HEADER TRANSCRIPTION 10-AUG-25 9SCE TITLE STRUCTURE OF S. POMBE PNUTS (565 - 644) BOUND TO SWD2.2 - CRYSTAL FORM TITLE 2 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLEAVAGE AND POLYADENYLATION FACTOR COMPLEX SUBUNIT COMPND 3 C74.02C; COMPND 4 CHAIN: A, C; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: S. POMBE PNUTS (PPN1) RESIDUES 565 - 644 WITH N- COMPND 7 TERMINAL METHIONINE AND C-TERMINAL TEV PROTEASE CLEAVAGE SITE AND COMPND 8 TWIN STREPII TAG. C-TERMINAL TAG WAS CLEAVED BY TEV PROTEASE LEAVING COMPND 9 THE TEV PROTEASE CLEAVAGE SITE EDLYFQ.; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: UNCHARACTERIZED WD REPEAT-CONTAINING PROTEIN C824.04; COMPND 12 CHAIN: D, B; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: SWD2.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 4896; SOURCE 5 GENE: SPCC74.02C; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 10 ORGANISM_COMMON: FISSION YEAST; SOURCE 11 ORGANISM_TAXID: 4896; SOURCE 12 GENE: SPAC824.04; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS TRANSCRIPTION, CLEAVAGE AND POLYADENYLATION, WDR82, PNUTS EXPDTA X-RAY DIFFRACTION AUTHOR H.C.A.AU,E.BALIKCI,K.KUS,J.M.GRIMES,L.VASILJEVA REVDAT 1 05-AUG-26 9SCE 0 JRNL AUTH H.C.A.AU,A.SOUTHERS,K.KUS,E.BALIKCI-AKIL,N.SHOEMAKER, JRNL AUTH 2 M.FOURNIER,E.AYDIN,C.KILCHERT,J.M.GRIMES,L.VASILJEVA JRNL TITL UNDERSTANDING THE ROLE OF THE REGULATED DE-PHOSPHORYLATION JRNL TITL 2 BY PP1 PHOSPHATASE IN PRE-MRNA 3'END FORMATION AND JRNL TITL 3 TERMINATION OF RNA POLYMERASE II TRANSCRIPTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 77.5 REMARK 3 NUMBER OF REFLECTIONS : 92257 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 4636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.9200 - 4.9900 1.00 3877 198 0.1830 0.1975 REMARK 3 2 4.9900 - 3.9600 1.00 3820 182 0.1347 0.1631 REMARK 3 3 3.9600 - 3.4600 1.00 3838 161 0.1521 0.1898 REMARK 3 4 3.4600 - 3.1400 1.00 3769 214 0.1660 0.1983 REMARK 3 5 3.1400 - 2.9200 1.00 3755 224 0.1829 0.1911 REMARK 3 6 2.9200 - 2.7400 1.00 3777 180 0.1702 0.2144 REMARK 3 7 2.7400 - 2.6100 1.00 3791 224 0.1714 0.2009 REMARK 3 8 2.6100 - 2.4900 1.00 3775 204 0.1795 0.2134 REMARK 3 9 2.4900 - 2.4000 1.00 3738 214 0.1775 0.2522 REMARK 3 10 2.4000 - 2.3100 1.00 3787 190 0.1817 0.2265 REMARK 3 11 2.3100 - 2.2400 1.00 3762 182 0.1804 0.2297 REMARK 3 12 2.2400 - 2.1800 1.00 3761 202 0.1872 0.2488 REMARK 3 13 2.1800 - 2.1200 1.00 3740 250 0.1849 0.2405 REMARK 3 14 2.1200 - 2.0700 1.00 3715 219 0.1809 0.1971 REMARK 3 15 2.0700 - 2.0200 1.00 3736 214 0.1933 0.2394 REMARK 3 16 2.0200 - 1.9800 1.00 3801 200 0.2005 0.2370 REMARK 3 17 1.9800 - 1.9400 1.00 3714 206 0.2056 0.2549 REMARK 3 18 1.9400 - 1.9000 0.97 3668 153 0.2161 0.2645 REMARK 3 19 1.9000 - 1.8700 0.92 3515 171 0.2243 0.2706 REMARK 3 20 1.8700 - 1.8400 0.86 3208 171 0.2479 0.2780 REMARK 3 21 1.8400 - 1.8100 0.79 2969 154 0.2452 0.2731 REMARK 3 22 1.8100 - 1.7800 0.70 2624 141 0.2556 0.2920 REMARK 3 23 1.7800 - 1.7500 0.56 2161 95 0.2531 0.2850 REMARK 3 24 1.7500 - 1.7300 0.45 1698 80 0.2678 0.2900 REMARK 3 25 1.7300 - 1.7100 0.37 1386 82 0.2855 0.3016 REMARK 3 26 1.7100 - 1.6800 0.25 933 62 0.2822 0.3070 REMARK 3 27 1.6800 - 1.6600 0.16 611 31 0.2696 0.2659 REMARK 3 28 1.6600 - 1.6400 0.09 347 17 0.2655 0.3253 REMARK 3 29 1.6400 - 1.6200 0.05 208 11 0.2644 0.2924 REMARK 3 30 1.6200 - 1.6100 0.04 137 4 0.2846 0.4450 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.166 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.582 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 7005 REMARK 3 ANGLE : 0.739 9513 REMARK 3 CHIRALITY : 0.051 1039 REMARK 3 PLANARITY : 0.007 1237 REMARK 3 DIHEDRAL : 14.953 2563 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9SCE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1292150112. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92275 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.605 REMARK 200 RESOLUTION RANGE LOW (A) : 81.861 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.95200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% W/V PEG 8000, 20% V/V ETHYLENE REMARK 280 GLYCOL 0.03 M OF EACH ETHYLENE GLYCOL 0.1M MES/IMIDAZOLE PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.64800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR D 340 REMARK 465 SER D 341 REMARK 465 THR B 340 REMARK 465 SER B 341 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 LEU B 339 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ASP D 235 O HOH D 401 1.53 REMARK 500 OD2 ASP D 247 HH21 ARG D 301 1.56 REMARK 500 HD21 ASN B 256 O HOH B 404 1.58 REMARK 500 H1 MET A 1 O HOH A 102 1.59 REMARK 500 O HOH A 197 O HOH B 797 1.87 REMARK 500 O HOH D 405 O HOH D 717 1.88 REMARK 500 O ASP D 240 O HOH D 401 1.92 REMARK 500 O HOH D 739 O HOH D 790 1.92 REMARK 500 O HOH D 402 O HOH D 544 1.93 REMARK 500 O HOH A 209 O HOH A 216 1.93 REMARK 500 O HOH D 534 O HOH D 719 1.94 REMARK 500 O HOH B 478 O HOH B 540 1.94 REMARK 500 O HOH D 408 O HOH D 618 1.95 REMARK 500 O HOH D 704 O HOH D 769 1.96 REMARK 500 O HOH C 205 O HOH C 239 1.97 REMARK 500 O HOH A 176 O HOH B 478 1.97 REMARK 500 O HOH D 470 O HOH D 560 1.98 REMARK 500 O HOH D 625 O HOH D 710 1.98 REMARK 500 O HOH D 764 O HOH D 787 1.98 REMARK 500 O HOH C 188 O HOH C 220 1.98 REMARK 500 O HOH A 208 O HOH B 810 1.98 REMARK 500 O HOH D 692 O HOH B 771 1.98 REMARK 500 O HOH B 659 O HOH B 725 1.98 REMARK 500 O HOH B 492 O HOH B 547 1.99 REMARK 500 O HOH D 492 O HOH D 699 1.99 REMARK 500 O HOH A 129 O HOH A 174 1.99 REMARK 500 O HOH C 208 O HOH C 230 2.00 REMARK 500 O HOH B 653 O HOH B 715 2.00 REMARK 500 O HOH C 102 O HOH C 206 2.00 REMARK 500 O HOH A 101 O HOH A 102 2.00 REMARK 500 O HOH B 606 O HOH B 761 2.00 REMARK 500 O HOH A 193 O HOH A 208 2.00 REMARK 500 O HOH D 721 O HOH D 759 2.01 REMARK 500 OE1 GLU B 250 O HOH B 401 2.01 REMARK 500 O HOH A 233 O HOH B 817 2.01 REMARK 500 O HOH A 198 O HOH A 199 2.01 REMARK 500 O HOH D 795 O HOH D 797 2.01 REMARK 500 OD1 ASN B 256 O HOH B 402 2.01 REMARK 500 O HOH D 644 O HOH D 716 2.01 REMARK 500 O HOH D 749 O HOH D 789 2.01 REMARK 500 O HOH C 176 O HOH C 209 2.01 REMARK 500 O HOH B 645 O HOH B 714 2.01 REMARK 500 O HOH B 731 O HOH B 802 2.02 REMARK 500 O HOH B 806 O HOH B 814 2.03 REMARK 500 O HOH D 408 O HOH D 630 2.03 REMARK 500 O HOH D 485 O HOH B 759 2.03 REMARK 500 O HOH D 570 O HOH D 572 2.03 REMARK 500 O HOH D 683 O HOH D 776 2.04 REMARK 500 O HOH B 524 O HOH B 739 2.04 REMARK 500 O HOH B 597 O HOH B 781 2.04 REMARK 500 REMARK 500 THIS ENTRY HAS 104 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 606 O HOH D 711 1655 1.96 REMARK 500 O HOH A 213 O HOH D 773 1455 2.02 REMARK 500 O HOH A 223 O HOH D 723 2556 2.06 REMARK 500 O HOH A 199 O HOH D 514 2655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 33 110.96 45.29 REMARK 500 SER A 81 144.00 -179.02 REMARK 500 LEU A 84 -31.29 -136.69 REMARK 500 GLU D 68 -54.99 -137.37 REMARK 500 THR D 73 -153.86 -91.26 REMARK 500 SER D 102 -159.94 -164.12 REMARK 500 GLN D 139 -57.85 79.35 REMARK 500 TYR D 182 -51.39 -130.95 REMARK 500 ASN D 229 -46.88 74.16 REMARK 500 ASP D 247 61.12 77.42 REMARK 500 ASN D 269 -39.43 79.04 REMARK 500 ASP D 276 -165.78 -166.41 REMARK 500 ARG D 278 24.29 -147.66 REMARK 500 GLN D 321 137.51 -170.71 REMARK 500 GLU B 68 -51.26 -134.43 REMARK 500 THR B 73 -158.31 -87.63 REMARK 500 SER B 102 -161.75 -164.76 REMARK 500 GLN B 139 -64.58 74.53 REMARK 500 SER B 151 -177.89 -170.25 REMARK 500 TYR B 182 -58.91 -139.89 REMARK 500 ASN B 229 -49.51 76.40 REMARK 500 ASP B 247 63.20 75.95 REMARK 500 ASN B 269 -29.05 75.16 REMARK 500 ASP B 276 -169.49 -162.28 REMARK 500 ARG C 32 72.65 -100.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 286 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 796 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH D 797 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH D 798 DISTANCE = 6.53 ANGSTROMS DBREF 9SCE A 2 81 UNP O74535 CPSFX_SCHPO 565 644 DBREF 9SCE D 1 341 UNP Q9UT39 YIQ4_SCHPO 1 341 DBREF 9SCE B 1 341 UNP Q9UT39 YIQ4_SCHPO 1 341 DBREF 9SCE C 2 81 UNP O74535 CPSFX_SCHPO 565 644 SEQADV 9SCE MET A 1 UNP O74535 INITIATING METHIONINE SEQADV 9SCE GLU A 82 UNP O74535 EXPRESSION TAG SEQADV 9SCE ASP A 83 UNP O74535 EXPRESSION TAG SEQADV 9SCE LEU A 84 UNP O74535 EXPRESSION TAG SEQADV 9SCE TYR A 85 UNP O74535 EXPRESSION TAG SEQADV 9SCE PHE A 86 UNP O74535 EXPRESSION TAG SEQADV 9SCE GLN A 87 UNP O74535 EXPRESSION TAG SEQADV 9SCE MET C 1 UNP O74535 INITIATING METHIONINE SEQADV 9SCE GLU C 82 UNP O74535 EXPRESSION TAG SEQADV 9SCE ASP C 83 UNP O74535 EXPRESSION TAG SEQADV 9SCE LEU C 84 UNP O74535 EXPRESSION TAG SEQADV 9SCE TYR C 85 UNP O74535 EXPRESSION TAG SEQADV 9SCE PHE C 86 UNP O74535 EXPRESSION TAG SEQADV 9SCE GLN C 87 UNP O74535 EXPRESSION TAG SEQRES 1 A 87 MET GLU ILE ILE TRP TYR LYS PRO VAL PRO ILE LYS PHE SEQRES 2 A 87 GLU ILE SER LYS ASP GLU ILE HIS PRO ARG GLY TYR LYS SEQRES 3 A 87 CYS GLY GLY ASN GLU ARG ASN LEU THR PRO GLU ALA THR SEQRES 4 A 87 SER GLU ILE GLU ARG GLU LYS ASN GLU SER LYS ASP ILE SEQRES 5 A 87 SER THR PHE ASN ILE ILE LEU ASP LEU PRO VAL ILE ARG SEQRES 6 A 87 GLU PHE ASP ASP SER ARG PRO PRO ALA HIS ILE LYS LEU SEQRES 7 A 87 VAL SER SER GLU ASP LEU TYR PHE GLN SEQRES 1 D 341 MET ASP ILE GLY ILE LEU SER SER LEU LYS PRO ALA GLN SEQRES 2 D 341 SER PHE ARG ASP ASN SER LEU GLY SER PHE ILE ASN SER SEQRES 3 D 341 ILE ASP TYR SER ASP SER GLY GLU TYR VAL ALA THR THR SEQRES 4 D 341 CYS SER ALA ASP ASP THR VAL GLN ILE TYR ASP ALA LEU SEQRES 5 D 341 ASP PRO LYS GLN VAL HIS THR ILE THR CYS PHE GLU THR SEQRES 6 D 341 GLY ILE GLU VAL ALA ARG PHE THR HIS HIS ASP HIS ASN SEQRES 7 D 341 LEU LEU LEU SER THR THR LYS GLY ASN LYS ASP ILE GLN SEQRES 8 D 341 TYR VAL SER ILE TYR ASP ASN LYS ARG ILE SER TYR PHE SEQRES 9 D 341 SER GLY HIS THR ASP ILE VAL SER SER ILE GLU VAL SER SEQRES 10 D 341 PRO ILE GLU ASP GLN PHE VAL SER THR ALA ASN ASP LYS SEQRES 11 D 341 THR LEU LYS LEU TRP LYS MET ASN GLN SER SER ARG CYS SEQRES 12 D 341 LEU GLY ASN LEU ASP LEU PRO SER LEU GLY ILE PRO ALA SEQRES 13 D 341 TYR ASP PRO THR GLY LEU VAL PHE ALA VAL ALA CYS HIS SEQRES 14 D 341 SER LEU SER ARG ILE PHE LEU TYR ASP VAL ARG ASN TYR SEQRES 15 D 341 GLY SER ASP PRO PHE SER THR PHE THR ILE ASP ASP SER SEQRES 16 D 341 ARG TYR LEU SER ARG PHE SER PHE PRO PRO MET MET PRO SEQRES 17 D 341 GLU TRP LYS HIS MET GLU PHE SER ASN ASP GLY LYS CYS SEQRES 18 D 341 ILE LEU LEU SER THR ARG ALA ASN VAL HIS TYR ILE LEU SEQRES 19 D 341 ASP ALA PHE SER GLY ASP VAL LEU SER ARG LEU GLU ASP SEQRES 20 D 341 PHE GLN GLU LEU PRO PHE SER ASN ASN PHE HIS GLY GLY SEQRES 21 D 341 SER THR THR PHE VAL PRO GLN GLY ASN PHE VAL ILE GLY SEQRES 22 D 341 SER ALA ASP ASP ARG THR LEU ASN VAL TRP ASN LEU ARG SEQRES 23 D 341 HIS THR PHE HIS HIS LYS GLY LYS THR ARG PRO PRO GLU SEQRES 24 D 341 HIS ARG ILE VAL SER GLN SER ILE ILE ASN PRO GLY LEU SEQRES 25 D 341 VAL LYS TYR ASN PRO ARG TYR ASP GLN LEU LEU THR ALA SEQRES 26 D 341 GLY SER GLN LEU VAL PHE TRP LEU PRO GLU LYS TYR ALA SEQRES 27 D 341 LEU THR SER SEQRES 1 B 341 MET ASP ILE GLY ILE LEU SER SER LEU LYS PRO ALA GLN SEQRES 2 B 341 SER PHE ARG ASP ASN SER LEU GLY SER PHE ILE ASN SER SEQRES 3 B 341 ILE ASP TYR SER ASP SER GLY GLU TYR VAL ALA THR THR SEQRES 4 B 341 CYS SER ALA ASP ASP THR VAL GLN ILE TYR ASP ALA LEU SEQRES 5 B 341 ASP PRO LYS GLN VAL HIS THR ILE THR CYS PHE GLU THR SEQRES 6 B 341 GLY ILE GLU VAL ALA ARG PHE THR HIS HIS ASP HIS ASN SEQRES 7 B 341 LEU LEU LEU SER THR THR LYS GLY ASN LYS ASP ILE GLN SEQRES 8 B 341 TYR VAL SER ILE TYR ASP ASN LYS ARG ILE SER TYR PHE SEQRES 9 B 341 SER GLY HIS THR ASP ILE VAL SER SER ILE GLU VAL SER SEQRES 10 B 341 PRO ILE GLU ASP GLN PHE VAL SER THR ALA ASN ASP LYS SEQRES 11 B 341 THR LEU LYS LEU TRP LYS MET ASN GLN SER SER ARG CYS SEQRES 12 B 341 LEU GLY ASN LEU ASP LEU PRO SER LEU GLY ILE PRO ALA SEQRES 13 B 341 TYR ASP PRO THR GLY LEU VAL PHE ALA VAL ALA CYS HIS SEQRES 14 B 341 SER LEU SER ARG ILE PHE LEU TYR ASP VAL ARG ASN TYR SEQRES 15 B 341 GLY SER ASP PRO PHE SER THR PHE THR ILE ASP ASP SER SEQRES 16 B 341 ARG TYR LEU SER ARG PHE SER PHE PRO PRO MET MET PRO SEQRES 17 B 341 GLU TRP LYS HIS MET GLU PHE SER ASN ASP GLY LYS CYS SEQRES 18 B 341 ILE LEU LEU SER THR ARG ALA ASN VAL HIS TYR ILE LEU SEQRES 19 B 341 ASP ALA PHE SER GLY ASP VAL LEU SER ARG LEU GLU ASP SEQRES 20 B 341 PHE GLN GLU LEU PRO PHE SER ASN ASN PHE HIS GLY GLY SEQRES 21 B 341 SER THR THR PHE VAL PRO GLN GLY ASN PHE VAL ILE GLY SEQRES 22 B 341 SER ALA ASP ASP ARG THR LEU ASN VAL TRP ASN LEU ARG SEQRES 23 B 341 HIS THR PHE HIS HIS LYS GLY LYS THR ARG PRO PRO GLU SEQRES 24 B 341 HIS ARG ILE VAL SER GLN SER ILE ILE ASN PRO GLY LEU SEQRES 25 B 341 VAL LYS TYR ASN PRO ARG TYR ASP GLN LEU LEU THR ALA SEQRES 26 B 341 GLY SER GLN LEU VAL PHE TRP LEU PRO GLU LYS TYR ALA SEQRES 27 B 341 LEU THR SER SEQRES 1 C 87 MET GLU ILE ILE TRP TYR LYS PRO VAL PRO ILE LYS PHE SEQRES 2 C 87 GLU ILE SER LYS ASP GLU ILE HIS PRO ARG GLY TYR LYS SEQRES 3 C 87 CYS GLY GLY ASN GLU ARG ASN LEU THR PRO GLU ALA THR SEQRES 4 C 87 SER GLU ILE GLU ARG GLU LYS ASN GLU SER LYS ASP ILE SEQRES 5 C 87 SER THR PHE ASN ILE ILE LEU ASP LEU PRO VAL ILE ARG SEQRES 6 C 87 GLU PHE ASP ASP SER ARG PRO PRO ALA HIS ILE LYS LEU SEQRES 7 C 87 VAL SER SER GLU ASP LEU TYR PHE GLN FORMUL 5 HOH *1098(H2 O) HELIX 1 AA1 GLY A 24 GLY A 28 5 5 HELIX 2 AA2 THR A 35 LYS A 46 1 12 HELIX 3 AA3 ASP D 2 SER D 8 1 7 HELIX 4 AA4 SER D 41 ASP D 43 5 3 HELIX 5 AA5 ASP D 194 SER D 199 1 6 HELIX 6 AA6 PHE D 253 PHE D 257 5 5 HELIX 7 AA7 LYS D 336 ALA D 338 5 3 HELIX 8 AA8 ASP B 2 SER B 8 1 7 HELIX 9 AA9 ASP B 194 SER B 199 1 6 HELIX 10 AB1 PHE B 253 PHE B 257 5 5 HELIX 11 AB2 LYS B 336 ALA B 338 5 3 HELIX 12 AB3 GLY C 24 GLY C 28 5 5 HELIX 13 AB4 THR C 35 LYS C 46 1 12 SHEET 1 AA1 5 PHE A 55 ASN A 56 0 SHEET 2 AA1 5 LYS B 55 THR B 61 1 O THR B 59 N PHE A 55 SHEET 3 AA1 5 THR B 45 ASP B 50 -1 N ILE B 48 O VAL B 57 SHEET 4 AA1 5 TYR B 35 CYS B 40 -1 N VAL B 36 O TYR B 49 SHEET 5 AA1 5 SER B 26 TYR B 29 -1 N ASP B 28 O ALA B 37 SHEET 1 AA2 5 ALA A 74 ILE A 76 0 SHEET 2 AA2 5 ARG B 142 ASP B 148 1 O ASN B 146 N ALA A 74 SHEET 3 AA2 5 THR B 131 LYS B 136 -1 N LEU B 132 O LEU B 147 SHEET 4 AA2 5 GLN B 122 ALA B 127 -1 N PHE B 123 O TRP B 135 SHEET 5 AA2 5 VAL B 111 VAL B 116 -1 N GLU B 115 O VAL B 124 SHEET 1 AA3 4 LEU D 9 PHE D 15 0 SHEET 2 AA3 4 LEU D 329 PRO D 334 -1 O PHE D 331 N GLN D 13 SHEET 3 AA3 4 LEU D 322 ALA D 325 -1 N LEU D 322 O TRP D 332 SHEET 4 AA3 4 LEU D 312 TYR D 315 -1 N LYS D 314 O LEU D 323 SHEET 1 AA4 5 SER D 26 TYR D 29 0 SHEET 2 AA4 5 TYR D 35 CYS D 40 -1 O ALA D 37 N ASP D 28 SHEET 3 AA4 5 THR D 45 ASP D 50 -1 O GLN D 47 N THR D 38 SHEET 4 AA4 5 LYS D 55 THR D 61 -1 O ILE D 60 N VAL D 46 SHEET 5 AA4 5 PHE C 55 ASN C 56 1 O PHE C 55 N THR D 59 SHEET 1 AA5 4 ALA D 70 PHE D 72 0 SHEET 2 AA5 4 ASN D 78 LEU D 81 -1 O LEU D 80 N ARG D 71 SHEET 3 AA5 4 ILE D 90 SER D 94 -1 O GLN D 91 N LEU D 81 SHEET 4 AA5 4 LYS D 99 PHE D 104 -1 O LYS D 99 N SER D 94 SHEET 1 AA6 5 VAL D 111 VAL D 116 0 SHEET 2 AA6 5 GLN D 122 ALA D 127 -1 O VAL D 124 N GLU D 115 SHEET 3 AA6 5 THR D 131 LYS D 136 -1 O TRP D 135 N PHE D 123 SHEET 4 AA6 5 ARG D 142 ASP D 148 -1 O LEU D 147 N LEU D 132 SHEET 5 AA6 5 ALA C 74 ILE C 76 1 O ALA C 74 N ASN D 146 SHEET 1 AA7 4 GLY D 153 TYR D 157 0 SHEET 2 AA7 4 PHE D 164 CYS D 168 -1 O ALA D 165 N ALA D 156 SHEET 3 AA7 4 ARG D 173 TYR D 177 -1 O TYR D 177 N PHE D 164 SHEET 4 AA7 4 SER D 188 THR D 191 -1 O PHE D 190 N ILE D 174 SHEET 1 AA8 5 TRP D 210 PHE D 215 0 SHEET 2 AA8 5 CYS D 221 THR D 226 -1 O LEU D 223 N GLU D 214 SHEET 3 AA8 5 HIS D 231 ASP D 235 -1 O TYR D 232 N LEU D 224 SHEET 4 AA8 5 VAL D 241 LEU D 245 -1 O LEU D 242 N ILE D 233 SHEET 5 AA8 5 LYS D 294 ARG D 296 1 O ARG D 296 N ARG D 244 SHEET 1 AA9 4 THR D 262 PHE D 264 0 SHEET 2 AA9 4 PHE D 270 ASP D 276 -1 O ILE D 272 N THR D 263 SHEET 3 AA9 4 THR D 279 ASN D 284 -1 O TRP D 283 N VAL D 271 SHEET 4 AA9 4 HIS D 300 VAL D 303 -1 O ILE D 302 N LEU D 280 SHEET 1 AB1 4 LEU B 9 PHE B 15 0 SHEET 2 AB1 4 LEU B 329 PRO B 334 -1 O PHE B 331 N GLN B 13 SHEET 3 AB1 4 LEU B 322 ALA B 325 -1 N LEU B 322 O TRP B 332 SHEET 4 AB1 4 LEU B 312 TYR B 315 -1 N LYS B 314 O LEU B 323 SHEET 1 AB2 4 ALA B 70 PHE B 72 0 SHEET 2 AB2 4 ASN B 78 LEU B 81 -1 O LEU B 80 N ARG B 71 SHEET 3 AB2 4 ILE B 90 SER B 94 -1 O GLN B 91 N LEU B 81 SHEET 4 AB2 4 LYS B 99 PHE B 104 -1 O LYS B 99 N SER B 94 SHEET 1 AB3 4 GLY B 153 TYR B 157 0 SHEET 2 AB3 4 PHE B 164 CYS B 168 -1 O ALA B 165 N ALA B 156 SHEET 3 AB3 4 ARG B 173 TYR B 177 -1 O TYR B 177 N PHE B 164 SHEET 4 AB3 4 SER B 188 THR B 191 -1 O PHE B 190 N ILE B 174 SHEET 1 AB4 5 TRP B 210 PHE B 215 0 SHEET 2 AB4 5 CYS B 221 THR B 226 -1 O LEU B 223 N GLU B 214 SHEET 3 AB4 5 HIS B 231 ASP B 235 -1 O LEU B 234 N ILE B 222 SHEET 4 AB4 5 VAL B 241 LEU B 245 -1 O LEU B 242 N ILE B 233 SHEET 5 AB4 5 LYS B 294 ARG B 296 1 O ARG B 296 N ARG B 244 SHEET 1 AB5 4 THR B 262 PHE B 264 0 SHEET 2 AB5 4 PHE B 270 ASP B 276 -1 O ILE B 272 N THR B 263 SHEET 3 AB5 4 THR B 279 ASN B 284 -1 O TRP B 283 N VAL B 271 SHEET 4 AB5 4 HIS B 300 VAL B 303 -1 O ILE B 302 N LEU B 280 CISPEP 1 PHE D 203 PRO D 204 0 -1.44 CISPEP 2 PHE B 203 PRO B 204 0 -1.07 CRYST1 60.770 93.296 81.871 90.00 90.90 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016455 0.000000 0.000257 0.00000 SCALE2 0.000000 0.010719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012216 0.00000 MASTER 402 0 0 13 62 0 0 6 7925 4 0 68 END