data_9PEJ # _entry.id 9PEJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9PEJ pdb_00009pej 10.2210/pdb9pej/pdb WWPDB D_1000297673 ? ? EMDB EMD-71564 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-07-22 ? 2 'EM metadata' 1 0 2026-07-22 ? 3 'Additional map' 1 0 2026-07-22 1 4 'Half map' 1 0 2026-07-22 1 5 'Half map' 1 0 2026-07-22 2 6 Image 1 0 2026-07-22 ? 7 'Primary map' 1 0 2026-07-22 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9PEJ _pdbx_database_status.recvd_initial_deposition_date 2025-07-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SFX11 peptide nanofibril' _pdbx_database_related.db_id EMD-71564 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email ehe2n@virginia.edu _pdbx_contact_author.name_first Edward _pdbx_contact_author.name_last Egelman _pdbx_contact_author.name_mi H. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4844-5212 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sonani, R.R.' 1 ? 'Schremmer, Z.P.' 2 ? 'Nilsson, B.L.' 3 ? 'Egelman, E.H.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'SFX11 peptide nanofibril' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sonani, R.R.' 1 ? primary 'Egelman, E.H.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'SFX11 peptide' _entity.formula_weight 1408.577 _entity.pdbx_number_of_molecules 6 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)SEFKFSFEFKS(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XSEFKFSFEFKSX _entity_poly.pdbx_strand_id B,K,D,M,E,N _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 GLU n 1 4 PHE n 1 5 LYS n 1 6 PHE n 1 7 SER n 1 8 PHE n 1 9 GLU n 1 10 PHE n 1 11 LYS n 1 12 SER n 1 13 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 1 ACE S4O B . n A 1 2 SER 2 1 1 SER S4O B . n A 1 3 GLU 3 2 2 GLU GLU B . n A 1 4 PHE 4 3 3 PHE PHE B . n A 1 5 LYS 5 4 4 LYS LYS B . n A 1 6 PHE 6 5 5 PHE PHE B . n A 1 7 SER 7 6 6 SER SER B . n A 1 8 PHE 8 7 7 PHE PHE B . n A 1 9 GLU 9 8 8 GLU GLU B . n A 1 10 PHE 10 9 9 PHE PHE B . n A 1 11 LYS 11 10 10 LYS LYS B . n A 1 12 SER 12 11 11 SER S0X B . n A 1 13 NH2 13 12 11 NH2 S0X B . n B 1 1 ACE 1 0 1 ACE S4O K . n B 1 2 SER 2 1 1 SER S4O K . n B 1 3 GLU 3 2 2 GLU GLU K . n B 1 4 PHE 4 3 3 PHE PHE K . n B 1 5 LYS 5 4 4 LYS LYS K . n B 1 6 PHE 6 5 5 PHE PHE K . n B 1 7 SER 7 6 6 SER SER K . n B 1 8 PHE 8 7 7 PHE PHE K . n B 1 9 GLU 9 8 8 GLU GLU K . n B 1 10 PHE 10 9 9 PHE PHE K . n B 1 11 LYS 11 10 10 LYS LYS K . n B 1 12 SER 12 11 11 SER S0X K . n B 1 13 NH2 13 12 11 NH2 S0X K . n C 1 1 ACE 1 0 1 ACE S4O D . n C 1 2 SER 2 1 1 SER S4O D . n C 1 3 GLU 3 2 2 GLU GLU D . n C 1 4 PHE 4 3 3 PHE PHE D . n C 1 5 LYS 5 4 4 LYS LYS D . n C 1 6 PHE 6 5 5 PHE PHE D . n C 1 7 SER 7 6 6 SER SER D . n C 1 8 PHE 8 7 7 PHE PHE D . n C 1 9 GLU 9 8 8 GLU GLU D . n C 1 10 PHE 10 9 9 PHE PHE D . n C 1 11 LYS 11 10 10 LYS LYS D . n C 1 12 SER 12 11 11 SER S0X D . n C 1 13 NH2 13 12 11 NH2 S0X D . n D 1 1 ACE 1 0 1 ACE S4O M . n D 1 2 SER 2 1 1 SER S4O M . n D 1 3 GLU 3 2 2 GLU GLU M . n D 1 4 PHE 4 3 3 PHE PHE M . n D 1 5 LYS 5 4 4 LYS LYS M . n D 1 6 PHE 6 5 5 PHE PHE M . n D 1 7 SER 7 6 6 SER SER M . n D 1 8 PHE 8 7 7 PHE PHE M . n D 1 9 GLU 9 8 8 GLU GLU M . n D 1 10 PHE 10 9 9 PHE PHE M . n D 1 11 LYS 11 10 10 LYS LYS M . n D 1 12 SER 12 11 11 SER S0X M . n D 1 13 NH2 13 12 11 NH2 S0X M . n E 1 1 ACE 1 0 1 ACE S4O E . n E 1 2 SER 2 1 1 SER S4O E . n E 1 3 GLU 3 2 2 GLU GLU E . n E 1 4 PHE 4 3 3 PHE PHE E . n E 1 5 LYS 5 4 4 LYS LYS E . n E 1 6 PHE 6 5 5 PHE PHE E . n E 1 7 SER 7 6 6 SER SER E . n E 1 8 PHE 8 7 7 PHE PHE E . n E 1 9 GLU 9 8 8 GLU GLU E . n E 1 10 PHE 10 9 9 PHE PHE E . n E 1 11 LYS 11 10 10 LYS LYS E . n E 1 12 SER 12 11 11 SER S0X E . n E 1 13 NH2 13 12 11 NH2 S0X E . n F 1 1 ACE 1 0 1 ACE S4O N . n F 1 2 SER 2 1 1 SER S4O N . n F 1 3 GLU 3 2 2 GLU GLU N . n F 1 4 PHE 4 3 3 PHE PHE N . n F 1 5 LYS 5 4 4 LYS LYS N . n F 1 6 PHE 6 5 5 PHE PHE N . n F 1 7 SER 7 6 6 SER SER N . n F 1 8 PHE 8 7 7 PHE PHE N . n F 1 9 GLU 9 8 8 GLU GLU N . n F 1 10 PHE 10 9 9 PHE PHE N . n F 1 11 LYS 11 10 10 LYS LYS N . n F 1 12 SER 12 11 11 SER S0X N . n F 1 13 NH2 13 12 11 NH2 S0X N . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9PEJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9PEJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9PEJ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9PEJ _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.005 ? 1050 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 1.535 ? 1370 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 38.726 ? 220 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.290 ? 110 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 180 ? f_plane_restr ? ? ? # _struct.entry_id 9PEJ _struct.title 'SFX11 peptide nanofibril' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9PEJ _struct_keywords.text 'Short peptide, Cross beta, Nanofibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9PEJ _struct_ref.pdbx_db_accession 9PEJ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9PEJ B 1 ? 13 ? 9PEJ 0 ? 12 ? 0 12 2 1 9PEJ K 1 ? 13 ? 9PEJ 0 ? 12 ? 0 12 3 1 9PEJ D 1 ? 13 ? 9PEJ 0 ? 12 ? 0 12 4 1 9PEJ M 1 ? 13 ? 9PEJ 0 ? 12 ? 0 12 5 1 9PEJ E 1 ? 13 ? 9PEJ 0 ? 12 ? 0 12 6 1 9PEJ N 1 ? 13 ? 9PEJ 0 ? 12 ? 0 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A SER 2 N ? ? B ACE 0 B SER 1 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale2 covale both ? A SER 12 C ? ? ? 1_555 A NH2 13 N ? ? B SER 11 B NH2 12 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B SER 2 N ? ? K ACE 0 K SER 1 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale4 covale both ? B SER 12 C ? ? ? 1_555 B NH2 13 N ? ? K SER 11 K NH2 12 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale5 covale both ? C ACE 1 C ? ? ? 1_555 C SER 2 N ? ? D ACE 0 D SER 1 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale6 covale both ? C SER 12 C ? ? ? 1_555 C NH2 13 N ? ? D SER 11 D NH2 12 1_555 ? ? ? ? ? ? ? 1.454 ? ? covale7 covale both ? D ACE 1 C ? ? ? 1_555 D SER 2 N ? ? M ACE 0 M SER 1 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale8 covale both ? D SER 12 C ? ? ? 1_555 D NH2 13 N ? ? M SER 11 M NH2 12 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale9 covale both ? E ACE 1 C ? ? ? 1_555 E SER 2 N ? ? E ACE 0 E SER 1 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale10 covale both ? E SER 12 C ? ? ? 1_555 E NH2 13 N ? ? E SER 11 E NH2 12 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale11 covale both ? F ACE 1 C ? ? ? 1_555 F SER 2 N ? ? N ACE 0 N SER 1 1_555 ? ? ? ? ? ? ? 1.456 ? ? covale12 covale both ? F SER 12 C ? ? ? 1_555 F NH2 13 N ? ? N SER 11 N NH2 12 1_555 ? ? ? ? ? ? ? 1.451 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 ACE A 1 ? SER A 2 ? ACE B 0 ? 1_555 SER B 1 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 2 ACE B 1 ? SER B 2 ? ACE K 0 ? 1_555 SER K 1 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 3 ACE C 1 ? SER C 2 ? ACE D 0 ? 1_555 SER D 1 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 4 ACE D 1 ? SER D 2 ? ACE M 0 ? 1_555 SER M 1 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 5 ACE E 1 ? SER E 2 ? ACE E 0 ? 1_555 SER E 1 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 6 ACE F 1 ? SER F 2 ? ACE N 0 ? 1_555 SER N 1 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 7 NH2 A 13 ? SER A 12 ? NH2 B 12 ? 1_555 SER B 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' 8 NH2 B 13 ? SER B 12 ? NH2 K 12 ? 1_555 SER K 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' 9 NH2 C 13 ? SER C 12 ? NH2 D 12 ? 1_555 SER D 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' 10 NH2 D 13 ? SER D 12 ? NH2 M 12 ? 1_555 SER M 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' 11 NH2 E 13 ? SER E 12 ? NH2 E 12 ? 1_555 SER E 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' 12 NH2 F 13 ? SER F 12 ? NH2 N 12 ? 1_555 SER N 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS B 5 ? PHE B 6 ? LYS K 4 PHE K 5 AA1 2 LYS D 5 ? PHE D 6 ? LYS M 4 PHE M 5 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LYS _pdbx_struct_sheet_hbond.range_1_label_asym_id B _pdbx_struct_sheet_hbond.range_1_label_seq_id 5 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_1_auth_asym_id K _pdbx_struct_sheet_hbond.range_1_auth_seq_id 4 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id PHE _pdbx_struct_sheet_hbond.range_2_label_asym_id D _pdbx_struct_sheet_hbond.range_2_label_seq_id 6 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id PHE _pdbx_struct_sheet_hbond.range_2_auth_asym_id M _pdbx_struct_sheet_hbond.range_2_auth_seq_id 5 # _pdbx_entry_details.entry_id 9PEJ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C B SER 1 ? ? O B SER 1 ? ? 1.401 1.229 0.172 0.019 N 2 1 C B SER 11 ? ? O B SER 11 ? ? 1.401 1.229 0.172 0.019 N 3 1 C K SER 1 ? ? O K SER 1 ? ? 1.401 1.229 0.172 0.019 N 4 1 C K SER 11 ? ? O K SER 11 ? ? 1.400 1.229 0.171 0.019 N 5 1 C D SER 1 ? ? O D SER 1 ? ? 1.401 1.229 0.172 0.019 N 6 1 C D SER 11 ? ? O D SER 11 ? ? 1.402 1.229 0.173 0.019 N 7 1 C M SER 1 ? ? O M SER 1 ? ? 1.401 1.229 0.172 0.019 N 8 1 C M SER 11 ? ? O M SER 11 ? ? 1.400 1.229 0.171 0.019 N 9 1 C E SER 1 ? ? O E SER 1 ? ? 1.400 1.229 0.171 0.019 N 10 1 C E SER 11 ? ? O E SER 11 ? ? 1.401 1.229 0.172 0.019 N 11 1 C N SER 1 ? ? O N SER 1 ? ? 1.401 1.229 0.172 0.019 N 12 1 C N SER 11 ? ? O N SER 11 ? ? 1.401 1.229 0.172 0.019 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER M 6 ? ? -140.86 57.17 2 1 PHE E 9 ? ? 59.98 71.03 3 1 SER N 6 ? ? -140.36 54.64 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9PEJ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9PEJ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 182400 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Helical oligomer of SFX11 peptides' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9PEJ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9PEJ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9PEJ _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 GLU N N N N 8 GLU CA C N S 9 GLU C C N N 10 GLU O O N N 11 GLU CB C N N 12 GLU CG C N N 13 GLU CD C N N 14 GLU OE1 O N N 15 GLU OE2 O N N 16 GLU OXT O N N 17 GLU H H N N 18 GLU H2 H N N 19 GLU HA H N N 20 GLU HB2 H N N 21 GLU HB3 H N N 22 GLU HG2 H N N 23 GLU HG3 H N N 24 GLU HE2 H N N 25 GLU HXT H N N 26 LYS N N N N 27 LYS CA C N S 28 LYS C C N N 29 LYS O O N N 30 LYS CB C N N 31 LYS CG C N N 32 LYS CD C N N 33 LYS CE C N N 34 LYS NZ N N N 35 LYS OXT O N N 36 LYS H H N N 37 LYS H2 H N N 38 LYS HA H N N 39 LYS HB2 H N N 40 LYS HB3 H N N 41 LYS HG2 H N N 42 LYS HG3 H N N 43 LYS HD2 H N N 44 LYS HD3 H N N 45 LYS HE2 H N N 46 LYS HE3 H N N 47 LYS HZ1 H N N 48 LYS HZ2 H N N 49 LYS HZ3 H N N 50 LYS HXT H N N 51 NH2 N N N N 52 NH2 HN1 H N N 53 NH2 HN2 H N N 54 PHE N N N N 55 PHE CA C N S 56 PHE C C N N 57 PHE O O N N 58 PHE CB C N N 59 PHE CG C Y N 60 PHE CD1 C Y N 61 PHE CD2 C Y N 62 PHE CE1 C Y N 63 PHE CE2 C Y N 64 PHE CZ C Y N 65 PHE OXT O N N 66 PHE H H N N 67 PHE H2 H N N 68 PHE HA H N N 69 PHE HB2 H N N 70 PHE HB3 H N N 71 PHE HD1 H N N 72 PHE HD2 H N N 73 PHE HE1 H N N 74 PHE HE2 H N N 75 PHE HZ H N N 76 PHE HXT H N N 77 SER N N N N 78 SER CA C N S 79 SER C C N N 80 SER O O N N 81 SER CB C N N 82 SER OG O N N 83 SER OXT O N N 84 SER H H N N 85 SER H2 H N N 86 SER HA H N N 87 SER HB2 H N N 88 SER HB3 H N N 89 SER HG H N N 90 SER HXT H N N 91 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 GLU N CA sing N N 7 GLU N H sing N N 8 GLU N H2 sing N N 9 GLU CA C sing N N 10 GLU CA CB sing N N 11 GLU CA HA sing N N 12 GLU C O doub N N 13 GLU C OXT sing N N 14 GLU CB CG sing N N 15 GLU CB HB2 sing N N 16 GLU CB HB3 sing N N 17 GLU CG CD sing N N 18 GLU CG HG2 sing N N 19 GLU CG HG3 sing N N 20 GLU CD OE1 doub N N 21 GLU CD OE2 sing N N 22 GLU OE2 HE2 sing N N 23 GLU OXT HXT sing N N 24 LYS N CA sing N N 25 LYS N H sing N N 26 LYS N H2 sing N N 27 LYS CA C sing N N 28 LYS CA CB sing N N 29 LYS CA HA sing N N 30 LYS C O doub N N 31 LYS C OXT sing N N 32 LYS CB CG sing N N 33 LYS CB HB2 sing N N 34 LYS CB HB3 sing N N 35 LYS CG CD sing N N 36 LYS CG HG2 sing N N 37 LYS CG HG3 sing N N 38 LYS CD CE sing N N 39 LYS CD HD2 sing N N 40 LYS CD HD3 sing N N 41 LYS CE NZ sing N N 42 LYS CE HE2 sing N N 43 LYS CE HE3 sing N N 44 LYS NZ HZ1 sing N N 45 LYS NZ HZ2 sing N N 46 LYS NZ HZ3 sing N N 47 LYS OXT HXT sing N N 48 NH2 N HN1 sing N N 49 NH2 N HN2 sing N N 50 PHE N CA sing N N 51 PHE N H sing N N 52 PHE N H2 sing N N 53 PHE CA C sing N N 54 PHE CA CB sing N N 55 PHE CA HA sing N N 56 PHE C O doub N N 57 PHE C OXT sing N N 58 PHE CB CG sing N N 59 PHE CB HB2 sing N N 60 PHE CB HB3 sing N N 61 PHE CG CD1 doub Y N 62 PHE CG CD2 sing Y N 63 PHE CD1 CE1 sing Y N 64 PHE CD1 HD1 sing N N 65 PHE CD2 CE2 doub Y N 66 PHE CD2 HD2 sing N N 67 PHE CE1 CZ doub Y N 68 PHE CE1 HE1 sing N N 69 PHE CE2 CZ sing Y N 70 PHE CE2 HE2 sing N N 71 PHE CZ HZ sing N N 72 PHE OXT HXT sing N N 73 SER N CA sing N N 74 SER N H sing N N 75 SER N H2 sing N N 76 SER CA C sing N N 77 SER CA CB sing N N 78 SER CA HA sing N N 79 SER C O doub N N 80 SER C OXT sing N N 81 SER CB OG sing N N 82 SER CB HB2 sing N N 83 SER CB HB3 sing N N 84 SER OG HG sing N N 85 SER OXT HXT sing N N 86 # _em_admin.current_status REL _em_admin.deposition_date 2025-07-02 _em_admin.deposition_site RCSB _em_admin.entry_id 9PEJ _em_admin.last_update 2026-07-22 _em_admin.map_release_date 2026-07-22 _em_admin.title 'SFX11 peptide nanofibril' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 32630 _em_entity_assembly_naturalsource.organism 'synthetic construct' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 32630 _em_entity_assembly_recombinant.organism 'synthetic construct' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C2 _em_helical_entity.angular_rotation_per_subunit -4.3 _em_helical_entity.axial_rise_per_subunit 4.7 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.20.1_4487: ? 'IMAGE ACQUISITION' ? 3 1 1 1 ? ? ? MASKING ? 4 1 1 1 ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 6 1 1 1 ? ? ? 'DIFFRACTION INDEXING' ? 7 1 1 1 ? ? ? 'MODEL FITTING' ? 8 1 1 1 ? ? ? OTHER ? 9 1 1 1 ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Foundation (NSF, United States)' 'United States' 'NSF 2304854' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM122510 2 # _atom_sites.entry_id 9PEJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ #