HEADER DNA BINDING PROTEIN 21-MAR-25 9QLH TITLE YERA41 FAMILY-A DNA POLYMERASE IN COMPLEX WITH A DNA DUPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.7; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: NO DENSITY FROM 90 TO 140; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (25-MER); COMPND 9 CHAIN: P; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (29-MER); COMPND 13 CHAIN: T; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 3 ORGANISM_TAXID: 866768; SOURCE 4 EXPRESSION_SYSTEM: YERSINIA PHAGE YERA41; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 2815754; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: DNA MOLECULE; SOURCE 9 ORGANISM_TAXID: 2853804; SOURCE 10 MOL_ID: 3; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: DNA MOLECULE; SOURCE 13 ORGANISM_TAXID: 2853804 KEYWDS DNA REPLICATION, FAMILY-A DNA POLYMERASE, GLYCOSYLASE, DNA BINDING KEYWDS 2 PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR S.MISSOURY,M.DELARUE REVDAT 1 08-APR-26 9QLH 0 JRNL AUTH S.MISSOURY,M.DELARUE JRNL TITL YERA41 FAMILY-A DNA POLYMERASE IN COMPLEX WITH A DNA DUPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 5.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 5.000 REMARK 3 NUMBER OF PARTICLES : 30217 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9QLH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-APR-25. REMARK 100 THE DEPOSITION ID IS D_1292145800. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DNA POLYMERASE FROM YERA41 IN REMARK 245 COMPLEX WITH DSDNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : 4D-STEM REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 92 REMARK 465 ASP A 93 REMARK 465 LEU A 94 REMARK 465 ALA A 95 REMARK 465 ASP A 96 REMARK 465 ASP A 97 REMARK 465 GLN A 98 REMARK 465 GLU A 99 REMARK 465 GLU A 100 REMARK 465 GLU A 101 REMARK 465 GLU A 102 REMARK 465 GLU A 103 REMARK 465 VAL A 104 REMARK 465 GLU A 105 REMARK 465 ASP A 106 REMARK 465 THR A 107 REMARK 465 ASP A 108 REMARK 465 ASN A 109 REMARK 465 GLU A 110 REMARK 465 GLU A 111 REMARK 465 ASP A 112 REMARK 465 ASP A 113 REMARK 465 ASP A 114 REMARK 465 SER A 115 REMARK 465 GLU A 116 REMARK 465 ASP A 117 REMARK 465 ASP A 118 REMARK 465 GLU A 119 REMARK 465 SER A 120 REMARK 465 GLY A 121 REMARK 465 GLU A 122 REMARK 465 GLU A 123 REMARK 465 SER A 124 REMARK 465 ASP A 125 REMARK 465 GLY A 126 REMARK 465 ASP A 127 REMARK 465 ASP A 128 REMARK 465 ASP A 129 REMARK 465 ASP A 130 REMARK 465 ASP A 131 REMARK 465 ASP A 132 REMARK 465 GLU A 133 REMARK 465 PHE A 134 REMARK 465 LYS A 135 REMARK 465 VAL A 136 REMARK 465 LYS A 137 REMARK 465 LYS A 138 REMARK 465 THR A 139 REMARK 465 LYS A 140 REMARK 465 DC P 2 REMARK 465 DA P 3 REMARK 465 DC P 4 REMARK 465 DA P 5 REMARK 465 DA T -9 REMARK 465 DA T -8 REMARK 465 DA T -7 REMARK 465 DA T -6 REMARK 465 DT T -5 REMARK 465 DC T -4 REMARK 465 DT T 26 REMARK 465 DG T 27 REMARK 465 DT T 28 REMARK 465 DG T 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG P 30 O3' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC T 19 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT T 20 O3' - P - OP1 ANGL. DEV. = 7.6 DEGREES REMARK 500 DT T 20 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 15 -103.13 28.02 REMARK 500 ASP A 80 144.52 -172.94 REMARK 500 GLU A 82 -148.58 60.49 REMARK 500 TYR A 151 144.51 86.19 REMARK 500 ASN A 164 42.98 -107.20 REMARK 500 MET A 173 -108.09 48.24 REMARK 500 ILE A 176 -62.03 -106.83 REMARK 500 LEU A 189 19.75 48.61 REMARK 500 ASN A 190 -30.20 -134.20 REMARK 500 THR A 192 -54.46 -123.16 REMARK 500 VAL A 198 76.45 52.54 REMARK 500 ASN A 236 -158.61 -131.02 REMARK 500 PHE A 335 -10.28 72.79 REMARK 500 TRP A 341 172.69 61.16 REMARK 500 ASN A 342 41.63 36.26 REMARK 500 ALA A 377 29.43 -147.34 REMARK 500 ASP A 391 43.29 -107.95 REMARK 500 PHE A 415 53.81 -90.22 REMARK 500 GLU A 425 70.60 48.15 REMARK 500 LYS A 429 -2.17 68.27 REMARK 500 VAL A 435 136.91 70.27 REMARK 500 ASP A 526 50.63 -116.16 REMARK 500 LYS A 663 -97.24 54.74 REMARK 500 GLU A 754 61.98 60.57 REMARK 500 LYS A 870 -60.85 -90.32 REMARK 500 LEU A 908 135.56 -170.17 REMARK 500 PHE A 913 -119.61 51.30 REMARK 500 HIS A 921 -151.11 50.51 REMARK 500 LYS A 927 -77.49 -81.38 REMARK 500 THR A 928 -26.72 -145.81 REMARK 500 ASN A 951 43.19 35.71 REMARK 500 GLU A1033 18.69 59.26 REMARK 500 GLN A1039 -122.14 56.86 REMARK 500 GLN A1045 -130.24 56.16 REMARK 500 ALA A1061 -131.46 57.55 REMARK 500 ALA A1067 -54.23 -121.38 REMARK 500 PRO A1123 -176.22 -66.48 REMARK 500 PHE A1169 119.84 -162.05 REMARK 500 HIS A1171 -56.34 68.27 REMARK 500 ARG A1288 -141.12 64.20 REMARK 500 THR A1294 -7.32 -59.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 242 0.21 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 988 OD2 REMARK 620 2 DG3 A1401 O3G 101.7 REMARK 620 3 DG3 A1401 O1A 171.8 84.4 REMARK 620 4 DG3 A1401 O2A 120.4 111.4 61.0 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-53227 RELATED DB: EMDB REMARK 900 YERA41 FAMILY-A DNA POLYMERASE IN COMPLEX WITH A DNA DUPLEX DBREF1 9QLH A 1 1306 UNP A0AA86MGY1_9CAUD DBREF2 9QLH A A0AA86MGY1 1 1305 DBREF 9QLH P 2 30 PDB 9QLH 9QLH 2 30 DBREF 9QLH T -9 29 PDB 9QLH 9QLH -9 29 SEQADV 9QLH ALA A 231 UNP A0AA86MGY ASP 231 CONFLICT SEQADV 9QLH ALA A 233 UNP A0AA86MGY GLU 233 CONFLICT SEQADV 9QLH THR A 402 UNP A0AA86MGY ILE 402 CONFLICT SEQADV 9QLH ASP A 420 UNP A0AA86MGY INSERTION SEQADV 9QLH ILE A 533 UNP A0AA86MGY VAL 532 CONFLICT SEQADV 9QLH SER A 595 UNP A0AA86MGY ASN 594 CONFLICT SEQADV 9QLH LYS A 647 UNP A0AA86MGY ARG 646 CONFLICT SEQADV 9QLH GLU A 673 UNP A0AA86MGY GLY 672 CONFLICT SEQADV 9QLH LEU A 717 UNP A0AA86MGY VAL 716 CONFLICT SEQADV 9QLH GLU A 761 UNP A0AA86MGY ASP 760 CONFLICT SEQADV 9QLH VAL A 915 UNP A0AA86MGY ALA 914 CONFLICT SEQRES 1 A 1306 MET SER THR VAL LEU ILE GLY TYR VAL ASN ILE ARG PRO SEQRES 2 A 1306 GLY LYS GLY GLY LYS LEU ILE ASN GLN ASP VAL TRP LYS SEQRES 3 A 1306 TYR PHE GLU LYS TYR VAL PRO ALA HIS PHE GLU ASP VAL SEQRES 4 A 1306 ASP LEU LEU LEU PHE ASN PRO GLN THR LEU PRO ASN LEU SEQRES 5 A 1306 SER ASP MET ILE GLU ASP LEU ASN LYS TYR ASP ASN ILE SEQRES 6 A 1306 ILE VAL THR GLY ARG GLU PRO LEU LYS TYR LEU GLY LEU SEQRES 7 A 1306 GLU ASP ALA GLU ILE ASP ARG HIS SER GLN PHE SER ASN SEQRES 8 A 1306 ASP ASP LEU ALA ASP ASP GLN GLU GLU GLU GLU GLU VAL SEQRES 9 A 1306 GLU ASP THR ASP ASN GLU GLU ASP ASP ASP SER GLU ASP SEQRES 10 A 1306 ASP GLU SER GLY GLU GLU SER ASP GLY ASP ASP ASP ASP SEQRES 11 A 1306 ASP ASP GLU PHE LYS VAL LYS LYS THR LYS LYS SER ASP SEQRES 12 A 1306 ASN LYS ILE GLU VAL MET ARG TYR PHE GLY LEU ILE ASN SEQRES 13 A 1306 ASN ASN PRO ALA LEU LYS PHE ASN LYS ILE HIS VAL MET SEQRES 14 A 1306 TYR SER LEU MET MET TYR ILE ALA LYS ASP LYS ILE ASN SEQRES 15 A 1306 VAL PHE HIS PHE ASP LEU LEU ASN ARG THR GLY LYS ASN SEQRES 16 A 1306 ASN LEU VAL PRO PRO MET VAL GLN ILE ASP PRO LYS PHE SEQRES 17 A 1306 HIS HIS ILE SER GLU LEU GLU SER ILE TYR HIS SER LYS SEQRES 18 A 1306 TRP GLN PRO ASP GLU HIS LYS GLY PHE ALA PHE ALA THR SEQRES 19 A 1306 ARG ASN PHE PRO PHE GLU PRO ARG PHE ARG LEU LEU GLY SEQRES 20 A 1306 PHE SER LEU ALA ASN ASP THR TYR GLN ALA TYR PHE TYR SEQRES 21 A 1306 PHE SER ARG ASP ASP ASP LYS TYR ALA GLN GLU MET GLU SEQRES 22 A 1306 GLN TYR ARG SER VAL MET VAL LYS ILE PHE LEU GLU ASP SEQRES 23 A 1306 ALA LYS LYS LEU HIS THR TYR ASN ASN LYS PHE GLU ASN SEQRES 24 A 1306 ASN ALA VAL LEU ASP GLN LEU ARG GLU ARG ILE PHE PHE SEQRES 25 A 1306 GLU ASP SER ARG ILE TYR THR GLN MET LEU LYS THR ARG SEQRES 26 A 1306 GLY SER LEU LYS PHE SER ALA ASN LEU PHE LEU GLY VAL SEQRES 27 A 1306 PRO VAL TRP ASN GLU GLY ILE ASN THR PHE MET LYS ASN SEQRES 28 A 1306 TYR LYS GLU PHE VAL ALA TRP MET LYS ASP TYR ARG GLU SEQRES 29 A 1306 LEU SER MET ILE GLU GLU SER VAL ILE ASP LYS ASN ALA SEQRES 30 A 1306 TYR GLU ILE THR SER ILE LYS ASP LEU LEU SER SER ASP SEQRES 31 A 1306 ASP LYS SER THR LEU ILE LYS LEU LEU GLY LEU THR GLU SEQRES 32 A 1306 THR ASP LYS VAL LYS ASP ARG SER ARG LEU GLU PHE LYS SEQRES 33 A 1306 LEU THR ASP ASP GLY ASP LYS LYS GLU PRO THR TYR LYS SEQRES 34 A 1306 LEU THR THR TYR VAL VAL GLU THR TYR PHE ASP LEU LEU SEQRES 35 A 1306 LEU ASP PRO ILE LYS PHE VAL GLU LYS ALA MET GLU HIS SEQRES 36 A 1306 SER GLN LYS TYR GLU GLN SER PHE PHE LYS PHE PHE MET SEQRES 37 A 1306 THR TYR GLN ASP ARG LEU GLU GLY LYS PHE LYS LEU THR SEQRES 38 A 1306 ASN LEU LEU THR TYR PHE ILE LYS ASN TYR ASN GLU TRP SEQRES 39 A 1306 GLN SER CYS GLY ILE GLY ASP MET GLY TYR TYR CYS ILE SEQRES 40 A 1306 LEU ASP GLY TYR TYR THR VAL LYS LEU LYS GLU MET LEU SEQRES 41 A 1306 TYR ASP THR ASN TYR ASP GLY CYS ALA ASP GLY TYR ILE SEQRES 42 A 1306 TYR TYR LEU TYR GLN SER HIS PHE ALA SER LEU LEU GLU SEQRES 43 A 1306 ALA ASN LYS VAL HIS ILE ASP LYS SER ARG PHE VAL ASP SEQRES 44 A 1306 TRP MET LYS TRP ALA TYR GLU THR ARG MET TYR HIS ALA SEQRES 45 A 1306 LYS LYS VAL ALA LEU HIS PRO LYS VAL VAL GLU ASN TYR SEQRES 46 A 1306 SER LYS SER LEU TYR LYS LYS LYS PHE SER GLY VAL ILE SEQRES 47 A 1306 LYS THR ASN ILE GLU SER VAL ILE LYS SER TYR ASN GLY SEQRES 48 A 1306 ASN LYS ARG VAL VAL ALA ALA GLU LEU SER PHE VAL ILE SEQRES 49 A 1306 LYS TYR GLN GLY LYS ASP LEU GLU GLU MET ILE LYS THR SEQRES 50 A 1306 TYR TYR GLU HIS LEU ALA VAL GLY ARG LYS ALA LEU VAL SEQRES 51 A 1306 ASP HIS ILE ASN GLU THR GLY ASN ALA LYS LEU THR LYS SEQRES 52 A 1306 THR GLN LYS GLY LYS ILE ILE GLY LYS GLU PHE THR ASN SEQRES 53 A 1306 ASP ASP LYS ILE ILE HIS LYS PHE ILE GLU ILE ILE ASP SEQRES 54 A 1306 LYS LYS TYR LYS LEU ALA PHE PHE GLY THR ASN PRO PRO SEQRES 55 A 1306 ILE ALA ASP ARG ILE ALA VAL ILE SER GLN PHE ILE ASN SEQRES 56 A 1306 HIS LEU TYR ASN ARG ALA GLU GLY MET VAL ASN ILE THR SEQRES 57 A 1306 TYR GLU ASP VAL LYS GLN GLU TYR LEU ASP ARG VAL ASN SEQRES 58 A 1306 SER SER THR ASP TYR TYR ASP ILE ASP ARG TYR LEU GLU SEQRES 59 A 1306 PHE SER SER THR ARG HIS GLU ALA ARG LEU ARG MET THR SEQRES 60 A 1306 ASN ALA VAL ILE PRO ALA GLY HIS GLU MET VAL ILE LEU SEQRES 61 A 1306 GLN PHE LEU LEU VAL ASN ARG LEU LYS SER THR SER ILE SEQRES 62 A 1306 ASP HIS GLU PHE ILE ASP LYS MET PRO SER ASP GLU PHE SEQRES 63 A 1306 GLY GLU TYR LEU VAL ASP LEU VAL LYS ARG GLY ASN LEU SEQRES 64 A 1306 ALA GLU ALA GLY GLN GLY LYS ARG LEU SER ALA ALA ASP SEQRES 65 A 1306 LYS ILE ILE LEU LEU GLU VAL LYS THR ALA LYS GLY THR SEQRES 66 A 1306 LEU SER LYS ILE LEU SER GLY GLU LYS LEU GLY LYS HIS SEQRES 67 A 1306 ALA LEU ARG THR ILE LYS GLN ALA TRP ASP PHE LYS ASN SEQRES 68 A 1306 GLY ARG LYS ASN SER LEU ASP GLU TYR PRO ASP PHE ILE SEQRES 69 A 1306 GLN LEU ILE TYR HIS LEU GLN LEU LEU LYS ARG HIS ASN SEQRES 70 A 1306 LYS SER ILE SER THR VAL ILE GLU GLY SER LEU GLY GLY SEQRES 71 A 1306 GLY SER PHE ILE VAL SER HIS LYS ASP SER HIS ILE PRO SEQRES 72 A 1306 ILE GLY PRO LYS THR SER TRP LYS ASP ILE GLU ASN LEU SEQRES 73 A 1306 PRO GLU ASP THR GLN ILE PHE TYR LYS THR THR TYR TRP SEQRES 74 A 1306 GLN ASN ASP LYS ASP THR LEU ARG TRP SER SER SER PHE SEQRES 75 A 1306 HIS THR ILE PRO SER THR LEU ASP TYR SER LEU CYS PHE SEQRES 76 A 1306 THR PRO ARG LYS GLU GLY ARG MET PHE PHE HIS MET ASP SEQRES 77 A 1306 MET ALA GLN ALA GLU VAL ARG ILE ALA PHE ALA VAL ALA SEQRES 78 A 1306 LYS GLU MET GLY LEU ILE ASN ALA ILE LEU LYS GLY LEU SEQRES 79 A 1306 ASP ILE HIS GLY PHE ASN ALA ASN ASN ALA PHE ASP LEU SEQRES 80 A 1306 GLY PHE ALA GLU ASP GLU LEU TYR LYS ILE LYS GLN ASP SEQRES 81 A 1306 PRO GLU LEU ASP GLN LEU ARG SER TYR ALA LYS MET LEU SEQRES 82 A 1306 THR PHE ALA ILE LEU TYR GLY ALA SER VAL GLY SER ILE SEQRES 83 A 1306 ALA LYS GLN ILE LYS LYS PRO PHE ASP GLU ALA LYS LYS SEQRES 84 A 1306 ILE TYR ASP GLY TYR PHE ASN ALA ASN PRO ASN PHE LYS SEQRES 85 A 1306 LYS PHE VAL GLU ASP ASN ILE ALA GLU LEU SER GLU ASN SEQRES 86 A 1306 PHE GLY PHE ARG TYR LEU PRO ILE PHE ASN HIS ARG PHE SEQRES 87 A 1306 TYR ILE GLY ASN PRO TYR HIS TYR SER ILE LYS GLN LYS SEQRES 88 A 1306 GLY LEU ASN TYR ILE ILE GLN ASN LEU SER SER SER LEU SEQRES 89 A 1306 THR ALA TYR THR ALA TYR ALA LEU TYR ASP ASP LEU ARG SEQRES 90 A 1306 THR ASN TYR GLY VAL GLU ILE GLN LEU LEU GLY PHE VAL SEQRES 91 A 1306 HIS ASP ALA ILE GLU PHE GLU PHE ASP ALA LYS ASP LEU SEQRES 92 A 1306 PHE ILE ILE LEU ASP ARG MET ASN TYR TRP TYR LYS GLU SEQRES 93 A 1306 MET PRO LEU GLU LYS TRP ASP ILE PRO SER ASP PHE ASP SEQRES 94 A 1306 PHE GLU LEU GLY SER SER ARG TYR SER GLY GLY SER CYS SEQRES 95 A 1306 LYS VAL LYS TYR ASN ASP ASP LYS SER MET ALA ASP ILE SEQRES 96 A 1306 LYS LEU GLU ILE LYS ASP TYR TYR ASN ASP LYS GLU ASP SEQRES 97 A 1306 ILE LEU LYS LEU MET LYS GLU SER PHE ASN ILE ILE GLU SEQRES 98 A 1306 ASP SER LEU LYS LYS GLU ASP HIS PRO VAL GLU LYS HIS SEQRES 99 A 1306 PRO PHE VAL PHE MET ILE ASP GLY VAL LYS PRO ASP CYS SEQRES 100 A 1306 ARG PHE ARG GLU GLU VAL THR ASP GLN TYR VAL TYR SER SEQRES 101 A 1306 ALA LYS ILE GLY LEU LYS SEQRES 1 P 29 DC DA DC DA DG DA DC DG DT DA DG DC DA SEQRES 2 P 29 DG DC DT DG DG DA DA DC DC DT DC DC DG SEQRES 3 P 29 DT DA DG SEQRES 1 T 39 DA DA DA DA DT DC DC DC DC DC DC DT DA SEQRES 2 T 39 DC DG DG DA DG DG DT DT DC DC DA DG DC SEQRES 3 T 39 DT DG DC DT DA DC DG DT DC DT DG DT DG HET DG3 A1401 30 HET MG A1402 1 HETNAM DG3 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 4 DG3 C10 H16 N5 O12 P3 FORMUL 5 MG MG 2+ HELIX 1 AA1 GLY A 14 PHE A 36 1 23 HELIX 2 AA2 ASN A 51 ASN A 60 1 10 HELIX 3 AA3 GLY A 69 LEU A 76 1 8 HELIX 4 AA4 SER A 142 ARG A 150 1 9 HELIX 5 AA5 ASP A 179 HIS A 185 1 7 HELIX 6 AA6 HIS A 210 SER A 212 5 3 HELIX 7 AA7 GLU A 213 LYS A 221 1 9 HELIX 8 AA8 ASP A 264 ASP A 286 1 23 HELIX 9 AA9 ASN A 294 LEU A 306 1 13 HELIX 10 AB1 SER A 315 LEU A 322 1 8 HELIX 11 AB2 ASN A 342 ASP A 374 1 33 HELIX 12 AB3 SER A 382 SER A 389 1 8 HELIX 13 AB4 ASP A 391 LEU A 398 1 8 HELIX 14 AB5 ASP A 440 LEU A 443 5 4 HELIX 15 AB6 ASP A 444 SER A 456 1 13 HELIX 16 AB7 PHE A 464 GLY A 476 1 13 HELIX 17 AB8 LYS A 479 ASN A 490 1 12 HELIX 18 AB9 TRP A 494 GLY A 498 5 5 HELIX 19 AC1 GLY A 500 TYR A 521 1 22 HELIX 20 AC2 GLY A 531 ASN A 548 1 18 HELIX 21 AC3 LYS A 554 LEU A 577 1 24 HELIX 22 AC4 HIS A 578 TYR A 609 1 32 HELIX 23 AC5 VAL A 616 TYR A 626 1 11 HELIX 24 AC6 GLU A 633 THR A 656 1 24 HELIX 25 AC7 LYS A 663 ILE A 670 1 8 HELIX 26 AC8 THR A 675 TYR A 692 1 18 HELIX 27 AC9 PRO A 702 MET A 724 1 23 HELIX 28 AD1 THR A 728 SER A 743 1 16 HELIX 29 AD2 ASP A 745 GLU A 754 1 10 HELIX 30 AD3 ARG A 759 ILE A 771 1 13 HELIX 31 AD4 HIS A 775 LYS A 789 1 15 HELIX 32 AD5 HIS A 795 LYS A 800 1 6 HELIX 33 AD6 PRO A 802 ALA A 822 1 21 HELIX 34 AD7 SER A 829 GLY A 852 1 24 HELIX 35 AD8 GLY A 856 ASN A 871 1 16 HELIX 36 AD9 PRO A 881 ILE A 904 1 24 HELIX 37 AE1 SER A 929 LEU A 936 1 8 HELIX 38 AE2 PHE A 962 ILE A 965 5 4 HELIX 39 AE3 TYR A 971 PHE A 975 5 5 HELIX 40 AE4 GLN A 991 ALA A 1001 1 11 HELIX 41 AE5 GLU A 1003 GLY A 1013 1 11 HELIX 42 AE6 ASP A 1015 ALA A 1021 1 7 HELIX 43 AE7 ALA A 1021 LEU A 1027 1 7 HELIX 44 AE8 LEU A 1046 TYR A 1059 1 14 HELIX 45 AE9 PRO A 1073 PHE A 1085 1 13 HELIX 46 AF1 LYS A 1093 ASN A 1105 1 13 HELIX 47 AF2 SER A 1127 GLY A 1161 1 35 HELIX 48 AF3 ASP A 1182 LYS A 1195 1 14 HELIX 49 AF4 LYS A 1195 ASP A 1203 1 9 HELIX 50 AF5 TYR A 1242 PHE A 1257 1 16 HELIX 51 AF6 ARG A 1288 VAL A 1293 1 6 SHEET 1 AA1 3 VAL A 39 PHE A 44 0 SHEET 2 AA1 3 THR A 3 TYR A 8 1 N LEU A 5 O ASP A 40 SHEET 3 AA1 3 ASN A 64 VAL A 67 1 O ILE A 66 N VAL A 4 SHEET 1 AA2 6 LYS A 207 HIS A 209 0 SHEET 2 AA2 6 GLN A 256 TYR A 260 1 O TYR A 258 N HIS A 209 SHEET 3 AA2 6 LEU A 245 ALA A 251 -1 N PHE A 248 O PHE A 259 SHEET 4 AA2 6 LYS A 228 THR A 234 -1 N GLY A 229 O ALA A 251 SHEET 5 AA2 6 LEU A 290 THR A 292 1 O HIS A 291 N PHE A 230 SHEET 6 AA2 6 GLU A 313 ASP A 314 1 O GLU A 313 N LEU A 290 SHEET 1 AA3 2 VAL A 550 ILE A 552 0 SHEET 2 AA3 2 ILE A 942 TYR A 944 -1 O ILE A 942 N ILE A 552 SHEET 1 AA4 2 TYR A 948 TRP A 949 0 SHEET 2 AA4 2 SER A 959 SER A 960 -1 O SER A 959 N TRP A 949 SHEET 1 AA5 4 GLN A1165 GLY A1168 0 SHEET 2 AA5 4 ALA A1173 ASP A1179 -1 O GLU A1175 N GLY A1168 SHEET 3 AA5 4 ARG A 982 ALA A 990 -1 N PHE A 985 O PHE A1176 SHEET 4 AA5 4 ASP A1207 GLY A1213 -1 O GLU A1211 N HIS A 986 SHEET 1 AA6 3 ILE A1235 LYS A1240 0 SHEET 2 AA6 3 GLN A1296 GLY A1304 -1 O TYR A1299 N LEU A1237 SHEET 3 AA6 3 ASN A1258 LYS A1266 -1 N ILE A1260 O LYS A1302 LINK OD2 ASP A 988 MG MG A1402 1555 1555 2.78 LINK O3G DG3 A1401 MG MG A1402 1555 1555 2.72 LINK O1A DG3 A1401 MG MG A1402 1555 1555 2.76 LINK O2A DG3 A1401 MG MG A1402 1555 1555 2.27 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 777211519 CONECT1148911490114911149211493 CONECT1149011489 CONECT1149111489 CONECT114921148911519 CONECT114931148911494 CONECT1149411493114951149611497 CONECT1149511494 CONECT1149611494 CONECT114971149411498 CONECT1149811497114991150011501 CONECT114991149811519 CONECT115001149811519 CONECT115011149811502 CONECT115021150111503 CONECT11503115021150411505 CONECT115041150311507 CONECT115051150311506 CONECT115061150511507 CONECT11507115041150611508 CONECT11508115071150911518 CONECT115091150811510 CONECT115101150911511 CONECT11511115101151211518 CONECT11512115111151311514 CONECT1151311512 CONECT115141151211515 CONECT11515115141151611517 CONECT1151611515 CONECT115171151511518 CONECT11518115081151111517 CONECT11519 7772114921149911500 MASTER 285 0 2 51 20 0 0 611516 3 32 107 END