data_9PDZ # _entry.id 9PDZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9PDZ pdb_00009pdz 10.2210/pdb9pdz/pdb WWPDB D_1000296359 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-07-22 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9PDZ _pdbx_database_status.recvd_initial_deposition_date 2025-07-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email ian.paulsen@mq.edu.au _pdbx_contact_author.name_first Ian _pdbx_contact_author.name_last Paulsen _pdbx_contact_author.name_mi T _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9015-9418 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shah, B.S.' 1 0000-0001-8968-440X 'Orr, C.M.' 2 0000-0002-6137-8969 'Mikolajek, H.' 3 0000-0003-0776-9974 'Mykhaylyk, V.' 4 0000-0003-0106-2724 'Owens, R.J.' 5 0000-0002-3705-2993 'Paulsen, I.T.' 6 0000-0001-9015-9418 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of a Spermidine binding protein isolated from Synechococcus CC9311' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shah, B.S.' 1 0000-0001-8968-440X primary 'Mikolajek, H.' 2 0000-0003-0776-9974 primary 'Mykhaylyk, V.' 3 0000-0003-0106-2724 primary 'Orr, C.M.' 4 0000-0002-6137-8969 primary 'Owens, R.J.' 5 0000-0002-3705-2993 primary 'Paulsen, I.T.' 6 0000-0001-9015-9418 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Periplasmic binding protein-like II superfamily protein' 33264.492 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 8 ? ? ? ? 3 non-polymer syn SPERMIDINE 145.246 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 5 water nat water 18.015 234 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SPIMRAPTKTLPAPWQKQLKAPWRITELKAFVSSDPPWLSSTDLLTIGDGWLSNLNPGSFQAIDAAPLQSQLGPLAEQFL SELPTSWKGKIFPVGVSPWVLLFRGEPALKDQASNSWDVLLDPEFKGKVLLPSSPRLVMSLAEHMQTPDALRRLRQAAIS FDDRHALNWLLQGDAQVAVLPLQRSMGALLRDQRLHAVLPAQGAPLNWTLMLRPSSSKEPLPQDWVKKAWEEPLLSRLLS AGWVPPLARSKLSTAMSRVPKRLHALVLPSNEIWQSCWNLAPLDPSEQDALKAKWKASA ; _entity_poly.pdbx_seq_one_letter_code_can ;SPIMRAPTKTLPAPWQKQLKAPWRITELKAFVSSDPPWLSSTDLLTIGDGWLSNLNPGSFQAIDAAPLQSQLGPLAEQFL SELPTSWKGKIFPVGVSPWVLLFRGEPALKDQASNSWDVLLDPEFKGKVLLPSSPRLVMSLAEHMQTPDALRRLRQAAIS FDDRHALNWLLQGDAQVAVLPLQRSMGALLRDQRLHAVLPAQGAPLNWTLMLRPSSSKEPLPQDWVKKAWEEPLLSRLLS AGWVPPLARSKLSTAMSRVPKRLHALVLPSNEIWQSCWNLAPLDPSEQDALKAKWKASA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 SPERMIDINE SPD 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PRO n 1 3 ILE n 1 4 MET n 1 5 ARG n 1 6 ALA n 1 7 PRO n 1 8 THR n 1 9 LYS n 1 10 THR n 1 11 LEU n 1 12 PRO n 1 13 ALA n 1 14 PRO n 1 15 TRP n 1 16 GLN n 1 17 LYS n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 ALA n 1 22 PRO n 1 23 TRP n 1 24 ARG n 1 25 ILE n 1 26 THR n 1 27 GLU n 1 28 LEU n 1 29 LYS n 1 30 ALA n 1 31 PHE n 1 32 VAL n 1 33 SER n 1 34 SER n 1 35 ASP n 1 36 PRO n 1 37 PRO n 1 38 TRP n 1 39 LEU n 1 40 SER n 1 41 SER n 1 42 THR n 1 43 ASP n 1 44 LEU n 1 45 LEU n 1 46 THR n 1 47 ILE n 1 48 GLY n 1 49 ASP n 1 50 GLY n 1 51 TRP n 1 52 LEU n 1 53 SER n 1 54 ASN n 1 55 LEU n 1 56 ASN n 1 57 PRO n 1 58 GLY n 1 59 SER n 1 60 PHE n 1 61 GLN n 1 62 ALA n 1 63 ILE n 1 64 ASP n 1 65 ALA n 1 66 ALA n 1 67 PRO n 1 68 LEU n 1 69 GLN n 1 70 SER n 1 71 GLN n 1 72 LEU n 1 73 GLY n 1 74 PRO n 1 75 LEU n 1 76 ALA n 1 77 GLU n 1 78 GLN n 1 79 PHE n 1 80 LEU n 1 81 SER n 1 82 GLU n 1 83 LEU n 1 84 PRO n 1 85 THR n 1 86 SER n 1 87 TRP n 1 88 LYS n 1 89 GLY n 1 90 LYS n 1 91 ILE n 1 92 PHE n 1 93 PRO n 1 94 VAL n 1 95 GLY n 1 96 VAL n 1 97 SER n 1 98 PRO n 1 99 TRP n 1 100 VAL n 1 101 LEU n 1 102 LEU n 1 103 PHE n 1 104 ARG n 1 105 GLY n 1 106 GLU n 1 107 PRO n 1 108 ALA n 1 109 LEU n 1 110 LYS n 1 111 ASP n 1 112 GLN n 1 113 ALA n 1 114 SER n 1 115 ASN n 1 116 SER n 1 117 TRP n 1 118 ASP n 1 119 VAL n 1 120 LEU n 1 121 LEU n 1 122 ASP n 1 123 PRO n 1 124 GLU n 1 125 PHE n 1 126 LYS n 1 127 GLY n 1 128 LYS n 1 129 VAL n 1 130 LEU n 1 131 LEU n 1 132 PRO n 1 133 SER n 1 134 SER n 1 135 PRO n 1 136 ARG n 1 137 LEU n 1 138 VAL n 1 139 MET n 1 140 SER n 1 141 LEU n 1 142 ALA n 1 143 GLU n 1 144 HIS n 1 145 MET n 1 146 GLN n 1 147 THR n 1 148 PRO n 1 149 ASP n 1 150 ALA n 1 151 LEU n 1 152 ARG n 1 153 ARG n 1 154 LEU n 1 155 ARG n 1 156 GLN n 1 157 ALA n 1 158 ALA n 1 159 ILE n 1 160 SER n 1 161 PHE n 1 162 ASP n 1 163 ASP n 1 164 ARG n 1 165 HIS n 1 166 ALA n 1 167 LEU n 1 168 ASN n 1 169 TRP n 1 170 LEU n 1 171 LEU n 1 172 GLN n 1 173 GLY n 1 174 ASP n 1 175 ALA n 1 176 GLN n 1 177 VAL n 1 178 ALA n 1 179 VAL n 1 180 LEU n 1 181 PRO n 1 182 LEU n 1 183 GLN n 1 184 ARG n 1 185 SER n 1 186 MET n 1 187 GLY n 1 188 ALA n 1 189 LEU n 1 190 LEU n 1 191 ARG n 1 192 ASP n 1 193 GLN n 1 194 ARG n 1 195 LEU n 1 196 HIS n 1 197 ALA n 1 198 VAL n 1 199 LEU n 1 200 PRO n 1 201 ALA n 1 202 GLN n 1 203 GLY n 1 204 ALA n 1 205 PRO n 1 206 LEU n 1 207 ASN n 1 208 TRP n 1 209 THR n 1 210 LEU n 1 211 MET n 1 212 LEU n 1 213 ARG n 1 214 PRO n 1 215 SER n 1 216 SER n 1 217 SER n 1 218 LYS n 1 219 GLU n 1 220 PRO n 1 221 LEU n 1 222 PRO n 1 223 GLN n 1 224 ASP n 1 225 TRP n 1 226 VAL n 1 227 LYS n 1 228 LYS n 1 229 ALA n 1 230 TRP n 1 231 GLU n 1 232 GLU n 1 233 PRO n 1 234 LEU n 1 235 LEU n 1 236 SER n 1 237 ARG n 1 238 LEU n 1 239 LEU n 1 240 SER n 1 241 ALA n 1 242 GLY n 1 243 TRP n 1 244 VAL n 1 245 PRO n 1 246 PRO n 1 247 LEU n 1 248 ALA n 1 249 ARG n 1 250 SER n 1 251 LYS n 1 252 LEU n 1 253 SER n 1 254 THR n 1 255 ALA n 1 256 MET n 1 257 SER n 1 258 ARG n 1 259 VAL n 1 260 PRO n 1 261 LYS n 1 262 ARG n 1 263 LEU n 1 264 HIS n 1 265 ALA n 1 266 LEU n 1 267 VAL n 1 268 LEU n 1 269 PRO n 1 270 SER n 1 271 ASN n 1 272 GLU n 1 273 ILE n 1 274 TRP n 1 275 GLN n 1 276 SER n 1 277 CYS n 1 278 TRP n 1 279 ASN n 1 280 LEU n 1 281 ALA n 1 282 PRO n 1 283 LEU n 1 284 ASP n 1 285 PRO n 1 286 SER n 1 287 GLU n 1 288 GLN n 1 289 ASP n 1 290 ALA n 1 291 LEU n 1 292 LYS n 1 293 ALA n 1 294 LYS n 1 295 TRP n 1 296 LYS n 1 297 ALA n 1 298 SER n 1 299 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 299 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene sync_2119 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Synechococcus sp. CC9311' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 64471 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Lemo21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SPD non-polymer . SPERMIDINE 'N-(2-AMINO-PROPYL)-1,4-DIAMINOBUTANE; PA(34)' 'C7 H19 N3' 145.246 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER A . n A 1 2 PRO 2 3 3 PRO PRO A . n A 1 3 ILE 3 4 4 ILE ILE A . n A 1 4 MET 4 5 5 MET MET A . n A 1 5 ARG 5 6 6 ARG ARG A . n A 1 6 ALA 6 7 7 ALA ALA A . n A 1 7 PRO 7 8 8 PRO PRO A . n A 1 8 THR 8 9 9 THR THR A . n A 1 9 LYS 9 10 10 LYS LYS A . n A 1 10 THR 10 11 11 THR THR A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 PRO 12 13 13 PRO PRO A . n A 1 13 ALA 13 14 14 ALA ALA A . n A 1 14 PRO 14 15 15 PRO PRO A . n A 1 15 TRP 15 16 16 TRP TRP A . n A 1 16 GLN 16 17 17 GLN GLN A . n A 1 17 LYS 17 18 18 LYS LYS A . n A 1 18 GLN 18 19 19 GLN GLN A . n A 1 19 LEU 19 20 20 LEU LEU A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 ALA 21 22 22 ALA ALA A . n A 1 22 PRO 22 23 23 PRO PRO A . n A 1 23 TRP 23 24 24 TRP TRP A . n A 1 24 ARG 24 25 25 ARG ARG A . n A 1 25 ILE 25 26 26 ILE ILE A . n A 1 26 THR 26 27 27 THR THR A . n A 1 27 GLU 27 28 28 GLU GLU A . n A 1 28 LEU 28 29 29 LEU LEU A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 ALA 30 31 31 ALA ALA A . n A 1 31 PHE 31 32 32 PHE PHE A . n A 1 32 VAL 32 33 33 VAL VAL A . n A 1 33 SER 33 34 34 SER SER A . n A 1 34 SER 34 35 35 SER SER A . n A 1 35 ASP 35 36 36 ASP ASP A . n A 1 36 PRO 36 37 37 PRO PRO A . n A 1 37 PRO 37 38 38 PRO PRO A . n A 1 38 TRP 38 39 39 TRP TRP A . n A 1 39 LEU 39 40 40 LEU LEU A . n A 1 40 SER 40 41 41 SER SER A . n A 1 41 SER 41 42 42 SER SER A . n A 1 42 THR 42 43 43 THR THR A . n A 1 43 ASP 43 44 44 ASP ASP A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 ILE 47 48 48 ILE ILE A . n A 1 48 GLY 48 49 49 GLY GLY A . n A 1 49 ASP 49 50 50 ASP ASP A . n A 1 50 GLY 50 51 51 GLY GLY A . n A 1 51 TRP 51 52 52 TRP TRP A . n A 1 52 LEU 52 53 53 LEU LEU A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 ASN 54 55 55 ASN ASN A . n A 1 55 LEU 55 56 56 LEU LEU A . n A 1 56 ASN 56 57 57 ASN ASN A . n A 1 57 PRO 57 58 58 PRO PRO A . n A 1 58 GLY 58 59 59 GLY GLY A . n A 1 59 SER 59 60 60 SER SER A . n A 1 60 PHE 60 61 61 PHE PHE A . n A 1 61 GLN 61 62 62 GLN GLN A . n A 1 62 ALA 62 63 63 ALA ALA A . n A 1 63 ILE 63 64 64 ILE ILE A . n A 1 64 ASP 64 65 65 ASP ASP A . n A 1 65 ALA 65 66 66 ALA ALA A . n A 1 66 ALA 66 67 67 ALA ALA A . n A 1 67 PRO 67 68 68 PRO PRO A . n A 1 68 LEU 68 69 69 LEU LEU A . n A 1 69 GLN 69 70 70 GLN GLN A . n A 1 70 SER 70 71 71 SER SER A . n A 1 71 GLN 71 72 72 GLN GLN A . n A 1 72 LEU 72 73 73 LEU LEU A . n A 1 73 GLY 73 74 74 GLY GLY A . n A 1 74 PRO 74 75 75 PRO PRO A . n A 1 75 LEU 75 76 76 LEU LEU A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 GLN 78 79 79 GLN GLN A . n A 1 79 PHE 79 80 80 PHE PHE A . n A 1 80 LEU 80 81 81 LEU LEU A . n A 1 81 SER 81 82 82 SER SER A . n A 1 82 GLU 82 83 83 GLU GLU A . n A 1 83 LEU 83 84 84 LEU LEU A . n A 1 84 PRO 84 85 85 PRO PRO A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 SER 86 87 87 SER SER A . n A 1 87 TRP 87 88 88 TRP TRP A . n A 1 88 LYS 88 89 89 LYS LYS A . n A 1 89 GLY 89 90 90 GLY GLY A . n A 1 90 LYS 90 91 91 LYS LYS A . n A 1 91 ILE 91 92 92 ILE ILE A . n A 1 92 PHE 92 93 93 PHE PHE A . n A 1 93 PRO 93 94 94 PRO PRO A . n A 1 94 VAL 94 95 95 VAL VAL A . n A 1 95 GLY 95 96 96 GLY GLY A . n A 1 96 VAL 96 97 97 VAL VAL A . n A 1 97 SER 97 98 98 SER SER A . n A 1 98 PRO 98 99 99 PRO PRO A . n A 1 99 TRP 99 100 100 TRP TRP A . n A 1 100 VAL 100 101 101 VAL VAL A . n A 1 101 LEU 101 102 102 LEU LEU A . n A 1 102 LEU 102 103 103 LEU LEU A . n A 1 103 PHE 103 104 104 PHE PHE A . n A 1 104 ARG 104 105 105 ARG ARG A . n A 1 105 GLY 105 106 106 GLY ALA A . n A 1 106 GLU 106 106 ? ? ? A A n A 1 107 PRO 107 106 ? ? ? A B n A 1 108 ALA 108 106 ? ? ? A C n A 1 109 LEU 109 106 ? ? ? A D n A 1 110 LYS 110 106 ? ? ? A E n A 1 111 ASP 111 106 ? ? ? A F n A 1 112 GLN 112 106 ? ? ? A G n A 1 113 ALA 113 106 ? ? ? A H n A 1 114 SER 114 110 110 SER SER A . n A 1 115 ASN 115 111 111 ASN ASN A . n A 1 116 SER 116 112 112 SER SER A . n A 1 117 TRP 117 113 113 TRP TRP A . n A 1 118 ASP 118 114 114 ASP ASP A . n A 1 119 VAL 119 115 115 VAL VAL A . n A 1 120 LEU 120 116 116 LEU LEU A . n A 1 121 LEU 121 117 117 LEU LEU A . n A 1 122 ASP 122 118 118 ASP ASP A . n A 1 123 PRO 123 119 119 PRO PRO A . n A 1 124 GLU 124 120 120 GLU GLU A . n A 1 125 PHE 125 121 121 PHE PHE A . n A 1 126 LYS 126 122 122 LYS LYS A . n A 1 127 GLY 127 123 123 GLY GLY A . n A 1 128 LYS 128 124 124 LYS LYS A . n A 1 129 VAL 129 125 125 VAL VAL A . n A 1 130 LEU 130 126 126 LEU LEU A . n A 1 131 LEU 131 127 127 LEU LEU A . n A 1 132 PRO 132 128 128 PRO PRO A . n A 1 133 SER 133 129 129 SER SER A . n A 1 134 SER 134 130 130 SER SER A . n A 1 135 PRO 135 131 131 PRO PRO A . n A 1 136 ARG 136 132 132 ARG ARG A . n A 1 137 LEU 137 133 133 LEU LEU A . n A 1 138 VAL 138 134 134 VAL VAL A . n A 1 139 MET 139 135 135 MET MET A . n A 1 140 SER 140 136 136 SER SER A . n A 1 141 LEU 141 137 137 LEU LEU A . n A 1 142 ALA 142 138 138 ALA ALA A . n A 1 143 GLU 143 139 139 GLU GLU A . n A 1 144 HIS 144 140 140 HIS HIS A . n A 1 145 MET 145 141 141 MET MET A . n A 1 146 GLN 146 142 142 GLN GLN A . n A 1 147 THR 147 143 143 THR THR A . n A 1 148 PRO 148 144 144 PRO PRO A . n A 1 149 ASP 149 145 145 ASP ASP A . n A 1 150 ALA 150 146 146 ALA ALA A . n A 1 151 LEU 151 147 147 LEU LEU A . n A 1 152 ARG 152 148 148 ARG ARG A . n A 1 153 ARG 153 149 149 ARG ARG A . n A 1 154 LEU 154 150 150 LEU LEU A . n A 1 155 ARG 155 151 151 ARG ARG A . n A 1 156 GLN 156 152 152 GLN GLN A . n A 1 157 ALA 157 153 153 ALA ALA A . n A 1 158 ALA 158 154 154 ALA ALA A . n A 1 159 ILE 159 155 155 ILE ILE A . n A 1 160 SER 160 156 156 SER SER A . n A 1 161 PHE 161 157 157 PHE PHE A . n A 1 162 ASP 162 158 158 ASP ASP A . n A 1 163 ASP 163 159 159 ASP ASP A . n A 1 164 ARG 164 160 160 ARG ARG A . n A 1 165 HIS 165 161 161 HIS HIS A . n A 1 166 ALA 166 162 162 ALA ALA A . n A 1 167 LEU 167 163 163 LEU LEU A . n A 1 168 ASN 168 164 164 ASN ASN A . n A 1 169 TRP 169 165 165 TRP TRP A . n A 1 170 LEU 170 166 166 LEU LEU A . n A 1 171 LEU 171 167 167 LEU LEU A . n A 1 172 GLN 172 168 168 GLN GLN A . n A 1 173 GLY 173 169 169 GLY GLY A . n A 1 174 ASP 174 170 170 ASP ASP A . n A 1 175 ALA 175 171 171 ALA ALA A . n A 1 176 GLN 176 172 172 GLN GLN A . n A 1 177 VAL 177 173 173 VAL VAL A . n A 1 178 ALA 178 174 174 ALA ALA A . n A 1 179 VAL 179 175 175 VAL VAL A . n A 1 180 LEU 180 176 176 LEU LEU A . n A 1 181 PRO 181 177 177 PRO PRO A . n A 1 182 LEU 182 178 178 LEU LEU A . n A 1 183 GLN 183 179 179 GLN GLN A . n A 1 184 ARG 184 180 180 ARG ARG A . n A 1 185 SER 185 181 181 SER SER A . n A 1 186 MET 186 182 182 MET MET A . n A 1 187 GLY 187 183 183 GLY GLY A . n A 1 188 ALA 188 184 184 ALA ALA A . n A 1 189 LEU 189 185 185 LEU LEU A . n A 1 190 LEU 190 186 186 LEU LEU A . n A 1 191 ARG 191 187 187 ARG ARG A . n A 1 192 ASP 192 188 188 ASP ASP A . n A 1 193 GLN 193 189 189 GLN GLN A . n A 1 194 ARG 194 190 190 ARG ARG A . n A 1 195 LEU 195 191 191 LEU LEU A . n A 1 196 HIS 196 192 192 HIS HIS A . n A 1 197 ALA 197 193 193 ALA ALA A . n A 1 198 VAL 198 194 194 VAL VAL A . n A 1 199 LEU 199 195 195 LEU LEU A . n A 1 200 PRO 200 196 196 PRO PRO A . n A 1 201 ALA 201 197 197 ALA ALA A . n A 1 202 GLN 202 198 198 GLN GLN A . n A 1 203 GLY 203 199 199 GLY GLY A . n A 1 204 ALA 204 200 200 ALA ALA A . n A 1 205 PRO 205 201 201 PRO PRO A . n A 1 206 LEU 206 202 202 LEU LEU A . n A 1 207 ASN 207 203 203 ASN ASN A . n A 1 208 TRP 208 204 204 TRP TRP A . n A 1 209 THR 209 205 205 THR THR A . n A 1 210 LEU 210 206 206 LEU LEU A . n A 1 211 MET 211 207 207 MET MET A . n A 1 212 LEU 212 208 208 LEU LEU A . n A 1 213 ARG 213 209 209 ARG ARG A . n A 1 214 PRO 214 210 210 PRO PRO A . n A 1 215 SER 215 211 211 SER SER A . n A 1 216 SER 216 212 212 SER SER A . n A 1 217 SER 217 213 213 SER SER A . n A 1 218 LYS 218 214 214 LYS LYS A . n A 1 219 GLU 219 215 215 GLU GLU A . n A 1 220 PRO 220 216 216 PRO PRO A . n A 1 221 LEU 221 217 217 LEU LEU A . n A 1 222 PRO 222 218 218 PRO PRO A . n A 1 223 GLN 223 219 219 GLN GLN A . n A 1 224 ASP 224 220 220 ASP ASP A . n A 1 225 TRP 225 221 221 TRP TRP A . n A 1 226 VAL 226 222 222 VAL VAL A . n A 1 227 LYS 227 223 223 LYS LYS A . n A 1 228 LYS 228 224 224 LYS LYS A . n A 1 229 ALA 229 225 225 ALA ALA A . n A 1 230 TRP 230 226 226 TRP TRP A . n A 1 231 GLU 231 227 227 GLU GLU A . n A 1 232 GLU 232 228 228 GLU GLU A . n A 1 233 PRO 233 229 229 PRO PRO A . n A 1 234 LEU 234 230 230 LEU LEU A . n A 1 235 LEU 235 231 231 LEU LEU A . n A 1 236 SER 236 232 232 SER SER A . n A 1 237 ARG 237 233 233 ARG ARG A . n A 1 238 LEU 238 234 234 LEU LEU A . n A 1 239 LEU 239 235 235 LEU LEU A . n A 1 240 SER 240 236 236 SER SER A . n A 1 241 ALA 241 237 237 ALA ALA A . n A 1 242 GLY 242 238 238 GLY GLY A . n A 1 243 TRP 243 239 239 TRP TRP A . n A 1 244 VAL 244 240 240 VAL VAL A . n A 1 245 PRO 245 241 241 PRO PRO A . n A 1 246 PRO 246 242 242 PRO PRO A . n A 1 247 LEU 247 243 243 LEU LEU A . n A 1 248 ALA 248 244 244 ALA ALA A . n A 1 249 ARG 249 245 245 ARG ARG A . n A 1 250 SER 250 246 246 SER SER A . n A 1 251 LYS 251 247 247 LYS LYS A . n A 1 252 LEU 252 248 248 LEU LEU A . n A 1 253 SER 253 249 249 SER SER A . n A 1 254 THR 254 250 250 THR THR A . n A 1 255 ALA 255 251 251 ALA ALA A . n A 1 256 MET 256 252 252 MET MET A . n A 1 257 SER 257 253 253 SER SER A . n A 1 258 ARG 258 254 254 ARG ARG A . n A 1 259 VAL 259 255 255 VAL VAL A . n A 1 260 PRO 260 256 256 PRO PRO A . n A 1 261 LYS 261 257 257 LYS LYS A . n A 1 262 ARG 262 258 258 ARG ARG A . n A 1 263 LEU 263 259 259 LEU LEU A . n A 1 264 HIS 264 260 260 HIS HIS A . n A 1 265 ALA 265 261 261 ALA ALA A . n A 1 266 LEU 266 262 262 LEU LEU A . n A 1 267 VAL 267 263 263 VAL VAL A . n A 1 268 LEU 268 264 264 LEU LEU A . n A 1 269 PRO 269 265 265 PRO PRO A . n A 1 270 SER 270 266 266 SER SER A . n A 1 271 ASN 271 267 267 ASN ASN A . n A 1 272 GLU 272 268 268 GLU GLU A . n A 1 273 ILE 273 269 269 ILE ILE A . n A 1 274 TRP 274 270 270 TRP TRP A . n A 1 275 GLN 275 271 271 GLN GLN A . n A 1 276 SER 276 272 272 SER SER A . n A 1 277 CYS 277 273 273 CYS CYS A . n A 1 278 TRP 278 274 274 TRP TRP A . n A 1 279 ASN 279 275 275 ASN ASN A . n A 1 280 LEU 280 276 276 LEU LEU A . n A 1 281 ALA 281 277 277 ALA ALA A . n A 1 282 PRO 282 278 278 PRO PRO A . n A 1 283 LEU 283 279 279 LEU LEU A . n A 1 284 ASP 284 280 280 ASP ASP A . n A 1 285 PRO 285 281 281 PRO PRO A . n A 1 286 SER 286 282 282 SER SER A . n A 1 287 GLU 287 283 283 GLU GLU A . n A 1 288 GLN 288 284 284 GLN GLN A . n A 1 289 ASP 289 285 285 ASP ASP A . n A 1 290 ALA 290 286 286 ALA ALA A . n A 1 291 LEU 291 287 287 LEU LEU A . n A 1 292 LYS 292 288 288 LYS LYS A . n A 1 293 ALA 293 289 289 ALA ALA A . n A 1 294 LYS 294 290 290 LYS LYS A . n A 1 295 TRP 295 291 291 TRP TRP A . n A 1 296 LYS 296 292 292 LYS LYS A . n A 1 297 ALA 297 293 293 ALA ALA A . n A 1 298 SER 298 294 294 SER SER A . n A 1 299 ALA 299 295 295 ALA ALA A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id SPD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id SPD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 301 400 EDO EDO A . C 2 EDO 1 302 403 EDO EDO A . D 2 EDO 1 303 404 EDO EDO A . E 2 EDO 1 304 405 EDO EDO A . F 2 EDO 1 305 408 EDO EDO A . G 2 EDO 1 306 410 EDO EDO A . H 2 EDO 1 307 411 EDO EDO A . I 3 SPD 1 308 412 SPD SPD A . J 2 EDO 1 309 413 EDO EDO A . K 4 CL 1 310 1 CL CL A . L 4 CL 1 311 2 CL CL A . M 4 CL 1 312 3 CL CL A . N 5 HOH 1 401 75 HOH HOH A . N 5 HOH 2 402 272 HOH HOH A . N 5 HOH 3 403 283 HOH HOH A . N 5 HOH 4 404 66 HOH HOH A . N 5 HOH 5 405 74 HOH HOH A . N 5 HOH 6 406 246 HOH HOH A . N 5 HOH 7 407 82 HOH HOH A . N 5 HOH 8 408 68 HOH HOH A . N 5 HOH 9 409 71 HOH HOH A . N 5 HOH 10 410 245 HOH HOH A . N 5 HOH 11 411 271 HOH HOH A . N 5 HOH 12 412 263 HOH HOH A . N 5 HOH 13 413 234 HOH HOH A . N 5 HOH 14 414 261 HOH HOH A . N 5 HOH 15 415 223 HOH HOH A . N 5 HOH 16 416 92 HOH HOH A . N 5 HOH 17 417 98 HOH HOH A . N 5 HOH 18 418 155 HOH HOH A . N 5 HOH 19 419 226 HOH HOH A . N 5 HOH 20 420 210 HOH HOH A . N 5 HOH 21 421 238 HOH HOH A . N 5 HOH 22 422 187 HOH HOH A . N 5 HOH 23 423 164 HOH HOH A . N 5 HOH 24 424 268 HOH HOH A . N 5 HOH 25 425 67 HOH HOH A . N 5 HOH 26 426 227 HOH HOH A . N 5 HOH 27 427 118 HOH HOH A . N 5 HOH 28 428 141 HOH HOH A . N 5 HOH 29 429 193 HOH HOH A . N 5 HOH 30 430 110 HOH HOH A . N 5 HOH 31 431 159 HOH HOH A . N 5 HOH 32 432 230 HOH HOH A . N 5 HOH 33 433 54 HOH HOH A . N 5 HOH 34 434 170 HOH HOH A . N 5 HOH 35 435 35 HOH HOH A . N 5 HOH 36 436 23 HOH HOH A . N 5 HOH 37 437 18 HOH HOH A . N 5 HOH 38 438 165 HOH HOH A . N 5 HOH 39 439 38 HOH HOH A . N 5 HOH 40 440 266 HOH HOH A . N 5 HOH 41 441 114 HOH HOH A . N 5 HOH 42 442 204 HOH HOH A . N 5 HOH 43 443 120 HOH HOH A . N 5 HOH 44 444 131 HOH HOH A . N 5 HOH 45 445 166 HOH HOH A . N 5 HOH 46 446 115 HOH HOH A . N 5 HOH 47 447 46 HOH HOH A . N 5 HOH 48 448 53 HOH HOH A . N 5 HOH 49 449 78 HOH HOH A . N 5 HOH 50 450 20 HOH HOH A . N 5 HOH 51 451 111 HOH HOH A . N 5 HOH 52 452 19 HOH HOH A . N 5 HOH 53 453 39 HOH HOH A . N 5 HOH 54 454 168 HOH HOH A . N 5 HOH 55 455 52 HOH HOH A . N 5 HOH 56 456 135 HOH HOH A . N 5 HOH 57 457 100 HOH HOH A . N 5 HOH 58 458 218 HOH HOH A . N 5 HOH 59 459 47 HOH HOH A . N 5 HOH 60 460 43 HOH HOH A . N 5 HOH 61 461 87 HOH HOH A . N 5 HOH 62 462 255 HOH HOH A . N 5 HOH 63 463 253 HOH HOH A . N 5 HOH 64 464 94 HOH HOH A . N 5 HOH 65 465 128 HOH HOH A . N 5 HOH 66 466 125 HOH HOH A . N 5 HOH 67 467 45 HOH HOH A . N 5 HOH 68 468 129 HOH HOH A . N 5 HOH 69 469 55 HOH HOH A . N 5 HOH 70 470 145 HOH HOH A . N 5 HOH 71 471 190 HOH HOH A . N 5 HOH 72 472 1 HOH HOH A . N 5 HOH 73 473 16 HOH HOH A . N 5 HOH 74 474 150 HOH HOH A . N 5 HOH 75 475 241 HOH HOH A . N 5 HOH 76 476 40 HOH HOH A . N 5 HOH 77 477 8 HOH HOH A . N 5 HOH 78 478 133 HOH HOH A . N 5 HOH 79 479 126 HOH HOH A . N 5 HOH 80 480 247 HOH HOH A . N 5 HOH 81 481 107 HOH HOH A . N 5 HOH 82 482 99 HOH HOH A . N 5 HOH 83 483 37 HOH HOH A . N 5 HOH 84 484 182 HOH HOH A . N 5 HOH 85 485 90 HOH HOH A . N 5 HOH 86 486 116 HOH HOH A . N 5 HOH 87 487 17 HOH HOH A . N 5 HOH 88 488 248 HOH HOH A . N 5 HOH 89 489 42 HOH HOH A . N 5 HOH 90 490 270 HOH HOH A . N 5 HOH 91 491 186 HOH HOH A . N 5 HOH 92 492 26 HOH HOH A . N 5 HOH 93 493 236 HOH HOH A . N 5 HOH 94 494 205 HOH HOH A . N 5 HOH 95 495 10 HOH HOH A . N 5 HOH 96 496 22 HOH HOH A . N 5 HOH 97 497 201 HOH HOH A . N 5 HOH 98 498 48 HOH HOH A . N 5 HOH 99 499 220 HOH HOH A . N 5 HOH 100 500 172 HOH HOH A . N 5 HOH 101 501 85 HOH HOH A . N 5 HOH 102 502 50 HOH HOH A . N 5 HOH 103 503 195 HOH HOH A . N 5 HOH 104 504 119 HOH HOH A . N 5 HOH 105 505 124 HOH HOH A . N 5 HOH 106 506 137 HOH HOH A . N 5 HOH 107 507 221 HOH HOH A . N 5 HOH 108 508 113 HOH HOH A . N 5 HOH 109 509 34 HOH HOH A . N 5 HOH 110 510 96 HOH HOH A . N 5 HOH 111 511 104 HOH HOH A . N 5 HOH 112 512 73 HOH HOH A . N 5 HOH 113 513 232 HOH HOH A . N 5 HOH 114 514 132 HOH HOH A . N 5 HOH 115 515 156 HOH HOH A . N 5 HOH 116 516 274 HOH HOH A . N 5 HOH 117 517 167 HOH HOH A . N 5 HOH 118 518 3 HOH HOH A . N 5 HOH 119 519 21 HOH HOH A . N 5 HOH 120 520 206 HOH HOH A . N 5 HOH 121 521 147 HOH HOH A . N 5 HOH 122 522 273 HOH HOH A . N 5 HOH 123 523 9 HOH HOH A . N 5 HOH 124 524 269 HOH HOH A . N 5 HOH 125 525 185 HOH HOH A . N 5 HOH 126 526 112 HOH HOH A . N 5 HOH 127 527 15 HOH HOH A . N 5 HOH 128 528 171 HOH HOH A . N 5 HOH 129 529 25 HOH HOH A . N 5 HOH 130 530 142 HOH HOH A . N 5 HOH 131 531 228 HOH HOH A . N 5 HOH 132 532 235 HOH HOH A . N 5 HOH 133 533 30 HOH HOH A . N 5 HOH 134 534 2 HOH HOH A . N 5 HOH 135 535 117 HOH HOH A . N 5 HOH 136 536 41 HOH HOH A . N 5 HOH 137 537 262 HOH HOH A . N 5 HOH 138 538 28 HOH HOH A . N 5 HOH 139 539 4 HOH HOH A . N 5 HOH 140 540 121 HOH HOH A . N 5 HOH 141 541 192 HOH HOH A . N 5 HOH 142 542 231 HOH HOH A . N 5 HOH 143 543 143 HOH HOH A . N 5 HOH 144 544 79 HOH HOH A . N 5 HOH 145 545 7 HOH HOH A . N 5 HOH 146 546 5 HOH HOH A . N 5 HOH 147 547 267 HOH HOH A . N 5 HOH 148 548 109 HOH HOH A . N 5 HOH 149 549 265 HOH HOH A . N 5 HOH 150 550 64 HOH HOH A . N 5 HOH 151 551 11 HOH HOH A . N 5 HOH 152 552 13 HOH HOH A . N 5 HOH 153 553 254 HOH HOH A . N 5 HOH 154 554 57 HOH HOH A . N 5 HOH 155 555 160 HOH HOH A . N 5 HOH 156 556 108 HOH HOH A . N 5 HOH 157 557 24 HOH HOH A . N 5 HOH 158 558 237 HOH HOH A . N 5 HOH 159 559 134 HOH HOH A . N 5 HOH 160 560 91 HOH HOH A . N 5 HOH 161 561 251 HOH HOH A . N 5 HOH 162 562 140 HOH HOH A . N 5 HOH 163 563 177 HOH HOH A . N 5 HOH 164 564 157 HOH HOH A . N 5 HOH 165 565 219 HOH HOH A . N 5 HOH 166 566 103 HOH HOH A . N 5 HOH 167 567 62 HOH HOH A . N 5 HOH 168 568 32 HOH HOH A . N 5 HOH 169 569 222 HOH HOH A . N 5 HOH 170 570 95 HOH HOH A . N 5 HOH 171 571 31 HOH HOH A . N 5 HOH 172 572 102 HOH HOH A . N 5 HOH 173 573 70 HOH HOH A . N 5 HOH 174 574 162 HOH HOH A . N 5 HOH 175 575 61 HOH HOH A . N 5 HOH 176 576 216 HOH HOH A . N 5 HOH 177 577 240 HOH HOH A . N 5 HOH 178 578 97 HOH HOH A . N 5 HOH 179 579 29 HOH HOH A . N 5 HOH 180 580 163 HOH HOH A . N 5 HOH 181 581 89 HOH HOH A . N 5 HOH 182 582 191 HOH HOH A . N 5 HOH 183 583 36 HOH HOH A . N 5 HOH 184 584 105 HOH HOH A . N 5 HOH 185 585 209 HOH HOH A . N 5 HOH 186 586 196 HOH HOH A . N 5 HOH 187 587 60 HOH HOH A . N 5 HOH 188 588 197 HOH HOH A . N 5 HOH 189 589 14 HOH HOH A . N 5 HOH 190 590 63 HOH HOH A . N 5 HOH 191 591 207 HOH HOH A . N 5 HOH 192 592 244 HOH HOH A . N 5 HOH 193 593 101 HOH HOH A . N 5 HOH 194 594 58 HOH HOH A . N 5 HOH 195 595 152 HOH HOH A . N 5 HOH 196 596 27 HOH HOH A . N 5 HOH 197 597 242 HOH HOH A . N 5 HOH 198 598 217 HOH HOH A . N 5 HOH 199 599 130 HOH HOH A . N 5 HOH 200 600 250 HOH HOH A . N 5 HOH 201 601 258 HOH HOH A . N 5 HOH 202 602 49 HOH HOH A . N 5 HOH 203 603 257 HOH HOH A . N 5 HOH 204 604 161 HOH HOH A . N 5 HOH 205 605 148 HOH HOH A . N 5 HOH 206 606 176 HOH HOH A . N 5 HOH 207 607 276 HOH HOH A . N 5 HOH 208 608 189 HOH HOH A . N 5 HOH 209 609 33 HOH HOH A . N 5 HOH 210 610 280 HOH HOH A . N 5 HOH 211 611 175 HOH HOH A . N 5 HOH 212 612 275 HOH HOH A . N 5 HOH 213 613 198 HOH HOH A . N 5 HOH 214 614 146 HOH HOH A . N 5 HOH 215 615 106 HOH HOH A . N 5 HOH 216 616 277 HOH HOH A . N 5 HOH 217 617 123 HOH HOH A . N 5 HOH 218 618 281 HOH HOH A . N 5 HOH 219 619 86 HOH HOH A . N 5 HOH 220 620 264 HOH HOH A . N 5 HOH 221 621 215 HOH HOH A . N 5 HOH 222 622 279 HOH HOH A . N 5 HOH 223 623 93 HOH HOH A . N 5 HOH 224 624 180 HOH HOH A . N 5 HOH 225 625 65 HOH HOH A . N 5 HOH 226 626 243 HOH HOH A . N 5 HOH 227 627 84 HOH HOH A . N 5 HOH 228 628 69 HOH HOH A . N 5 HOH 229 629 179 HOH HOH A . N 5 HOH 230 630 59 HOH HOH A . N 5 HOH 231 631 282 HOH HOH A . N 5 HOH 232 632 260 HOH HOH A . N 5 HOH 233 633 278 HOH HOH A . N 5 HOH 234 634 259 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 10 ? CG ? A LYS 9 CG 2 1 Y 1 A LYS 10 ? CD ? A LYS 9 CD 3 1 Y 1 A LYS 10 ? CE ? A LYS 9 CE 4 1 Y 1 A LYS 10 ? NZ ? A LYS 9 NZ 5 1 Y 1 A LYS 18 ? CG ? A LYS 17 CG 6 1 Y 1 A LYS 18 ? CD ? A LYS 17 CD 7 1 Y 1 A LYS 18 ? CE ? A LYS 17 CE 8 1 Y 1 A LYS 18 ? NZ ? A LYS 17 NZ 9 1 Y 1 A GLU 268 ? CG ? A GLU 272 CG 10 1 Y 1 A GLU 268 ? CD ? A GLU 272 CD 11 1 Y 1 A GLU 268 ? OE1 ? A GLU 272 OE1 12 1 Y 1 A GLU 268 ? OE2 ? A GLU 272 OE2 13 1 Y 1 A ASP 280 ? CG ? A ASP 284 CG 14 1 Y 1 A ASP 280 ? OD1 ? A ASP 284 OD1 15 1 Y 1 A ASP 280 ? OD2 ? A ASP 284 OD2 16 1 Y 1 A ASP 285 ? CG ? A ASP 289 CG 17 1 Y 1 A ASP 285 ? OD1 ? A ASP 289 OD1 18 1 Y 1 A ASP 285 ? OD2 ? A ASP 289 OD2 19 1 Y 1 A LYS 288 ? CG ? A LYS 292 CG 20 1 Y 1 A LYS 288 ? CD ? A LYS 292 CD 21 1 Y 1 A LYS 288 ? CE ? A LYS 292 CE 22 1 Y 1 A LYS 288 ? NZ ? A LYS 292 NZ 23 1 Y 1 A LYS 292 ? CG ? A LYS 296 CG 24 1 Y 1 A LYS 292 ? CD ? A LYS 296 CD 25 1 Y 1 A LYS 292 ? CE ? A LYS 296 CE 26 1 Y 1 A LYS 292 ? NZ ? A LYS 296 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? '5.8.0430 (refmacat 0.4.105)' ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? CRANK2 ? ? ? . ? 4 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 98.633 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 9PDZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 39.08 _cell.length_a_esd ? _cell.length_b 65.98 _cell.length_b_esd ? _cell.length_c 64.37 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9PDZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9PDZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% (w/v) PEG 8000, 100 mM HEPES/ Sodium hydroxide pH 7.5' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 295 # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt _diffrn.pdbx_serial_crystal_experiment ? 80 ? ? 1 ? ? ? 1 ? ? ? ? ? ? N ? 80 ? ? 1 ? ? ? 2 ? ? ? ? ? ? N ? 80 ? ? 1 ? ? ? 3 ? ? ? ? ? ? N # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date _diffrn_detector.pdbx_frequency _diffrn_detector.id _diffrn_detector.number_of_axes ? PIXEL 1 'DECTRIS PILATUS 12M' ? ? ? ? 2020-06-26 ? ? ? ? PIXEL 2 'DECTRIS PILATUS 12M' ? ? ? ? 2020-06-26 ? ? ? ? PIXEL 3 'DECTRIS PILATUS 12M' ? ? ? ? 2020-06-26 ? ? ? # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? 'Si(111)' ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? 'Si(111)' ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 3 ? ? 'Si(111)' ? ? ? ? ? 3 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 2.7552 1.0 2 4.2753 1.0 3 4.5082 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 2.7552 ? I23 Diamond ? ? 2 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 4.2753 ? I23 Diamond ? ? 3 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I23' ? ? 4.5082 ? I23 Diamond # loop_ _reflns.B_iso_Wilson_estimate _reflns.entry_id _reflns.data_reduction_details _reflns.data_reduction_method _reflns.d_resolution_high _reflns.d_resolution_low _reflns.details _reflns.limit_h_max _reflns.limit_h_min _reflns.limit_k_max _reflns.limit_k_min _reflns.limit_l_max _reflns.limit_l_min _reflns.number_all _reflns.number_obs _reflns.observed_criterion _reflns.observed_criterion_F_max _reflns.observed_criterion_F_min _reflns.observed_criterion_I_max _reflns.observed_criterion_I_min _reflns.observed_criterion_sigma_F _reflns.observed_criterion_sigma_I _reflns.percent_possible_obs _reflns.R_free_details _reflns.Rmerge_F_all _reflns.Rmerge_F_obs _reflns.Friedel_coverage _reflns.number_gt _reflns.threshold_expression _reflns.pdbx_redundancy _reflns.pdbx_netI_over_av_sigmaI _reflns.pdbx_netI_over_sigmaI _reflns.pdbx_res_netI_over_av_sigmaI_2 _reflns.pdbx_res_netI_over_sigmaI_2 _reflns.pdbx_chi_squared _reflns.pdbx_scaling_rejects _reflns.pdbx_d_res_high_opt _reflns.pdbx_d_res_low_opt _reflns.pdbx_d_res_opt_method _reflns.phase_calculation_details _reflns.pdbx_Rrim_I_all _reflns.pdbx_Rpim_I_all _reflns.pdbx_d_opt _reflns.pdbx_number_measured_all _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.pdbx_CC_half _reflns.pdbx_CC_star _reflns.pdbx_R_split _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_Rmerge_I_all _reflns.pdbx_Rsym_value _reflns.pdbx_CC_split_method _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] _reflns.pdbx_aniso_diffraction_limit_1 _reflns.pdbx_aniso_diffraction_limit_2 _reflns.pdbx_aniso_diffraction_limit_3 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] _reflns.pdbx_aniso_B_tensor_eigenvalue_1 _reflns.pdbx_aniso_B_tensor_eigenvalue_2 _reflns.pdbx_aniso_B_tensor_eigenvalue_3 _reflns.pdbx_orthogonalization_convention _reflns.pdbx_percent_possible_ellipsoidal _reflns.pdbx_percent_possible_spherical _reflns.pdbx_percent_possible_ellipsoidal_anomalous _reflns.pdbx_percent_possible_spherical_anomalous _reflns.pdbx_redundancy_anomalous _reflns.pdbx_CC_half_anomalous _reflns.pdbx_absDiff_over_sigma_anomalous _reflns.pdbx_percent_possible_anomalous _reflns.pdbx_observed_signal_threshold _reflns.pdbx_signal_type _reflns.pdbx_signal_details _reflns.pdbx_signal_software_id ? 9PDZ ? ? 1.796 45.847 ? ? ? ? ? ? ? ? 27220 ? ? ? ? ? ? ? 90.3 ? ? ? ? ? ? 11.4 ? 19.6 ? ? ? ? ? ? ? ? ? ? ? ? 1 1 0.999 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 9PDZ ? ? 2.78 45.68 ? ? ? ? ? ? ? ? 7019 ? ? ? ? ? ? ? 85.79 ? ? ? ? ? ? 1.9 ? 7.22 ? ? ? ? ? ? ? ? ? 0.08481 ? ? 2 2 0.979 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 9PDZ ? ? 2.942 45.73 ? ? ? ? ? ? ? ? 5996 ? ? ? ? ? ? ? 85.90 ? ? ? ? ? ? 1.8 ? 6.75 ? ? ? ? ? ? ? ? 0.1611 0.1139 ? ? 3 3 0.932 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.83 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 929 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.611 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -1.131 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.428 _refine.aniso_B[2][2] 0.879 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.116 _refine.B_iso_max ? _refine.B_iso_mean 37.303 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9PDZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 45.847 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27216 _refine.ls_number_reflns_R_free 1322 _refine.ls_number_reflns_R_work 25894 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.455 _refine.ls_percent_reflns_R_free 4.857 _refine.ls_R_factor_all 0.185 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2194 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1831 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.145 _refine.pdbx_overall_ESU_R_Free 0.133 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 6.267 _refine.overall_SU_ML 0.096 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 45.847 _refine_hist.number_atoms_solvent 234 _refine_hist.number_atoms_total 2541 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2262 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.012 2506 ? r_bond_refined_d ? ? ? 'X-RAY DIFFRACTION' ? 0.003 0.016 2430 ? r_bond_other_d ? ? ? 'X-RAY DIFFRACTION' ? 2.343 1.807 3427 ? r_angle_refined_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.892 1.742 5616 ? r_angle_other_deg ? ? ? 'X-RAY DIFFRACTION' ? 6.804 5.000 320 ? r_dihedral_angle_1_deg ? ? ? 'X-RAY DIFFRACTION' ? 17.603 5.000 19 ? r_dihedral_angle_2_deg ? ? ? 'X-RAY DIFFRACTION' ? 14.450 10.000 403 ? r_dihedral_angle_3_deg ? ? ? 'X-RAY DIFFRACTION' ? 15.130 10.000 90 ? r_dihedral_angle_6_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.123 0.200 377 ? r_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.014 0.020 3018 ? r_gen_planes_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 564 ? r_gen_planes_other ? ? ? 'X-RAY DIFFRACTION' ? 0.225 0.200 507 ? r_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.167 0.200 2122 ? r_symmetry_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.169 0.200 1162 ? r_nbtor_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.080 0.200 1264 ? r_symmetry_nbtor_other ? ? ? 'X-RAY DIFFRACTION' ? 0.176 0.200 191 ? r_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.206 0.200 2 ? r_symmetry_xyhbond_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.370 0.200 7 ? r_symmetry_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.196 0.200 34 ? r_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.263 0.200 11 ? r_symmetry_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 3.075 2.270 1244 ? r_mcbond_it ? ? ? 'X-RAY DIFFRACTION' ? 3.073 2.270 1244 ? r_mcbond_other ? ? ? 'X-RAY DIFFRACTION' ? 4.204 4.067 1576 ? r_mcangle_it ? ? ? 'X-RAY DIFFRACTION' ? 4.202 4.068 1577 ? r_mcangle_other ? ? ? 'X-RAY DIFFRACTION' ? 4.639 2.751 1262 ? r_scbond_it ? ? ? 'X-RAY DIFFRACTION' ? 4.637 2.752 1263 ? r_scbond_other ? ? ? 'X-RAY DIFFRACTION' ? 6.440 4.778 1851 ? r_scangle_it ? ? ? 'X-RAY DIFFRACTION' ? 6.439 4.778 1852 ? r_scangle_other ? ? ? 'X-RAY DIFFRACTION' ? 9.239 25.183 2825 ? r_lrange_it ? ? ? 'X-RAY DIFFRACTION' ? 9.198 24.683 2784 ? r_lrange_other ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.800 1.847 2224 . 75 1354 64.2536 . 0.440 . . 0.440 . . . . . 0.433 . . . . . 20 . 0.942 0.925 0.440 'X-RAY DIFFRACTION' 1.847 1.897 2141 . 96 1681 82.9986 . 0.352 . . 0.351 . . . . . 0.329 . . . . . 20 . 0.958 0.959 0.368 'X-RAY DIFFRACTION' 1.897 1.952 2116 . 89 1702 84.6408 . 0.299 . . 0.296 . . . . . 0.275 . . . . . 20 . 0.972 0.950 0.346 'X-RAY DIFFRACTION' 1.952 2.012 2039 . 83 1672 86.0716 . 0.244 . . 0.243 . . . . . 0.216 . . . . . 20 . 0.973 0.968 0.255 'X-RAY DIFFRACTION' 2.012 2.078 1961 . 70 1641 87.2514 . 0.206 . . 0.203 . . . . . 0.184 . . . . . 20 . 0.978 0.966 0.262 'X-RAY DIFFRACTION' 2.078 2.151 1902 . 86 1610 89.1693 . 0.177 . . 0.175 . . . . . 0.157 . . . . . 20 . 0.982 0.972 0.208 'X-RAY DIFFRACTION' 2.151 2.232 1846 . 95 1573 90.3575 . 0.178 . . 0.176 . . . . . 0.160 . . . . . 20 . 0.982 0.969 0.219 'X-RAY DIFFRACTION' 2.232 2.323 1763 . 83 1539 92.0023 . 0.177 . . 0.173 . . . . . 0.160 . . . . . 20 . 0.982 0.962 0.259 'X-RAY DIFFRACTION' 2.323 2.426 1715 . 70 1526 93.0612 . 0.164 . . 0.162 . . . . . 0.152 . . . . . 20 . 0.984 0.976 0.205 'X-RAY DIFFRACTION' 2.426 2.544 1631 . 74 1471 94.7272 . 0.167 . . 0.165 . . . . . 0.156 . . . . . 20 . 0.985 0.976 0.206 'X-RAY DIFFRACTION' 2.544 2.681 1548 . 82 1402 95.8656 . 0.168 . . 0.165 . . . . . 0.159 . . . . . 20 . 0.986 0.971 0.209 'X-RAY DIFFRACTION' 2.681 2.843 1479 . 59 1384 97.5659 . 0.171 . . 0.169 . . . . . 0.166 . . . . . 20 . 0.987 0.972 0.226 'X-RAY DIFFRACTION' 2.843 3.038 1383 . 54 1312 98.7708 . 0.189 . . 0.188 . . . . . 0.186 . . . . . 20 . 0.984 0.976 0.215 'X-RAY DIFFRACTION' 3.038 3.280 1291 . 51 1240 100.0000 . 0.201 . . 0.199 . . . . . 0.198 . . . . . 20 . 0.984 0.969 0.240 'X-RAY DIFFRACTION' 3.280 3.592 1187 . 63 1124 100.0000 . 0.189 . . 0.187 . . . . . 0.191 . . . . . 20 . 0.985 0.978 0.229 'X-RAY DIFFRACTION' 3.592 4.013 1078 . 55 1023 100.0000 . 0.157 . . 0.154 . . . . . 0.168 . . . . . 20 . 0.988 0.979 0.201 'X-RAY DIFFRACTION' 4.013 4.627 947 . 55 892 100.0000 . 0.127 . . 0.126 . . . . . 0.150 . . . . . 20 . 0.991 0.989 0.144 'X-RAY DIFFRACTION' 4.627 5.653 820 . 42 778 100.0000 . 0.165 . . 0.163 . . . . . 0.186 . . . . . 20 . 0.992 0.986 0.212 'X-RAY DIFFRACTION' 5.653 7.934 638 . 28 610 100.0000 . 0.219 . . 0.218 . . . . . 0.247 . . . . . 20 . 0.985 0.986 0.228 'X-RAY DIFFRACTION' 7.934 45.847 372 . 12 360 100.0000 . 0.221 . . 0.220 . . . . . 0.284 . . . . . 20 . 0.979 0.936 0.248 # _struct.entry_id 9PDZ _struct.title 'Crystal structure of a Spermidine binding protein isolated from Synechococcus CC9311' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9PDZ _struct_keywords.text 'Substrate-binding protein, marine cyanobacteria, Spermidine-binding protein, transport protein' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 2 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q0I8A1_SYNS3 _struct_ref.pdbx_db_accession Q0I8A1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SPIMRAPTKTLPAPWQKQLKAPWRITELKAFVSSDPPWLSSTDLLTIGDGWLSNLNPGSFQAIDAAPLQSQLGPLAEQFL SELPTSWKGKIFPVGVSPWVLLFRGEPALKDQASNSWDVLLDPEFKGKVLLPSSPRLVMSLAEHMQTPDALRRLRQAAIS FDDRHALNWLLQGDAQVAVLPLQRSMGALLRDQRLHAVLPAQGAPLNWTLMLRPSSSKEPLPQDWVKKAWEEPLLSRLLS AGWVPPLARSKLSTAMSRVPKRLHALVLPSNEIWQSCWNLAPLDPSEQDALKAKWKASA ; _struct_ref.pdbx_align_begin 39 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9PDZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 299 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q0I8A1 _struct_ref_seq.db_align_beg 39 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 337 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 295 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 12 ? LYS A 17 ? PRO A 13 LYS A 18 1 ? 6 HELX_P HELX_P2 AA2 PRO A 36 ? THR A 42 ? PRO A 37 THR A 43 5 ? 7 HELX_P HELX_P3 AA3 GLY A 50 ? LEU A 55 ? GLY A 51 LEU A 56 5 ? 6 HELX_P HELX_P4 AA4 ASN A 56 ? GLY A 58 ? ASN A 57 GLY A 59 5 ? 3 HELX_P HELX_P5 AA5 ALA A 65 ? SER A 70 ? ALA A 66 SER A 71 1 ? 6 HELX_P HELX_P6 AA6 GLY A 73 ? GLU A 82 ? GLY A 74 GLU A 83 1 ? 10 HELX_P HELX_P7 AA7 LEU A 83 ? LYS A 88 ? LEU A 84 LYS A 89 5 ? 6 HELX_P HELX_P8 AA8 SER A 116 ? LYS A 126 ? SER A 112 LYS A 122 5 ? 11 HELX_P HELX_P9 AA9 SER A 134 ? HIS A 144 ? SER A 130 HIS A 140 1 ? 11 HELX_P HELX_P10 AB1 ASP A 149 ? ALA A 157 ? ASP A 145 ALA A 153 1 ? 9 HELX_P HELX_P11 AB2 HIS A 165 ? GLY A 173 ? HIS A 161 GLY A 169 1 ? 9 HELX_P HELX_P12 AB3 LEU A 182 ? ASP A 192 ? LEU A 178 ASP A 188 1 ? 11 HELX_P HELX_P13 AB4 PRO A 222 ? ALA A 229 ? PRO A 218 ALA A 225 1 ? 8 HELX_P HELX_P14 AB5 PRO A 233 ? ALA A 241 ? PRO A 229 ALA A 237 1 ? 9 HELX_P HELX_P15 AB6 ALA A 248 ? THR A 254 ? ALA A 244 THR A 250 1 ? 7 HELX_P HELX_P16 AB7 PRO A 260 ? ARG A 262 ? PRO A 256 ARG A 258 5 ? 3 HELX_P HELX_P17 AB8 LEU A 263 ? LEU A 268 ? LEU A 259 LEU A 264 1 ? 6 HELX_P HELX_P18 AB9 SER A 270 ? CYS A 277 ? SER A 266 CYS A 273 1 ? 8 HELX_P HELX_P19 AC1 ASP A 284 ? SER A 298 ? ASP A 280 SER A 294 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 21 A . ? ALA 22 A PRO 22 A ? PRO 23 A 1 10.94 2 GLU 232 A . ? GLU 228 A PRO 233 A ? PRO 229 A 1 5.68 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 24 ? GLU A 27 ? ARG A 25 GLU A 28 AA1 2 ILE A 3 ? ALA A 6 ? ILE A 4 ALA A 7 AA1 3 LEU A 44 ? GLY A 48 ? LEU A 45 GLY A 49 AA1 4 LEU A 206 ? PRO A 214 ? LEU A 202 PRO A 210 AA1 5 PHE A 92 ? ARG A 104 ? PHE A 93 ARG A 105 AA1 6 VAL A 177 ? PRO A 181 ? VAL A 173 PRO A 177 AA1 7 VAL A 129 ? LEU A 131 ? VAL A 125 LEU A 127 AA1 8 ALA A 158 ? PHE A 161 ? ALA A 154 PHE A 157 AA2 1 PHE A 60 ? GLN A 61 ? PHE A 61 GLN A 62 AA2 2 LEU A 206 ? PRO A 214 ? LEU A 202 PRO A 210 AA2 3 PHE A 92 ? ARG A 104 ? PHE A 93 ARG A 105 AA2 4 LEU A 195 ? VAL A 198 ? LEU A 191 VAL A 194 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ARG A 24 ? O ARG A 25 N MET A 4 ? N MET A 5 AA1 2 3 N ARG A 5 ? N ARG A 6 O THR A 46 ? O THR A 47 AA1 3 4 N ILE A 47 ? N ILE A 48 O LEU A 210 ? O LEU A 206 AA1 4 5 O THR A 209 ? O THR A 205 N VAL A 94 ? N VAL A 95 AA1 5 6 N LEU A 102 ? N LEU A 103 O ALA A 178 ? O ALA A 174 AA1 6 7 O VAL A 177 ? O VAL A 173 N LEU A 130 ? N LEU A 126 AA1 7 8 N VAL A 129 ? N VAL A 125 O ILE A 159 ? O ILE A 155 AA2 1 2 N GLN A 61 ? N GLN A 62 O ARG A 213 ? O ARG A 209 AA2 2 3 O THR A 209 ? O THR A 205 N VAL A 94 ? N VAL A 95 AA2 3 4 N PHE A 103 ? N PHE A 104 O HIS A 196 ? O HIS A 192 # _pdbx_entry_details.entry_id 9PDZ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A HIS 161 ? ? O A HOH 403 ? ? 1.34 2 1 HE A ARG 6 ? A OG1 A THR 43 ? ? 1.55 3 1 NZ A LYS 21 ? ? O A HOH 401 ? ? 2.07 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A ARG 105 ? ? CD A ARG 105 ? ? NE A ARG 105 ? ? 96.50 111.80 -15.30 2.10 N 2 1 NE A ARG 132 ? A CZ A ARG 132 ? A NH1 A ARG 132 ? A 116.64 120.30 -3.66 0.50 N 3 1 NE A ARG 132 ? B CZ A ARG 132 ? B NH1 A ARG 132 ? B 128.87 120.30 8.57 0.50 N 4 1 NE A ARG 132 ? B CZ A ARG 132 ? B NH2 A ARG 132 ? B 110.13 120.30 -10.17 0.50 N 5 1 CG A MET 141 ? ? SD A MET 141 ? ? CE A MET 141 ? ? 87.98 100.20 -12.22 1.60 N 6 1 CB A ASP 159 ? ? CA A ASP 159 ? ? C A ASP 159 ? ? 125.35 110.40 14.95 2.00 N 7 1 NE A ARG 209 ? ? CZ A ARG 209 ? ? NH1 A ARG 209 ? ? 123.89 120.30 3.59 0.50 N 8 1 N A ARG 233 ? C CA A ARG 233 ? C CB A ARG 233 ? C 97.82 110.60 -12.78 1.80 N 9 1 NE A ARG 254 ? ? CZ A ARG 254 ? ? NH1 A ARG 254 ? ? 117.17 120.30 -3.13 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 66 ? ? -143.69 55.97 2 1 ASN A 111 ? ? -96.27 50.20 3 1 ASP A 158 ? ? 179.38 125.95 4 1 PRO A 242 ? ? -76.67 38.58 5 1 LEU A 276 ? ? -118.53 73.45 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASP _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 159 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ARG _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 160 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -142.11 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 25 ? ? 0.149 'SIDE CHAIN' 2 1 ARG A 132 ? A 0.094 'SIDE CHAIN' 3 1 ARG A 148 ? ? 0.145 'SIDE CHAIN' 4 1 ARG A 149 ? ? 0.104 'SIDE CHAIN' 5 1 ARG A 160 ? ? 0.105 'SIDE CHAIN' 6 1 ARG A 233 ? A 0.083 'SIDE CHAIN' 7 1 ARG A 254 ? ? 0.248 'SIDE CHAIN' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.0587 _pdbx_refine_tls.origin_y 18.5811 _pdbx_refine_tls.origin_z 48.2071 _pdbx_refine_tls.T[1][1] 0.0348 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0039 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0024 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0382 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0023 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0170 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.3553 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.2787 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.3842 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 3.0219 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.0280 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.9245 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0175 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.2212 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0372 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.1905 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0395 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0685 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.1053 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0447 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0220 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id Ap _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id Ap _pdbx_refine_tls_group.end_auth_seq_id 295 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.selection_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 106 A A GLU 106 2 1 Y 1 A PRO 106 B A PRO 107 3 1 Y 1 A ALA 106 C A ALA 108 4 1 Y 1 A LEU 106 D A LEU 109 5 1 Y 1 A LYS 106 E A LYS 110 6 1 Y 1 A ASP 106 F A ASP 111 7 1 Y 1 A GLN 106 G A GLN 112 8 1 Y 1 A ALA 106 H A ALA 113 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 EDO C1 C N N 89 EDO O1 O N N 90 EDO C2 C N N 91 EDO O2 O N N 92 EDO H11 H N N 93 EDO H12 H N N 94 EDO HO1 H N N 95 EDO H21 H N N 96 EDO H22 H N N 97 EDO HO2 H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HIS N N N N 148 HIS CA C N S 149 HIS C C N N 150 HIS O O N N 151 HIS CB C N N 152 HIS CG C Y N 153 HIS ND1 N Y N 154 HIS CD2 C Y N 155 HIS CE1 C Y N 156 HIS NE2 N Y N 157 HIS OXT O N N 158 HIS H H N N 159 HIS H2 H N N 160 HIS HA H N N 161 HIS HB2 H N N 162 HIS HB3 H N N 163 HIS HD1 H N N 164 HIS HD2 H N N 165 HIS HE1 H N N 166 HIS HE2 H N N 167 HIS HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 LEU N N N N 194 LEU CA C N S 195 LEU C C N N 196 LEU O O N N 197 LEU CB C N N 198 LEU CG C N N 199 LEU CD1 C N N 200 LEU CD2 C N N 201 LEU OXT O N N 202 LEU H H N N 203 LEU H2 H N N 204 LEU HA H N N 205 LEU HB2 H N N 206 LEU HB3 H N N 207 LEU HG H N N 208 LEU HD11 H N N 209 LEU HD12 H N N 210 LEU HD13 H N N 211 LEU HD21 H N N 212 LEU HD22 H N N 213 LEU HD23 H N N 214 LEU HXT H N N 215 LYS N N N N 216 LYS CA C N S 217 LYS C C N N 218 LYS O O N N 219 LYS CB C N N 220 LYS CG C N N 221 LYS CD C N N 222 LYS CE C N N 223 LYS NZ N N N 224 LYS OXT O N N 225 LYS H H N N 226 LYS H2 H N N 227 LYS HA H N N 228 LYS HB2 H N N 229 LYS HB3 H N N 230 LYS HG2 H N N 231 LYS HG3 H N N 232 LYS HD2 H N N 233 LYS HD3 H N N 234 LYS HE2 H N N 235 LYS HE3 H N N 236 LYS HZ1 H N N 237 LYS HZ2 H N N 238 LYS HZ3 H N N 239 LYS HXT H N N 240 MET N N N N 241 MET CA C N S 242 MET C C N N 243 MET O O N N 244 MET CB C N N 245 MET CG C N N 246 MET SD S N N 247 MET CE C N N 248 MET OXT O N N 249 MET H H N N 250 MET H2 H N N 251 MET HA H N N 252 MET HB2 H N N 253 MET HB3 H N N 254 MET HG2 H N N 255 MET HG3 H N N 256 MET HE1 H N N 257 MET HE2 H N N 258 MET HE3 H N N 259 MET HXT H N N 260 PHE N N N N 261 PHE CA C N S 262 PHE C C N N 263 PHE O O N N 264 PHE CB C N N 265 PHE CG C Y N 266 PHE CD1 C Y N 267 PHE CD2 C Y N 268 PHE CE1 C Y N 269 PHE CE2 C Y N 270 PHE CZ C Y N 271 PHE OXT O N N 272 PHE H H N N 273 PHE H2 H N N 274 PHE HA H N N 275 PHE HB2 H N N 276 PHE HB3 H N N 277 PHE HD1 H N N 278 PHE HD2 H N N 279 PHE HE1 H N N 280 PHE HE2 H N N 281 PHE HZ H N N 282 PHE HXT H N N 283 PRO N N N N 284 PRO CA C N S 285 PRO C C N N 286 PRO O O N N 287 PRO CB C N N 288 PRO CG C N N 289 PRO CD C N N 290 PRO OXT O N N 291 PRO H H N N 292 PRO HA H N N 293 PRO HB2 H N N 294 PRO HB3 H N N 295 PRO HG2 H N N 296 PRO HG3 H N N 297 PRO HD2 H N N 298 PRO HD3 H N N 299 PRO HXT H N N 300 SER N N N N 301 SER CA C N S 302 SER C C N N 303 SER O O N N 304 SER CB C N N 305 SER OG O N N 306 SER OXT O N N 307 SER H H N N 308 SER H2 H N N 309 SER HA H N N 310 SER HB2 H N N 311 SER HB3 H N N 312 SER HG H N N 313 SER HXT H N N 314 SPD N1 N N N 315 SPD C2 C N N 316 SPD C3 C N N 317 SPD C4 C N N 318 SPD C5 C N N 319 SPD N6 N N N 320 SPD C7 C N N 321 SPD C8 C N N 322 SPD C9 C N N 323 SPD N10 N N N 324 SPD HN11 H N N 325 SPD HN12 H N N 326 SPD H21 H N N 327 SPD H22 H N N 328 SPD H31 H N N 329 SPD H32 H N N 330 SPD H41 H N N 331 SPD H42 H N N 332 SPD H51 H N N 333 SPD H52 H N N 334 SPD HN6 H N N 335 SPD H71 H N N 336 SPD H72 H N N 337 SPD H81 H N N 338 SPD H82 H N N 339 SPD H91 H N N 340 SPD H92 H N N 341 SPD H101 H N N 342 SPD H102 H N N 343 THR N N N N 344 THR CA C N S 345 THR C C N N 346 THR O O N N 347 THR CB C N R 348 THR OG1 O N N 349 THR CG2 C N N 350 THR OXT O N N 351 THR H H N N 352 THR H2 H N N 353 THR HA H N N 354 THR HB H N N 355 THR HG1 H N N 356 THR HG21 H N N 357 THR HG22 H N N 358 THR HG23 H N N 359 THR HXT H N N 360 TRP N N N N 361 TRP CA C N S 362 TRP C C N N 363 TRP O O N N 364 TRP CB C N N 365 TRP CG C Y N 366 TRP CD1 C Y N 367 TRP CD2 C Y N 368 TRP NE1 N Y N 369 TRP CE2 C Y N 370 TRP CE3 C Y N 371 TRP CZ2 C Y N 372 TRP CZ3 C Y N 373 TRP CH2 C Y N 374 TRP OXT O N N 375 TRP H H N N 376 TRP H2 H N N 377 TRP HA H N N 378 TRP HB2 H N N 379 TRP HB3 H N N 380 TRP HD1 H N N 381 TRP HE1 H N N 382 TRP HE3 H N N 383 TRP HZ2 H N N 384 TRP HZ3 H N N 385 TRP HH2 H N N 386 TRP HXT H N N 387 VAL N N N N 388 VAL CA C N S 389 VAL C C N N 390 VAL O O N N 391 VAL CB C N N 392 VAL CG1 C N N 393 VAL CG2 C N N 394 VAL OXT O N N 395 VAL H H N N 396 VAL H2 H N N 397 VAL HA H N N 398 VAL HB H N N 399 VAL HG11 H N N 400 VAL HG12 H N N 401 VAL HG13 H N N 402 VAL HG21 H N N 403 VAL HG22 H N N 404 VAL HG23 H N N 405 VAL HXT H N N 406 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 SPD N1 C2 sing N N 299 SPD N1 HN11 sing N N 300 SPD N1 HN12 sing N N 301 SPD C2 C3 sing N N 302 SPD C2 H21 sing N N 303 SPD C2 H22 sing N N 304 SPD C3 C4 sing N N 305 SPD C3 H31 sing N N 306 SPD C3 H32 sing N N 307 SPD C4 C5 sing N N 308 SPD C4 H41 sing N N 309 SPD C4 H42 sing N N 310 SPD C5 N6 sing N N 311 SPD C5 H51 sing N N 312 SPD C5 H52 sing N N 313 SPD N6 C7 sing N N 314 SPD N6 HN6 sing N N 315 SPD C7 C8 sing N N 316 SPD C7 H71 sing N N 317 SPD C7 H72 sing N N 318 SPD C8 C9 sing N N 319 SPD C8 H81 sing N N 320 SPD C8 H82 sing N N 321 SPD C9 N10 sing N N 322 SPD C9 H91 sing N N 323 SPD C9 H92 sing N N 324 SPD N10 H101 sing N N 325 SPD N10 H102 sing N N 326 THR N CA sing N N 327 THR N H sing N N 328 THR N H2 sing N N 329 THR CA C sing N N 330 THR CA CB sing N N 331 THR CA HA sing N N 332 THR C O doub N N 333 THR C OXT sing N N 334 THR CB OG1 sing N N 335 THR CB CG2 sing N N 336 THR CB HB sing N N 337 THR OG1 HG1 sing N N 338 THR CG2 HG21 sing N N 339 THR CG2 HG22 sing N N 340 THR CG2 HG23 sing N N 341 THR OXT HXT sing N N 342 TRP N CA sing N N 343 TRP N H sing N N 344 TRP N H2 sing N N 345 TRP CA C sing N N 346 TRP CA CB sing N N 347 TRP CA HA sing N N 348 TRP C O doub N N 349 TRP C OXT sing N N 350 TRP CB CG sing N N 351 TRP CB HB2 sing N N 352 TRP CB HB3 sing N N 353 TRP CG CD1 doub Y N 354 TRP CG CD2 sing Y N 355 TRP CD1 NE1 sing Y N 356 TRP CD1 HD1 sing N N 357 TRP CD2 CE2 doub Y N 358 TRP CD2 CE3 sing Y N 359 TRP NE1 CE2 sing Y N 360 TRP NE1 HE1 sing N N 361 TRP CE2 CZ2 sing Y N 362 TRP CE3 CZ3 doub Y N 363 TRP CE3 HE3 sing N N 364 TRP CZ2 CH2 doub Y N 365 TRP CZ2 HZ2 sing N N 366 TRP CZ3 CH2 sing Y N 367 TRP CZ3 HZ3 sing N N 368 TRP CH2 HH2 sing N N 369 TRP OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Australian Research Council (ARC)' Australia DP200102944 1 'Australian Research Council (ARC)' Australia CE200100029 2 # _atom_sites.entry_id 9PDZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.025589 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003885 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015156 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015713 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 CL 17 17 11.460 0.010 7.196 1.166 6.255 18.519 1.645 47.778 -9.394 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.167 # loop_ # loop_ #