HEADER TRANSFERASE 06-AUG-25 9S9T TITLE STRUCTURE OF HUMAN PKCBETA KINASE DOMAIN WITH RUBOXISTAURIN, D427N TITLE 2 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM BETA-II OF PROTEIN KINASE C BETA TYPE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKC-B,PKC-BETA; COMPND 5 EC: 2.7.11.13; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRKCB, PKCB, PRKCB1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF21 KEYWDS KINASE, INHIBITOR, MUTANT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.C.BRIGGS,P.J.PARKER,N.Q.MCDONALD,S.J.BROWN REVDAT 3 24-DEC-25 9S9T 1 JRNL REVDAT 2 12-NOV-25 9S9T 1 JRNL REVDAT 1 05-NOV-25 9S9T 0 JRNL AUTH S.J.BROWN,D.C.BRIGGS,P.COSTELLO,H.YAGUCHI,C.R.BANGHAM, JRNL AUTH 2 P.J.PARKER,N.Q.MCDONALD JRNL TITL PENETRANT PKC BETA MUTATION IN ATLL DISPLAYS A MIXED JRNL TITL 2 GAIN-OF-FUNCTION. JRNL REF BIOCHEM.J. V. 482 1659 2025 JRNL REFN ESSN 1470-8728 JRNL PMID 41091072 JRNL DOI 10.1042/BCJ20253384 REMARK 2 REMARK 2 RESOLUTION. 3.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 (REFMACAT 0.4.105) REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 7006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.196 REMARK 3 FREE R VALUE TEST SET COUNT : 364 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.43 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 461 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.3940 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.4700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 144.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50700 REMARK 3 B22 (A**2) : -0.50700 REMARK 3 B33 (A**2) : 1.64400 REMARK 3 B12 (A**2) : -0.25300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.628 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.790 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 129.548 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2633 ; 0.009 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2441 ; 0.005 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3563 ; 2.193 ; 1.830 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5649 ; 1.059 ; 1.758 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 313 ; 7.458 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 18 ;23.658 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 449 ;19.657 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 371 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3032 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 600 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 578 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 33 ; 0.100 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1243 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 46 ; 0.101 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1258 ;10.809 ;10.726 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1258 ;10.800 ;10.727 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1569 ;16.524 ;19.396 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1570 ;16.519 ;19.394 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1375 ;12.540 ;11.703 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1376 ;12.535 ;11.703 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1994 ;18.913 ;21.200 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1995 ;18.908 ;21.199 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 340 A 701 REMARK 3 ORIGIN FOR THE GROUP (A): -35.2416 25.8061 7.7793 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.0989 REMARK 3 T33: 0.0376 T12: -0.0765 REMARK 3 T13: 0.0086 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 4.5574 L22: 3.5335 REMARK 3 L33: 3.0690 L12: 1.1298 REMARK 3 L13: 0.3294 L23: -0.8357 REMARK 3 S TENSOR REMARK 3 S11: -0.1811 S12: 0.3310 S13: -0.0884 REMARK 3 S21: -0.4404 S22: 0.2051 S23: 0.1714 REMARK 3 S31: 0.1375 S32: -0.0086 S33: -0.0240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9S9T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1292149979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.17 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.67 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTALS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE CDTE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS 3.10.3-2-G650E29187 REMARK 200 -RELEASE REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7021 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.420 REMARK 200 RESOLUTION RANGE LOW (A) : 60.511 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.47 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP, PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PH 5.17 12.3% PEG 6K, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.60900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.21800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 55.21800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.60900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 321 REMARK 465 THR A 322 REMARK 465 ASN A 323 REMARK 465 THR A 324 REMARK 465 VAL A 325 REMARK 465 SER A 326 REMARK 465 LYS A 327 REMARK 465 PHE A 328 REMARK 465 ASP A 329 REMARK 465 ASN A 330 REMARK 465 ASN A 331 REMARK 465 GLY A 332 REMARK 465 ASN A 333 REMARK 465 ARG A 334 REMARK 465 ASP A 335 REMARK 465 ARG A 336 REMARK 465 MET A 337 REMARK 465 LYS A 338 REMARK 465 LEU A 339 REMARK 465 ALA A 626 REMARK 465 GLU A 627 REMARK 465 ASN A 628 REMARK 465 PHE A 629 REMARK 465 ASP A 630 REMARK 465 ARG A 631 REMARK 465 PHE A 632 REMARK 465 PHE A 633 REMARK 465 THR A 634 REMARK 465 ARG A 635 REMARK 465 HIS A 636 REMARK 465 PRO A 637 REMARK 465 LEU A 667 REMARK 465 LYS A 668 REMARK 465 PRO A 669 REMARK 465 GLU A 670 REMARK 465 VAL A 671 REMARK 465 LYS A 672 REMARK 465 SER A 673 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 365 CG OD1 OD2 REMARK 470 LYS A 499 CG CD CE NZ REMARK 470 LYS A 582 CG CD CE NZ REMARK 470 GLU A 657 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 511 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 MET A 554 CG - SD - CE ANGL. DEV. = 15.7 DEGREES REMARK 500 ARG A 624 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 624 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 362 -55.37 67.01 REMARK 500 GLU A 421 158.71 -50.00 REMARK 500 GLN A 434 -74.11 -88.33 REMARK 500 ARG A 465 -40.40 85.18 REMARK 500 ASP A 466 40.56 -94.42 REMARK 500 ALA A 483 -89.62 -111.78 REMARK 500 TYR A 515 37.37 39.56 REMARK 500 PHE A 600 37.62 -99.84 REMARK 500 ALA A 621 167.00 178.07 REMARK 500 GLU A 665 16.17 -156.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 361 0.14 SIDE CHAIN REMARK 500 ARG A 392 0.08 SIDE CHAIN REMARK 500 ARG A 415 0.13 SIDE CHAIN REMARK 500 ARG A 601 0.07 SIDE CHAIN REMARK 500 ARG A 610 0.10 SIDE CHAIN REMARK 500 ARG A 624 0.26 SIDE CHAIN REMARK 500 ARG A 649 0.21 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9S9T A 322 673 UNP P05771 KPCB_HUMAN 322 673 SEQADV 9S9T GLY A 321 UNP P05771 EXPRESSION TAG SEQADV 9S9T ASN A 427 UNP P05771 ASP 427 ENGINEERED MUTATION SEQRES 1 A 353 GLY THR ASN THR VAL SER LYS PHE ASP ASN ASN GLY ASN SEQRES 2 A 353 ARG ASP ARG MET LYS LEU THR ASP PHE ASN PHE LEU MET SEQRES 3 A 353 VAL LEU GLY LYS GLY SER PHE GLY LYS VAL MET LEU SER SEQRES 4 A 353 GLU ARG LYS GLY THR ASP GLU LEU TYR ALA VAL LYS ILE SEQRES 5 A 353 LEU LYS LYS ASP VAL VAL ILE GLN ASP ASP ASP VAL GLU SEQRES 6 A 353 CYS THR MET VAL GLU LYS ARG VAL LEU ALA LEU PRO GLY SEQRES 7 A 353 LYS PRO PRO PHE LEU THR GLN LEU HIS SER CYS PHE GLN SEQRES 8 A 353 THR MET ASP ARG LEU TYR PHE VAL MET GLU TYR VAL ASN SEQRES 9 A 353 GLY GLY ASN LEU MET TYR HIS ILE GLN GLN VAL GLY ARG SEQRES 10 A 353 PHE LYS GLU PRO HIS ALA VAL PHE TYR ALA ALA GLU ILE SEQRES 11 A 353 ALA ILE GLY LEU PHE PHE LEU GLN SER LYS GLY ILE ILE SEQRES 12 A 353 TYR ARG ASP LEU LYS LEU ASP ASN VAL MET LEU ASP SER SEQRES 13 A 353 GLU GLY HIS ILE LYS ILE ALA ASP PHE GLY MET CYS LYS SEQRES 14 A 353 GLU ASN ILE TRP ASP GLY VAL THR THR LYS TPO PHE CYS SEQRES 15 A 353 GLY THR PRO ASP TYR ILE ALA PRO GLU ILE ILE ALA TYR SEQRES 16 A 353 GLN PRO TYR GLY LYS SER VAL ASP TRP TRP ALA PHE GLY SEQRES 17 A 353 VAL LEU LEU TYR GLU MET LEU ALA GLY GLN ALA PRO PHE SEQRES 18 A 353 GLU GLY GLU ASP GLU ASP GLU LEU PHE GLN SER ILE MET SEQRES 19 A 353 GLU HIS ASN VAL ALA TYR PRO LYS SER MET SER LYS GLU SEQRES 20 A 353 ALA VAL ALA ILE CYS LYS GLY LEU MET THR LYS HIS PRO SEQRES 21 A 353 GLY LYS ARG LEU GLY CYS GLY PRO GLU GLY GLU ARG ASP SEQRES 22 A 353 ILE LYS GLU HIS ALA PHE PHE ARG TYR ILE ASP TRP GLU SEQRES 23 A 353 LYS LEU GLU ARG LYS GLU ILE GLN PRO PRO TYR LYS PRO SEQRES 24 A 353 LYS ALA CYS GLY ARG ASN ALA GLU ASN PHE ASP ARG PHE SEQRES 25 A 353 PHE THR ARG HIS PRO PRO VAL LEU TPO PRO PRO ASP GLN SEQRES 26 A 353 GLU VAL ILE ARG ASN ILE ASP GLN SER GLU PHE GLU GLY SEQRES 27 A 353 PHE SEP PHE VAL ASN SER GLU PHE LEU LYS PRO GLU VAL SEQRES 28 A 353 LYS SER MODRES 9S9T TPO A 500 THR MODIFIED RESIDUE MODRES 9S9T TPO A 641 THR MODIFIED RESIDUE MODRES 9S9T SEP A 660 SER MODIFIED RESIDUE HET TPO A 500 17 HET TPO A 641 17 HET SEP A 660 14 HET LY4 A 701 63 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM LY4 (9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H, HETNAM 2 LY4 18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H][1, HETNAM 3 LY4 4,13]OXADIA ZACYCLOHEXADECINE-18,20-DIONE HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE HETSYN LY4 LY333531 FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 LY4 C28 H28 N4 O3 HELIX 1 AA1 LYS A 375 ASP A 381 1 7 HELIX 2 AA2 GLU A 385 ALA A 395 1 11 HELIX 3 AA3 LEU A 428 VAL A 435 1 8 HELIX 4 AA4 LYS A 439 LYS A 460 1 22 HELIX 5 AA5 LYS A 468 ASP A 470 5 3 HELIX 6 AA6 LYS A 520 GLY A 537 1 18 HELIX 7 AA7 ASP A 545 HIS A 556 1 12 HELIX 8 AA8 SER A 565 MET A 576 1 12 HELIX 9 AA9 GLU A 589 GLU A 596 1 8 HELIX 10 AB1 HIS A 597 ARG A 601 5 5 HELIX 11 AB2 ASP A 604 ARG A 610 1 7 HELIX 12 AB3 ASP A 644 ARG A 649 1 6 SHEET 1 AA1 6 ASN A 343 GLY A 349 0 SHEET 2 AA1 6 LYS A 355 GLU A 360 -1 O VAL A 356 N LEU A 348 SHEET 3 AA1 6 ALA A 369 LYS A 374 -1 O VAL A 370 N MET A 357 SHEET 4 AA1 6 ARG A 415 MET A 420 -1 O LEU A 416 N LEU A 373 SHEET 5 AA1 6 LEU A 406 GLN A 411 -1 N SER A 408 O VAL A 419 SHEET 6 AA1 6 PHE A 661 VAL A 662 -1 O PHE A 661 N CYS A 409 SHEET 1 AA2 3 GLY A 426 ASN A 427 0 SHEET 2 AA2 3 VAL A 472 LEU A 474 -1 O LEU A 474 N GLY A 426 SHEET 3 AA2 3 ILE A 480 ILE A 482 -1 O LYS A 481 N MET A 473 LINK C LYS A 499 N TPO A 500 1555 1555 1.35 LINK C TPO A 500 N PHE A 501 1555 1555 1.34 LINK C LEU A 640 N TPO A 641 1555 1555 1.36 LINK C TPO A 641 N PRO A 642 1555 1555 1.37 LINK C PHE A 659 N SEP A 660 1555 1555 1.35 LINK C SEP A 660 N PHE A 661 1555 1555 1.35 CRYST1 102.327 102.327 82.827 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009773 0.005642 0.000000 0.00000 SCALE2 0.000000 0.011284 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012073 0.00000 CONECT 2525 2530 CONECT 2530 2525 2531 2541 CONECT 2531 2530 2532 2539 2542 CONECT 2532 2531 2533 2534 2543 CONECT 2533 2532 2544 2545 2546 CONECT 2534 2532 2535 CONECT 2535 2534 2536 2537 2538 CONECT 2536 2535 CONECT 2537 2535 CONECT 2538 2535 CONECT 2539 2531 2540 2547 CONECT 2540 2539 CONECT 2541 2530 CONECT 2542 2531 CONECT 2543 2532 CONECT 2544 2533 CONECT 2545 2533 CONECT 2546 2533 CONECT 2547 2539 CONECT 4524 4541 CONECT 4541 4524 4542 4552 CONECT 4542 4541 4543 4550 4553 CONECT 4543 4542 4544 4545 4554 CONECT 4544 4543 4555 4556 4557 CONECT 4545 4543 4546 CONECT 4546 4545 4547 4548 4549 CONECT 4547 4546 CONECT 4548 4546 CONECT 4549 4546 CONECT 4550 4542 4551 4558 CONECT 4551 4550 CONECT 4552 4541 CONECT 4553 4542 CONECT 4554 4543 CONECT 4555 4544 CONECT 4556 4544 CONECT 4557 4544 CONECT 4558 4550 CONECT 4812 4830 CONECT 4830 4812 4831 4840 CONECT 4831 4830 4832 4834 4841 CONECT 4832 4831 4833 4842 4843 CONECT 4833 4832 4836 CONECT 4834 4831 4835 4844 CONECT 4835 4834 CONECT 4836 4833 4837 4838 4839 CONECT 4837 4836 CONECT 4838 4836 CONECT 4839 4836 CONECT 4840 4830 CONECT 4841 4831 CONECT 4842 4832 CONECT 4843 4832 CONECT 4844 4834 CONECT 4940 4941 4970 4975 4976 CONECT 4941 4940 4942 4977 4978 CONECT 4942 4941 4943 4944 CONECT 4943 4942 4950 4979 CONECT 4944 4942 4945 4949 CONECT 4945 4944 4946 4980 CONECT 4946 4945 4947 4981 CONECT 4947 4946 4948 4982 CONECT 4948 4947 4949 4983 CONECT 4949 4944 4948 4950 CONECT 4950 4943 4949 4951 CONECT 4951 4950 4952 4957 CONECT 4952 4951 4953 4954 CONECT 4953 4952 CONECT 4954 4952 4955 4984 CONECT 4955 4954 4956 4957 CONECT 4956 4955 CONECT 4957 4951 4955 4958 CONECT 4958 4957 4959 4960 CONECT 4959 4958 4966 4985 CONECT 4960 4958 4961 4965 CONECT 4961 4960 4962 4986 CONECT 4962 4961 4963 4987 CONECT 4963 4962 4964 4988 CONECT 4964 4963 4965 4989 CONECT 4965 4960 4964 4966 CONECT 4966 4959 4965 4967 CONECT 4967 4966 4968 4990 4991 CONECT 4968 4967 4969 4992 4993 CONECT 4969 4968 4970 CONECT 4970 4940 4969 4971 4994 CONECT 4971 4970 4972 4995 4996 CONECT 4972 4971 4973 4974 CONECT 4973 4972 4997 4998 4999 CONECT 4974 4972 5000 5001 5002 CONECT 4975 4940 CONECT 4976 4940 CONECT 4977 4941 CONECT 4978 4941 CONECT 4979 4943 CONECT 4980 4945 CONECT 4981 4946 CONECT 4982 4947 CONECT 4983 4948 CONECT 4984 4954 CONECT 4985 4959 CONECT 4986 4961 CONECT 4987 4962 CONECT 4988 4963 CONECT 4989 4964 CONECT 4990 4967 CONECT 4991 4967 CONECT 4992 4968 CONECT 4993 4968 CONECT 4994 4970 CONECT 4995 4971 CONECT 4996 4971 CONECT 4997 4973 CONECT 4998 4973 CONECT 4999 4973 CONECT 5000 4974 CONECT 5001 4974 CONECT 5002 4974 MASTER 386 0 4 12 9 0 0 6 2564 1 117 28 END