HEADER TRANSFERASE 15-APR-25 9O7V TITLE CRYSTAL STRUCTURE OF THE RIB:C HETERODIMER OF PKA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE TYPE I-BETA REGULATORY COMPND 9 SUBUNIT; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PRKACA, PKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PRKAR1B; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CAMP-DEPENDENT PROTEIN KINASE, REGULATORY SUBUNIT, N3A MOTIF, KEYWDS 2 ALLOSTERIC CROSSTALK, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.WU,R.ILOUZ,S.S.TAYLOR REVDAT 1 29-OCT-25 9O7V 0 JRNL AUTH J.WU,J.G.H.BRUYSTENS,P.SAHOO,J.BUBIS,R.A.MAILLARD, JRNL AUTH 2 S.S.TAYLOR,R.ILOUZ JRNL TITL N3A MOTIFS IN RI BETA MEDIATE ALLOSTERIC CROSSTALK BETWEEN JRNL TITL 2 CAMP AND ATP IN PKA ACTIVATION. JRNL REF PROTEIN SCI. V. 34 70332 2025 JRNL REFN ESSN 1469-896X JRNL PMID 41108566 JRNL DOI 10.1002/PRO.70332 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 11271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3700 - 5.8713 0.99 2860 138 0.2250 0.3019 REMARK 3 2 5.8713 - 4.6616 1.00 2669 144 0.2361 0.2832 REMARK 3 3 4.6616 - 4.0728 1.00 2611 134 0.2125 0.2763 REMARK 3 4 4.0728 - 3.7000 0.99 2594 121 0.2685 0.3067 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 82.26 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 13.55770 REMARK 3 B22 (A**2) : 13.55770 REMARK 3 B33 (A**2) : -27.11550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5012 REMARK 3 ANGLE : 2.052 6785 REMARK 3 CHIRALITY : 0.108 738 REMARK 3 PLANARITY : 0.010 876 REMARK 3 DIHEDRAL : 16.427 1849 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9O7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-25. REMARK 100 THE DEPOSITION ID IS D_1000295066. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11338 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M AMMONIUM SULFATE AND 0.1M SODIUM REMARK 280 ACETATE AT PH 5.3., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 208.92133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 104.46067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 156.69100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.23033 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 261.15167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 208.92133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 104.46067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 52.23033 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 156.69100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 261.15167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 GLN A 12 REMARK 465 GLU A 13 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 PRO B 3 REMARK 465 ALA B 4 REMARK 465 CYS B 5 REMARK 465 PRO B 6 REMARK 465 SER B 7 REMARK 465 GLU B 8 REMARK 465 GLU B 9 REMARK 465 ASP B 10 REMARK 465 GLU B 11 REMARK 465 SER B 12 REMARK 465 LEU B 13 REMARK 465 LYS B 14 REMARK 465 GLY B 15 REMARK 465 CYS B 16 REMARK 465 GLU B 17 REMARK 465 LEU B 18 REMARK 465 TYR B 19 REMARK 465 VAL B 20 REMARK 465 GLN B 21 REMARK 465 LEU B 22 REMARK 465 HIS B 23 REMARK 465 GLY B 24 REMARK 465 ILE B 25 REMARK 465 GLN B 26 REMARK 465 GLN B 27 REMARK 465 VAL B 28 REMARK 465 LEU B 29 REMARK 465 LYS B 30 REMARK 465 ASP B 31 REMARK 465 CYS B 32 REMARK 465 ILE B 33 REMARK 465 VAL B 34 REMARK 465 HIS B 35 REMARK 465 LEU B 36 REMARK 465 CYS B 37 REMARK 465 ILE B 38 REMARK 465 SER B 39 REMARK 465 LYS B 40 REMARK 465 PRO B 41 REMARK 465 GLU B 42 REMARK 465 ARG B 43 REMARK 465 PRO B 44 REMARK 465 MET B 45 REMARK 465 LYS B 46 REMARK 465 PHE B 47 REMARK 465 LEU B 48 REMARK 465 ARG B 49 REMARK 465 GLU B 50 REMARK 465 HIS B 51 REMARK 465 PHE B 52 REMARK 465 GLU B 53 REMARK 465 LYS B 54 REMARK 465 LEU B 55 REMARK 465 GLU B 56 REMARK 465 LYS B 57 REMARK 465 GLU B 58 REMARK 465 GLU B 59 REMARK 465 ASN B 60 REMARK 465 ARG B 61 REMARK 465 GLN B 62 REMARK 465 ILE B 63 REMARK 465 LEU B 64 REMARK 465 ALA B 65 REMARK 465 ARG B 66 REMARK 465 GLN B 67 REMARK 465 LYS B 68 REMARK 465 SER B 69 REMARK 465 ASN B 70 REMARK 465 SER B 71 REMARK 465 GLN B 72 REMARK 465 SER B 73 REMARK 465 ASP B 74 REMARK 465 SER B 75 REMARK 465 HIS B 76 REMARK 465 ASP B 77 REMARK 465 GLU B 78 REMARK 465 GLU B 79 REMARK 465 VAL B 80 REMARK 465 SER B 81 REMARK 465 PRO B 82 REMARK 465 THR B 83 REMARK 465 PRO B 84 REMARK 465 PRO B 85 REMARK 465 ASN B 86 REMARK 465 PRO B 87 REMARK 465 VAL B 88 REMARK 465 VAL B 89 REMARK 465 LYS B 90 REMARK 465 ASN B 367 REMARK 465 ILE B 368 REMARK 465 GLN B 369 REMARK 465 ARG B 370 REMARK 465 TYR B 371 REMARK 465 ASN B 372 REMARK 465 SER B 373 REMARK 465 PHE B 374 REMARK 465 ILE B 375 REMARK 465 SER B 376 REMARK 465 LEU B 377 REMARK 465 THR B 378 REMARK 465 VAL B 379 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 ASP A 25 CG OD1 OD2 REMARK 470 LYS A 81 CD CE NZ REMARK 470 LYS A 105 CD CE NZ REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 ARG A 256 CD NE CZ NH1 NH2 REMARK 470 LYS A 309 CE NZ REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 LYS B 121 CD CE NZ REMARK 470 LYS B 128 CE NZ REMARK 470 GLN B 177 CD OE1 NE2 REMARK 470 LYS B 279 CE NZ REMARK 470 ARG B 303 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG B 241 OE2 GLU B 245 1.79 REMARK 500 O ALA A 124 ND2 ASN A 326 1.91 REMARK 500 OG1 THR A 51 NH2 ARG B 94 2.13 REMARK 500 NH2 ARG A 194 O LYS A 213 2.14 REMARK 500 OG SER B 305 OD1 ASN B 307 2.16 REMARK 500 O VAL B 184 OE1 GLU B 187 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 141 C - N - CA ANGL. DEV. = -14.1 DEGREES REMARK 500 HIS A 142 N - CA - CB ANGL. DEV. = 11.2 DEGREES REMARK 500 ASN B 133 N - CA - C ANGL. DEV. = -20.6 DEGREES REMARK 500 PRO B 153 C - N - CA ANGL. DEV. = 11.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 32 77.18 -116.97 REMARK 500 PHE A 54 -70.73 -118.03 REMARK 500 GLU A 64 -72.30 -58.68 REMARK 500 GLU A 107 -52.14 -120.55 REMARK 500 ASP A 112 -163.71 -120.44 REMARK 500 ARG A 137 159.41 177.78 REMARK 500 ASP A 166 40.22 -143.19 REMARK 500 ASP A 184 76.79 64.71 REMARK 500 CYS A 199 149.56 179.97 REMARK 500 PHE A 327 -178.64 -69.89 REMARK 500 SER B 131 -121.36 37.16 REMARK 500 ASN B 185 39.29 39.89 REMARK 500 VAL B 189 -69.98 -128.02 REMARK 500 LEU B 221 159.13 177.82 REMARK 500 ILE B 280 -49.80 -134.77 REMARK 500 THR B 294 -61.21 -107.16 REMARK 500 PRO B 306 52.45 -94.20 REMARK 500 GLU B 309 -172.87 -62.05 REMARK 500 PRO B 318 179.15 -50.60 REMARK 500 LEU B 329 171.16 175.21 REMARK 500 REMARK 500 REMARK: NULL DBREF 9O7V A 1 350 UNP P05132 KAPCA_MOUSE 2 351 DBREF 9O7V B -1 379 UNP P31321 KAP1_HUMAN 1 381 SEQRES 1 A 350 GLY ASN ALA ALA ALA ALA LYS LYS GLY SER GLU GLN GLU SEQRES 2 A 350 SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU ASP PHE SEQRES 3 A 350 LEU LYS LYS TRP GLU THR PRO SER GLN ASN THR ALA GLN SEQRES 4 A 350 LEU ASP GLN PHE ASP ARG ILE LYS THR LEU GLY THR GLY SEQRES 5 A 350 SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS GLU SER SEQRES 6 A 350 GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN LYS SEQRES 7 A 350 VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN GLU SEQRES 8 A 350 LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU VAL SEQRES 9 A 350 LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU TYR SEQRES 10 A 350 MET VAL MET GLU TYR VAL ALA GLY GLY GLU MET PHE SER SEQRES 11 A 350 HIS LEU ARG ARG ILE GLY ARG PHE SER GLU PRO HIS ALA SEQRES 12 A 350 ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU TYR SEQRES 13 A 350 LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS PRO SEQRES 14 A 350 GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE GLN VAL SEQRES 15 A 350 THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG THR SEQRES 16 A 350 TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO GLU SEQRES 17 A 350 ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP TRP SEQRES 18 A 350 TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA GLY SEQRES 19 A 350 TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN ILE TYR SEQRES 20 A 350 GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER HIS SEQRES 21 A 350 PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU LEU SEQRES 22 A 350 GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS ASN SEQRES 23 A 350 GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA THR SEQRES 24 A 350 THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU ALA SEQRES 25 A 350 PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SER SEQRES 26 A 350 ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEP SEQRES 27 A 350 ILE ASN GLU LYS CYS GLY LYS GLU PHE THR GLU PHE SEQRES 1 B 381 MET ALA SER PRO PRO ALA CYS PRO SER GLU GLU ASP GLU SEQRES 2 B 381 SER LEU LYS GLY CYS GLU LEU TYR VAL GLN LEU HIS GLY SEQRES 3 B 381 ILE GLN GLN VAL LEU LYS ASP CYS ILE VAL HIS LEU CYS SEQRES 4 B 381 ILE SER LYS PRO GLU ARG PRO MET LYS PHE LEU ARG GLU SEQRES 5 B 381 HIS PHE GLU LYS LEU GLU LYS GLU GLU ASN ARG GLN ILE SEQRES 6 B 381 LEU ALA ARG GLN LYS SER ASN SER GLN SER ASP SER HIS SEQRES 7 B 381 ASP GLU GLU VAL SER PRO THR PRO PRO ASN PRO VAL VAL SEQRES 8 B 381 LYS ALA ARG ARG ARG ARG GLY GLY VAL SER ALA GLU VAL SEQRES 9 B 381 TYR THR GLU GLU ASP ALA VAL SER TYR VAL ARG LYS VAL SEQRES 10 B 381 ILE PRO LYS ASP TYR LYS THR MET THR ALA LEU ALA LYS SEQRES 11 B 381 ALA ILE SER LYS ASN VAL LEU PHE ALA HIS LEU ASP ASP SEQRES 12 B 381 ASN GLU ARG SER ASP ILE PHE ASP ALA MET PHE PRO VAL SEQRES 13 B 381 THR HIS ILE ALA GLY GLU THR VAL ILE GLN GLN GLY ASN SEQRES 14 B 381 GLU GLY ASP ASN PHE TYR VAL VAL ASP GLN GLY GLU VAL SEQRES 15 B 381 ASP VAL TYR VAL ASN GLY GLU TRP VAL THR ASN ILE SER SEQRES 16 B 381 GLU GLY GLY SER PHE GLY GLU LEU ALA LEU ILE TYR GLY SEQRES 17 B 381 THR PRO ARG ALA ALA THR VAL LYS ALA LYS THR ASP LEU SEQRES 18 B 381 LYS LEU TRP GLY ILE ASP ARG ASP SER TYR ARG ARG ILE SEQRES 19 B 381 LEU MET GLY SER THR LEU ARG LYS ARG LYS MET TYR GLU SEQRES 20 B 381 GLU PHE LEU SER LYS VAL SER ILE LEU GLU SER LEU GLU SEQRES 21 B 381 LYS TRP GLU ARG LEU THR VAL ALA ASP ALA LEU GLU PRO SEQRES 22 B 381 VAL GLN PHE GLU ASP GLY GLU LYS ILE VAL VAL GLN GLY SEQRES 23 B 381 GLU PRO GLY ASP ASP PHE TYR ILE ILE THR GLU GLY THR SEQRES 24 B 381 ALA SER VAL LEU GLN ARG ARG SER PRO ASN GLU GLU TYR SEQRES 25 B 381 VAL GLU VAL GLY ARG LEU GLY PRO SER ASP TYR PHE GLY SEQRES 26 B 381 GLU ILE ALA LEU LEU LEU ASN ARG PRO ARG ALA ALA THR SEQRES 27 B 381 VAL VAL ALA ARG GLY PRO LEU LYS CYS VAL LYS LEU ASP SEQRES 28 B 381 ARG PRO ARG PHE GLU ARG VAL LEU GLY PRO CYS SER GLU SEQRES 29 B 381 ILE LEU LYS ARG ASN ILE GLN ARG TYR ASN SER PHE ILE SEQRES 30 B 381 SER LEU THR VAL MODRES 9O7V TPO A 197 THR MODIFIED RESIDUE MODRES 9O7V SEP A 338 SER MODIFIED RESIDUE HET TPO A 197 11 HET SEP A 338 10 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP C3 H8 N O6 P HELIX 1 AA1 SER A 14 THR A 32 1 19 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 GLN A 96 1 13 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SER A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 GLY A 253 1 12 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 VAL A 288 ASN A 293 1 6 HELIX 14 AB5 HIS A 294 ALA A 298 5 5 HELIX 15 AB6 ASP A 301 GLN A 307 1 7 HELIX 16 AB7 THR B 104 SER B 110 1 7 HELIX 17 AB8 ASP B 119 SER B 131 1 13 HELIX 18 AB9 ASN B 133 HIS B 138 1 6 HELIX 19 AC1 ASP B 140 MET B 151 1 12 HELIX 20 AC2 GLU B 200 TYR B 205 1 6 HELIX 21 AC3 ARG B 226 LYS B 250 1 25 HELIX 22 AC4 VAL B 251 GLU B 255 5 5 HELIX 23 AC5 GLU B 258 LEU B 269 1 12 HELIX 24 AC6 GLU B 324 LEU B 328 5 5 HELIX 25 AC7 ARG B 350 GLY B 358 1 9 HELIX 26 AC8 PRO B 359 ARG B 366 1 8 SHEET 1 AA1 5 PHE A 43 THR A 51 0 SHEET 2 AA1 5 ARG A 56 HIS A 62 -1 O VAL A 57 N GLY A 50 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O TYR A 69 N VAL A 60 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O LEU A 116 N LEU A 74 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N PHE A 110 O TYR A 117 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 SHEET 1 AA4 2 CYS A 199 GLY A 200 0 SHEET 2 AA4 2 VAL B 98 SER B 99 -1 O VAL B 98 N GLY A 200 SHEET 1 AA5 4 PHE B 152 HIS B 156 0 SHEET 2 AA5 4 THR B 212 ASP B 225 -1 O LEU B 219 N HIS B 156 SHEET 3 AA5 4 ASN B 171 VAL B 184 -1 N TYR B 183 O THR B 212 SHEET 4 AA5 4 GLU B 187 ILE B 192 -1 O ILE B 192 N VAL B 180 SHEET 1 AA6 4 THR B 161 ILE B 163 0 SHEET 2 AA6 4 THR B 212 ASP B 225 -1 O VAL B 213 N ILE B 163 SHEET 3 AA6 4 ASN B 171 VAL B 184 -1 N TYR B 183 O THR B 212 SHEET 4 AA6 4 SER B 197 PHE B 198 -1 O PHE B 198 N TYR B 173 SHEET 1 AA7 4 GLU B 270 PHE B 274 0 SHEET 2 AA7 4 THR B 336 ASP B 349 -1 O LEU B 343 N PHE B 274 SHEET 3 AA7 4 ASP B 289 GLN B 302 -1 N GLU B 295 O LYS B 344 SHEET 4 AA7 4 VAL B 311 LEU B 316 -1 O VAL B 311 N GLN B 302 SHEET 1 AA8 4 GLU B 270 PHE B 274 0 SHEET 2 AA8 4 THR B 336 ASP B 349 -1 O LEU B 343 N PHE B 274 SHEET 3 AA8 4 ASP B 289 GLN B 302 -1 N GLU B 295 O LYS B 344 SHEET 4 AA8 4 ASP B 320 PHE B 322 -1 O ASP B 320 N ILE B 293 LINK C TRP A 196 N TPO A 197 1555 1555 1.34 LINK C TPO A 197 N LEU A 198 1555 1555 1.32 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 CRYST1 103.497 103.497 313.382 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009662 0.005578 0.000000 0.00000 SCALE2 0.000000 0.011157 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003191 0.00000 HETATM 1501 N TPO A 197 -22.204 -36.936 -3.701 1.00108.37 N HETATM 1502 CA TPO A 197 -22.984 -38.003 -4.356 1.00 98.12 C HETATM 1503 CB TPO A 197 -23.460 -37.597 -5.696 1.00 97.65 C HETATM 1504 CG2 TPO A 197 -24.574 -38.531 -6.146 1.00105.19 C HETATM 1505 OG1 TPO A 197 -23.787 -36.225 -5.757 1.00115.50 O HETATM 1506 P TPO A 197 -22.591 -35.656 -6.654 1.00115.04 P HETATM 1507 O1P TPO A 197 -22.563 -36.191 -8.038 1.00102.92 O HETATM 1508 O2P TPO A 197 -21.284 -36.159 -5.883 1.00111.28 O HETATM 1509 O3P TPO A 197 -22.689 -34.058 -6.668 1.00109.90 O HETATM 1510 C TPO A 197 -22.212 -39.279 -4.485 1.00 94.19 C HETATM 1511 O TPO A 197 -21.148 -39.267 -5.067 1.00 87.80 O HETATM 2625 N SEP A 338 -43.473 -40.504 -27.031 1.00201.27 N HETATM 2626 CA SEP A 338 -44.827 -40.076 -26.687 1.00195.22 C HETATM 2627 CB SEP A 338 -44.909 -39.871 -25.165 1.00191.82 C HETATM 2628 OG SEP A 338 -46.115 -39.257 -24.741 1.00192.01 O HETATM 2629 C SEP A 338 -45.063 -38.795 -27.485 1.00189.88 C HETATM 2630 O SEP A 338 -44.086 -38.159 -27.902 1.00187.96 O HETATM 2631 P SEP A 338 -47.301 -40.343 -24.646 1.00191.73 P HETATM 2632 O1P SEP A 338 -46.816 -41.701 -23.927 1.00191.94 O HETATM 2633 O2P SEP A 338 -48.482 -39.740 -23.739 1.00190.18 O HETATM 2634 O3P SEP A 338 -47.826 -40.685 -26.129 1.00185.61 O TER 2732 PHE A 350 TER 4904 ARG B 366 CONECT 1489 1501 CONECT 1501 1489 1502 CONECT 1502 1501 1503 1510 CONECT 1503 1502 1504 1505 CONECT 1504 1503 CONECT 1505 1503 1506 CONECT 1506 1505 1507 1508 1509 CONECT 1507 1506 CONECT 1508 1506 CONECT 1509 1506 CONECT 1510 1502 1511 1512 CONECT 1511 1510 CONECT 1512 1510 CONECT 2620 2625 CONECT 2625 2620 2626 CONECT 2626 2625 2627 2629 CONECT 2627 2626 2628 CONECT 2628 2627 2631 CONECT 2629 2626 2630 2635 CONECT 2630 2629 CONECT 2631 2628 2632 2633 2634 CONECT 2632 2631 CONECT 2633 2631 CONECT 2634 2631 CONECT 2635 2629 MASTER 452 0 2 26 27 0 0 6 4902 2 25 57 END