HEADER DNA BINDING PROTEIN 28-JUL-25 9S4Z TITLE ACUB FROM GEOBACILLUS STEAROTHERMOPHILUS WITH AMP AND ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACUB FROM GEOBACILLUS STEAROTHERMOPHILUS; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: C-TERMINAL HEXA-HIS-TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS REPRESSOR, ACETOIN UTILIZATION OPERON, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.JANETZKY,G.J.PALM,M.LAMMERS REVDAT 1 25-FEB-26 9S4Z 0 JRNL AUTH M.JANETZKY,G.J.PALM,M.LAMMERS JRNL TITL ACSA AND ACU OPERON REGULATION BY ACUB JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.105) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 15660 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 808 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 755 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE SET COUNT : 33 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3099 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.93400 REMARK 3 B22 (A**2) : -0.56400 REMARK 3 B33 (A**2) : -4.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.636 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.295 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.251 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.007 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3283 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3216 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4486 ; 1.701 ; 1.822 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7396 ; 0.544 ; 1.745 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 392 ; 6.451 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 22 ; 8.622 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 551 ;16.130 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 545 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3690 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 674 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 540 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 43 ; 0.260 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1542 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 65 ; 0.165 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1580 ; 5.575 ; 6.206 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1580 ; 5.575 ; 6.207 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1968 ; 7.644 ;11.139 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1969 ; 7.644 ;11.141 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1703 ; 6.712 ; 6.949 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1704 ; 6.710 ; 6.950 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2518 ; 9.610 ;12.496 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2519 ; 9.608 ;12.495 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 208 NULL REMARK 3 1 B 2 B 208 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Ap 2 Ap 303 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3018 6.9128 -10.0708 REMARK 3 T TENSOR REMARK 3 T11: 0.0025 T22: 0.0293 REMARK 3 T33: 0.0374 T12: -0.0018 REMARK 3 T13: 0.0084 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 1.4655 L22: 3.6310 REMARK 3 L33: 2.6662 L12: 1.6641 REMARK 3 L13: -1.4307 L23: -1.8822 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: -0.0386 S13: 0.0780 REMARK 3 S21: 0.0731 S22: 0.0009 S23: 0.2459 REMARK 3 S31: -0.0181 S32: -0.0456 S33: -0.0125 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Bp 2 Bp 303 REMARK 3 ORIGIN FOR THE GROUP (A): -7.6291 9.4647 -3.3699 REMARK 3 T TENSOR REMARK 3 T11: 0.0298 T22: 0.0511 REMARK 3 T33: 0.0795 T12: 0.0076 REMARK 3 T13: 0.0131 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 0.8206 L22: 4.0307 REMARK 3 L33: 0.7051 L12: 0.0365 REMARK 3 L13: -0.1276 L23: 0.4634 REMARK 3 S TENSOR REMARK 3 S11: -0.0335 S12: -0.0764 S13: 0.2212 REMARK 3 S21: 0.1865 S22: 0.0477 S23: 0.2043 REMARK 3 S31: 0.0646 S32: -0.0020 S33: -0.0142 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9S4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUL-25. REMARK 100 THE DEPOSITION ID IS D_1292149455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05960 REMARK 200 MONOCHROMATOR : SILICON 111 REMARK 200 OPTICS : DOUBLE MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 19, 2025 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION JAN 19, 2025 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15706 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.620 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70200 REMARK 200 FOR SHELL : 2.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THIN PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 20000, 100 MM MES PH 6.5, REMARK 280 SOAKED 30 MIN IN 5 MM AMP + 5 MM ADP CRYO: 10% PEG 20000, 15% REMARK 280 PEG 400, 100 MM MES PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.14900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.69050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.33400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.69050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.14900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.33400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 57 REMARK 465 SER A 58 REMARK 465 PRO A 59 REMARK 465 SER A 60 REMARK 465 ILE A 61 REMARK 465 PHE A 62 REMARK 465 HIS A 63 REMARK 465 LEU A 64 REMARK 465 ASN A 209 REMARK 465 LEU A 210 REMARK 465 PRO A 211 REMARK 465 GLY A 212 REMARK 465 VAL A 213 REMARK 465 THR A 214 REMARK 465 SER A 215 REMARK 465 GLY A 216 REMARK 465 SER A 217 REMARK 465 SER A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 ALA B 57 REMARK 465 SER B 58 REMARK 465 PRO B 59 REMARK 465 SER B 60 REMARK 465 ILE B 61 REMARK 465 PHE B 62 REMARK 465 HIS B 63 REMARK 465 LEU B 64 REMARK 465 HIS B 65 REMARK 465 GLU B 66 REMARK 465 HIS B 67 REMARK 465 LEU B 210 REMARK 465 PRO B 211 REMARK 465 GLY B 212 REMARK 465 VAL B 213 REMARK 465 THR B 214 REMARK 465 SER B 215 REMARK 465 GLY B 216 REMARK 465 SER B 217 REMARK 465 SER B 218 REMARK 465 HIS B 219 REMARK 465 HIS B 220 REMARK 465 HIS B 221 REMARK 465 HIS B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR B 188 H ASN B 190 1.24 REMARK 500 HG1 THR A 188 H ASN A 190 1.29 REMARK 500 OD1 ASP B 123 HO3' ADP B 301 1.57 REMARK 500 HH TYR A 100 OE1 GLU B 130 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 189 CG - SD - CE ANGL. DEV. = 12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 137 131.89 -38.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 16 0.13 SIDE CHAIN REMARK 500 ARG A 162 0.07 SIDE CHAIN REMARK 500 ARG B 162 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9S4Z A 2 224 PDB 9S4Z 9S4Z 2 224 DBREF 9S4Z B 2 224 PDB 9S4Z 9S4Z 2 224 SEQRES 1 A 223 ALA LEU VAL GLU GLN ALA MET LYS ALA PRO VAL ILE THR SEQRES 2 A 223 LEU ARG ALA THR ASN THR ILE ALA GLU ALA LEU GLN LEU SEQRES 3 A 223 LEU ARG HIS HIS ARG ILE ARG HIS LEU PRO VAL VAL ASP SEQRES 4 A 223 GLY GLU GLY ARG LEU LEU GLY LEU VAL THR SER GLN ASP SEQRES 5 A 223 LEU ARG ASP ALA SER PRO SER ILE PHE HIS LEU HIS GLU SEQRES 6 A 223 HIS LEU GLU ASP LEU GLN LYS PRO VAL SER THR ILE MET SEQRES 7 A 223 LYS THR ASP LEU ILE VAL GLY HIS PRO LEU ASP PHE VAL SEQRES 8 A 223 GLU GLU VAL ALA ALA LEU PHE TYR GLU HIS ARG ILE GLY SEQRES 9 A 223 CYS LEU PRO ILE VAL ASN HIS GLY LYS LEU VAL GLY ILE SEQRES 10 A 223 ILE THR GLN THR ASP LEU LEU ARG THR PHE ILE GLU LEU SEQRES 11 A 223 THR GLY VAL HIS GLN PRO GLY SER GLN ILE GLU ILE LYS SEQRES 12 A 223 VAL PRO ASN GLU ALA GLY MET LEU SER LYS ALA ALA ALA SEQRES 13 A 223 ILE ILE SER GLU ARG HIS VAL ASN ILE ALA SER VAL LEU SEQRES 14 A 223 VAL TYR PRO ALA PRO ASP PRO ASN GLU LYS ILE LEU VAL SEQRES 15 A 223 PHE ARG VAL GLN THR MET ASN PRO LEU PRO LEU ILE ARG SEQRES 16 A 223 ASP LEU GLN ASN ALA GLY TYR HIS VAL LEU TRP PRO ASN SEQRES 17 A 223 LEU PRO GLY VAL THR SER GLY SER SER HIS HIS HIS HIS SEQRES 18 A 223 HIS HIS SEQRES 1 B 223 ALA LEU VAL GLU GLN ALA MET LYS ALA PRO VAL ILE THR SEQRES 2 B 223 LEU ARG ALA THR ASN THR ILE ALA GLU ALA LEU GLN LEU SEQRES 3 B 223 LEU ARG HIS HIS ARG ILE ARG HIS LEU PRO VAL VAL ASP SEQRES 4 B 223 GLY GLU GLY ARG LEU LEU GLY LEU VAL THR SER GLN ASP SEQRES 5 B 223 LEU ARG ASP ALA SER PRO SER ILE PHE HIS LEU HIS GLU SEQRES 6 B 223 HIS LEU GLU ASP LEU GLN LYS PRO VAL SER THR ILE MET SEQRES 7 B 223 LYS THR ASP LEU ILE VAL GLY HIS PRO LEU ASP PHE VAL SEQRES 8 B 223 GLU GLU VAL ALA ALA LEU PHE TYR GLU HIS ARG ILE GLY SEQRES 9 B 223 CYS LEU PRO ILE VAL ASN HIS GLY LYS LEU VAL GLY ILE SEQRES 10 B 223 ILE THR GLN THR ASP LEU LEU ARG THR PHE ILE GLU LEU SEQRES 11 B 223 THR GLY VAL HIS GLN PRO GLY SER GLN ILE GLU ILE LYS SEQRES 12 B 223 VAL PRO ASN GLU ALA GLY MET LEU SER LYS ALA ALA ALA SEQRES 13 B 223 ILE ILE SER GLU ARG HIS VAL ASN ILE ALA SER VAL LEU SEQRES 14 B 223 VAL TYR PRO ALA PRO ASP PRO ASN GLU LYS ILE LEU VAL SEQRES 15 B 223 PHE ARG VAL GLN THR MET ASN PRO LEU PRO LEU ILE ARG SEQRES 16 B 223 ASP LEU GLN ASN ALA GLY TYR HIS VAL LEU TRP PRO ASN SEQRES 17 B 223 LEU PRO GLY VAL THR SER GLY SER SER HIS HIS HIS HIS SEQRES 18 B 223 HIS HIS HET ADP A 301 39 HET ADP A 302 39 HET PEG A 303 17 HET CL A 304 1 HET ADP B 301 39 HET AMP B 302 35 HET PEG B 303 17 HET CL B 304 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM CL CHLORIDE ION HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 3 ADP 3(C10 H15 N5 O10 P2) FORMUL 5 PEG 2(C4 H10 O3) FORMUL 6 CL 2(CL 1-) FORMUL 8 AMP C10 H14 N5 O7 P FORMUL 11 HOH *18(H2 O) HELIX 1 AA1 LEU A 3 MET A 8 1 6 HELIX 2 AA2 THR A 20 ARG A 32 1 13 HELIX 3 AA3 SER A 51 ARG A 55 1 5 HELIX 4 AA4 GLU A 66 GLN A 72 1 7 HELIX 5 AA5 PRO A 74 ILE A 78 5 5 HELIX 6 AA6 PHE A 91 ARG A 103 1 13 HELIX 7 AA7 GLN A 121 THR A 132 1 12 HELIX 8 AA8 GLY A 150 GLU A 161 1 12 HELIX 9 AA9 PRO A 191 ALA A 201 1 11 HELIX 10 AB1 LEU B 3 ALA B 7 5 5 HELIX 11 AB2 THR B 20 ARG B 32 1 13 HELIX 12 AB3 SER B 51 ARG B 55 1 5 HELIX 13 AB4 GLU B 69 LYS B 73 5 5 HELIX 14 AB5 PRO B 74 ILE B 78 5 5 HELIX 15 AB6 PHE B 91 ARG B 103 1 13 HELIX 16 AB7 GLN B 121 THR B 132 1 12 HELIX 17 AB8 GLY B 150 GLU B 161 1 12 HELIX 18 AB9 PRO B 191 ALA B 201 1 11 SHEET 1 AA1 3 LEU A 15 ARG A 16 0 SHEET 2 AA1 3 HIS A 35 VAL A 39 1 O VAL A 39 N LEU A 15 SHEET 3 AA1 3 LEU A 45 THR A 50 -1 O GLY A 47 N VAL A 38 SHEET 1 AA2 2 CYS A 106 ASN A 111 0 SHEET 2 AA2 2 LYS A 114 THR A 120 -1 O GLY A 117 N ILE A 109 SHEET 1 AA3 4 ILE A 166 PRO A 173 0 SHEET 2 AA3 4 GLU A 179 VAL A 186 -1 O VAL A 183 N LEU A 170 SHEET 3 AA3 4 SER A 139 PRO A 146 -1 N ILE A 141 O PHE A 184 SHEET 4 AA3 4 HIS A 204 VAL A 205 -1 O HIS A 204 N LYS A 144 SHEET 1 AA4 2 HIS B 35 VAL B 39 0 SHEET 2 AA4 2 LEU B 45 THR B 50 -1 O GLY B 47 N VAL B 38 SHEET 1 AA5 2 CYS B 106 VAL B 110 0 SHEET 2 AA5 2 LEU B 115 THR B 120 -1 O GLY B 117 N ILE B 109 SHEET 1 AA6 4 ILE B 166 PRO B 173 0 SHEET 2 AA6 4 GLU B 179 VAL B 186 -1 O VAL B 183 N LEU B 170 SHEET 3 AA6 4 SER B 139 PRO B 146 -1 N ILE B 141 O PHE B 184 SHEET 4 AA6 4 HIS B 204 VAL B 205 -1 O HIS B 204 N LYS B 144 CISPEP 1 ALA A 10 PRO A 11 0 -0.30 CISPEP 2 ALA B 10 PRO B 11 0 -1.35 CRYST1 52.298 96.668 101.381 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019121 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010345 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009864 0.00000 CONECT 6340 6341 6342 6343 6347 CONECT 6341 6340 CONECT 6342 6340 CONECT 6343 6340 CONECT 6344 6345 6346 6347 6348 CONECT 6345 6344 CONECT 6346 6344 CONECT 6347 6340 6344 CONECT 6348 6344 6349 CONECT 6349 6348 6350 6367 6368 CONECT 6350 6349 6351 6352 6369 CONECT 6351 6350 6356 CONECT 6352 6350 6353 6354 6370 CONECT 6353 6352 6371 CONECT 6354 6352 6355 6356 6372 CONECT 6355 6354 6373 CONECT 6356 6351 6354 6357 6374 CONECT 6357 6356 6358 6366 CONECT 6358 6357 6359 6375 CONECT 6359 6358 6360 CONECT 6360 6359 6361 6366 CONECT 6361 6360 6362 6363 CONECT 6362 6361 6376 6377 CONECT 6363 6361 6364 CONECT 6364 6363 6365 6378 CONECT 6365 6364 6366 CONECT 6366 6357 6360 6365 CONECT 6367 6349 CONECT 6368 6349 CONECT 6369 6350 CONECT 6370 6352 CONECT 6371 6353 CONECT 6372 6354 CONECT 6373 6355 CONECT 6374 6356 CONECT 6375 6358 CONECT 6376 6362 CONECT 6377 6362 CONECT 6378 6364 CONECT 6379 6380 6381 6382 6386 CONECT 6380 6379 CONECT 6381 6379 CONECT 6382 6379 CONECT 6383 6384 6385 6386 6387 CONECT 6384 6383 CONECT 6385 6383 CONECT 6386 6379 6383 CONECT 6387 6383 6388 CONECT 6388 6387 6389 6406 6407 CONECT 6389 6388 6390 6391 6408 CONECT 6390 6389 6395 CONECT 6391 6389 6392 6393 6409 CONECT 6392 6391 6410 CONECT 6393 6391 6394 6395 6411 CONECT 6394 6393 6412 CONECT 6395 6390 6393 6396 6413 CONECT 6396 6395 6397 6405 CONECT 6397 6396 6398 6414 CONECT 6398 6397 6399 CONECT 6399 6398 6400 6405 CONECT 6400 6399 6401 6402 CONECT 6401 6400 6415 6416 CONECT 6402 6400 6403 CONECT 6403 6402 6404 6417 CONECT 6404 6403 6405 CONECT 6405 6396 6399 6404 CONECT 6406 6388 CONECT 6407 6388 CONECT 6408 6389 CONECT 6409 6391 CONECT 6410 6392 CONECT 6411 6393 CONECT 6412 6394 CONECT 6413 6395 CONECT 6414 6397 CONECT 6415 6401 CONECT 6416 6401 CONECT 6417 6403 CONECT 6418 6419 6420 6425 6426 CONECT 6419 6418 6427 CONECT 6420 6418 6421 6428 6429 CONECT 6421 6420 6422 CONECT 6422 6421 6423 6430 6431 CONECT 6423 6422 6424 6432 6433 CONECT 6424 6423 6434 CONECT 6425 6418 CONECT 6426 6418 CONECT 6427 6419 CONECT 6428 6420 CONECT 6429 6420 CONECT 6430 6422 CONECT 6431 6422 CONECT 6432 6423 CONECT 6433 6423 CONECT 6434 6424 CONECT 6436 6437 6438 6439 6443 CONECT 6437 6436 CONECT 6438 6436 CONECT 6439 6436 CONECT 6440 6441 6442 6443 6444 CONECT 6441 6440 CONECT 6442 6440 CONECT 6443 6436 6440 CONECT 6444 6440 6445 CONECT 6445 6444 6446 6463 6464 CONECT 6446 6445 6447 6448 6465 CONECT 6447 6446 6452 CONECT 6448 6446 6449 6450 6466 CONECT 6449 6448 6467 CONECT 6450 6448 6451 6452 6468 CONECT 6451 6450 6469 CONECT 6452 6447 6450 6453 6470 CONECT 6453 6452 6454 6462 CONECT 6454 6453 6455 6471 CONECT 6455 6454 6456 CONECT 6456 6455 6457 6462 CONECT 6457 6456 6458 6459 CONECT 6458 6457 6472 6473 CONECT 6459 6457 6460 CONECT 6460 6459 6461 6474 CONECT 6461 6460 6462 CONECT 6462 6453 6456 6461 CONECT 6463 6445 CONECT 6464 6445 CONECT 6465 6446 CONECT 6466 6448 CONECT 6467 6449 CONECT 6468 6450 CONECT 6469 6451 CONECT 6470 6452 CONECT 6471 6454 CONECT 6472 6458 CONECT 6473 6458 CONECT 6474 6460 CONECT 6475 6476 6477 6478 6479 CONECT 6476 6475 CONECT 6477 6475 CONECT 6478 6475 CONECT 6479 6475 6480 CONECT 6480 6479 6481 6498 6499 CONECT 6481 6480 6482 6483 6500 CONECT 6482 6481 6487 CONECT 6483 6481 6484 6485 6501 CONECT 6484 6483 6502 CONECT 6485 6483 6486 6487 6503 CONECT 6486 6485 6504 CONECT 6487 6482 6485 6488 6505 CONECT 6488 6487 6489 6497 CONECT 6489 6488 6490 6506 CONECT 6490 6489 6491 CONECT 6491 6490 6492 6497 CONECT 6492 6491 6493 6494 CONECT 6493 6492 6507 6508 CONECT 6494 6492 6495 CONECT 6495 6494 6496 6509 CONECT 6496 6495 6497 CONECT 6497 6488 6491 6496 CONECT 6498 6480 CONECT 6499 6480 CONECT 6500 6481 CONECT 6501 6483 CONECT 6502 6484 CONECT 6503 6485 CONECT 6504 6486 CONECT 6505 6487 CONECT 6506 6489 CONECT 6507 6493 CONECT 6508 6493 CONECT 6509 6495 CONECT 6510 6511 6512 6517 6518 CONECT 6511 6510 6519 CONECT 6512 6510 6513 6520 6521 CONECT 6513 6512 6514 CONECT 6514 6513 6515 6522 6523 CONECT 6515 6514 6516 6524 6525 CONECT 6516 6515 6526 CONECT 6517 6510 CONECT 6518 6510 CONECT 6519 6511 CONECT 6520 6512 CONECT 6521 6512 CONECT 6522 6514 CONECT 6523 6514 CONECT 6524 6515 CONECT 6525 6515 CONECT 6526 6516 MASTER 404 0 8 18 17 0 0 6 3237 2 186 36 END