HEADER DNA 03-JUL-25 9PF8 TITLE [A1J] ASYMMETRIC TENSEGRITY TRIANGLE WITH A 1 NUCLEOTIDE SINGLE TITLE 2 STRANDED REGION ADJACENT TO THE JUNCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*GP*AP*GP*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)- COMPND 4 3'); COMPND 5 CHAIN: A; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*TP*GP*TP*CP*TP*TP*GP*TP*GP*GP*TP*CP*GP*C)-3'); COMPND 9 CHAIN: E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'); COMPND 13 CHAIN: D; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'- COMPND 17 D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)- COMPND 18 3'); COMPND 19 CHAIN: B; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: DNA (5'-D(*TP*TP*AP*GP*TP*CP*GP*TP*GP*GP*CP*TP*CP*G)-3'); COMPND 23 CHAIN: F; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 6; COMPND 26 MOLECULE: DNA (5'- COMPND 27 D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)- COMPND 28 3'); COMPND 29 CHAIN: C; COMPND 30 ENGINEERED: YES; COMPND 31 MOL_ID: 7; COMPND 32 MOLECULE: DNA (5'- COMPND 33 D(*CP*TP*GP*CP*CP*AP*CP*CP*GP*TP*AP*CP*AP*CP*CP*GP*AP*TP*CP*A)-3'); COMPND 34 CHAIN: M; COMPND 35 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 MOL_ID: 4; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630; SOURCE 17 MOL_ID: 5; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 20 ORGANISM_TAXID: 32630; SOURCE 21 MOL_ID: 6; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 24 ORGANISM_TAXID: 32630; SOURCE 25 MOL_ID: 7; SOURCE 26 SYNTHETIC: YES; SOURCE 27 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 28 ORGANISM_TAXID: 32630 KEYWDS TENSEGRITY TRIANGLE, DNA, SINGLE STRANDED EXPDTA X-RAY DIFFRACTION AUTHOR A.HORVATH,M.WANG,K.WOLOSZYN,S.VECCHIONI,Y.P.OHAYON,R.SHA REVDAT 1 20-AUG-25 9PF8 0 JRNL AUTH M.WANG,A.HORVATH,K.WOLOSZYN,S.VECCHIONI,Y.P.OHAYON,R.SHA JRNL TITL SINGLE STRANDED REGIONS IN TENSEGRITY TRIANGLES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX REMARK 1 REF ACTA CRYSTALLOGR D STRUCT 2019 REMARK 1 REF 2 BIOL REMARK 1 REFN REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 6.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 6.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 66.2 REMARK 3 NUMBER OF REFLECTIONS : 1811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.282 REMARK 3 R VALUE (WORKING SET) : 0.282 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.690 REMARK 3 FREE R VALUE TEST SET COUNT : 103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.2500 - 6.1000 0.66 1708 103 0.2816 0.2966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.000 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 240.4 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 283.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2849 REMARK 3 ANGLE : 0.940 4385 REMARK 3 CHIRALITY : 0.047 493 REMARK 3 PLANARITY : 0.004 125 REMARK 3 DIHEDRAL : 41.185 1328 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3116 -12.7469 -6.8722 REMARK 3 T TENSOR REMARK 3 T11: 0.7544 T22: 1.3672 REMARK 3 T33: 1.3839 T12: -0.8917 REMARK 3 T13: 0.9530 T23: 2.9763 REMARK 3 L TENSOR REMARK 3 L11: 3.9490 L22: 1.5429 REMARK 3 L33: 0.0998 L12: 1.5962 REMARK 3 L13: -0.1446 L23: 0.2837 REMARK 3 S TENSOR REMARK 3 S11: -0.4311 S12: -1.0267 S13: -2.1394 REMARK 3 S21: -0.9235 S22: 1.4620 S23: -0.3937 REMARK 3 S31: 0.6628 S32: 1.0402 S33: 3.4269 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4327 9.0423 0.1943 REMARK 3 T TENSOR REMARK 3 T11: 1.2564 T22: 1.5929 REMARK 3 T33: 1.5126 T12: -0.1801 REMARK 3 T13: -1.1378 T23: 1.7622 REMARK 3 L TENSOR REMARK 3 L11: 0.5520 L22: 0.8257 REMARK 3 L33: 0.5502 L12: 0.6417 REMARK 3 L13: -0.5446 L23: -0.6244 REMARK 3 S TENSOR REMARK 3 S11: 0.7152 S12: -0.7273 S13: -0.6049 REMARK 3 S21: 0.0983 S22: 0.1609 S23: 0.2750 REMARK 3 S31: 0.3748 S32: -0.2193 S33: 4.3472 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2339 26.8197 -6.8267 REMARK 3 T TENSOR REMARK 3 T11: 4.9582 T22: 2.0997 REMARK 3 T33: 1.3390 T12: -2.8992 REMARK 3 T13: 0.4585 T23: -0.7087 REMARK 3 L TENSOR REMARK 3 L11: 1.9022 L22: 0.7356 REMARK 3 L33: 2.1328 L12: 0.9128 REMARK 3 L13: -0.1270 L23: -0.8572 REMARK 3 S TENSOR REMARK 3 S11: 0.2117 S12: 0.0129 S13: 0.2688 REMARK 3 S21: 0.7497 S22: 0.0040 S23: 0.0765 REMARK 3 S31: -0.6982 S32: 0.1150 S33: 1.1766 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 101 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3942 -7.8279 5.0398 REMARK 3 T TENSOR REMARK 3 T11: -0.7734 T22: -0.3941 REMARK 3 T33: 2.8623 T12: -0.6039 REMARK 3 T13: 1.3638 T23: -0.9851 REMARK 3 L TENSOR REMARK 3 L11: 3.8443 L22: 4.1519 REMARK 3 L33: 1.8009 L12: 2.8906 REMARK 3 L13: -2.6565 L23: -1.9779 REMARK 3 S TENSOR REMARK 3 S11: 2.1345 S12: -1.0616 S13: -0.5290 REMARK 3 S21: 0.8381 S22: -1.7230 S23: 0.2886 REMARK 3 S31: -1.3616 S32: 1.2238 S33: -2.7481 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 101 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1658 24.0870 -8.2744 REMARK 3 T TENSOR REMARK 3 T11: 1.5721 T22: 1.3300 REMARK 3 T33: -1.0058 T12: -0.7564 REMARK 3 T13: 1.3597 T23: 2.4244 REMARK 3 L TENSOR REMARK 3 L11: 1.1673 L22: 0.7423 REMARK 3 L33: 2.9578 L12: 0.3427 REMARK 3 L13: -0.1106 L23: -0.6945 REMARK 3 S TENSOR REMARK 3 S11: -1.2089 S12: -0.0114 S13: 0.2946 REMARK 3 S21: 0.1507 S22: 0.4769 S23: -0.1051 REMARK 3 S31: 0.3849 S32: -0.5253 S33: -1.6432 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 101 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5143 23.5039 -19.3808 REMARK 3 T TENSOR REMARK 3 T11: 5.1881 T22: 2.8480 REMARK 3 T33: 4.7127 T12: 1.4566 REMARK 3 T13: -0.9487 T23: 2.0529 REMARK 3 L TENSOR REMARK 3 L11: 1.7884 L22: 0.8075 REMARK 3 L33: 1.2535 L12: 0.1077 REMARK 3 L13: -0.7936 L23: 0.4717 REMARK 3 S TENSOR REMARK 3 S11: -0.0482 S12: 0.2767 S13: -0.3005 REMARK 3 S21: 0.3154 S22: -0.4562 S23: -0.2627 REMARK 3 S31: -0.1057 S32: 0.3170 S33: 0.0139 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 106 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3512 13.8137 -7.0781 REMARK 3 T TENSOR REMARK 3 T11: 3.5183 T22: 2.1084 REMARK 3 T33: 1.0481 T12: 1.4360 REMARK 3 T13: 0.6131 T23: -1.3882 REMARK 3 L TENSOR REMARK 3 L11: 0.3756 L22: 0.4051 REMARK 3 L33: 0.2935 L12: 0.2947 REMARK 3 L13: 0.1296 L23: -0.1053 REMARK 3 S TENSOR REMARK 3 S11: 0.2818 S12: -0.2804 S13: 0.6581 REMARK 3 S21: -0.1366 S22: -0.0398 S23: -0.2307 REMARK 3 S31: -0.1355 S32: -0.0514 S33: 0.1660 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9518 10.5856 9.3941 REMARK 3 T TENSOR REMARK 3 T11: 2.8686 T22: 2.8279 REMARK 3 T33: 4.1225 T12: -1.8535 REMARK 3 T13: 0.4420 T23: 7.9365 REMARK 3 L TENSOR REMARK 3 L11: 0.2672 L22: 4.0999 REMARK 3 L33: 0.7445 L12: -0.2323 REMARK 3 L13: -0.5077 L23: 0.2389 REMARK 3 S TENSOR REMARK 3 S11: -1.2650 S12: 0.0023 S13: -0.1867 REMARK 3 S21: -1.1510 S22: -0.2167 S23: -0.6552 REMARK 3 S31: 1.8162 S32: 0.0856 S33: -2.0060 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5265 8.6297 27.1739 REMARK 3 T TENSOR REMARK 3 T11: 3.3470 T22: 5.5946 REMARK 3 T33: 3.4150 T12: -2.0247 REMARK 3 T13: 1.0239 T23: -3.0655 REMARK 3 L TENSOR REMARK 3 L11: 1.1241 L22: 7.4383 REMARK 3 L33: 0.5205 L12: 1.4761 REMARK 3 L13: -0.0367 L23: 1.6352 REMARK 3 S TENSOR REMARK 3 S11: 0.2111 S12: -0.3640 S13: -0.3079 REMARK 3 S21: 2.0065 S22: -0.4414 S23: -1.1695 REMARK 3 S31: -0.4399 S32: 0.4155 S33: -0.8969 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 101 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4532 1.4691 24.0002 REMARK 3 T TENSOR REMARK 3 T11: -0.2235 T22: 2.9526 REMARK 3 T33: 1.3808 T12: 0.4978 REMARK 3 T13: -0.3464 T23: 0.2555 REMARK 3 L TENSOR REMARK 3 L11: 3.4664 L22: 3.7699 REMARK 3 L33: 2.4090 L12: -2.7685 REMARK 3 L13: -2.8285 L23: 2.3631 REMARK 3 S TENSOR REMARK 3 S11: 1.7672 S12: 0.3008 S13: 0.0099 REMARK 3 S21: 0.4651 S22: 0.8410 S23: -2.9508 REMARK 3 S31: 0.0743 S32: 1.1272 S33: 3.0252 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 101 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.1042 -4.7557 19.6279 REMARK 3 T TENSOR REMARK 3 T11: 3.8697 T22: 5.2703 REMARK 3 T33: 2.6553 T12: -0.5321 REMARK 3 T13: 2.1211 T23: 1.8542 REMARK 3 L TENSOR REMARK 3 L11: 0.3309 L22: 1.1952 REMARK 3 L33: 3.3798 L12: -0.1144 REMARK 3 L13: -0.9079 L23: -0.7280 REMARK 3 S TENSOR REMARK 3 S11: -0.3432 S12: -0.8072 S13: -0.3663 REMARK 3 S21: -0.2893 S22: 0.4280 S23: -0.1978 REMARK 3 S31: 0.4270 S32: 1.3088 S33: 1.8480 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 106 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6283 -12.1779 15.3870 REMARK 3 T TENSOR REMARK 3 T11: 2.6700 T22: 3.2877 REMARK 3 T33: 4.4081 T12: -1.5796 REMARK 3 T13: -1.4714 T23: 2.5425 REMARK 3 L TENSOR REMARK 3 L11: 1.6731 L22: 5.1761 REMARK 3 L33: 4.9795 L12: 2.2787 REMARK 3 L13: -2.0704 L23: -4.0803 REMARK 3 S TENSOR REMARK 3 S11: 0.6670 S12: -0.6298 S13: -0.2903 REMARK 3 S21: -0.0787 S22: 0.2671 S23: 1.0988 REMARK 3 S31: -0.0286 S32: -1.6266 S33: -2.5416 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 111 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8437 -1.8272 12.1848 REMARK 3 T TENSOR REMARK 3 T11: 0.4123 T22: 2.8405 REMARK 3 T33: 2.9012 T12: -0.7737 REMARK 3 T13: 2.4503 T23: -3.2336 REMARK 3 L TENSOR REMARK 3 L11: 0.8154 L22: 0.7359 REMARK 3 L33: 0.1784 L12: -0.6246 REMARK 3 L13: 0.2968 L23: -0.3629 REMARK 3 S TENSOR REMARK 3 S11: -0.1339 S12: 0.6941 S13: -0.6914 REMARK 3 S21: 0.1237 S22: -1.2628 S23: 1.2492 REMARK 3 S31: 0.2256 S32: -1.2303 S33: -4.6317 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 116 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1170 -7.2524 13.5348 REMARK 3 T TENSOR REMARK 3 T11: 2.6590 T22: 0.6472 REMARK 3 T33: 2.1087 T12: 0.7859 REMARK 3 T13: -0.0865 T23: -0.4530 REMARK 3 L TENSOR REMARK 3 L11: 0.7466 L22: 5.2103 REMARK 3 L33: 7.4514 L12: -1.1594 REMARK 3 L13: 2.3392 L23: -2.9349 REMARK 3 S TENSOR REMARK 3 S11: 1.4376 S12: -0.5403 S13: 1.2524 REMARK 3 S21: 0.4642 S22: 1.5364 S23: -0.6160 REMARK 3 S31: -0.4189 S32: 0.1935 S33: 0.9756 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 1 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0950 14.5169 5.0507 REMARK 3 T TENSOR REMARK 3 T11: 2.2192 T22: 1.1764 REMARK 3 T33: 1.0983 T12: 0.5084 REMARK 3 T13: 0.3751 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.1865 L22: 2.7509 REMARK 3 L33: 0.6477 L12: -0.0072 REMARK 3 L13: 0.3471 L23: -0.2271 REMARK 3 S TENSOR REMARK 3 S11: -0.1590 S12: 0.2204 S13: 0.0539 REMARK 3 S21: -0.7451 S22: -0.3099 S23: -1.2369 REMARK 3 S31: 0.4077 S32: 0.1557 S33: -0.6115 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'M' AND (RESID 7 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7565 0.2258 5.3259 REMARK 3 T TENSOR REMARK 3 T11: 0.7831 T22: -1.3200 REMARK 3 T33: -1.2000 T12: -2.1029 REMARK 3 T13: 1.3537 T23: 1.0132 REMARK 3 L TENSOR REMARK 3 L11: 3.9455 L22: 0.8440 REMARK 3 L33: 4.1048 L12: -0.7540 REMARK 3 L13: 0.1318 L23: 0.6509 REMARK 3 S TENSOR REMARK 3 S11: 2.4260 S12: -1.4427 S13: -0.4435 REMARK 3 S21: 0.1760 S22: 0.2989 S23: -0.3815 REMARK 3 S31: -0.1122 S32: -0.3379 S33: 5.3029 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9PF8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1000297689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920208 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1829 REMARK 200 RESOLUTION RANGE HIGH (A) : 6.100 REMARK 200 RESOLUTION RANGE LOW (A) : 67.007 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.0 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 6.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 7.13 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 84.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MOPS, 1.25 M MAGNESIUM SULFATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, D, B, F, C, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA A 123 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG E 110 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DC B 107 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT F 105 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 9PF8 A 101 142 PDB 9PF8 9PF8 101 142 DBREF 9PF8 E 101 114 PDB 9PF8 9PF8 101 114 DBREF 9PF8 D 101 114 PDB 9PF8 9PF8 101 114 DBREF 9PF8 B 101 121 PDB 9PF8 9PF8 101 121 DBREF 9PF8 F 101 114 PDB 9PF8 9PF8 101 114 DBREF 9PF8 C 101 121 PDB 9PF8 9PF8 101 121 DBREF 9PF8 M 1 20 PDB 9PF8 9PF8 1 20 SEQRES 1 A 21 DG DA DG DC DG DA DC DC DT DG DT DA DC SEQRES 2 A 21 DG DG DA DC DA DT DC DA SEQRES 1 E 14 DT DG DT DC DT DT DG DT DG DG DT DC DG SEQRES 2 E 14 DC SEQRES 1 D 14 DT DC DT DG DA DT DG DT DG DG DT DA DG SEQRES 2 D 14 DG SEQRES 1 B 21 DA DA DC DC DT DA DC DC DT DG DG DC DA SEQRES 2 B 21 DG DG DA DC DG DA DC DT SEQRES 1 F 14 DT DT DA DG DT DC DG DT DG DG DC DT DC SEQRES 2 F 14 DG SEQRES 1 C 21 DC DA DC DG DA DG DC DC DT DG DA DT DC SEQRES 2 C 21 DG DG DA DC DA DA DG DA SEQRES 1 M 20 DC DT DG DC DC DA DC DC DG DT DA DC DA SEQRES 2 M 20 DC DC DG DA DT DC DA CRYST1 68.390 68.450 68.550 98.48 95.51 108.60 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014622 0.004921 0.002382 0.00000 SCALE2 0.000000 0.015414 0.002963 0.00000 SCALE3 0.000000 0.000000 0.014924 0.00000 MASTER 457 0 0 0 0 0 0 6 2543 7 0 14 END