HEADER DNA BINDING PROTEIN 25-AUG-25 9Q7W TITLE ONE OF A SERIES OF ENGINEERED VARIANTS OF I-ONUI MEGANUCLEASE TITLE 2 TARGETING ALTERED DNA TARGET SEQUENCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL PROTEIN 3/HOMING ENDONUCLEASE-LIKE PROTEIN COMPND 3 FUSION; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (26-MER); COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (26-MER); COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 GENE: HEG FUSION, RPS3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS MEGANUCLEASE, STRUCTURE PREDICTION, PROTEIN ENGINEERING, DNA BINDING KEYWDS 2 PROTEIN-DNA COMPLEX, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.WERTHER,B.L.STODDARD REVDAT 1 10-SEP-25 9Q7W 0 JRNL AUTH M.A.ESLER,R.WERTHER,P.BRADLEY,B.L.STODDARD JRNL TITL PREDICTION, MODELING AND DESIGN OF PROTEIN-DNA RECOGNITION JRNL TITL 2 VIA COMPUTATIONAL AND MACHINE LEARNING APPROACHES: JRNL TITL 3 ACCOMPLISHMENTS AND REMAINING CHALLENGES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 15736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6640 - 5.6390 0.97 1393 155 0.1878 0.2323 REMARK 3 2 5.6390 - 4.4773 0.97 1316 147 0.1808 0.2264 REMARK 3 3 4.4773 - 3.9117 0.98 1280 142 0.1810 0.2537 REMARK 3 4 3.9117 - 3.5543 0.99 1300 144 0.2166 0.2546 REMARK 3 5 3.5543 - 3.2996 0.98 1283 141 0.2211 0.2754 REMARK 3 6 3.2996 - 3.1051 0.98 1270 139 0.2446 0.2894 REMARK 3 7 3.1051 - 2.9496 1.00 1301 144 0.2604 0.3156 REMARK 3 8 2.9496 - 2.8213 1.00 1269 141 0.2761 0.3325 REMARK 3 9 2.8213 - 2.7127 1.00 1291 144 0.2866 0.3909 REMARK 3 10 2.7127 - 2.6191 1.00 1262 141 0.2762 0.3433 REMARK 3 11 2.6191 - 2.5372 0.92 1200 133 0.2892 0.3420 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3486 REMARK 3 ANGLE : 0.449 4941 REMARK 3 CHIRALITY : 0.035 568 REMARK 3 PLANARITY : 0.001 445 REMARK 3 DIHEDRAL : 19.340 1862 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9Q7W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1000299493. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15840 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.16 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150MM CALCIUM ACETATE, 100MM TRIS PH REMARK 280 8.0, 22.55 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.61200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.42950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.24450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.42950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.61200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.24450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 ARG A 6 REMARK 465 ARG A 7 REMARK 465 GLU A 8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 9 OG REMARK 470 LEU A 26 CG CD1 CD2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 SER A 36 OG REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 ILE A 182 CG1 CG2 CD1 REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 SER A 190 OG REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 LYS A 229 CG CD CE NZ REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 VAL A 261 CG1 CG2 REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLU A 284 CG CD OE1 OE2 REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 LEU A 295 CG CD1 CD2 REMARK 470 ASN A 296 CG OD1 ND2 REMARK 470 ASN A 298 CG OD1 ND2 REMARK 470 LYS A 299 CG CD CE NZ REMARK 470 ARG A 301 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 65 36.78 70.18 REMARK 500 LYS A 120 14.38 59.43 REMARK 500 ASN A 139 -122.85 48.08 REMARK 500 GLU A 152 37.55 -99.97 REMARK 500 SER A 155 177.15 177.89 REMARK 500 ARG A 158 145.16 75.31 REMARK 500 ASP A 208 51.64 -108.68 REMARK 500 CYS A 221 -176.32 -178.67 REMARK 500 SER A 230 -112.12 69.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 21 O REMARK 620 2 GLU A 178 OE1 104.1 REMARK 620 3 HOH A 502 O 104.9 85.8 REMARK 620 4 HOH A 508 O 80.2 170.7 85.1 REMARK 620 5 DC B 16 OP1 168.1 73.7 86.7 103.8 REMARK 620 6 DA C 16 OP2 73.5 93.7 178.2 95.4 94.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE2 REMARK 620 2 GLY A 177 O 78.8 REMARK 620 3 HOH A 504 O 83.0 97.1 REMARK 620 4 DA B 17 OP2 85.8 67.0 162.1 REMARK 620 5 DT C 15 OP1 83.6 158.9 92.1 100.5 REMARK 620 N 1 2 3 4 DBREF 9Q7W A 5 301 UNP Q4VWW5 Q4VWW5_OPHNO 417 713 DBREF 9Q7W B 1 26 PDB 9Q7W 9Q7W 1 26 DBREF 9Q7W C 1 26 PDB 9Q7W 9Q7W 1 26 SEQADV 9Q7W MET A 2 UNP Q4VWW5 INITIATING METHIONINE SEQADV 9Q7W ALA A 3 UNP Q4VWW5 EXPRESSION TAG SEQADV 9Q7W SER A 4 UNP Q4VWW5 EXPRESSION TAG SEQADV 9Q7W LYS A 108 UNP Q4VWW5 MET 520 CONFLICT SEQADV 9Q7W SER A 115 UNP Q4VWW5 CYS 527 CONFLICT SEQADV 9Q7W GLU A 125 UNP Q4VWW5 ILE 537 CONFLICT SEQADV 9Q7W ASN A 153 UNP Q4VWW5 ILE 565 CONFLICT SEQADV 9Q7W SER A 180 UNP Q4VWW5 CYS 592 CONFLICT SEQADV 9Q7W ILE A 182 UNP Q4VWW5 PHE 594 CONFLICT SEQADV 9Q7W ARG A 199 UNP Q4VWW5 VAL 611 CONFLICT SEQADV 9Q7W THR A 201 UNP Q4VWW5 SER 613 CONFLICT SEQADV 9Q7W VAL A 225 UNP Q4VWW5 LYS 637 CONFLICT SEQADV 9Q7W SER A 227 UNP Q4VWW5 LYS 639 CONFLICT SEQADV 9Q7W THR A 236 UNP Q4VWW5 ASP 648 CONFLICT SEQRES 1 A 300 MET ALA SER SER ARG ARG GLU SER ILE ASN PRO TRP ILE SEQRES 2 A 300 LEU THR GLY PHE ALA ASP ALA GLU GLY SER PHE LEU LEU SEQRES 3 A 300 ARG ILE ARG ASN ASN ASN LYS SER SER VAL GLY TYR SER SEQRES 4 A 300 THR GLU LEU GLY PHE GLN ILE THR LEU HIS ASN LYS ASP SEQRES 5 A 300 LYS SER ILE LEU GLU ASN ILE GLN SER THR TRP LYS VAL SEQRES 6 A 300 GLY VAL ILE ALA ASN SER GLY ASP ASN ALA VAL SER LEU SEQRES 7 A 300 LYS VAL THR ARG PHE GLU ASP LEU LYS VAL ILE ILE ASP SEQRES 8 A 300 HIS PHE GLU LYS TYR PRO LEU ILE THR GLN LYS LEU GLY SEQRES 9 A 300 ASP TYR LYS LEU PHE LYS GLN ALA PHE SER VAL MET GLU SEQRES 10 A 300 ASN LYS GLU HIS LEU LYS GLU ASN GLY ILE LYS GLU LEU SEQRES 11 A 300 VAL ARG ILE LYS ALA LYS LEU ASN TRP GLY LEU THR ASP SEQRES 12 A 300 GLU LEU LYS LYS ALA PHE PRO GLU ASN ILE SER LYS GLU SEQRES 13 A 300 ARG SER LEU ILE ASN LYS ASN ILE PRO ASN PHE LYS TRP SEQRES 14 A 300 LEU ALA GLY PHE THR SER GLY GLU GLY SER PHE ILE VAL SEQRES 15 A 300 ASN LEU ILE LYS SER LYS SER LYS LEU GLY VAL GLN VAL SEQRES 16 A 300 GLN LEU ARG PHE THR ILE THR GLN HIS ILE LYS ASP LYS SEQRES 17 A 300 ASN LEU MET ASN SER LEU ILE THR TYR LEU GLY CYS GLY SEQRES 18 A 300 TYR ILE VAL GLU SER ASN LYS SER GLU PHE SER TRP LEU SEQRES 19 A 300 THR PHE VAL VAL THR LYS PHE SER ASP ILE ASN ASP LYS SEQRES 20 A 300 ILE ILE PRO VAL PHE GLN GLU ASN THR LEU ILE GLY VAL SEQRES 21 A 300 LYS LEU GLU ASP PHE GLU ASP TRP CYS LYS VAL ALA LYS SEQRES 22 A 300 LEU ILE GLU GLU LYS LYS HIS LEU THR GLU SER GLY LEU SEQRES 23 A 300 ASP GLU ILE LYS LYS ILE LYS LEU ASN MET ASN LYS GLY SEQRES 24 A 300 ARG SEQRES 1 B 26 DG DG DG DT DT DT DC DC DA DC DT DT DA SEQRES 2 B 26 DT DT DC DA DA DG DT DT DT DT DT DA DG SEQRES 1 C 26 DC DC DT DA DA DA DA DA DC DT DT DG DA SEQRES 2 C 26 DA DT DA DA DG DT DG DG DA DA DA DC DC HET CA A 401 1 HET CA A 402 1 HET EDO A 403 10 HET EDO B 101 10 HET GOL B 102 14 HET GOL B 103 14 HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 CA 2(CA 2+) FORMUL 6 EDO 2(C2 H6 O2) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 HOH *15(H2 O) HELIX 1 AA1 ASN A 11 GLU A 22 1 12 HELIX 2 AA2 ASP A 53 LYS A 65 1 13 HELIX 3 AA3 ARG A 83 GLU A 85 5 3 HELIX 4 AA4 ASP A 86 TYR A 97 1 12 HELIX 5 AA5 GLN A 102 ASN A 119 1 18 HELIX 6 AA6 LYS A 120 LEU A 123 5 4 HELIX 7 AA7 LYS A 124 ALA A 136 1 13 HELIX 8 AA8 THR A 143 PHE A 150 1 8 HELIX 9 AA9 ASN A 167 GLU A 178 1 12 HELIX 10 AB1 ASP A 208 GLY A 220 1 13 HELIX 11 AB2 LYS A 241 LYS A 248 1 8 HELIX 12 AB3 LYS A 248 ASN A 256 1 9 HELIX 13 AB4 GLY A 260 GLU A 278 1 19 HELIX 14 AB5 LYS A 279 LEU A 282 5 4 HELIX 15 AB6 THR A 283 GLY A 300 1 18 SHEET 1 AA1 4 GLY A 23 ASN A 31 0 SHEET 2 AA1 4 TYR A 39 HIS A 50 -1 O SER A 40 N ARG A 30 SHEET 3 AA1 4 ALA A 76 VAL A 81 -1 O VAL A 81 N PHE A 45 SHEET 4 AA1 4 VAL A 68 ASN A 71 -1 N ALA A 70 O SER A 78 SHEET 1 AA2 4 GLY A 179 LYS A 187 0 SHEET 2 AA2 4 VAL A 194 HIS A 205 -1 O GLN A 195 N ILE A 186 SHEET 3 AA2 4 PHE A 232 VAL A 239 -1 O PHE A 237 N ILE A 202 SHEET 4 AA2 4 TYR A 223 LYS A 229 -1 N TYR A 223 O VAL A 238 LINK O ALA A 21 CA CA A 401 1555 1555 2.36 LINK OE2 GLU A 22 CA CA A 402 1555 1555 2.45 LINK O GLY A 177 CA CA A 402 1555 1555 2.38 LINK OE1 GLU A 178 CA CA A 401 1555 1555 2.63 LINK CA CA A 401 O HOH A 502 1555 1555 2.33 LINK CA CA A 401 O HOH A 508 1555 1555 2.43 LINK CA CA A 401 OP1 DC B 16 1555 1555 2.32 LINK CA CA A 401 OP2 DA C 16 1555 1555 2.30 LINK CA CA A 402 O HOH A 504 1555 1555 2.37 LINK CA CA A 402 OP2 DA B 17 1555 1555 2.38 LINK CA CA A 402 OP1 DT C 15 1555 1555 2.30 CRYST1 39.224 70.489 166.859 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025495 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005993 0.00000 TER 2240 ARG A 301 TER 2769 DG B 26 TER 3302 DC C 26 HETATM 3303 CA CA A 401 45.964 3.741 33.919 1.00 46.46 CA HETATM 3304 CA CA A 402 51.468 -0.673 36.913 1.00 54.93 CA HETATM 3305 C1 EDO A 403 43.974 18.579 33.527 1.00 68.91 C HETATM 3306 O1 EDO A 403 45.014 18.786 34.490 1.00 64.09 O HETATM 3307 C2 EDO A 403 44.086 17.174 32.948 1.00 65.71 C HETATM 3308 O2 EDO A 403 45.467 16.832 32.781 1.00 56.42 O HETATM 3309 H11 EDO A 403 42.999 18.705 34.003 1.00 82.69 H HETATM 3310 H12 EDO A 403 44.061 19.316 32.726 1.00 82.69 H HETATM 3311 HO1 EDO A 403 44.941 19.678 34.857 1.00 76.90 H HETATM 3312 H21 EDO A 403 43.607 16.459 33.619 1.00 78.85 H HETATM 3313 H22 EDO A 403 43.576 17.131 31.983 1.00 78.85 H HETATM 3314 HO2 EDO A 403 45.536 15.940 32.414 1.00 67.70 H HETATM 3315 C1 EDO B 101 40.953 17.770 63.836 1.00 71.76 C HETATM 3316 O1 EDO B 101 41.694 17.012 64.799 1.00 70.86 O HETATM 3317 C2 EDO B 101 41.589 17.613 62.459 1.00 63.30 C HETATM 3318 O2 EDO B 101 40.875 18.407 61.505 1.00 75.89 O HETATM 3319 H11 EDO B 101 39.919 17.420 63.807 1.00 86.11 H HETATM 3320 H12 EDO B 101 40.948 18.824 64.121 1.00 86.11 H HETATM 3321 HO1 EDO B 101 41.287 17.115 65.671 1.00 85.03 H HETATM 3322 H21 EDO B 101 42.633 17.931 62.496 1.00 75.96 H HETATM 3323 H22 EDO B 101 41.563 16.563 62.159 1.00 75.96 H HETATM 3324 HO2 EDO B 101 41.281 18.304 60.633 1.00 91.06 H HETATM 3325 C1 GOL B 102 53.376 11.235 24.282 1.00 67.41 C HETATM 3326 O1 GOL B 102 52.148 11.068 24.955 1.00 67.83 O HETATM 3327 C2 GOL B 102 53.672 12.719 24.105 1.00 70.89 C HETATM 3328 O2 GOL B 102 54.211 13.249 25.295 1.00 77.69 O HETATM 3329 C3 GOL B 102 54.647 12.918 22.951 1.00 68.22 C HETATM 3330 O3 GOL B 102 55.539 11.828 22.881 1.00 64.85 O HETATM 3331 H11 GOL B 102 54.176 10.767 24.855 1.00 80.89 H HETATM 3332 H12 GOL B 102 53.328 10.751 23.306 1.00 80.89 H HETATM 3333 HO1 GOL B 102 51.931 10.114 25.007 1.00 81.40 H HETATM 3334 H2 GOL B 102 52.741 13.232 23.864 1.00 85.07 H HETATM 3335 HO2 GOL B 102 55.059 12.800 25.497 1.00 93.22 H HETATM 3336 H31 GOL B 102 54.096 13.002 22.014 1.00 81.86 H HETATM 3337 H32 GOL B 102 55.207 13.842 23.098 1.00 81.86 H HETATM 3338 HO3 GOL B 102 56.033 11.864 22.036 1.00 77.82 H HETATM 3339 C1 GOL B 103 57.372 -6.798 7.199 1.00 78.59 C HETATM 3340 O1 GOL B 103 56.079 -6.234 7.186 1.00 72.30 O HETATM 3341 C2 GOL B 103 58.394 -5.715 7.529 1.00 78.68 C HETATM 3342 O2 GOL B 103 57.742 -4.578 8.046 1.00 71.21 O HETATM 3343 C3 GOL B 103 59.423 -6.225 8.533 1.00 73.78 C HETATM 3344 O3 GOL B 103 60.081 -5.132 9.135 1.00 78.47 O HETATM 3345 H11 GOL B 103 57.421 -7.591 7.946 1.00 94.31 H HETATM 3346 H12 GOL B 103 57.595 -7.232 6.225 1.00 94.31 H HETATM 3347 HO1 GOL B 103 55.429 -6.914 6.910 1.00 86.76 H HETATM 3348 H2 GOL B 103 58.917 -5.447 6.610 1.00 94.41 H HETATM 3349 HO2 GOL B 103 57.297 -4.812 8.887 1.00 85.45 H HETATM 3350 H31 GOL B 103 58.927 -6.822 9.298 1.00 88.54 H HETATM 3351 H32 GOL B 103 60.151 -6.859 8.026 1.00 88.54 H HETATM 3352 HO3 GOL B 103 60.007 -4.346 8.554 1.00 94.16 H HETATM 3353 O HOH A 501 47.219 13.575 19.873 1.00 48.91 O HETATM 3354 O HOH A 502 43.639 3.848 34.093 1.00 40.06 O HETATM 3355 O HOH A 503 39.816 10.213 29.131 1.00 49.24 O HETATM 3356 O HOH A 504 51.292 -3.011 36.605 1.00 44.62 O HETATM 3357 O HOH A 505 48.241 2.653 44.067 1.00 45.24 O HETATM 3358 O HOH A 506 35.978 15.710 16.421 1.00 58.00 O HETATM 3359 O HOH A 507 57.344 -2.547 46.006 1.00 61.52 O HETATM 3360 O HOH A 508 45.632 4.653 31.693 1.00 43.15 O HETATM 3361 O HOH B 201 50.565 -6.289 14.925 1.00 52.28 O HETATM 3362 O HOH B 202 62.190 18.289 23.653 1.00 57.28 O HETATM 3363 O HOH B 203 40.995 15.951 59.839 1.00 64.69 O HETATM 3364 O HOH B 204 56.767 -9.990 5.757 1.00 76.13 O HETATM 3365 O HOH C 101 49.206 2.114 35.272 1.00 42.10 O HETATM 3366 O HOH C 102 52.671 -2.204 65.311 1.00 62.21 O HETATM 3367 O HOH C 103 40.656 1.527 56.236 1.00 52.44 O CONECT 97 3303 CONECT 107 3304 CONECT 1316 3304 CONECT 1324 3303 CONECT 2544 3303 CONECT 2564 3304 CONECT 3054 3304 CONECT 3075 3303 CONECT 3303 97 1324 2544 3075 CONECT 3303 3354 3360 CONECT 3304 107 1316 2564 3054 CONECT 3304 3356 CONECT 3305 3306 3307 3309 3310 CONECT 3306 3305 3311 CONECT 3307 3305 3308 3312 3313 CONECT 3308 3307 3314 CONECT 3309 3305 CONECT 3310 3305 CONECT 3311 3306 CONECT 3312 3307 CONECT 3313 3307 CONECT 3314 3308 CONECT 3315 3316 3317 3319 3320 CONECT 3316 3315 3321 CONECT 3317 3315 3318 3322 3323 CONECT 3318 3317 3324 CONECT 3319 3315 CONECT 3320 3315 CONECT 3321 3316 CONECT 3322 3317 CONECT 3323 3317 CONECT 3324 3318 CONECT 3325 3326 3327 3331 3332 CONECT 3326 3325 3333 CONECT 3327 3325 3328 3329 3334 CONECT 3328 3327 3335 CONECT 3329 3327 3330 3336 3337 CONECT 3330 3329 3338 CONECT 3331 3325 CONECT 3332 3325 CONECT 3333 3326 CONECT 3334 3327 CONECT 3335 3328 CONECT 3336 3329 CONECT 3337 3329 CONECT 3338 3330 CONECT 3339 3340 3341 3345 3346 CONECT 3340 3339 3347 CONECT 3341 3339 3342 3343 3348 CONECT 3342 3341 3349 CONECT 3343 3341 3344 3350 3351 CONECT 3344 3343 3352 CONECT 3345 3339 CONECT 3346 3339 CONECT 3347 3340 CONECT 3348 3341 CONECT 3349 3342 CONECT 3350 3343 CONECT 3351 3343 CONECT 3352 3344 CONECT 3354 3303 CONECT 3356 3304 CONECT 3360 3303 MASTER 309 0 6 15 8 0 0 6 3336 3 63 28 END