HEADER DNA BINDING PROTEIN 28-JUL-25 9S4W TITLE ACUB FROM GEOBACILLUS STEAROTHERMOPHILUS WITHOUT NUCLEOTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACUB FROM GEOBACILLUS STEAROTHERMOPHILUS; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: C-TERMINAL HEXA-HIS-TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 GENE: ACUB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS REPRESSOR, ACETOIN UTILIZATION OPERON, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.JANETZKY,G.J.PALM,M.LAMMERS REVDAT 1 25-FEB-26 9S4W 0 JRNL AUTH M.JANETZKY,G.J.PALM,M.LAMMERS JRNL TITL ACSA AND ACU OPERON REGULATION BY ACUB JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.105) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.822 REMARK 3 FREE R VALUE TEST SET COUNT : 1465 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2115 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3190 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.55800 REMARK 3 B22 (A**2) : -1.93200 REMARK 3 B33 (A**2) : -1.62600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.169 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.969 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3276 ; 0.009 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3251 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4456 ; 1.910 ; 1.824 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7474 ; 0.614 ; 1.749 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 402 ; 6.407 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 22 ;16.014 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 560 ;14.951 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 535 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3750 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 686 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 624 ; 0.238 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 55 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1592 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 123 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1623 ; 3.202 ; 2.926 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1624 ; 3.201 ; 2.928 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2020 ; 4.772 ; 5.214 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2021 ; 4.772 ; 5.217 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1653 ; 4.232 ; 3.577 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1654 ; 4.230 ; 3.578 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2436 ; 6.512 ; 6.284 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2437 ; 6.511 ; 6.284 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 208 NULL REMARK 3 1 B 2 B 208 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Ap 2 Ap 301 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1864 6.8996 -9.2270 REMARK 3 T TENSOR REMARK 3 T11: 0.0420 T22: 0.0076 REMARK 3 T33: 0.0369 T12: 0.0083 REMARK 3 T13: 0.0244 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.2476 L22: 1.0141 REMARK 3 L33: 1.1800 L12: 0.3729 REMARK 3 L13: -0.4232 L23: -0.8091 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: -0.0274 S13: 0.0275 REMARK 3 S21: 0.0627 S22: -0.0259 S23: 0.0159 REMARK 3 S31: -0.0395 S32: 0.0191 S33: 0.0213 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Bp 2 Bp 301 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3285 7.7464 -2.8301 REMARK 3 T TENSOR REMARK 3 T11: 0.0145 T22: 0.0234 REMARK 3 T33: 0.0573 T12: -0.0015 REMARK 3 T13: 0.0111 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.1350 L22: 1.7979 REMARK 3 L33: 0.8874 L12: -0.3069 REMARK 3 L13: -0.1740 L23: 0.7111 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: -0.0134 S13: 0.0401 REMARK 3 S21: 0.0167 S22: 0.0016 S23: -0.0609 REMARK 3 S31: -0.0005 S32: -0.0159 S33: -0.0304 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9S4W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1292149443. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0596 REMARK 200 MONOCHROMATOR : SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JUN 30, 2024 REMARK 200 DATA SCALING SOFTWARE : XSCALE JUN 30, 2024 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30440 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10900 REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.17600 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THIN PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4041A1 10% PEG 20000, 100 MM MES PH REMARK 280 6.5, CRYO: 10% PEG 20000, 15% PEG 400, 100 MM MES PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.80900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.48500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.38850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.48500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.80900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.38850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 59 REMARK 465 SER A 60 REMARK 465 ILE A 61 REMARK 465 ASN A 209 REMARK 465 LEU A 210 REMARK 465 PRO A 211 REMARK 465 GLY A 212 REMARK 465 VAL A 213 REMARK 465 THR A 214 REMARK 465 SER A 215 REMARK 465 GLY A 216 REMARK 465 SER A 217 REMARK 465 SER A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 ALA B 57 REMARK 465 SER B 58 REMARK 465 PRO B 59 REMARK 465 SER B 60 REMARK 465 ILE B 61 REMARK 465 PHE B 62 REMARK 465 HIS B 63 REMARK 465 LEU B 64 REMARK 465 HIS B 65 REMARK 465 GLU B 66 REMARK 465 HIS B 67 REMARK 465 LEU B 68 REMARK 465 GLU B 69 REMARK 465 GLY B 212 REMARK 465 VAL B 213 REMARK 465 THR B 214 REMARK 465 SER B 215 REMARK 465 GLY B 216 REMARK 465 SER B 217 REMARK 465 HIS B 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 56 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 188 H ASN A 190 1.15 REMARK 500 HG1 THR B 188 H ASN B 190 1.19 REMARK 500 NH2 ARG A 196 OE1 GLN A 199 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 16 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 16 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 103 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 GLN A 121 CB - CA - C ANGL. DEV. = -12.8 DEGREES REMARK 500 MET A 151 CG - SD - CE ANGL. DEV. = 18.8 DEGREES REMARK 500 ARG B 44 CG - CD - NE ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG B 185 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 13 150.69 178.28 REMARK 500 ALA A 57 -178.04 -66.57 REMARK 500 ARG B 55 71.28 -54.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 196 0.10 SIDE CHAIN REMARK 500 ARG B 16 0.20 SIDE CHAIN REMARK 500 ARG B 44 0.09 SIDE CHAIN REMARK 500 ARG B 185 0.21 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9S4W A 2 224 PDB 9S4W 9S4W 2 224 DBREF 9S4W B 2 224 PDB 9S4W 9S4W 2 224 SEQRES 1 A 223 ALA LEU VAL GLU GLN ALA MET LYS ALA PRO VAL ILE THR SEQRES 2 A 223 LEU ARG ALA THR ASN THR ILE ALA GLU ALA LEU GLN LEU SEQRES 3 A 223 LEU ARG HIS HIS ARG ILE ARG HIS LEU PRO VAL VAL ASP SEQRES 4 A 223 GLY GLU GLY ARG LEU LEU GLY LEU VAL THR SER GLN ASP SEQRES 5 A 223 LEU ARG ASP ALA SER PRO SER ILE PHE HIS LEU HIS GLU SEQRES 6 A 223 HIS LEU GLU ASP LEU GLN LYS PRO VAL SER THR ILE MET SEQRES 7 A 223 LYS THR ASP LEU ILE VAL GLY HIS PRO LEU ASP PHE VAL SEQRES 8 A 223 GLU GLU VAL ALA ALA LEU PHE TYR GLU HIS ARG ILE GLY SEQRES 9 A 223 CYS LEU PRO ILE VAL ASN HIS GLY LYS LEU VAL GLY ILE SEQRES 10 A 223 ILE THR GLN THR ASP LEU LEU ARG THR PHE ILE GLU LEU SEQRES 11 A 223 THR GLY VAL HIS GLN PRO GLY SER GLN ILE GLU ILE LYS SEQRES 12 A 223 VAL PRO ASN GLU ALA GLY MET LEU SER LYS ALA ALA ALA SEQRES 13 A 223 ILE ILE SER GLU ARG HIS VAL ASN ILE ALA SER VAL LEU SEQRES 14 A 223 VAL TYR PRO ALA PRO ASP PRO ASN GLU LYS ILE LEU VAL SEQRES 15 A 223 PHE ARG VAL GLN THR MET ASN PRO LEU PRO LEU ILE ARG SEQRES 16 A 223 ASP LEU GLN ASN ALA GLY TYR HIS VAL LEU TRP PRO ASN SEQRES 17 A 223 LEU PRO GLY VAL THR SER GLY SER SER HIS HIS HIS HIS SEQRES 18 A 223 HIS HIS SEQRES 1 B 223 ALA LEU VAL GLU GLN ALA MET LYS ALA PRO VAL ILE THR SEQRES 2 B 223 LEU ARG ALA THR ASN THR ILE ALA GLU ALA LEU GLN LEU SEQRES 3 B 223 LEU ARG HIS HIS ARG ILE ARG HIS LEU PRO VAL VAL ASP SEQRES 4 B 223 GLY GLU GLY ARG LEU LEU GLY LEU VAL THR SER GLN ASP SEQRES 5 B 223 LEU ARG ASP ALA SER PRO SER ILE PHE HIS LEU HIS GLU SEQRES 6 B 223 HIS LEU GLU ASP LEU GLN LYS PRO VAL SER THR ILE MET SEQRES 7 B 223 LYS THR ASP LEU ILE VAL GLY HIS PRO LEU ASP PHE VAL SEQRES 8 B 223 GLU GLU VAL ALA ALA LEU PHE TYR GLU HIS ARG ILE GLY SEQRES 9 B 223 CYS LEU PRO ILE VAL ASN HIS GLY LYS LEU VAL GLY ILE SEQRES 10 B 223 ILE THR GLN THR ASP LEU LEU ARG THR PHE ILE GLU LEU SEQRES 11 B 223 THR GLY VAL HIS GLN PRO GLY SER GLN ILE GLU ILE LYS SEQRES 12 B 223 VAL PRO ASN GLU ALA GLY MET LEU SER LYS ALA ALA ALA SEQRES 13 B 223 ILE ILE SER GLU ARG HIS VAL ASN ILE ALA SER VAL LEU SEQRES 14 B 223 VAL TYR PRO ALA PRO ASP PRO ASN GLU LYS ILE LEU VAL SEQRES 15 B 223 PHE ARG VAL GLN THR MET ASN PRO LEU PRO LEU ILE ARG SEQRES 16 B 223 ASP LEU GLN ASN ALA GLY TYR HIS VAL LEU TRP PRO ASN SEQRES 17 B 223 LEU PRO GLY VAL THR SER GLY SER SER HIS HIS HIS HIS SEQRES 18 B 223 HIS HIS HET EDO A 301 10 HET PGE B 301 24 HET CL B 302 1 HET CL B 303 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 PGE C6 H14 O4 FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *112(H2 O) HELIX 1 AA1 LEU A 3 MET A 8 1 6 HELIX 2 AA2 THR A 20 HIS A 31 1 12 HELIX 3 AA3 GLN A 52 LEU A 54 5 3 HELIX 4 AA4 HIS A 63 GLN A 72 1 10 HELIX 5 AA5 PRO A 74 ILE A 78 5 5 HELIX 6 AA6 PHE A 91 ARG A 103 1 13 HELIX 7 AA7 GLN A 121 THR A 132 1 12 HELIX 8 AA8 GLY A 150 ARG A 162 1 13 HELIX 9 AA9 PRO A 191 ALA A 201 1 11 HELIX 10 AB1 LEU B 3 MET B 8 1 6 HELIX 11 AB2 THR B 20 ARG B 29 1 10 HELIX 12 AB3 GLN B 52 ARG B 55 5 4 HELIX 13 AB4 PRO B 74 ILE B 78 5 5 HELIX 14 AB5 PHE B 91 ARG B 103 1 13 HELIX 15 AB6 GLN B 121 THR B 132 1 12 HELIX 16 AB7 GLY B 150 ARG B 162 1 13 HELIX 17 AB8 PRO B 191 ALA B 201 1 11 SHEET 1 AA1 3 LEU A 15 ARG A 16 0 SHEET 2 AA1 3 HIS A 35 VAL A 39 1 O VAL A 39 N LEU A 15 SHEET 3 AA1 3 LEU A 45 THR A 50 -1 O LEU A 46 N VAL A 38 SHEET 1 AA2 2 LEU A 83 VAL A 85 0 SHEET 2 AA2 2 HIS B 219 HIS B 221 -1 O HIS B 221 N LEU A 83 SHEET 1 AA3 2 CYS A 106 ASN A 111 0 SHEET 2 AA3 2 LYS A 114 THR A 120 -1 O GLY A 117 N ILE A 109 SHEET 1 AA4 4 ILE A 166 PRO A 173 0 SHEET 2 AA4 4 GLU A 179 VAL A 186 -1 O VAL A 183 N LEU A 170 SHEET 3 AA4 4 SER A 139 PRO A 146 -1 N VAL A 145 O LYS A 180 SHEET 4 AA4 4 HIS A 204 VAL A 205 -1 O HIS A 204 N LYS A 144 SHEET 1 AA5 3 LEU B 15 ARG B 16 0 SHEET 2 AA5 3 HIS B 35 VAL B 39 1 O VAL B 39 N LEU B 15 SHEET 3 AA5 3 LEU B 45 THR B 50 -1 O LEU B 46 N VAL B 38 SHEET 1 AA6 2 CYS B 106 ASN B 111 0 SHEET 2 AA6 2 LYS B 114 THR B 120 -1 O GLY B 117 N ILE B 109 SHEET 1 AA7 4 ILE B 166 PRO B 173 0 SHEET 2 AA7 4 GLU B 179 VAL B 186 -1 O VAL B 183 N LEU B 170 SHEET 3 AA7 4 SER B 139 PRO B 146 -1 N ILE B 143 O LEU B 182 SHEET 4 AA7 4 HIS B 204 VAL B 205 -1 O HIS B 204 N LYS B 144 CRYST1 45.618 96.777 98.970 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021921 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010104 0.00000 CONECT 6528 6529 6530 6532 6533 CONECT 6529 6528 6534 CONECT 6530 6528 6531 6535 6536 CONECT 6531 6530 6537 CONECT 6532 6528 CONECT 6533 6528 CONECT 6534 6529 CONECT 6535 6530 CONECT 6536 6530 CONECT 6537 6531 CONECT 6538 6539 6540 6548 6549 CONECT 6539 6538 6550 CONECT 6540 6538 6541 6551 6552 CONECT 6541 6540 6542 CONECT 6542 6541 6543 6553 6554 CONECT 6543 6542 6547 6555 6556 CONECT 6544 6545 6557 CONECT 6545 6544 6546 6558 6559 CONECT 6546 6545 6547 6560 6561 CONECT 6547 6543 6546 CONECT 6548 6538 CONECT 6549 6538 CONECT 6550 6539 CONECT 6551 6540 CONECT 6552 6540 CONECT 6553 6542 CONECT 6554 6542 CONECT 6555 6543 CONECT 6556 6543 CONECT 6557 6544 CONECT 6558 6545 CONECT 6559 6545 CONECT 6560 6546 CONECT 6561 6546 MASTER 407 0 4 17 20 0 0 6 3318 2 34 36 END