgg1 used for MR' # _atom_sites.entry_id 9O01 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.019226 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003549 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018925 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019022 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MG N O P S # loop_ #