HEADER SPLICING 13-MAY-25 9OMB TITLE NRDJ-1 INTEIN NMR SOLUTION STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NRDJ-1 INTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MARINE METAGENOME; SOURCE 3 ORGANISM_TAXID: 408172; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS SPLICING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.PARVEEN,X.YE,S.CAHILL,T.W.MUIR,D.COWBURN REVDAT 1 20-MAY-26 9OMB 0 JRNL AUTH D.COWBURN,T.W.MUIR,S.CAHILL,N.PARVEEN,X.YE JRNL TITL NRDJ-1 INTEIN NMR SOLUTION STRUCTURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARTINA REMARK 3 AUTHORS : KLUKOWSKI, P., RIEK, R. AND GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9OMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-25. REMARK 100 THE DEPOSITION ID IS D_1000295828. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 12 MG/ML [U-100% 13C; U-100% REMARK 210 15N] NRDJ1, 90% H2O/10% D2O; 12 REMARK 210 MG/ML [U-100% 13C; U-100% 15N] REMARK 210 NRDJ1, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HN(CA)CO; 3D HNCA; REMARK 210 3D HN(CO)CA; 3D HNCACB; 3D REMARK 210 HN(COCA)CB; 3D HNHA; 3D HBHA(CO) REMARK 210 NH; 3D H(CCO)NH; 3D C(CO)NH; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D HCCH-COSY; 3D HCCH- REMARK 210 TOCSY; 3D CCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 800 MHZ; 900 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD; AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, ARTINA, NMRPIPE, CCPNMR REMARK 210 ANALYSIS REMARK 210 METHOD USED : CYANA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 6 154.90 -47.38 REMARK 500 1 ASP A 31 77.87 76.66 REMARK 500 1 LYS A 32 107.97 75.15 REMARK 500 1 ASN A 33 21.70 -164.85 REMARK 500 1 ALA A 38 -133.25 -87.40 REMARK 500 1 PHE A 39 124.71 -170.28 REMARK 500 1 ALA A 54 107.73 -168.32 REMARK 500 1 ARG A 58 113.46 -169.86 REMARK 500 1 CYS A 79 147.73 -170.61 REMARK 500 1 ARG A 90 -35.90 -131.41 REMARK 500 1 ALA A 111 -41.64 -146.47 REMARK 500 2 ASP A 31 76.16 77.97 REMARK 500 2 LYS A 32 110.61 74.78 REMARK 500 2 ASN A 33 21.99 -165.58 REMARK 500 2 ALA A 38 -133.86 -86.42 REMARK 500 2 PHE A 39 124.80 -170.20 REMARK 500 2 ALA A 54 108.17 -168.04 REMARK 500 2 ARG A 58 114.18 -170.03 REMARK 500 2 ARG A 90 -36.67 -131.40 REMARK 500 2 ALA A 111 -41.75 -144.10 REMARK 500 3 VAL A 6 159.52 -47.79 REMARK 500 3 ASP A 31 85.49 78.76 REMARK 500 3 LYS A 32 113.48 64.75 REMARK 500 3 ASN A 33 23.00 -168.72 REMARK 500 3 ALA A 38 -133.78 -86.85 REMARK 500 3 ALA A 54 108.01 -167.86 REMARK 500 3 ARG A 58 114.82 -171.91 REMARK 500 3 ARG A 90 -35.85 -131.10 REMARK 500 3 ALA A 111 -41.07 -144.50 REMARK 500 3 SER A 125 177.30 -59.45 REMARK 500 4 VAL A 6 156.89 -48.61 REMARK 500 4 ASP A 31 79.71 82.73 REMARK 500 4 LYS A 32 119.12 65.54 REMARK 500 4 ASN A 33 25.65 -172.49 REMARK 500 4 ALA A 38 -133.67 -86.82 REMARK 500 4 PHE A 39 124.61 -170.28 REMARK 500 4 ALA A 54 107.94 -168.25 REMARK 500 4 ARG A 58 115.26 -170.92 REMARK 500 4 ARG A 90 -36.15 -131.28 REMARK 500 4 ALA A 111 -42.78 -143.51 REMARK 500 5 VAL A 6 162.81 -48.76 REMARK 500 5 ASP A 31 77.78 76.75 REMARK 500 5 LYS A 32 108.15 74.58 REMARK 500 5 ASN A 33 21.49 -163.77 REMARK 500 5 ALA A 38 -132.59 -88.89 REMARK 500 5 PHE A 39 126.09 -170.49 REMARK 500 5 ALA A 54 107.43 -167.80 REMARK 500 5 ARG A 58 113.73 -169.49 REMARK 500 5 ARG A 90 -36.05 -132.23 REMARK 500 5 ALA A 111 -41.76 -143.70 REMARK 500 REMARK 500 THIS ENTRY HAS 205 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 31244 RELATED DB: BMRB REMARK 900 NRDJ-1 INTEIN NMR SOLUTION STRUCTURE DBREF 9OMB A 1 151 PDB 9OMB 9OMB 1 151 SEQRES 1 A 151 SER GLY GLY ALA LEU VAL GLY SER SER GLU ILE ILE THR SEQRES 2 A 151 ARG ASN TYR GLY LYS THR THR ILE LYS GLU VAL VAL GLU SEQRES 3 A 151 ILE PHE ASP ASN ASP LYS ASN ILE GLN VAL LEU ALA PHE SEQRES 4 A 151 ASN THR HIS THR ASP ASN ILE GLU TRP ALA PRO ILE LYS SEQRES 5 A 151 ALA ALA GLN LEU THR ARG PRO ASN ALA GLU LEU VAL GLU SEQRES 6 A 151 LEU GLU ILE ASP THR LEU HIS GLY VAL LYS THR ILE ARG SEQRES 7 A 151 CYS THR PRO ASP HIS PRO VAL TYR THR LYS ASN ARG GLY SEQRES 8 A 151 TYR VAL ARG ALA ASP GLU LEU THR ASP ASP ASP GLU LEU SEQRES 9 A 151 VAL VAL ALA ILE MET GLU ALA LYS THR TYR ILE GLY LYS SEQRES 10 A 151 LEU LYS SER ARG LYS ILE VAL SER ASN GLU ASP THR TYR SEQRES 11 A 151 ASP ILE GLN THR SER THR HIS ASN PHE PHE ALA ASN ASP SEQRES 12 A 151 ILE LEU VAL HIS ALA SER GLU ILE HELIX 1 AA1 ILE A 21 VAL A 25 1 5 HELIX 2 AA2 GLU A 26 ASP A 31 1 6 HELIX 3 AA3 ASP A 96 LEU A 98 5 3 SHEET 1 AA1 4 ALA A 4 VAL A 6 0 SHEET 2 AA1 4 VAL A 124 THR A 134 -1 O TYR A 130 N LEU A 5 SHEET 3 AA1 4 TRP A 48 ASP A 69 -1 N GLN A 55 O ASP A 131 SHEET 4 AA1 4 VAL A 74 CYS A 79 -1 O ILE A 77 N LEU A 66 SHEET 1 AA2 4 GLN A 35 LEU A 37 0 SHEET 2 AA2 4 TRP A 48 ASP A 69 -1 O ALA A 49 N VAL A 36 SHEET 3 AA2 4 LYS A 112 ARG A 121 -1 O SER A 120 N GLU A 67 SHEET 4 AA2 4 GLU A 103 ILE A 108 -1 N ILE A 108 O LYS A 112 SHEET 1 AA3 2 GLU A 10 ILE A 12 0 SHEET 2 AA3 2 LYS A 18 THR A 20 -1 O THR A 19 N ILE A 11 SHEET 1 AA4 2 PRO A 84 THR A 87 0 SHEET 2 AA4 2 GLY A 91 ARG A 94 -1 O GLY A 91 N THR A 87 SHEET 1 AA5 2 PHE A 139 PHE A 140 0 SHEET 2 AA5 2 LEU A 145 VAL A 146 -1 O VAL A 146 N PHE A 139 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MODEL 16 ENDMDL MODEL 17 ENDMDL MODEL 18 ENDMDL MODEL 19 ENDMDL MODEL 20 ENDMDL MASTER 150 0 0 3 14 0 0 6 1191 1 0 12 END