HEADER HYDROLASE, LYASE/DNA 01-APR-25 9O01 TITLE CRYSTAL STRUCTURE OF AFOGG1-D140N MUTANT BOUND TO 8-OG DNA DUPLEX IN TITLE 2 AN INTERMEDIATE STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 8-OXOGUANINE DNA GLYCOSYLASE/AP LYASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.2.-,4.2.99.18; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(P*GP*CP*GP*TP*CP*CP*AP*(8OG) COMPND 9 P*GP*TP*CP*TP*AP*CP*CP*T)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)- COMPND 14 3'); COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 GENE: OGG, AF_0371; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS DNA-GLYCOSYLASE, AP-LYASE, HYDROLASE, LYASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.L.HUFFMAN,H.Y.H.TANG,A.SYED,A.S.ARVAI,C.D.MOL,J.A.TAINER REVDAT 1 15-APR-26 9O01 0 JRNL AUTH J.L.HUFFMAN,H.Y.H.TANG,A.SYED,A.S.ARVAI,C.D.MOL,J.A.TAINER JRNL TITL CRYSTAL STRUCTURE OF AFOGG1-D140N MUTANT BOUND TO 8-OG DNA JRNL TITL 2 DUPLEX IN AN INTERMEDIATE STATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.2 REMARK 3 NUMBER OF REFLECTIONS : 19513 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5200 - 5.6200 0.94 1480 140 0.2076 0.2768 REMARK 3 2 5.6100 - 4.4600 0.92 1401 149 0.1878 0.2011 REMARK 3 3 4.4600 - 3.8900 0.91 1389 155 0.1615 0.1961 REMARK 3 4 3.8900 - 3.5400 0.92 1419 155 0.1565 0.1985 REMARK 3 5 3.5400 - 3.2900 0.91 1400 155 0.1779 0.2094 REMARK 3 6 3.2900 - 3.0900 0.92 1404 159 0.1856 0.2406 REMARK 3 7 3.0900 - 2.9400 0.91 1390 154 0.2263 0.3052 REMARK 3 8 2.9400 - 2.8100 0.91 1410 166 0.2242 0.2843 REMARK 3 9 2.8100 - 2.7000 0.91 1385 156 0.2266 0.2074 REMARK 3 10 2.7000 - 2.6100 0.90 1381 146 0.2293 0.2614 REMARK 3 11 2.6100 - 2.5300 0.90 1394 159 0.2409 0.2841 REMARK 3 12 2.5300 - 2.4500 0.89 1372 142 0.2513 0.3070 REMARK 3 13 2.4500 - 2.3900 0.89 1356 145 0.2729 0.3617 REMARK 3 14 2.3900 - 2.3300 0.89 1388 161 0.2878 0.3265 REMARK 3 15 2.3300 - 2.2800 0.88 1357 153 0.2942 0.3198 REMARK 3 16 2.2800 - 2.2300 0.86 1325 126 0.3163 0.3398 REMARK 3 17 2.2300 - 2.1800 0.87 1305 171 0.3231 0.3928 REMARK 3 18 2.1800 - 2.1400 0.84 1314 134 0.3659 0.3178 REMARK 3 19 2.1400 - 2.1100 0.83 1262 149 0.3627 0.3494 REMARK 3 20 2.1100 - 2.0700 0.78 1189 124 0.3791 0.4304 REMARK 3 21 2.0700 - 2.0400 0.72 1102 119 0.3993 0.3904 REMARK 3 22 2.0400 - 2.0100 0.49 752 81 0.4329 0.4730 REMARK 3 23 2.0000 - 1.9800 0.57 876 98 0.4359 0.4960 REMARK 3 24 1.9800 - 1.9500 0.18 292 25 0.5359 0.5831 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 NULL REMARK 3 ANGLE : 0.712 NULL REMARK 3 CHIRALITY : 0.042 362 REMARK 3 PLANARITY : 0.005 304 REMARK 3 DIHEDRAL : 24.877 522 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9O01 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-25. REMARK 100 THE DEPOSITION ID IS D_1000292504. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11699 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20265 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30% PEG4000, 100 MM MES, PH 6.5, 5% REMARK 280 POTASSIUM PERMANGANATE (SATURATED), VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.41950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A -4 REMARK 465 SER A -3 REMARK 465 GLU A -2 REMARK 465 PHE A -1 REMARK 465 GLY A 0 REMARK 465 DT B 8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 GLU A 153 CG CD OE1 OE2 REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 180 O HOH A 301 1.30 REMARK 500 OD1 ASP A 185 H22 8OG B 0 1.50 REMARK 500 OD2 ASP A 185 H1 8OG B 0 1.55 REMARK 500 HG1 THR A 37 O HOH A 304 1.58 REMARK 500 OG SER A 180 O HOH A 301 1.84 REMARK 500 O HOH B 103 O HOH B 112 1.87 REMARK 500 OE1 GLU A 123 O HOH A 302 2.10 REMARK 500 OP2 DC B -6 O HOH B 101 2.14 REMARK 500 O HOH A 312 O HOH A 337 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE ARG A 149 H61 DA C -6 2555 1.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C -6 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC C 1 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC C 2 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT C 3 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 31 57.05 -91.91 REMARK 500 ARG A 141 -72.50 -32.31 REMARK 500 LEU A 197 -127.44 -102.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 114 O REMARK 620 2 ILE A 116 O 92.5 REMARK 620 3 LEU A 119 O 99.9 95.6 REMARK 620 4 DC B 3 OP1 165.3 91.0 94.0 REMARK 620 5 HOH B 108 O 81.6 171.4 79.3 96.3 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9O00 RELATED DB: PDB DBREF 9O01 A 2 198 UNP O29876 OGG1_ARCFU 2 198 DBREF 9O01 B -7 8 PDB 9O01 9O01 -7 8 DBREF 9O01 C -6 9 PDB 9O01 9O01 -6 9 SEQADV 9O01 ILE A -4 UNP O29876 EXPRESSION TAG SEQADV 9O01 SER A -3 UNP O29876 EXPRESSION TAG SEQADV 9O01 GLU A -2 UNP O29876 EXPRESSION TAG SEQADV 9O01 PHE A -1 UNP O29876 EXPRESSION TAG SEQADV 9O01 GLY A 0 UNP O29876 EXPRESSION TAG SEQADV 9O01 SER A 1 UNP O29876 EXPRESSION TAG SEQADV 9O01 ASN A 140 UNP O29876 ASP 140 ENGINEERED MUTATION SEQRES 1 A 203 ILE SER GLU PHE GLY SER ILE GLU LYS ALA ILE SER ARG SEQRES 2 A 203 ARG ILE LYS GLU PHE ARG GLN LEU GLY GLU LYS GLY GLU SEQRES 3 A 203 VAL GLU PHE ASP PHE ARG PRO PHE LEU ASP PHE SER VAL SEQRES 4 A 203 LYS ALA THR ILE ARG THR GLU LEU ALA PHE CYS ILE SER SEQRES 5 A 203 THR ALA ASN SER SER ALA THR ALA GLY LEU LYS PHE GLN SEQRES 6 A 203 ARG LEU LEU GLY GLN GLY VAL GLY VAL LYS GLU ALA LEU SEQRES 7 A 203 THR LEU ALA GLY VAL ARG PHE HIS ASN ARG LYS ALA GLU SEQRES 8 A 203 TYR ILE ARG GLU ALA PHE LYS SER PHE LYS LEU VAL GLU SEQRES 9 A 203 LYS ALA LEU GLU ALA GLU SER SER LYS ALA ARG GLU ILE SEQRES 10 A 203 LEU LEU LYS ILE LYS GLY LEU GLY MET LYS GLU ALA SER SEQRES 11 A 203 HIS PHE LEU ARG ASN VAL GLY ARG GLU ASP VAL ALA ILE SEQRES 12 A 203 ILE ASN ARG HIS ILE LEU ARG TRP LEU GLU ARG GLN GLY SEQRES 13 A 203 TYR GLU VAL PRO GLY THR MET THR ALA LYS LYS TYR LEU SEQRES 14 A 203 GLU VAL GLU LYS ILE LEU MET GLU ILE SER GLU GLU ARG SEQRES 15 A 203 GLY GLU SER LEU ALA GLU MET ASP LEU ARG ILE TRP ALA SEQRES 16 A 203 GLU MET THR GLY LYS VAL LEU LYS SEQRES 1 B 16 DG DC DG DT DC DC DA 8OG DG DT DC DT DA SEQRES 2 B 16 DC DC DT SEQRES 1 C 16 DA DG DG DT DA DG DA DC DC DT DG DG DA SEQRES 2 C 16 DC DG DC HET 8OG B 0 34 HET MG A 201 1 HETNAM 8OG 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN 8OG 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE FORMUL 2 8OG C10 H14 N5 O8 P FORMUL 4 MG MG 2+ FORMUL 5 HOH *63(H2 O) HELIX 1 AA1 SER A 1 GLY A 20 1 20 HELIX 2 AA2 ILE A 38 THR A 48 1 11 HELIX 3 AA3 SER A 52 GLN A 65 1 14 HELIX 4 AA4 GLY A 68 GLY A 77 1 10 HELIX 5 AA5 PHE A 80 SER A 94 1 15 HELIX 6 AA6 SER A 94 LEU A 102 1 9 HELIX 7 AA7 GLU A 105 LEU A 114 1 10 HELIX 8 AA8 GLY A 120 VAL A 131 1 12 HELIX 9 AA9 ASN A 140 GLY A 151 1 12 HELIX 10 AB1 THR A 159 GLY A 178 1 20 HELIX 11 AB2 SER A 180 GLY A 194 1 15 SHEET 1 AA1 2 GLU A 21 ASP A 25 0 SHEET 2 AA1 2 SER A 33 THR A 37 -1 O ALA A 36 N VAL A 22 LINK O3' DA B -1 P 8OG B 0 1555 1555 1.59 LINK O3' 8OG B 0 P DG B 1 1555 1555 1.59 LINK O LEU A 114 MG MG A 201 1555 1555 2.44 LINK O ILE A 116 MG MG A 201 1555 1555 2.38 LINK O LEU A 119 MG MG A 201 1555 1555 2.44 LINK MG MG A 201 OP1 DC B 3 1555 1555 2.21 LINK MG MG A 201 O HOH B 108 1555 1555 2.41 CISPEP 1 ARG A 27 PRO A 28 0 4.17 CRYST1 52.013 52.839 53.459 90.00 100.46 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019226 0.000000 0.003549 0.00000 SCALE2 0.000000 0.018925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019022 0.00000 CONECT 1840 4238 CONECT 1881 4238 CONECT 1929 4238 CONECT 3450 3474 CONECT 3474 3450 3475 3476 3477 CONECT 3475 3474 CONECT 3476 3474 CONECT 3477 3474 3478 CONECT 3478 3477 3479 3497 3498 CONECT 3479 3478 3480 3481 3499 CONECT 3480 3479 3484 CONECT 3481 3479 3482 3483 3500 CONECT 3482 3481 3508 CONECT 3483 3481 3484 3501 3502 CONECT 3484 3480 3483 3485 3503 CONECT 3485 3484 3486 3495 CONECT 3486 3485 3487 3496 CONECT 3487 3486 3488 3504 CONECT 3488 3487 3489 3495 CONECT 3489 3488 3490 3491 CONECT 3490 3489 CONECT 3491 3489 3492 3505 CONECT 3492 3491 3493 3494 CONECT 3493 3492 3506 3507 CONECT 3494 3492 3495 CONECT 3495 3485 3488 3494 CONECT 3496 3486 CONECT 3497 3478 CONECT 3498 3478 CONECT 3499 3479 CONECT 3500 3481 CONECT 3501 3483 CONECT 3502 3483 CONECT 3503 3484 CONECT 3504 3487 CONECT 3505 3491 CONECT 3506 3493 CONECT 3507 3493 CONECT 3508 3482 CONECT 3574 4238 CONECT 4238 1840 1881 1929 3574 CONECT 4238 4287 CONECT 4287 4238 MASTER 328 0 2 11 2 0 0 6 2268 3 43 20 END