data_9O03 # _entry.id 9O03 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9O03 pdb_00009o03 10.2210/pdb9o03/pdb WWPDB D_1000292509 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-15 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9O03 _pdbx_database_status.recvd_initial_deposition_date 2025-04-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 9O00 unspecified PDB . 9O01 unspecified PDB . 9O02 unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email JTainer@mdanderson.org _pdbx_contact_author.name_first John _pdbx_contact_author.name_last Tainer _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1659-2429 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Arvai, A.S.' 1 0000-0002-5376-3728 'Syed, A.' 2 0000-0001-7942-3900 'Huffman, J.L.' 3 ? 'Mol, C.D.' 4 ? 'Hitomi, K.' 5 ? 'Tainer, J.A.' 6 0000-0003-1659-2429 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of AfOgg1:8OG-DNA duplex in a product-bound state' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arvai, A.S.' 1 0000-0002-5376-3728 primary 'Syed, A.' 2 0000-0001-7942-3900 primary 'Huffman, J.L.' 3 ? primary 'Mol, C.D.' 4 ? primary 'Hitomi, K.' 5 ? primary 'Tainer, J.A.' 6 0000-0003-1659-2429 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '8-oxoguanine DNA glycosylase/AP lyase' 23402.398 1 3.2.2.-,4.2.99.18 ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*AP*GP*TP*CP(PUA))-3') ; 1698.115 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*AP*CP*CP*TP*GP*CP*A)-3') ; 2082.400 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*TP*GP*CP*AP*GP*GP*TP*CP*GP*AP*CP*TP*CP*TP*A)-3') ; 4584.984 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 6 water nat water 18.015 80 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;ISEFGSIEKAISRRIKEFRQLGEKGEVEFDFRPFLDFSVKATIRTELAFCISTANSSATAGLKFQRLLGQGVGVKEALTL AGVRFHNRKAEYIREAFKSFKLVEKALEAESSKAREILLKIKGLG(MSE)KEASHFLRNVGREDVAIIDRHILRWLERQG YEVPGT(MSE)TAKKYLEVEKIL(MSE)EISEERGESLAE(MSE)DLRIWAE(MSE)TGKVLK ; ;ISEFGSIEKAISRRIKEFRQLGEKGEVEFDFRPFLDFSVKATIRTELAFCISTANSSATAGLKFQRLLGQGVGVKEALTL AGVRFHNRKAEYIREAFKSFKLVEKALEAESSKAREILLKIKGLGMKEASHFLRNVGREDVAIIDRHILRWLERQGYEVP GTMTAKKYLEVEKILMEISEERGESLAEMDLRIWAEMTGKVLK ; A ? 2 polydeoxyribonucleotide no yes '(DG)(DA)(DG)(DT)(DC)(A1C6T)' GAGTCX D ? 3 polydeoxyribonucleotide no no '(DA)(DC)(DC)(DT)(DG)(DC)(DA)' ACCTGCA B ? 4 polydeoxyribonucleotide no no '(DT)(DG)(DC)(DA)(DG)(DG)(DT)(DC)(DG)(DA)(DC)(DT)(DC)(DT)(DA)' TGCAGGTCGACTCTA C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'SULFATE ION' SO4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 SER n 1 3 GLU n 1 4 PHE n 1 5 GLY n 1 6 SER n 1 7 ILE n 1 8 GLU n 1 9 LYS n 1 10 ALA n 1 11 ILE n 1 12 SER n 1 13 ARG n 1 14 ARG n 1 15 ILE n 1 16 LYS n 1 17 GLU n 1 18 PHE n 1 19 ARG n 1 20 GLN n 1 21 LEU n 1 22 GLY n 1 23 GLU n 1 24 LYS n 1 25 GLY n 1 26 GLU n 1 27 VAL n 1 28 GLU n 1 29 PHE n 1 30 ASP n 1 31 PHE n 1 32 ARG n 1 33 PRO n 1 34 PHE n 1 35 LEU n 1 36 ASP n 1 37 PHE n 1 38 SER n 1 39 VAL n 1 40 LYS n 1 41 ALA n 1 42 THR n 1 43 ILE n 1 44 ARG n 1 45 THR n 1 46 GLU n 1 47 LEU n 1 48 ALA n 1 49 PHE n 1 50 CYS n 1 51 ILE n 1 52 SER n 1 53 THR n 1 54 ALA n 1 55 ASN n 1 56 SER n 1 57 SER n 1 58 ALA n 1 59 THR n 1 60 ALA n 1 61 GLY n 1 62 LEU n 1 63 LYS n 1 64 PHE n 1 65 GLN n 1 66 ARG n 1 67 LEU n 1 68 LEU n 1 69 GLY n 1 70 GLN n 1 71 GLY n 1 72 VAL n 1 73 GLY n 1 74 VAL n 1 75 LYS n 1 76 GLU n 1 77 ALA n 1 78 LEU n 1 79 THR n 1 80 LEU n 1 81 ALA n 1 82 GLY n 1 83 VAL n 1 84 ARG n 1 85 PHE n 1 86 HIS n 1 87 ASN n 1 88 ARG n 1 89 LYS n 1 90 ALA n 1 91 GLU n 1 92 TYR n 1 93 ILE n 1 94 ARG n 1 95 GLU n 1 96 ALA n 1 97 PHE n 1 98 LYS n 1 99 SER n 1 100 PHE n 1 101 LYS n 1 102 LEU n 1 103 VAL n 1 104 GLU n 1 105 LYS n 1 106 ALA n 1 107 LEU n 1 108 GLU n 1 109 ALA n 1 110 GLU n 1 111 SER n 1 112 SER n 1 113 LYS n 1 114 ALA n 1 115 ARG n 1 116 GLU n 1 117 ILE n 1 118 LEU n 1 119 LEU n 1 120 LYS n 1 121 ILE n 1 122 LYS n 1 123 GLY n 1 124 LEU n 1 125 GLY n 1 126 MSE n 1 127 LYS n 1 128 GLU n 1 129 ALA n 1 130 SER n 1 131 HIS n 1 132 PHE n 1 133 LEU n 1 134 ARG n 1 135 ASN n 1 136 VAL n 1 137 GLY n 1 138 ARG n 1 139 GLU n 1 140 ASP n 1 141 VAL n 1 142 ALA n 1 143 ILE n 1 144 ILE n 1 145 ASP n 1 146 ARG n 1 147 HIS n 1 148 ILE n 1 149 LEU n 1 150 ARG n 1 151 TRP n 1 152 LEU n 1 153 GLU n 1 154 ARG n 1 155 GLN n 1 156 GLY n 1 157 TYR n 1 158 GLU n 1 159 VAL n 1 160 PRO n 1 161 GLY n 1 162 THR n 1 163 MSE n 1 164 THR n 1 165 ALA n 1 166 LYS n 1 167 LYS n 1 168 TYR n 1 169 LEU n 1 170 GLU n 1 171 VAL n 1 172 GLU n 1 173 LYS n 1 174 ILE n 1 175 LEU n 1 176 MSE n 1 177 GLU n 1 178 ILE n 1 179 SER n 1 180 GLU n 1 181 GLU n 1 182 ARG n 1 183 GLY n 1 184 GLU n 1 185 SER n 1 186 LEU n 1 187 ALA n 1 188 GLU n 1 189 MSE n 1 190 ASP n 1 191 LEU n 1 192 ARG n 1 193 ILE n 1 194 TRP n 1 195 ALA n 1 196 GLU n 1 197 MSE n 1 198 THR n 1 199 GLY n 1 200 LYS n 1 201 VAL n 1 202 LEU n 1 203 LYS n 2 1 DG n 2 2 DA n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 A1C6T n 3 1 DA n 3 2 DC n 3 3 DC n 3 4 DT n 3 5 DG n 3 6 DC n 3 7 DA n 4 1 DT n 4 2 DG n 4 3 DC n 4 4 DA n 4 5 DG n 4 6 DG n 4 7 DT n 4 8 DC n 4 9 DG n 4 10 DA n 4 11 DC n 4 12 DT n 4 13 DC n 4 14 DT n 4 15 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 203 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ogg, AF_0371' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2234 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 6 'synthetic construct' ? 32630 ? 3 1 sample 1 7 'synthetic construct' ? 32630 ? 4 1 sample 1 15 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1C6T non-polymer . '(2R,3E)-2-hydroxy-5-oxopent-3-en-1-yl dihydrogen phosphate' ? 'C5 H9 O6 P' 196.095 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 GLU 3 -2 -2 GLU GLU A . n A 1 4 PHE 4 -1 -1 PHE PHE A . n A 1 5 GLY 5 0 0 GLY GLY A . n A 1 6 SER 6 1 1 SER SER A . n A 1 7 ILE 7 2 2 ILE ILE A . n A 1 8 GLU 8 3 3 GLU GLU A . n A 1 9 LYS 9 4 4 LYS LYS A . n A 1 10 ALA 10 5 5 ALA ALA A . n A 1 11 ILE 11 6 6 ILE ILE A . n A 1 12 SER 12 7 7 SER SER A . n A 1 13 ARG 13 8 8 ARG ARG A . n A 1 14 ARG 14 9 9 ARG ARG A . n A 1 15 ILE 15 10 10 ILE ILE A . n A 1 16 LYS 16 11 11 LYS LYS A . n A 1 17 GLU 17 12 12 GLU GLU A . n A 1 18 PHE 18 13 13 PHE PHE A . n A 1 19 ARG 19 14 14 ARG ARG A . n A 1 20 GLN 20 15 15 GLN GLN A . n A 1 21 LEU 21 16 16 LEU LEU A . n A 1 22 GLY 22 17 17 GLY GLY A . n A 1 23 GLU 23 18 18 GLU GLU A . n A 1 24 LYS 24 19 19 LYS LYS A . n A 1 25 GLY 25 20 20 GLY GLY A . n A 1 26 GLU 26 21 21 GLU GLU A . n A 1 27 VAL 27 22 22 VAL VAL A . n A 1 28 GLU 28 23 23 GLU GLU A . n A 1 29 PHE 29 24 24 PHE PHE A . n A 1 30 ASP 30 25 25 ASP ASP A . n A 1 31 PHE 31 26 26 PHE PHE A . n A 1 32 ARG 32 27 27 ARG ARG A . n A 1 33 PRO 33 28 28 PRO PRO A . n A 1 34 PHE 34 29 29 PHE PHE A . n A 1 35 LEU 35 30 30 LEU LEU A . n A 1 36 ASP 36 31 31 ASP ASP A . n A 1 37 PHE 37 32 32 PHE PHE A . n A 1 38 SER 38 33 33 SER SER A . n A 1 39 VAL 39 34 34 VAL VAL A . n A 1 40 LYS 40 35 35 LYS LYS A . n A 1 41 ALA 41 36 36 ALA ALA A . n A 1 42 THR 42 37 37 THR THR A . n A 1 43 ILE 43 38 38 ILE ILE A . n A 1 44 ARG 44 39 39 ARG ARG A . n A 1 45 THR 45 40 40 THR THR A . n A 1 46 GLU 46 41 41 GLU GLU A . n A 1 47 LEU 47 42 42 LEU LEU A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 PHE 49 44 44 PHE PHE A . n A 1 50 CYS 50 45 45 CYS CYS A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 SER 52 47 47 SER SER A . n A 1 53 THR 53 48 48 THR THR A . n A 1 54 ALA 54 49 49 ALA ALA A . n A 1 55 ASN 55 50 50 ASN ASN A . n A 1 56 SER 56 51 51 SER SER A . n A 1 57 SER 57 52 52 SER SER A . n A 1 58 ALA 58 53 53 ALA ALA A . n A 1 59 THR 59 54 54 THR THR A . n A 1 60 ALA 60 55 55 ALA ALA A . n A 1 61 GLY 61 56 56 GLY GLY A . n A 1 62 LEU 62 57 57 LEU LEU A . n A 1 63 LYS 63 58 58 LYS LYS A . n A 1 64 PHE 64 59 59 PHE PHE A . n A 1 65 GLN 65 60 60 GLN GLN A . n A 1 66 ARG 66 61 61 ARG ARG A . n A 1 67 LEU 67 62 62 LEU LEU A . n A 1 68 LEU 68 63 63 LEU LEU A . n A 1 69 GLY 69 64 64 GLY GLY A . n A 1 70 GLN 70 65 65 GLN GLN A . n A 1 71 GLY 71 66 66 GLY GLY A . n A 1 72 VAL 72 67 67 VAL VAL A . n A 1 73 GLY 73 68 68 GLY GLY A . n A 1 74 VAL 74 69 69 VAL VAL A . n A 1 75 LYS 75 70 70 LYS LYS A . n A 1 76 GLU 76 71 71 GLU GLU A . n A 1 77 ALA 77 72 72 ALA ALA A . n A 1 78 LEU 78 73 73 LEU LEU A . n A 1 79 THR 79 74 74 THR THR A . n A 1 80 LEU 80 75 75 LEU LEU A . n A 1 81 ALA 81 76 76 ALA ALA A . n A 1 82 GLY 82 77 77 GLY GLY A . n A 1 83 VAL 83 78 78 VAL VAL A . n A 1 84 ARG 84 79 79 ARG ARG A . n A 1 85 PHE 85 80 80 PHE PHE A . n A 1 86 HIS 86 81 81 HIS HIS A . n A 1 87 ASN 87 82 82 ASN ASN A . n A 1 88 ARG 88 83 83 ARG ARG A . n A 1 89 LYS 89 84 84 LYS LYS A . n A 1 90 ALA 90 85 85 ALA ALA A . n A 1 91 GLU 91 86 86 GLU GLU A . n A 1 92 TYR 92 87 87 TYR TYR A . n A 1 93 ILE 93 88 88 ILE ILE A . n A 1 94 ARG 94 89 89 ARG ARG A . n A 1 95 GLU 95 90 90 GLU GLU A . n A 1 96 ALA 96 91 91 ALA ALA A . n A 1 97 PHE 97 92 92 PHE PHE A . n A 1 98 LYS 98 93 93 LYS LYS A . n A 1 99 SER 99 94 94 SER SER A . n A 1 100 PHE 100 95 95 PHE PHE A . n A 1 101 LYS 101 96 96 LYS LYS A . n A 1 102 LEU 102 97 97 LEU LEU A . n A 1 103 VAL 103 98 98 VAL VAL A . n A 1 104 GLU 104 99 99 GLU GLU A . n A 1 105 LYS 105 100 100 LYS LYS A . n A 1 106 ALA 106 101 101 ALA ALA A . n A 1 107 LEU 107 102 102 LEU LEU A . n A 1 108 GLU 108 103 103 GLU GLU A . n A 1 109 ALA 109 104 104 ALA ALA A . n A 1 110 GLU 110 105 105 GLU GLU A . n A 1 111 SER 111 106 106 SER SER A . n A 1 112 SER 112 107 107 SER SER A . n A 1 113 LYS 113 108 108 LYS LYS A . n A 1 114 ALA 114 109 109 ALA ALA A . n A 1 115 ARG 115 110 110 ARG ARG A . n A 1 116 GLU 116 111 111 GLU GLU A . n A 1 117 ILE 117 112 112 ILE ILE A . n A 1 118 LEU 118 113 113 LEU LEU A . n A 1 119 LEU 119 114 114 LEU LEU A . n A 1 120 LYS 120 115 115 LYS LYS A . n A 1 121 ILE 121 116 116 ILE ILE A . n A 1 122 LYS 122 117 117 LYS LYS A . n A 1 123 GLY 123 118 118 GLY GLY A . n A 1 124 LEU 124 119 119 LEU LEU A . n A 1 125 GLY 125 120 120 GLY GLY A . n A 1 126 MSE 126 121 121 MSE MSE A . n A 1 127 LYS 127 122 122 LYS LYS A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 ALA 129 124 124 ALA ALA A . n A 1 130 SER 130 125 125 SER SER A . n A 1 131 HIS 131 126 126 HIS HIS A . n A 1 132 PHE 132 127 127 PHE PHE A . n A 1 133 LEU 133 128 128 LEU LEU A . n A 1 134 ARG 134 129 129 ARG ARG A . n A 1 135 ASN 135 130 130 ASN ASN A . n A 1 136 VAL 136 131 131 VAL VAL A . n A 1 137 GLY 137 132 132 GLY GLY A . n A 1 138 ARG 138 133 133 ARG ARG A . n A 1 139 GLU 139 134 134 GLU GLU A . n A 1 140 ASP 140 135 135 ASP ASP A . n A 1 141 VAL 141 136 136 VAL VAL A . n A 1 142 ALA 142 137 137 ALA ALA A . n A 1 143 ILE 143 138 138 ILE ILE A . n A 1 144 ILE 144 139 139 ILE ILE A . n A 1 145 ASP 145 140 140 ASP ASP A . n A 1 146 ARG 146 141 141 ARG ARG A . n A 1 147 HIS 147 142 142 HIS HIS A . n A 1 148 ILE 148 143 143 ILE ILE A . n A 1 149 LEU 149 144 144 LEU LEU A . n A 1 150 ARG 150 145 145 ARG ARG A . n A 1 151 TRP 151 146 146 TRP TRP A . n A 1 152 LEU 152 147 147 LEU LEU A . n A 1 153 GLU 153 148 148 GLU GLU A . n A 1 154 ARG 154 149 149 ARG ARG A . n A 1 155 GLN 155 150 150 GLN GLN A . n A 1 156 GLY 156 151 151 GLY GLY A . n A 1 157 TYR 157 152 152 TYR TYR A . n A 1 158 GLU 158 153 153 GLU GLU A . n A 1 159 VAL 159 154 154 VAL VAL A . n A 1 160 PRO 160 155 155 PRO PRO A . n A 1 161 GLY 161 156 156 GLY GLY A . n A 1 162 THR 162 157 157 THR THR A . n A 1 163 MSE 163 158 158 MSE MSE A . n A 1 164 THR 164 159 159 THR THR A . n A 1 165 ALA 165 160 160 ALA ALA A . n A 1 166 LYS 166 161 161 LYS LYS A . n A 1 167 LYS 167 162 162 LYS LYS A . n A 1 168 TYR 168 163 163 TYR TYR A . n A 1 169 LEU 169 164 164 LEU LEU A . n A 1 170 GLU 170 165 165 GLU GLU A . n A 1 171 VAL 171 166 166 VAL VAL A . n A 1 172 GLU 172 167 167 GLU GLU A . n A 1 173 LYS 173 168 168 LYS LYS A . n A 1 174 ILE 174 169 169 ILE ILE A . n A 1 175 LEU 175 170 170 LEU LEU A . n A 1 176 MSE 176 171 171 MSE MSE A . n A 1 177 GLU 177 172 172 GLU GLU A . n A 1 178 ILE 178 173 173 ILE ILE A . n A 1 179 SER 179 174 174 SER SER A . n A 1 180 GLU 180 175 175 GLU GLU A . n A 1 181 GLU 181 176 176 GLU GLU A . n A 1 182 ARG 182 177 177 ARG ARG A . n A 1 183 GLY 183 178 178 GLY GLY A . n A 1 184 GLU 184 179 179 GLU GLU A . n A 1 185 SER 185 180 180 SER SER A . n A 1 186 LEU 186 181 181 LEU LEU A . n A 1 187 ALA 187 182 182 ALA ALA A . n A 1 188 GLU 188 183 183 GLU GLU A . n A 1 189 MSE 189 184 184 MSE MSE A . n A 1 190 ASP 190 185 185 ASP ASP A . n A 1 191 LEU 191 186 186 LEU LEU A . n A 1 192 ARG 192 187 187 ARG ARG A . n A 1 193 ILE 193 188 188 ILE ILE A . n A 1 194 TRP 194 189 189 TRP TRP A . n A 1 195 ALA 195 190 190 ALA ALA A . n A 1 196 GLU 196 191 191 GLU GLU A . n A 1 197 MSE 197 192 192 MSE MSE A . n A 1 198 THR 198 193 193 THR THR A . n A 1 199 GLY 199 194 194 GLY GLY A . n A 1 200 LYS 200 195 195 LYS LYS A . n A 1 201 VAL 201 196 196 VAL VAL A . n A 1 202 LEU 202 197 197 LEU LEU A . n A 1 203 LYS 203 198 198 LYS LYS A . n B 2 1 DG 1 303 303 DG DG D . n B 2 2 DA 2 304 304 DA DA D . n B 2 3 DG 3 305 305 DG DG D . n B 2 4 DT 4 306 306 DT DT D . n B 2 5 DC 5 307 307 DC DC D . n B 2 6 A1C6T 6 308 308 A1C6T PUA D . n C 3 1 DA 1 309 309 DA DA B . n C 3 2 DC 2 310 310 DC DC B . n C 3 3 DC 3 311 311 DC DC B . n C 3 4 DT 4 312 312 DT DT B . n C 3 5 DG 5 313 313 DG DG B . n C 3 6 DC 6 314 314 DC DC B . n C 3 7 DA 7 315 315 DA DA B . n D 4 1 DT 1 321 321 DT DT C . n D 4 2 DG 2 322 322 DG DG C . n D 4 3 DC 3 323 323 DC DC C . n D 4 4 DA 4 324 324 DA DA C . n D 4 5 DG 5 325 325 DG DG C . n D 4 6 DG 6 326 326 DG DG C . n D 4 7 DT 7 327 327 DT DT C . n D 4 8 DC 8 328 328 DC DC C . n D 4 9 DG 9 329 329 DG DG C . n D 4 10 DA 10 330 330 DA DA C . n D 4 11 DC 11 331 331 DC DC C . n D 4 12 DT 12 332 332 DT DT C . n D 4 13 DC 13 333 333 DC DC C . n D 4 14 DT 14 334 334 DT DT C . n D 4 15 DA 15 335 ? ? ? C . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1C6T _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1C6T _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SO4 1 201 1 SO4 SO4 A . F 5 SO4 1 202 2 SO4 SO4 A . G 6 HOH 1 301 4 HOH HOH A . G 6 HOH 2 302 535 HOH HOH A . G 6 HOH 3 303 43 HOH HOH A . G 6 HOH 4 304 310 HOH HOH A . G 6 HOH 5 305 35 HOH HOH A . G 6 HOH 6 306 73 HOH HOH A . G 6 HOH 7 307 28 HOH HOH A . G 6 HOH 8 308 89 HOH HOH A . G 6 HOH 9 309 95 HOH HOH A . G 6 HOH 10 310 135 HOH HOH A . G 6 HOH 11 311 71 HOH HOH A . G 6 HOH 12 312 428 HOH HOH A . G 6 HOH 13 313 2 HOH HOH A . G 6 HOH 14 314 72 HOH HOH A . G 6 HOH 15 315 56 HOH HOH A . G 6 HOH 16 316 354 HOH HOH A . G 6 HOH 17 317 584 HOH HOH A . G 6 HOH 18 318 30 HOH HOH A . G 6 HOH 19 319 12 HOH HOH A . G 6 HOH 20 320 9 HOH HOH A . G 6 HOH 21 321 18 HOH HOH A . G 6 HOH 22 322 83 HOH HOH A . G 6 HOH 23 323 3 HOH HOH A . G 6 HOH 24 324 25 HOH HOH A . G 6 HOH 25 325 11 HOH HOH A . G 6 HOH 26 326 17 HOH HOH A . G 6 HOH 27 327 21 HOH HOH A . G 6 HOH 28 328 162 HOH HOH A . G 6 HOH 29 329 146 HOH HOH A . G 6 HOH 30 330 286 HOH HOH A . G 6 HOH 31 331 16 HOH HOH A . G 6 HOH 32 332 639 HOH HOH A . G 6 HOH 33 333 55 HOH HOH A . G 6 HOH 34 334 348 HOH HOH A . G 6 HOH 35 335 24 HOH HOH A . G 6 HOH 36 336 382 HOH HOH A . G 6 HOH 37 337 193 HOH HOH A . G 6 HOH 38 338 115 HOH HOH A . G 6 HOH 39 339 52 HOH HOH A . G 6 HOH 40 340 425 HOH HOH A . G 6 HOH 41 341 63 HOH HOH A . G 6 HOH 42 342 87 HOH HOH A . G 6 HOH 43 343 579 HOH HOH A . G 6 HOH 44 344 5 HOH HOH A . G 6 HOH 45 345 39 HOH HOH A . G 6 HOH 46 346 585 HOH HOH A . G 6 HOH 47 347 84 HOH HOH A . G 6 HOH 48 348 88 HOH HOH A . G 6 HOH 49 349 283 HOH HOH A . G 6 HOH 50 350 38 HOH HOH A . G 6 HOH 51 351 50 HOH HOH A . G 6 HOH 52 352 221 HOH HOH A . G 6 HOH 53 353 81 HOH HOH A . G 6 HOH 54 354 47 HOH HOH A . G 6 HOH 55 355 532 HOH HOH A . G 6 HOH 56 356 45 HOH HOH A . G 6 HOH 57 357 41 HOH HOH A . G 6 HOH 58 358 113 HOH HOH A . G 6 HOH 59 359 496 HOH HOH A . G 6 HOH 60 360 497 HOH HOH A . G 6 HOH 61 361 615 HOH HOH A . G 6 HOH 62 362 46 HOH HOH A . G 6 HOH 63 363 657 HOH HOH A . G 6 HOH 64 364 57 HOH HOH A . G 6 HOH 65 365 14 HOH HOH A . H 6 HOH 1 401 1 HOH HOH B . H 6 HOH 2 402 215 HOH HOH B . H 6 HOH 3 403 8 HOH HOH B . H 6 HOH 4 404 6 HOH HOH B . H 6 HOH 5 405 7 HOH HOH B . H 6 HOH 6 406 75 HOH HOH B . H 6 HOH 7 407 196 HOH HOH B . H 6 HOH 8 408 10 HOH HOH B . I 6 HOH 1 401 503 HOH HOH C . I 6 HOH 2 402 358 HOH HOH C . I 6 HOH 3 403 127 HOH HOH C . I 6 HOH 4 404 638 HOH HOH C . I 6 HOH 5 405 517 HOH HOH C . I 6 HOH 6 406 111 HOH HOH C . I 6 HOH 7 407 26 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.21_5207: ???)' ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 104.29 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9O03 _cell.details ? _cell.formula_units_Z ? _cell.length_a 55.813 _cell.length_a_esd ? _cell.length_b 44.815 _cell.length_b_esd ? _cell.length_c 59.026 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9O03 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9O03 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20-30% PEG4000, 100 mM MES, pH 6.5, 5% potassium permanganate (saturated)' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2001-01-25 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 30.54 _reflns.entry_id 9O03 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 35.3 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19200 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.3 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.05 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1402 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.466 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9O03 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 35.20 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16434 _refine.ls_number_reflns_R_free 819 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 84.95 _refine.ls_percent_reflns_R_free 4.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2203 _refine.ls_R_factor_R_free 0.2529 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2186 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.03 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.00 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 35.57 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.32 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 35.20 _refine_hist.number_atoms_solvent 80 _refine_hist.number_atoms_total 2244 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1614 _refine_hist.pdbx_number_atoms_nucleic_acid 540 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2279 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.525 ? 3165 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 21.085 ? 930 ? f_dihedral_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.035 ? 348 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 313 ? f_plane_restr ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.00 2.13 . . 124 2211 73.00 . . . . 0.4459 . . . . . . . . . . . . . . . 0.4582 'X-RAY DIFFRACTION' 2.13 2.29 . . 125 2357 78.00 . . . . 0.3456 . . . . . . . . . . . . . . . 0.4089 'X-RAY DIFFRACTION' 2.29 2.52 . . 116 2481 81.00 . . . . 0.2857 . . . . . . . . . . . . . . . 0.2993 'X-RAY DIFFRACTION' 2.52 2.88 . . 133 2613 86.00 . . . . 0.2524 . . . . . . . . . . . . . . . 0.3207 'X-RAY DIFFRACTION' 2.88 3.63 . . 155 2912 95.00 . . . . 0.2055 . . . . . . . . . . . . . . . 0.2479 'X-RAY DIFFRACTION' 3.63 35.20 . . 166 3041 97.00 . . . . 0.1569 . . . . . . . . . . . . . . . 0.1809 # _struct.entry_id 9O03 _struct.title 'Crystal structure of AfOgg1:8OG-DNA duplex in a product-bound state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9O03 _struct_keywords.text 'DNA-glycosylase, AP-lyase, HYDROLASE, LYASE-DNA complex' _struct_keywords.pdbx_keywords 'HYDROLASE, LYASE/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP OGG1_ARCFU O29876 ? 1 ;IEKAISRRIKEFRQLGEKGEVEFDFRPFLDFSVKATIRTELAFCISTANSSATAGLKFQRLLGQGVGVKEALTLAGVRFH NRKAEYIREAFKSFKLVEKALEAESSKAREILLKIKGLGMKEASHFLRNVGREDVAIIDRHILRWLERQGYEVPGTMTAK KYLEVEKILMEISEERGESLAEMDLRIWAEMTGKVLK ; 2 2 PDB 9O03 9O03 ? 2 ? 1 3 PDB 9O03 9O03 ? 3 ? 1 4 PDB 9O03 9O03 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9O03 A 7 ? 203 ? O29876 2 ? 198 ? 2 198 2 2 9O03 D 1 ? 6 ? 9O03 303 ? 308 ? 303 308 3 3 9O03 B 1 ? 7 ? 9O03 309 ? 315 ? 309 315 4 4 9O03 C 1 ? 15 ? 9O03 321 ? 335 ? 321 335 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9O03 ILE A 1 ? UNP O29876 ? ? 'expression tag' -4 1 1 9O03 SER A 2 ? UNP O29876 ? ? 'expression tag' -3 2 1 9O03 GLU A 3 ? UNP O29876 ? ? 'expression tag' -2 3 1 9O03 PHE A 4 ? UNP O29876 ? ? 'expression tag' -1 4 1 9O03 GLY A 5 ? UNP O29876 ? ? 'expression tag' 0 5 1 9O03 SER A 6 ? UNP O29876 ? ? 'expression tag' 1 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3580 ? 1 MORE -45 ? 1 'SSA (A^2)' 13920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 6 ? GLY A 25 ? SER A 1 GLY A 20 1 ? 20 HELX_P HELX_P2 AA2 ILE A 43 ? THR A 53 ? ILE A 38 THR A 48 1 ? 11 HELX_P HELX_P3 AA3 SER A 57 ? GLN A 70 ? SER A 52 GLN A 65 1 ? 14 HELX_P HELX_P4 AA4 GLY A 73 ? GLY A 82 ? GLY A 68 GLY A 77 1 ? 10 HELX_P HELX_P5 AA5 PHE A 85 ? SER A 99 ? PHE A 80 SER A 94 1 ? 15 HELX_P HELX_P6 AA6 SER A 99 ? GLU A 108 ? SER A 94 GLU A 103 1 ? 10 HELX_P HELX_P7 AA7 GLU A 110 ? LEU A 119 ? GLU A 105 LEU A 114 1 ? 10 HELX_P HELX_P8 AA8 GLY A 125 ? VAL A 136 ? GLY A 120 VAL A 131 1 ? 12 HELX_P HELX_P9 AA9 ASP A 145 ? ARG A 154 ? ASP A 140 ARG A 149 1 ? 10 HELX_P HELX_P10 AB1 THR A 164 ? ARG A 182 ? THR A 159 ARG A 177 1 ? 19 HELX_P HELX_P11 AB2 SER A 185 ? GLY A 199 ? SER A 180 GLY A 194 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 125 C ? ? ? 1_555 A MSE 126 N ? ? A GLY 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 126 C ? ? ? 1_555 A LYS 127 N ? ? A MSE 121 A LYS 122 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale3 covale both ? A THR 162 C ? ? ? 1_555 A MSE 163 N ? ? A THR 157 A MSE 158 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A MSE 163 C ? ? ? 1_555 A THR 164 N ? ? A MSE 158 A THR 159 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A LEU 175 C ? ? ? 1_555 A MSE 176 N ? ? A LEU 170 A MSE 171 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A MSE 176 C ? ? ? 1_555 A GLU 177 N ? ? A MSE 171 A GLU 172 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? A GLU 188 C ? ? ? 1_555 A MSE 189 N ? ? A GLU 183 A MSE 184 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? A MSE 189 C ? ? ? 1_555 A ASP 190 N ? ? A MSE 184 A ASP 185 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale9 covale both ? A GLU 196 C ? ? ? 1_555 A MSE 197 N ? ? A GLU 191 A MSE 192 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? A MSE 197 C ? ? ? 1_555 A THR 198 N ? ? A MSE 192 A THR 193 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale11 covale none ? B DC 5 "C3'" ? ? ? 1_555 B A1C6T 6 O01 ? ? D DC 307 D A1C6T 308 1_555 ? ? ? ? ? ? ? 1.431 ? ? hydrog1 hydrog ? ? C DA 1 N1 ? ? ? 1_555 D DT 7 N3 ? ? B DA 309 C DT 327 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DA 1 N6 ? ? ? 1_555 D DT 7 O4 ? ? B DA 309 C DT 327 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 6 N1 ? ? B DC 310 C DG 326 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 6 O6 ? ? B DC 310 C DG 326 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 6 N2 ? ? B DC 310 C DG 326 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 5 N1 ? ? B DC 311 C DG 325 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 5 O6 ? ? B DC 311 C DG 325 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 5 N2 ? ? B DC 311 C DG 325 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 4 N1 ? ? B DT 312 C DA 324 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 4 N6 ? ? B DT 312 C DA 324 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 3 N3 ? ? B DG 313 C DC 323 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 3 O2 ? ? B DG 313 C DC 323 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 3 N4 ? ? B DG 313 C DC 323 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 2 N1 ? ? B DC 314 C DG 322 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 2 O6 ? ? B DC 314 C DG 322 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 2 N2 ? ? B DC 314 C DG 322 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 1 N3 ? ? B DA 315 C DT 321 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 1 O4 ? ? B DA 315 C DT 321 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 13 O2 ? ? D DG 303 C DC 333 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog20 hydrog ? ? B DA 2 N1 ? ? ? 1_555 D DT 12 N3 ? ? D DA 304 C DT 332 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 2 N6 ? ? ? 1_555 D DT 12 O4 ? ? D DA 304 C DT 332 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 11 N3 ? ? D DG 305 C DC 331 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 11 O2 ? ? D DG 305 C DC 331 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 11 N4 ? ? D DG 305 C DC 331 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 4 N3 ? ? ? 1_555 D DA 10 N1 ? ? D DT 306 C DA 330 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 4 O4 ? ? ? 1_555 D DA 10 N6 ? ? D DT 306 C DA 330 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 5 N3 ? ? ? 1_555 D DG 9 N1 ? ? D DC 307 C DG 329 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 5 N4 ? ? ? 1_555 D DG 9 O6 ? ? D DC 307 C DG 329 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 5 O2 ? ? ? 1_555 D DG 9 N2 ? ? D DC 307 C DG 329 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 126 ? . . . . MSE A 121 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 163 ? . . . . MSE A 158 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 176 ? . . . . MSE A 171 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 189 ? . . . . MSE A 184 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 197 ? . . . . MSE A 192 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 32 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 27 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 33 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 28 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.31 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 26 ? ASP A 30 ? GLU A 21 ASP A 25 AA1 2 SER A 38 ? THR A 42 ? SER A 33 THR A 37 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 27 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 22 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ALA _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 41 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 36 # _pdbx_entry_details.entry_id 9O03 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 355 ? ? O A HOH 361 ? ? 1.81 2 1 O A HOH 319 ? ? O A HOH 322 ? ? 2.05 3 1 O A HOH 344 ? ? O A HOH 354 ? ? 2.07 4 1 O A HOH 338 ? ? O A HOH 358 ? ? 2.14 5 1 O A HOH 345 ? ? O A HOH 360 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 80 ? ? 61.70 60.68 2 1 LEU A 197 ? ? -103.08 -131.30 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 126 A MSE 121 ? MET 'modified residue' 2 A MSE 163 A MSE 158 ? MET 'modified residue' 3 A MSE 176 A MSE 171 ? MET 'modified residue' 4 A MSE 189 A MSE 184 ? MET 'modified residue' 5 A MSE 197 A MSE 192 ? MET 'modified residue' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE -4 ? A ILE 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 C DA 335 ? D DA 15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1C6T C04 C N N 1 A1C6T C05 C N R 2 A1C6T C06 C N N 3 A1C6T C07 C N N 4 A1C6T C08 C N N 5 A1C6T O01 O N N 6 A1C6T O03 O N N 7 A1C6T O09 O N N 8 A1C6T O10 O N N 9 A1C6T O11 O N N 10 A1C6T O12 O N N 11 A1C6T P02 P N N 12 A1C6T H1 H N N 13 A1C6T H2 H N N 14 A1C6T H3 H N N 15 A1C6T H4 H N N 16 A1C6T H5 H N N 17 A1C6T H6 H N N 18 A1C6T H7 H N N 19 A1C6T H8 H N N 20 A1C6T H9 H N N 21 ALA N N N N 22 ALA CA C N S 23 ALA C C N N 24 ALA O O N N 25 ALA CB C N N 26 ALA OXT O N N 27 ALA H H N N 28 ALA H2 H N N 29 ALA HA H N N 30 ALA HB1 H N N 31 ALA HB2 H N N 32 ALA HB3 H N N 33 ALA HXT H N N 34 ARG N N N N 35 ARG CA C N S 36 ARG C C N N 37 ARG O O N N 38 ARG CB C N N 39 ARG CG C N N 40 ARG CD C N N 41 ARG NE N N N 42 ARG CZ C N N 43 ARG NH1 N N N 44 ARG NH2 N N N 45 ARG OXT O N N 46 ARG H H N N 47 ARG H2 H N N 48 ARG HA H N N 49 ARG HB2 H N N 50 ARG HB3 H N N 51 ARG HG2 H N N 52 ARG HG3 H N N 53 ARG HD2 H N N 54 ARG HD3 H N N 55 ARG HE H N N 56 ARG HH11 H N N 57 ARG HH12 H N N 58 ARG HH21 H N N 59 ARG HH22 H N N 60 ARG HXT H N N 61 ASN N N N N 62 ASN CA C N S 63 ASN C C N N 64 ASN O O N N 65 ASN CB C N N 66 ASN CG C N N 67 ASN OD1 O N N 68 ASN ND2 N N N 69 ASN OXT O N N 70 ASN H H N N 71 ASN H2 H N N 72 ASN HA H N N 73 ASN HB2 H N N 74 ASN HB3 H N N 75 ASN HD21 H N N 76 ASN HD22 H N N 77 ASN HXT H N N 78 ASP N N N N 79 ASP CA C N S 80 ASP C C N N 81 ASP O O N N 82 ASP CB C N N 83 ASP CG C N N 84 ASP OD1 O N N 85 ASP OD2 O N N 86 ASP OXT O N N 87 ASP H H N N 88 ASP H2 H N N 89 ASP HA H N N 90 ASP HB2 H N N 91 ASP HB3 H N N 92 ASP HD2 H N N 93 ASP HXT H N N 94 CYS N N N N 95 CYS CA C N R 96 CYS C C N N 97 CYS O O N N 98 CYS CB C N N 99 CYS SG S N N 100 CYS OXT O N N 101 CYS H H N N 102 CYS H2 H N N 103 CYS HA H N N 104 CYS HB2 H N N 105 CYS HB3 H N N 106 CYS HG H N N 107 CYS HXT H N N 108 DA OP3 O N N 109 DA P P N N 110 DA OP1 O N N 111 DA OP2 O N N 112 DA "O5'" O N N 113 DA "C5'" C N N 114 DA "C4'" C N R 115 DA "O4'" O N N 116 DA "C3'" C N S 117 DA "O3'" O N N 118 DA "C2'" C N N 119 DA "C1'" C N R 120 DA N9 N Y N 121 DA C8 C Y N 122 DA N7 N Y N 123 DA C5 C Y N 124 DA C6 C Y N 125 DA N6 N N N 126 DA N1 N Y N 127 DA C2 C Y N 128 DA N3 N Y N 129 DA C4 C Y N 130 DA HOP3 H N N 131 DA HOP2 H N N 132 DA "H5'" H N N 133 DA "H5''" H N N 134 DA "H4'" H N N 135 DA "H3'" H N N 136 DA "HO3'" H N N 137 DA "H2'" H N N 138 DA "H2''" H N N 139 DA "H1'" H N N 140 DA H8 H N N 141 DA H61 H N N 142 DA H62 H N N 143 DA H2 H N N 144 DC OP3 O N N 145 DC P P N N 146 DC OP1 O N N 147 DC OP2 O N N 148 DC "O5'" O N N 149 DC "C5'" C N N 150 DC "C4'" C N R 151 DC "O4'" O N N 152 DC "C3'" C N S 153 DC "O3'" O N N 154 DC "C2'" C N N 155 DC "C1'" C N R 156 DC N1 N N N 157 DC C2 C N N 158 DC O2 O N N 159 DC N3 N N N 160 DC C4 C N N 161 DC N4 N N N 162 DC C5 C N N 163 DC C6 C N N 164 DC HOP3 H N N 165 DC HOP2 H N N 166 DC "H5'" H N N 167 DC "H5''" H N N 168 DC "H4'" H N N 169 DC "H3'" H N N 170 DC "HO3'" H N N 171 DC "H2'" H N N 172 DC "H2''" H N N 173 DC "H1'" H N N 174 DC H41 H N N 175 DC H42 H N N 176 DC H5 H N N 177 DC H6 H N N 178 DG OP3 O N N 179 DG P P N N 180 DG OP1 O N N 181 DG OP2 O N N 182 DG "O5'" O N N 183 DG "C5'" C N N 184 DG "C4'" C N R 185 DG "O4'" O N N 186 DG "C3'" C N S 187 DG "O3'" O N N 188 DG "C2'" C N N 189 DG "C1'" C N R 190 DG N9 N Y N 191 DG C8 C Y N 192 DG N7 N Y N 193 DG C5 C Y N 194 DG C6 C N N 195 DG O6 O N N 196 DG N1 N N N 197 DG C2 C N N 198 DG N2 N N N 199 DG N3 N N N 200 DG C4 C Y N 201 DG HOP3 H N N 202 DG HOP2 H N N 203 DG "H5'" H N N 204 DG "H5''" H N N 205 DG "H4'" H N N 206 DG "H3'" H N N 207 DG "HO3'" H N N 208 DG "H2'" H N N 209 DG "H2''" H N N 210 DG "H1'" H N N 211 DG H8 H N N 212 DG H1 H N N 213 DG H21 H N N 214 DG H22 H N N 215 DT OP3 O N N 216 DT P P N N 217 DT OP1 O N N 218 DT OP2 O N N 219 DT "O5'" O N N 220 DT "C5'" C N N 221 DT "C4'" C N R 222 DT "O4'" O N N 223 DT "C3'" C N S 224 DT "O3'" O N N 225 DT "C2'" C N N 226 DT "C1'" C N R 227 DT N1 N N N 228 DT C2 C N N 229 DT O2 O N N 230 DT N3 N N N 231 DT C4 C N N 232 DT O4 O N N 233 DT C5 C N N 234 DT C7 C N N 235 DT C6 C N N 236 DT HOP3 H N N 237 DT HOP2 H N N 238 DT "H5'" H N N 239 DT "H5''" H N N 240 DT "H4'" H N N 241 DT "H3'" H N N 242 DT "HO3'" H N N 243 DT "H2'" H N N 244 DT "H2''" H N N 245 DT "H1'" H N N 246 DT H3 H N N 247 DT H71 H N N 248 DT H72 H N N 249 DT H73 H N N 250 DT H6 H N N 251 GLN N N N N 252 GLN CA C N S 253 GLN C C N N 254 GLN O O N N 255 GLN CB C N N 256 GLN CG C N N 257 GLN CD C N N 258 GLN OE1 O N N 259 GLN NE2 N N N 260 GLN OXT O N N 261 GLN H H N N 262 GLN H2 H N N 263 GLN HA H N N 264 GLN HB2 H N N 265 GLN HB3 H N N 266 GLN HG2 H N N 267 GLN HG3 H N N 268 GLN HE21 H N N 269 GLN HE22 H N N 270 GLN HXT H N N 271 GLU N N N N 272 GLU CA C N S 273 GLU C C N N 274 GLU O O N N 275 GLU CB C N N 276 GLU CG C N N 277 GLU CD C N N 278 GLU OE1 O N N 279 GLU OE2 O N N 280 GLU OXT O N N 281 GLU H H N N 282 GLU H2 H N N 283 GLU HA H N N 284 GLU HB2 H N N 285 GLU HB3 H N N 286 GLU HG2 H N N 287 GLU HG3 H N N 288 GLU HE2 H N N 289 GLU HXT H N N 290 GLY N N N N 291 GLY CA C N N 292 GLY C C N N 293 GLY O O N N 294 GLY OXT O N N 295 GLY H H N N 296 GLY H2 H N N 297 GLY HA2 H N N 298 GLY HA3 H N N 299 GLY HXT H N N 300 HIS N N N N 301 HIS CA C N S 302 HIS C C N N 303 HIS O O N N 304 HIS CB C N N 305 HIS CG C Y N 306 HIS ND1 N Y N 307 HIS CD2 C Y N 308 HIS CE1 C Y N 309 HIS NE2 N Y N 310 HIS OXT O N N 311 HIS H H N N 312 HIS H2 H N N 313 HIS HA H N N 314 HIS HB2 H N N 315 HIS HB3 H N N 316 HIS HD1 H N N 317 HIS HD2 H N N 318 HIS HE1 H N N 319 HIS HE2 H N N 320 HIS HXT H N N 321 HOH O O N N 322 HOH H1 H N N 323 HOH H2 H N N 324 ILE N N N N 325 ILE CA C N S 326 ILE C C N N 327 ILE O O N N 328 ILE CB C N S 329 ILE CG1 C N N 330 ILE CG2 C N N 331 ILE CD1 C N N 332 ILE OXT O N N 333 ILE H H N N 334 ILE H2 H N N 335 ILE HA H N N 336 ILE HB H N N 337 ILE HG12 H N N 338 ILE HG13 H N N 339 ILE HG21 H N N 340 ILE HG22 H N N 341 ILE HG23 H N N 342 ILE HD11 H N N 343 ILE HD12 H N N 344 ILE HD13 H N N 345 ILE HXT H N N 346 LEU N N N N 347 LEU CA C N S 348 LEU C C N N 349 LEU O O N N 350 LEU CB C N N 351 LEU CG C N N 352 LEU CD1 C N N 353 LEU CD2 C N N 354 LEU OXT O N N 355 LEU H H N N 356 LEU H2 H N N 357 LEU HA H N N 358 LEU HB2 H N N 359 LEU HB3 H N N 360 LEU HG H N N 361 LEU HD11 H N N 362 LEU HD12 H N N 363 LEU HD13 H N N 364 LEU HD21 H N N 365 LEU HD22 H N N 366 LEU HD23 H N N 367 LEU HXT H N N 368 LYS N N N N 369 LYS CA C N S 370 LYS C C N N 371 LYS O O N N 372 LYS CB C N N 373 LYS CG C N N 374 LYS CD C N N 375 LYS CE C N N 376 LYS NZ N N N 377 LYS OXT O N N 378 LYS H H N N 379 LYS H2 H N N 380 LYS HA H N N 381 LYS HB2 H N N 382 LYS HB3 H N N 383 LYS HG2 H N N 384 LYS HG3 H N N 385 LYS HD2 H N N 386 LYS HD3 H N N 387 LYS HE2 H N N 388 LYS HE3 H N N 389 LYS HZ1 H N N 390 LYS HZ2 H N N 391 LYS HZ3 H N N 392 LYS HXT H N N 393 MSE N N N N 394 MSE CA C N S 395 MSE C C N N 396 MSE O O N N 397 MSE OXT O N N 398 MSE CB C N N 399 MSE CG C N N 400 MSE SE SE N N 401 MSE CE C N N 402 MSE H H N N 403 MSE H2 H N N 404 MSE HA H N N 405 MSE HXT H N N 406 MSE HB2 H N N 407 MSE HB3 H N N 408 MSE HG2 H N N 409 MSE HG3 H N N 410 MSE HE1 H N N 411 MSE HE2 H N N 412 MSE HE3 H N N 413 PHE N N N N 414 PHE CA C N S 415 PHE C C N N 416 PHE O O N N 417 PHE CB C N N 418 PHE CG C Y N 419 PHE CD1 C Y N 420 PHE CD2 C Y N 421 PHE CE1 C Y N 422 PHE CE2 C Y N 423 PHE CZ C Y N 424 PHE OXT O N N 425 PHE H H N N 426 PHE H2 H N N 427 PHE HA H N N 428 PHE HB2 H N N 429 PHE HB3 H N N 430 PHE HD1 H N N 431 PHE HD2 H N N 432 PHE HE1 H N N 433 PHE HE2 H N N 434 PHE HZ H N N 435 PHE HXT H N N 436 PRO N N N N 437 PRO CA C N S 438 PRO C C N N 439 PRO O O N N 440 PRO CB C N N 441 PRO CG C N N 442 PRO CD C N N 443 PRO OXT O N N 444 PRO H H N N 445 PRO HA H N N 446 PRO HB2 H N N 447 PRO HB3 H N N 448 PRO HG2 H N N 449 PRO HG3 H N N 450 PRO HD2 H N N 451 PRO HD3 H N N 452 PRO HXT H N N 453 SER N N N N 454 SER CA C N S 455 SER C C N N 456 SER O O N N 457 SER CB C N N 458 SER OG O N N 459 SER OXT O N N 460 SER H H N N 461 SER H2 H N N 462 SER HA H N N 463 SER HB2 H N N 464 SER HB3 H N N 465 SER HG H N N 466 SER HXT H N N 467 SO4 S S N N 468 SO4 O1 O N N 469 SO4 O2 O N N 470 SO4 O3 O N N 471 SO4 O4 O N N 472 THR N N N N 473 THR CA C N S 474 THR C C N N 475 THR O O N N 476 THR CB C N R 477 THR OG1 O N N 478 THR CG2 C N N 479 THR OXT O N N 480 THR H H N N 481 THR H2 H N N 482 THR HA H N N 483 THR HB H N N 484 THR HG1 H N N 485 THR HG21 H N N 486 THR HG22 H N N 487 THR HG23 H N N 488 THR HXT H N N 489 TRP N N N N 490 TRP CA C N S 491 TRP C C N N 492 TRP O O N N 493 TRP CB C N N 494 TRP CG C Y N 495 TRP CD1 C Y N 496 TRP CD2 C Y N 497 TRP NE1 N Y N 498 TRP CE2 C Y N 499 TRP CE3 C Y N 500 TRP CZ2 C Y N 501 TRP CZ3 C Y N 502 TRP CH2 C Y N 503 TRP OXT O N N 504 TRP H H N N 505 TRP H2 H N N 506 TRP HA H N N 507 TRP HB2 H N N 508 TRP HB3 H N N 509 TRP HD1 H N N 510 TRP HE1 H N N 511 TRP HE3 H N N 512 TRP HZ2 H N N 513 TRP HZ3 H N N 514 TRP HH2 H N N 515 TRP HXT H N N 516 TYR N N N N 517 TYR CA C N S 518 TYR C C N N 519 TYR O O N N 520 TYR CB C N N 521 TYR CG C Y N 522 TYR CD1 C Y N 523 TYR CD2 C Y N 524 TYR CE1 C Y N 525 TYR CE2 C Y N 526 TYR CZ C Y N 527 TYR OH O N N 528 TYR OXT O N N 529 TYR H H N N 530 TYR H2 H N N 531 TYR HA H N N 532 TYR HB2 H N N 533 TYR HB3 H N N 534 TYR HD1 H N N 535 TYR HD2 H N N 536 TYR HE1 H N N 537 TYR HE2 H N N 538 TYR HH H N N 539 TYR HXT H N N 540 VAL N N N N 541 VAL CA C N S 542 VAL C C N N 543 VAL O O N N 544 VAL CB C N N 545 VAL CG1 C N N 546 VAL CG2 C N N 547 VAL OXT O N N 548 VAL H H N N 549 VAL H2 H N N 550 VAL HA H N N 551 VAL HB H N N 552 VAL HG11 H N N 553 VAL HG12 H N N 554 VAL HG13 H N N 555 VAL HG21 H N N 556 VAL HG22 H N N 557 VAL HG23 H N N 558 VAL HXT H N N 559 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1C6T O09 C08 doub N N 1 A1C6T C08 C07 sing N N 2 A1C6T C07 C06 doub N E 3 A1C6T C06 C05 sing N N 4 A1C6T C05 O10 sing N N 5 A1C6T C05 C04 sing N N 6 A1C6T C04 O03 sing N N 7 A1C6T O03 P02 sing N N 8 A1C6T O12 P02 doub N N 9 A1C6T P02 O11 sing N N 10 A1C6T P02 O01 sing N N 11 A1C6T C04 H1 sing N N 12 A1C6T C04 H2 sing N N 13 A1C6T C05 H3 sing N N 14 A1C6T C06 H4 sing N N 15 A1C6T C07 H5 sing N N 16 A1C6T C08 H6 sing N N 17 A1C6T O01 H7 sing N N 18 A1C6T O10 H8 sing N N 19 A1C6T O11 H9 sing N N 20 ALA N CA sing N N 21 ALA N H sing N N 22 ALA N H2 sing N N 23 ALA CA C sing N N 24 ALA CA CB sing N N 25 ALA CA HA sing N N 26 ALA C O doub N N 27 ALA C OXT sing N N 28 ALA CB HB1 sing N N 29 ALA CB HB2 sing N N 30 ALA CB HB3 sing N N 31 ALA OXT HXT sing N N 32 ARG N CA sing N N 33 ARG N H sing N N 34 ARG N H2 sing N N 35 ARG CA C sing N N 36 ARG CA CB sing N N 37 ARG CA HA sing N N 38 ARG C O doub N N 39 ARG C OXT sing N N 40 ARG CB CG sing N N 41 ARG CB HB2 sing N N 42 ARG CB HB3 sing N N 43 ARG CG CD sing N N 44 ARG CG HG2 sing N N 45 ARG CG HG3 sing N N 46 ARG CD NE sing N N 47 ARG CD HD2 sing N N 48 ARG CD HD3 sing N N 49 ARG NE CZ sing N N 50 ARG NE HE sing N N 51 ARG CZ NH1 sing N N 52 ARG CZ NH2 doub N N 53 ARG NH1 HH11 sing N N 54 ARG NH1 HH12 sing N N 55 ARG NH2 HH21 sing N N 56 ARG NH2 HH22 sing N N 57 ARG OXT HXT sing N N 58 ASN N CA sing N N 59 ASN N H sing N N 60 ASN N H2 sing N N 61 ASN CA C sing N N 62 ASN CA CB sing N N 63 ASN CA HA sing N N 64 ASN C O doub N N 65 ASN C OXT sing N N 66 ASN CB CG sing N N 67 ASN CB HB2 sing N N 68 ASN CB HB3 sing N N 69 ASN CG OD1 doub N N 70 ASN CG ND2 sing N N 71 ASN ND2 HD21 sing N N 72 ASN ND2 HD22 sing N N 73 ASN OXT HXT sing N N 74 ASP N CA sing N N 75 ASP N H sing N N 76 ASP N H2 sing N N 77 ASP CA C sing N N 78 ASP CA CB sing N N 79 ASP CA HA sing N N 80 ASP C O doub N N 81 ASP C OXT sing N N 82 ASP CB CG sing N N 83 ASP CB HB2 sing N N 84 ASP CB HB3 sing N N 85 ASP CG OD1 doub N N 86 ASP CG OD2 sing N N 87 ASP OD2 HD2 sing N N 88 ASP OXT HXT sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 DA OP3 P sing N N 103 DA OP3 HOP3 sing N N 104 DA P OP1 doub N N 105 DA P OP2 sing N N 106 DA P "O5'" sing N N 107 DA OP2 HOP2 sing N N 108 DA "O5'" "C5'" sing N N 109 DA "C5'" "C4'" sing N N 110 DA "C5'" "H5'" sing N N 111 DA "C5'" "H5''" sing N N 112 DA "C4'" "O4'" sing N N 113 DA "C4'" "C3'" sing N N 114 DA "C4'" "H4'" sing N N 115 DA "O4'" "C1'" sing N N 116 DA "C3'" "O3'" sing N N 117 DA "C3'" "C2'" sing N N 118 DA "C3'" "H3'" sing N N 119 DA "O3'" "HO3'" sing N N 120 DA "C2'" "C1'" sing N N 121 DA "C2'" "H2'" sing N N 122 DA "C2'" "H2''" sing N N 123 DA "C1'" N9 sing N N 124 DA "C1'" "H1'" sing N N 125 DA N9 C8 sing Y N 126 DA N9 C4 sing Y N 127 DA C8 N7 doub Y N 128 DA C8 H8 sing N N 129 DA N7 C5 sing Y N 130 DA C5 C6 sing Y N 131 DA C5 C4 doub Y N 132 DA C6 N6 sing N N 133 DA C6 N1 doub Y N 134 DA N6 H61 sing N N 135 DA N6 H62 sing N N 136 DA N1 C2 sing Y N 137 DA C2 N3 doub Y N 138 DA C2 H2 sing N N 139 DA N3 C4 sing Y N 140 DC OP3 P sing N N 141 DC OP3 HOP3 sing N N 142 DC P OP1 doub N N 143 DC P OP2 sing N N 144 DC P "O5'" sing N N 145 DC OP2 HOP2 sing N N 146 DC "O5'" "C5'" sing N N 147 DC "C5'" "C4'" sing N N 148 DC "C5'" "H5'" sing N N 149 DC "C5'" "H5''" sing N N 150 DC "C4'" "O4'" sing N N 151 DC "C4'" "C3'" sing N N 152 DC "C4'" "H4'" sing N N 153 DC "O4'" "C1'" sing N N 154 DC "C3'" "O3'" sing N N 155 DC "C3'" "C2'" sing N N 156 DC "C3'" "H3'" sing N N 157 DC "O3'" "HO3'" sing N N 158 DC "C2'" "C1'" sing N N 159 DC "C2'" "H2'" sing N N 160 DC "C2'" "H2''" sing N N 161 DC "C1'" N1 sing N N 162 DC "C1'" "H1'" sing N N 163 DC N1 C2 sing N N 164 DC N1 C6 sing N N 165 DC C2 O2 doub N N 166 DC C2 N3 sing N N 167 DC N3 C4 doub N N 168 DC C4 N4 sing N N 169 DC C4 C5 sing N N 170 DC N4 H41 sing N N 171 DC N4 H42 sing N N 172 DC C5 C6 doub N N 173 DC C5 H5 sing N N 174 DC C6 H6 sing N N 175 DG OP3 P sing N N 176 DG OP3 HOP3 sing N N 177 DG P OP1 doub N N 178 DG P OP2 sing N N 179 DG P "O5'" sing N N 180 DG OP2 HOP2 sing N N 181 DG "O5'" "C5'" sing N N 182 DG "C5'" "C4'" sing N N 183 DG "C5'" "H5'" sing N N 184 DG "C5'" "H5''" sing N N 185 DG "C4'" "O4'" sing N N 186 DG "C4'" "C3'" sing N N 187 DG "C4'" "H4'" sing N N 188 DG "O4'" "C1'" sing N N 189 DG "C3'" "O3'" sing N N 190 DG "C3'" "C2'" sing N N 191 DG "C3'" "H3'" sing N N 192 DG "O3'" "HO3'" sing N N 193 DG "C2'" "C1'" sing N N 194 DG "C2'" "H2'" sing N N 195 DG "C2'" "H2''" sing N N 196 DG "C1'" N9 sing N N 197 DG "C1'" "H1'" sing N N 198 DG N9 C8 sing Y N 199 DG N9 C4 sing Y N 200 DG C8 N7 doub Y N 201 DG C8 H8 sing N N 202 DG N7 C5 sing Y N 203 DG C5 C6 sing N N 204 DG C5 C4 doub Y N 205 DG C6 O6 doub N N 206 DG C6 N1 sing N N 207 DG N1 C2 sing N N 208 DG N1 H1 sing N N 209 DG C2 N2 sing N N 210 DG C2 N3 doub N N 211 DG N2 H21 sing N N 212 DG N2 H22 sing N N 213 DG N3 C4 sing N N 214 DT OP3 P sing N N 215 DT OP3 HOP3 sing N N 216 DT P OP1 doub N N 217 DT P OP2 sing N N 218 DT P "O5'" sing N N 219 DT OP2 HOP2 sing N N 220 DT "O5'" "C5'" sing N N 221 DT "C5'" "C4'" sing N N 222 DT "C5'" "H5'" sing N N 223 DT "C5'" "H5''" sing N N 224 DT "C4'" "O4'" sing N N 225 DT "C4'" "C3'" sing N N 226 DT "C4'" "H4'" sing N N 227 DT "O4'" "C1'" sing N N 228 DT "C3'" "O3'" sing N N 229 DT "C3'" "C2'" sing N N 230 DT "C3'" "H3'" sing N N 231 DT "O3'" "HO3'" sing N N 232 DT "C2'" "C1'" sing N N 233 DT "C2'" "H2'" sing N N 234 DT "C2'" "H2''" sing N N 235 DT "C1'" N1 sing N N 236 DT "C1'" "H1'" sing N N 237 DT N1 C2 sing N N 238 DT N1 C6 sing N N 239 DT C2 O2 doub N N 240 DT C2 N3 sing N N 241 DT N3 C4 sing N N 242 DT N3 H3 sing N N 243 DT C4 O4 doub N N 244 DT C4 C5 sing N N 245 DT C5 C7 sing N N 246 DT C5 C6 doub N N 247 DT C7 H71 sing N N 248 DT C7 H72 sing N N 249 DT C7 H73 sing N N 250 DT C6 H6 sing N N 251 GLN N CA sing N N 252 GLN N H sing N N 253 GLN N H2 sing N N 254 GLN CA C sing N N 255 GLN CA CB sing N N 256 GLN CA HA sing N N 257 GLN C O doub N N 258 GLN C OXT sing N N 259 GLN CB CG sing N N 260 GLN CB HB2 sing N N 261 GLN CB HB3 sing N N 262 GLN CG CD sing N N 263 GLN CG HG2 sing N N 264 GLN CG HG3 sing N N 265 GLN CD OE1 doub N N 266 GLN CD NE2 sing N N 267 GLN NE2 HE21 sing N N 268 GLN NE2 HE22 sing N N 269 GLN OXT HXT sing N N 270 GLU N CA sing N N 271 GLU N H sing N N 272 GLU N H2 sing N N 273 GLU CA C sing N N 274 GLU CA CB sing N N 275 GLU CA HA sing N N 276 GLU C O doub N N 277 GLU C OXT sing N N 278 GLU CB CG sing N N 279 GLU CB HB2 sing N N 280 GLU CB HB3 sing N N 281 GLU CG CD sing N N 282 GLU CG HG2 sing N N 283 GLU CG HG3 sing N N 284 GLU CD OE1 doub N N 285 GLU CD OE2 sing N N 286 GLU OE2 HE2 sing N N 287 GLU OXT HXT sing N N 288 GLY N CA sing N N 289 GLY N H sing N N 290 GLY N H2 sing N N 291 GLY CA C sing N N 292 GLY CA HA2 sing N N 293 GLY CA HA3 sing N N 294 GLY C O doub N N 295 GLY C OXT sing N N 296 GLY OXT HXT sing N N 297 HIS N CA sing N N 298 HIS N H sing N N 299 HIS N H2 sing N N 300 HIS CA C sing N N 301 HIS CA CB sing N N 302 HIS CA HA sing N N 303 HIS C O doub N N 304 HIS C OXT sing N N 305 HIS CB CG sing N N 306 HIS CB HB2 sing N N 307 HIS CB HB3 sing N N 308 HIS CG ND1 sing Y N 309 HIS CG CD2 doub Y N 310 HIS ND1 CE1 doub Y N 311 HIS ND1 HD1 sing N N 312 HIS CD2 NE2 sing Y N 313 HIS CD2 HD2 sing N N 314 HIS CE1 NE2 sing Y N 315 HIS CE1 HE1 sing N N 316 HIS NE2 HE2 sing N N 317 HIS OXT HXT sing N N 318 HOH O H1 sing N N 319 HOH O H2 sing N N 320 ILE N CA sing N N 321 ILE N H sing N N 322 ILE N H2 sing N N 323 ILE CA C sing N N 324 ILE CA CB sing N N 325 ILE CA HA sing N N 326 ILE C O doub N N 327 ILE C OXT sing N N 328 ILE CB CG1 sing N N 329 ILE CB CG2 sing N N 330 ILE CB HB sing N N 331 ILE CG1 CD1 sing N N 332 ILE CG1 HG12 sing N N 333 ILE CG1 HG13 sing N N 334 ILE CG2 HG21 sing N N 335 ILE CG2 HG22 sing N N 336 ILE CG2 HG23 sing N N 337 ILE CD1 HD11 sing N N 338 ILE CD1 HD12 sing N N 339 ILE CD1 HD13 sing N N 340 ILE OXT HXT sing N N 341 LEU N CA sing N N 342 LEU N H sing N N 343 LEU N H2 sing N N 344 LEU CA C sing N N 345 LEU CA CB sing N N 346 LEU CA HA sing N N 347 LEU C O doub N N 348 LEU C OXT sing N N 349 LEU CB CG sing N N 350 LEU CB HB2 sing N N 351 LEU CB HB3 sing N N 352 LEU CG CD1 sing N N 353 LEU CG CD2 sing N N 354 LEU CG HG sing N N 355 LEU CD1 HD11 sing N N 356 LEU CD1 HD12 sing N N 357 LEU CD1 HD13 sing N N 358 LEU CD2 HD21 sing N N 359 LEU CD2 HD22 sing N N 360 LEU CD2 HD23 sing N N 361 LEU OXT HXT sing N N 362 LYS N CA sing N N 363 LYS N H sing N N 364 LYS N H2 sing N N 365 LYS CA C sing N N 366 LYS CA CB sing N N 367 LYS CA HA sing N N 368 LYS C O doub N N 369 LYS C OXT sing N N 370 LYS CB CG sing N N 371 LYS CB HB2 sing N N 372 LYS CB HB3 sing N N 373 LYS CG CD sing N N 374 LYS CG HG2 sing N N 375 LYS CG HG3 sing N N 376 LYS CD CE sing N N 377 LYS CD HD2 sing N N 378 LYS CD HD3 sing N N 379 LYS CE NZ sing N N 380 LYS CE HE2 sing N N 381 LYS CE HE3 sing N N 382 LYS NZ HZ1 sing N N 383 LYS NZ HZ2 sing N N 384 LYS NZ HZ3 sing N N 385 LYS OXT HXT sing N N 386 MSE N CA sing N N 387 MSE N H sing N N 388 MSE N H2 sing N N 389 MSE CA C sing N N 390 MSE CA CB sing N N 391 MSE CA HA sing N N 392 MSE C O doub N N 393 MSE C OXT sing N N 394 MSE OXT HXT sing N N 395 MSE CB CG sing N N 396 MSE CB HB2 sing N N 397 MSE CB HB3 sing N N 398 MSE CG SE sing N N 399 MSE CG HG2 sing N N 400 MSE CG HG3 sing N N 401 MSE SE CE sing N N 402 MSE CE HE1 sing N N 403 MSE CE HE2 sing N N 404 MSE CE HE3 sing N N 405 PHE N CA sing N N 406 PHE N H sing N N 407 PHE N H2 sing N N 408 PHE CA C sing N N 409 PHE CA CB sing N N 410 PHE CA HA sing N N 411 PHE C O doub N N 412 PHE C OXT sing N N 413 PHE CB CG sing N N 414 PHE CB HB2 sing N N 415 PHE CB HB3 sing N N 416 PHE CG CD1 doub Y N 417 PHE CG CD2 sing Y N 418 PHE CD1 CE1 sing Y N 419 PHE CD1 HD1 sing N N 420 PHE CD2 CE2 doub Y N 421 PHE CD2 HD2 sing N N 422 PHE CE1 CZ doub Y N 423 PHE CE1 HE1 sing N N 424 PHE CE2 CZ sing Y N 425 PHE CE2 HE2 sing N N 426 PHE CZ HZ sing N N 427 PHE OXT HXT sing N N 428 PRO N CA sing N N 429 PRO N CD sing N N 430 PRO N H sing N N 431 PRO CA C sing N N 432 PRO CA CB sing N N 433 PRO CA HA sing N N 434 PRO C O doub N N 435 PRO C OXT sing N N 436 PRO CB CG sing N N 437 PRO CB HB2 sing N N 438 PRO CB HB3 sing N N 439 PRO CG CD sing N N 440 PRO CG HG2 sing N N 441 PRO CG HG3 sing N N 442 PRO CD HD2 sing N N 443 PRO CD HD3 sing N N 444 PRO OXT HXT sing N N 445 SER N CA sing N N 446 SER N H sing N N 447 SER N H2 sing N N 448 SER CA C sing N N 449 SER CA CB sing N N 450 SER CA HA sing N N 451 SER C O doub N N 452 SER C OXT sing N N 453 SER CB OG sing N N 454 SER CB HB2 sing N N 455 SER CB HB3 sing N N 456 SER OG HG sing N N 457 SER OXT HXT sing N N 458 SO4 S O1 doub N N 459 SO4 S O2 doub N N 460 SO4 S O3 sing N N 461 SO4 S O4 sing N N 462 THR N CA sing N N 463 THR N H sing N N 464 THR N H2 sing N N 465 THR CA C sing N N 466 THR CA CB sing N N 467 THR CA HA sing N N 468 THR C O doub N N 469 THR C OXT sing N N 470 THR CB OG1 sing N N 471 THR CB CG2 sing N N 472 THR CB HB sing N N 473 THR OG1 HG1 sing N N 474 THR CG2 HG21 sing N N 475 THR CG2 HG22 sing N N 476 THR CG2 HG23 sing N N 477 THR OXT HXT sing N N 478 TRP N CA sing N N 479 TRP N H sing N N 480 TRP N H2 sing N N 481 TRP CA C sing N N 482 TRP CA CB sing N N 483 TRP CA HA sing N N 484 TRP C O doub N N 485 TRP C OXT sing N N 486 TRP CB CG sing N N 487 TRP CB HB2 sing N N 488 TRP CB HB3 sing N N 489 TRP CG CD1 doub Y N 490 TRP CG CD2 sing Y N 491 TRP CD1 NE1 sing Y N 492 TRP CD1 HD1 sing N N 493 TRP CD2 CE2 doub Y N 494 TRP CD2 CE3 sing Y N 495 TRP NE1 CE2 sing Y N 496 TRP NE1 HE1 sing N N 497 TRP CE2 CZ2 sing Y N 498 TRP CE3 CZ3 doub Y N 499 TRP CE3 HE3 sing N N 500 TRP CZ2 CH2 doub Y N 501 TRP CZ2 HZ2 sing N N 502 TRP CZ3 CH2 sing Y N 503 TRP CZ3 HZ3 sing N N 504 TRP CH2 HH2 sing N N 505 TRP OXT HXT sing N N 506 TYR N CA sing N N 507 TYR N H sing N N 508 TYR N H2 sing N N 509 TYR CA C sing N N 510 TYR CA CB sing N N 511 TYR CA HA sing N N 512 TYR C O doub N N 513 TYR C OXT sing N N 514 TYR CB CG sing N N 515 TYR CB HB2 sing N N 516 TYR CB HB3 sing N N 517 TYR CG CD1 doub Y N 518 TYR CG CD2 sing Y N 519 TYR CD1 CE1 sing Y N 520 TYR CD1 HD1 sing N N 521 TYR CD2 CE2 doub Y N 522 TYR CD2 HD2 sing N N 523 TYR CE1 CZ doub Y N 524 TYR CE1 HE1 sing N N 525 TYR CE2 CZ sing Y N 526 TYR CE2 HE2 sing N N 527 TYR CZ OH sing N N 528 TYR OH HH sing N N 529 TYR OXT HXT sing N N 530 VAL N CA sing N N 531 VAL N H sing N N 532 VAL N H2 sing N N 533 VAL CA C sing N N 534 VAL CA CB sing N N 535 VAL CA HA sing N N 536 VAL C O doub N N 537 VAL C OXT sing N N 538 VAL CB CG1 sing N N 539 VAL CB CG2 sing N N 540 VAL CB HB sing N N 541 VAL CG1 HG11 sing N N 542 VAL CG1 HG12 sing N N 543 VAL CG1 HG13 sing N N 544 VAL CG2 HG21 sing N N 545 VAL CG2 HG22 sing N N 546 VAL CG2 HG23 sing N N 547 VAL OXT HXT sing N N 548 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9O03 'double helix' 9O03 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 13 1_555 -1.777 0.180 -0.078 -7.745 -22.621 28.338 1 D_DG303:DC333_C D 303 ? C 333 ? ? 1 1 B DA 2 1_555 D DT 12 1_555 -0.310 0.048 -0.392 -8.938 -14.026 0.150 2 D_DA304:DT332_C D 304 ? C 332 ? 20 1 1 B DG 3 1_555 D DC 11 1_555 0.188 0.093 0.077 -3.869 -10.387 -1.280 3 D_DG305:DC331_C D 305 ? C 331 ? 19 1 1 B DT 4 1_555 D DA 10 1_555 0.019 0.003 0.270 -10.776 -10.275 2.502 4 D_DT306:DA330_C D 306 ? C 330 ? 20 1 1 B DC 5 1_555 D DG 9 1_555 -0.020 -0.153 0.020 -7.692 -2.983 3.395 5 D_DC307:DG329_C D 307 ? C 329 ? 19 1 1 C DA 1 1_555 D DT 7 1_555 -0.180 -0.136 -0.300 -4.690 -12.286 0.690 6 B_DA309:DT327_C B 309 ? C 327 ? 20 1 1 C DC 2 1_555 D DG 6 1_555 0.609 -0.062 0.052 -1.249 -19.411 5.334 7 B_DC310:DG326_C B 310 ? C 326 ? 19 1 1 C DC 3 1_555 D DG 5 1_555 -0.150 -0.035 0.413 -5.236 -10.436 -1.723 8 B_DC311:DG325_C B 311 ? C 325 ? 19 1 1 C DT 4 1_555 D DA 4 1_555 0.156 -0.185 0.625 -2.655 -14.973 -0.759 9 B_DT312:DA324_C B 312 ? C 324 ? 20 1 1 C DG 5 1_555 D DC 3 1_555 -0.686 -0.017 0.152 0.192 -6.076 8.439 10 B_DG313:DC323_C B 313 ? C 323 ? 19 1 1 C DC 6 1_555 D DG 2 1_555 0.508 -0.146 -0.135 6.335 -3.805 5.795 11 B_DC314:DG322_C B 314 ? C 322 ? 19 1 1 C DA 7 1_555 D DT 1 1_555 0.595 -0.194 0.275 8.273 0.161 1.527 12 B_DA315:DT321_C B 315 ? C 321 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 13 1_555 B DA 2 1_555 D DT 12 1_555 -1.455 0.377 3.697 -2.906 -2.637 47.021 0.716 1.547 3.750 -3.299 3.635 47.176 1 DD_DG303DA304:DT332DC333_CC D 303 ? C 333 ? D 304 ? C 332 ? 1 B DA 2 1_555 D DT 12 1_555 B DG 3 1_555 D DC 11 1_555 -0.382 -0.260 3.149 -10.283 4.886 34.842 -1.071 -0.772 3.072 7.904 16.632 36.600 2 DD_DA304DG305:DC331DT332_CC D 304 ? C 332 ? D 305 ? C 331 ? 1 B DG 3 1_555 D DC 11 1_555 B DT 4 1_555 D DA 10 1_555 -0.156 -0.765 3.498 1.650 -3.334 35.620 -0.727 0.509 3.542 -5.432 -2.688 35.807 3 DD_DG305DT306:DA330DC331_CC D 305 ? C 331 ? D 306 ? C 330 ? 1 B DT 4 1_555 D DA 10 1_555 B DC 5 1_555 D DG 9 1_555 0.155 -0.275 3.216 3.322 10.761 31.303 -2.237 0.270 2.964 19.182 -5.922 33.220 4 DD_DT306DC307:DG329DA330_CC D 306 ? C 330 ? D 307 ? C 329 ? 1 C DA 1 1_555 D DT 7 1_555 C DC 2 1_555 D DG 6 1_555 -0.032 -0.292 3.210 -4.059 2.586 33.055 -0.928 -0.603 3.160 4.516 7.087 33.394 5 BB_DA309DC310:DG326DT327_CC B 309 ? C 327 ? B 310 ? C 326 ? 1 C DC 2 1_555 D DG 6 1_555 C DC 3 1_555 D DG 5 1_555 -0.230 -0.209 3.438 -1.372 9.073 30.260 -2.143 0.156 3.248 16.898 2.556 31.590 6 BB_DC310DC311:DG325DG326_CC B 310 ? C 326 ? B 311 ? C 325 ? 1 C DC 3 1_555 D DG 5 1_555 C DT 4 1_555 D DA 4 1_555 0.008 -0.088 3.284 0.374 1.995 33.180 -0.489 0.049 3.273 3.489 -0.654 33.241 7 BB_DC311DT312:DA324DG325_CC B 311 ? C 325 ? B 312 ? C 324 ? 1 C DT 4 1_555 D DA 4 1_555 C DG 5 1_555 D DC 3 1_555 0.893 0.407 3.220 3.996 0.009 34.653 0.678 -0.885 3.299 0.015 -6.681 34.876 8 BB_DT312DG313:DC323DA324_CC B 312 ? C 324 ? B 313 ? C 323 ? 1 C DG 5 1_555 D DC 3 1_555 C DC 6 1_555 D DG 2 1_555 0.358 0.005 3.277 1.533 0.772 38.853 -0.086 -0.351 3.288 1.160 -2.304 38.889 9 BB_DG313DC314:DG322DC323_CC B 313 ? C 323 ? B 314 ? C 322 ? 1 C DC 6 1_555 D DG 2 1_555 C DA 7 1_555 D DT 1 1_555 -0.722 -0.392 3.356 -6.169 0.241 33.377 -0.713 0.203 3.428 0.416 10.627 33.928 10 BB_DC314DA315:DT321DG322_CC B 314 ? C 322 ? B 315 ? C 321 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'P01 CA092584' 1 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'R35 CA220430' 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'AfOgg1-K122S-8-oxoG DNA duplex model (see related entry) was used for MR' # _atom_sites.entry_id 9O03 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.017917 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004564 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022314 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017483 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S SE # loop_ # loop_ #