HEADER REPLICATION 02-JUL-25 9RTJ TITLE HYDRID STRUCTURE OF THE HELIX BUNDLE DOMAIN OF PRN1 PRIMASE IN COMPLEX TITLE 2 WITH DNA, ATP AND DGTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SF3 HELICASE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'); COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROLOBUS ISLANDICUS; SOURCE 3 ORGANISM_TAXID: 43080; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SACCHAROLOBUS ISLANDICUS; SOURCE 9 ORGANISM_TAXID: 43080 KEYWDS PRIMASE, HBD, DINUCLEOTIDE, FIRST BASE-PAIR, REPLICATION EXPDTA SOLUTION NMR; SOLID-STATE NMR NUMMDL 20 AUTHOR P.WU,F.F.DAMBERGER,J.ZEHNDER,N.SCHRODER,G.LIPPS,T.WIEGAND,F.H.- AUTHOR 2 T.ALLAIN REVDAT 1 25-MAR-26 9RTJ 0 JRNL AUTH P.WU,F.F.DAMBERGER,J.ZEHNDER,N.SCHRODER,G.LIPPS,T.WIEGAND, JRNL AUTH 2 F.H.-T.ALLAIN JRNL TITL MOLECULAR BASIS FOR PRIMER SYNTHESIS INITIATION BY DNA JRNL TITL 2 PRIMASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.98.15, AMBER 20 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), CASE, REMARK 3 DARDEN, CHEATHAM III, SIMMERLING, WANG, DUKE, LUO, REMARK 3 ... AND KOLLMAN (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9RTJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1292148613. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298; 298; 278 REMARK 210 PH : 7.0; 7.0; 7.0; 7.0; 7.0 REMARK 210 IONIC STRENGTH : 100; 75; 50; 120; 50 REMARK 210 PRESSURE : 1 ATM; 1 ATM; 1 ATM; 1 ATM; 1 REMARK 210 ATM REMARK 210 SAMPLE CONTENTS : 0.96 MM DNA, 0.8 MM [U-99% 13C; REMARK 210 U-99% 15N] HBD, 2.4 MM APPCP, REMARK 210 2.4 MM DGPPCP, 10 MM MG2+, 90% REMARK 210 H2O/10% D2O; 1 MM DNA, 1 MM [U- REMARK 210 99% 13C; U-99% 15N] HBD, 1.2 MM REMARK 210 APPCP, 1.2 MM DGPPCP, 10 MM MG2+, REMARK 210 100% D2O; 10.8 MM DNA, 0.8 MM REMARK 210 [U-99% 13C; U-99% 15N] HBD, 1.6 REMARK 210 MM APPCP, 1.6 MM DGPPCP, 10 MM REMARK 210 MG2+, 100% D2O; 1.1 MM DNA, 1 MM REMARK 210 [U-99% 13C; U-99% 15N] HBD, 1.2 REMARK 210 MM APPCP, 1.2 MM DGPPCP, 10 MM REMARK 210 MG2+, 90% H2O/10% D2O; 1 MM DNA, REMARK 210 1 MM HBD, 2 MM APPCP, 2 MM REMARK 210 DGPPCP, 10 MM MG2+, 90% H2O/10% REMARK 210 D2O; 1 MM DNA, 1 MM HBD, 1.2 MM REMARK 210 APPCP, 1.2 MM DGPPCP, 10 MM MG2+, REMARK 210 100% D2O; 0.254 MM DNA, 0.231 REMARK 210 MM [U-100% 15N; U-80% 2H] PRN1 REMARK 210 PRIMASE H145A, 0.924 MM APPNHP, REMARK 210 0.924 MM DGPPCP, 10 MM MG2+, 90% REMARK 210 H2O/10% D2O; 4 MM DNA, 4 MM HBD, REMARK 210 4 MM APPCP, 4 MM DGPPCP, 10 MM REMARK 210 MG2+, 90% H2O/10% D2O; 2.5 MM REMARK 210 DNA, 2.3 MM [U-100% 13C; U-100% REMARK 210 15N] PRN1 PRIMASE H145A, 4.6 MM REMARK 210 APPCP, 4.6 MM DGPPCP, 10 MM MG2+, REMARK 210 90% H2O/10% D2O; 0.254 MM DNA, REMARK 210 0.231 MM [U-15N; U-2H] PRN1 REMARK 210 PRIMASE, 0.924 MM APPNHP, 0.924 REMARK 210 MM DGPPCP, 10 MM MG2+, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCA; 3D HN(CA)CO; 3D REMARK 210 HN(CO)CA; 3D HNCACB; 3D CBCA(CO)NH; 3D HNCO; 3D C(CO)NH; 3D REMARK 210 H(CCO)NH; 3D 1H-15N NOESY; 3D 1H-13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; 2D 1H-13C HSQC AROMATIC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D-F1FF2F-NOESY; 2D-F2F-NOESY; 3D-13C-ALIPHATIC- REMARK 210 HFILTEREDHEDITED-NOESY; 3D-13C-AROMATIC-HFILTEREDHEDITED-NOESY; REMARK 210 2D-IMINO-NOESY; 2D-NATURAL-ABUNDANCE-NHSQC; 2D-NATURAL-ABUNDANCE- REMARK 210 CHSQC-ALIPHATIC; 2D-NATURAL-ABUNDANCE-CHSQC-AROMATIC; 2D 1H-15N REMARK 210 HSQC; CHHP; NHHP; HPH REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 700 MHZ; 600 MHZ; 500 REMARK 210 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD; AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRFAM-SPARKY 1.470, CANDID, REMARK 210 TOPSPIN 4.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 DC A 1 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 1 DT A 2 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 1 DG A 3 O4' - C1' - N9 ANGL. DEV. = 4.3 DEGREES REMARK 500 1 DT A 4 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 1 DG A 5 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 1 DC A 6 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 1 DT A 7 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 1 DC A 8 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 1 DA A 9 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 2 DC A 1 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 2 DG A 3 O4' - C1' - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 2 DT A 4 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 2 DG A 5 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 2 DC A 6 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 2 DT A 7 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 2 DT A 7 C6 - C5 - C7 ANGL. DEV. = -3.9 DEGREES REMARK 500 2 DC A 8 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 2 DA A 9 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 3 DC A 1 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 3 DT A 2 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 3 DT A 2 C6 - C5 - C7 ANGL. DEV. = -3.7 DEGREES REMARK 500 3 DG A 3 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 3 DT A 4 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 3 DG A 5 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 3 DC A 6 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 3 DT A 7 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 3 DC A 8 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 3 DA A 9 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 4 DC A 1 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 4 DT A 2 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 4 DG A 3 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 4 DT A 4 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 4 DG A 5 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 4 DC A 6 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 4 DT A 7 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 4 DT A 7 C6 - C5 - C7 ANGL. DEV. = -3.8 DEGREES REMARK 500 4 DC A 8 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 4 DA A 9 O4' - C1' - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 5 DC A 1 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 5 DT A 2 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 5 DG A 3 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 5 DT A 4 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 5 DG A 5 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 5 DC A 6 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 5 DT A 7 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 5 DC A 8 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 5 DA A 9 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 6 DC A 1 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 6 DT A 2 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 6 DG A 3 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 191 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL B 257 17.23 55.45 REMARK 500 1 VAL B 258 18.99 54.04 REMARK 500 1 LYS B 286 -153.44 -105.48 REMARK 500 1 SER B 287 71.53 -113.22 REMARK 500 1 ASN B 306 65.44 61.52 REMARK 500 1 GLU B 343 -22.19 -150.10 REMARK 500 1 ASN B 344 95.79 31.75 REMARK 500 2 THR B 256 70.79 57.40 REMARK 500 2 LYS B 286 -153.83 -111.12 REMARK 500 2 SER B 287 69.65 -115.92 REMARK 500 2 ASN B 306 64.74 60.95 REMARK 500 2 VAL B 325 59.83 -104.21 REMARK 500 2 GLU B 343 -19.90 -149.48 REMARK 500 2 ASN B 344 95.80 29.55 REMARK 500 3 VAL B 257 15.92 55.27 REMARK 500 3 VAL B 258 18.26 53.68 REMARK 500 3 LYS B 286 -152.33 -104.96 REMARK 500 3 SER B 287 67.79 -116.07 REMARK 500 3 ASN B 306 62.85 62.76 REMARK 500 3 GLU B 343 -20.39 -150.41 REMARK 500 3 ASN B 344 99.69 31.31 REMARK 500 4 THR B 256 76.09 57.96 REMARK 500 4 LYS B 286 -154.83 -108.77 REMARK 500 4 SER B 287 67.78 -115.63 REMARK 500 4 ASN B 306 63.23 62.03 REMARK 500 4 GLU B 343 -19.79 -150.08 REMARK 500 4 ASN B 344 99.63 28.36 REMARK 500 5 LYS B 286 -155.54 -112.60 REMARK 500 5 SER B 287 69.72 -115.69 REMARK 500 5 ASN B 306 63.56 61.94 REMARK 500 5 GLU B 343 -8.86 -153.54 REMARK 500 5 ASN B 344 113.09 29.05 REMARK 500 6 MET B 255 -172.44 53.91 REMARK 500 6 VAL B 257 15.91 55.95 REMARK 500 6 LYS B 286 -152.81 -109.19 REMARK 500 6 SER B 287 68.02 -115.98 REMARK 500 6 ASN B 306 61.25 62.13 REMARK 500 6 GLU B 343 -5.71 -152.49 REMARK 500 6 ASN B 344 103.62 26.91 REMARK 500 7 LYS B 286 -151.20 -103.05 REMARK 500 7 SER B 287 68.94 -113.33 REMARK 500 7 ASN B 306 64.32 62.14 REMARK 500 7 GLU B 343 -24.37 -149.81 REMARK 500 7 ASN B 344 95.76 35.34 REMARK 500 8 VAL B 258 17.33 55.89 REMARK 500 8 LYS B 286 -152.41 -111.47 REMARK 500 8 SER B 287 67.70 -116.00 REMARK 500 8 ASN B 306 63.23 61.63 REMARK 500 8 GLU B 343 -17.05 -149.92 REMARK 500 8 ASN B 344 101.67 28.63 REMARK 500 REMARK 500 THIS ENTRY HAS 127 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 308 OD1 REMARK 620 2 ASP B 308 OD2 23.3 REMARK 620 3 DGT B 401 O2G 94.9 113.9 REMARK 620 4 DGT B 401 O2B 75.5 88.4 92.9 REMARK 620 5 DGT B 401 O1A 164.0 154.5 91.6 89.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 343 OE2 REMARK 620 2 ATP B 402 O1G 93.6 REMARK 620 3 ATP B 402 O1B 163.0 86.1 REMARK 620 4 ATP B 402 O1A 109.3 107.7 86.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 35007 RELATED DB: BMRB REMARK 900 HYDRID STRUCTURE OF THE HELIX BUNDLE DOMAIN OF PRN1 PRIMASE IN REMARK 900 COMPLEX WITH DNA, ATP AND DGTP DBREF 9RTJ B 256 370 UNP Q54324 Q54324_SACIS 256 370 DBREF 9RTJ A 1 9 PDB 9RTJ 9RTJ 1 9 SEQADV 9RTJ GLY B 253 UNP Q54324 EXPRESSION TAG SEQADV 9RTJ HIS B 254 UNP Q54324 EXPRESSION TAG SEQADV 9RTJ MET B 255 UNP Q54324 EXPRESSION TAG SEQRES 1 B 118 GLY HIS MET THR VAL VAL GLU PHE GLU GLU LEU ARG LYS SEQRES 2 B 118 GLU LEU VAL LYS ARG ASP SER GLY LYS PRO VAL GLU LYS SEQRES 3 B 118 ILE LYS GLU GLU ILE CYS THR LYS SER PRO PRO LYS LEU SEQRES 4 B 118 ILE LYS GLU ILE ILE CYS GLU ASN LYS THR TYR ALA ASP SEQRES 5 B 118 VAL ASN ILE ASP ARG SER ARG GLY ASP TRP HIS VAL ILE SEQRES 6 B 118 LEU TYR LEU MET LYS HIS GLY VAL THR ASP PRO ASP LYS SEQRES 7 B 118 ILE LEU GLU LEU LEU PRO ARG ASP SER LYS ALA LYS GLU SEQRES 8 B 118 ASN GLU LYS TRP ASN THR GLN LYS TYR PHE VAL ILE THR SEQRES 9 B 118 LEU SER LYS ALA TRP SER VAL VAL LYS LYS TYR LEU GLU SEQRES 10 B 118 ALA SEQRES 1 A 9 DC DT DG DT DG DC DT DC DA HET DGT B 401 42 HET ATP B 402 42 HET MG B 403 1 HET MG B 404 1 HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 DGT C10 H16 N5 O13 P3 FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 5 MG 2(MG 2+) HELIX 1 AA1 GLU B 261 ASP B 271 1 11 HELIX 2 AA2 PRO B 275 THR B 285 1 11 HELIX 3 AA3 PRO B 289 CYS B 297 1 9 HELIX 4 AA4 ASP B 308 HIS B 323 1 16 HELIX 5 AA5 ASP B 327 LEU B 335 1 9 HELIX 6 AA6 ASN B 348 ALA B 370 1 23 SSBOND 1 CYS B 284 CYS B 297 1555 1555 2.05 LINK OD1 ASP B 308 MG MG B 404 1555 1555 3.90 LINK OD2 ASP B 308 MG MG B 404 1555 1555 1.98 LINK OE2 GLU B 343 MG MG B 403 1555 1555 1.91 LINK O2G DGT B 401 MG MG B 404 1555 1555 1.88 LINK O2B DGT B 401 MG MG B 404 1555 1555 1.92 LINK O1A DGT B 401 MG MG B 404 1555 1555 1.93 LINK O1G ATP B 402 MG MG B 403 1555 1555 1.85 LINK O1B ATP B 402 MG MG B 403 1555 1555 1.97 LINK O1A ATP B 402 MG MG B 403 1555 1555 1.92 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MODEL 16 ENDMDL MODEL 17 ENDMDL MODEL 18 ENDMDL MODEL 19 ENDMDL MODEL 20 ENDMDL CONECT 528 748 CONECT 748 528 CONECT 916 2347 CONECT 917 2347 CONECT 1502 2346 CONECT 2262 2263 2264 2265 2266 CONECT 2263 2262 CONECT 2264 2262 2347 CONECT 2265 2262 CONECT 2266 2262 2267 CONECT 2267 2266 2268 2269 2270 CONECT 2268 2267 CONECT 2269 2267 2347 CONECT 2270 2267 2271 CONECT 2271 2270 2272 2273 2274 CONECT 2272 2271 2347 CONECT 2273 2271 CONECT 2274 2271 2275 CONECT 2275 2274 2276 2293 2294 CONECT 2276 2275 2277 2278 2295 CONECT 2277 2276 2281 CONECT 2278 2276 2279 2280 2296 CONECT 2279 2278 CONECT 2280 2278 2281 2297 2298 CONECT 2281 2277 2280 2282 2299 CONECT 2282 2281 2283 2292 CONECT 2283 2282 2284 2300 CONECT 2284 2283 2285 CONECT 2285 2284 2286 2292 CONECT 2286 2285 2287 2288 CONECT 2287 2286 CONECT 2288 2286 2289 2303 CONECT 2289 2288 2290 2291 CONECT 2290 2289 2301 2302 CONECT 2291 2289 2292 CONECT 2292 2282 2285 2291 CONECT 2293 2275 CONECT 2294 2275 CONECT 2295 2276 CONECT 2296 2278 CONECT 2297 2280 CONECT 2298 2280 CONECT 2299 2281 CONECT 2300 2283 CONECT 2301 2290 CONECT 2302 2290 CONECT 2303 2288 CONECT 2304 2305 2306 2307 2311 CONECT 2305 2304 2346 CONECT 2306 2304 CONECT 2307 2304 CONECT 2308 2309 2310 2311 2315 CONECT 2309 2308 2346 CONECT 2310 2308 CONECT 2311 2304 2308 CONECT 2312 2313 2314 2315 2316 CONECT 2313 2312 2346 CONECT 2314 2312 CONECT 2315 2308 2312 CONECT 2316 2312 2317 CONECT 2317 2316 2318 2335 2336 CONECT 2318 2317 2319 2320 2337 CONECT 2319 2318 2324 CONECT 2320 2318 2321 2322 2338 CONECT 2321 2320 CONECT 2322 2320 2323 2324 2339 CONECT 2323 2322 2340 CONECT 2324 2319 2322 2325 2341 CONECT 2325 2324 2326 2334 CONECT 2326 2325 2327 2342 CONECT 2327 2326 2328 CONECT 2328 2327 2329 2334 CONECT 2329 2328 2330 2331 CONECT 2330 2329 2343 2344 CONECT 2331 2329 2332 CONECT 2332 2331 2333 2345 CONECT 2333 2332 2334 CONECT 2334 2325 2328 2333 CONECT 2335 2317 CONECT 2336 2317 CONECT 2337 2318 CONECT 2338 2320 CONECT 2339 2322 CONECT 2340 2323 CONECT 2341 2324 CONECT 2342 2326 CONECT 2343 2330 CONECT 2344 2330 CONECT 2345 2332 CONECT 2346 1502 2305 2309 2313 CONECT 2347 916 917 2264 2269 CONECT 2347 2272 MASTER 283 0 4 6 0 0 0 6 1215 2 92 11 END