HEADER HYDROLASE 01-SEP-25 9SK0 TITLE URETHANASE 15 IN COMPLEX WITH ETHYLENE GLYCOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: URETHANASE 15; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPHINGOMONAS SP. R647; SOURCE 3 ORGANISM_TAXID: 2875233; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS HYDROLASE, AMIDASE, POLYURETHANE DEGRADATION EXPDTA X-RAY DIFFRACTION AUTHOR L.ROTILIO,J.P.MORTH REVDAT 1 05-AUG-26 9SK0 0 JRNL AUTH L.ROTILIO,J.P.MORTH JRNL TITL URETHANASE 15 IN COMPLEX WITH ETHYLENE GLYCOL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.2_5419: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 53788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 2615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4500 - 5.4700 1.00 3004 144 0.1542 0.1842 REMARK 3 2 5.4700 - 4.3500 1.00 2880 145 0.1399 0.1891 REMARK 3 3 4.3400 - 3.8000 0.95 2675 141 0.1525 0.2115 REMARK 3 4 3.8000 - 3.4500 0.97 2740 147 0.1729 0.2291 REMARK 3 5 3.4500 - 3.2000 0.95 2658 145 0.1903 0.2312 REMARK 3 6 3.2000 - 3.0100 1.00 2791 165 0.2071 0.2527 REMARK 3 7 3.0100 - 2.8600 1.00 2798 125 0.1905 0.2981 REMARK 3 8 2.8600 - 2.7400 1.00 2759 145 0.1950 0.2370 REMARK 3 9 2.7400 - 2.6300 0.84 2356 104 0.2024 0.3157 REMARK 3 10 2.6300 - 2.5400 1.00 2791 130 0.1938 0.2701 REMARK 3 11 2.5400 - 2.4600 1.00 2762 128 0.2013 0.2637 REMARK 3 12 2.4600 - 2.3900 1.00 2784 142 0.1908 0.3040 REMARK 3 13 2.3900 - 2.3300 1.00 2777 136 0.1815 0.2218 REMARK 3 14 2.3300 - 2.2700 1.00 2750 151 0.1951 0.2381 REMARK 3 15 2.2700 - 2.2200 0.87 2393 132 0.2231 0.3080 REMARK 3 16 2.2200 - 2.1700 1.00 2747 153 0.2240 0.2996 REMARK 3 17 2.1700 - 2.1300 0.99 2730 146 0.2445 0.2599 REMARK 3 18 2.1300 - 2.0900 0.96 2647 130 0.2713 0.3051 REMARK 3 19 2.0900 - 2.0500 0.77 2131 106 0.3150 0.3522 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6550 REMARK 3 ANGLE : 0.836 8966 REMARK 3 CHIRALITY : 0.050 1047 REMARK 3 PLANARITY : 0.009 1196 REMARK 3 DIHEDRAL : 14.347 2309 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0296 14.4507 15.9668 REMARK 3 T TENSOR REMARK 3 T11: 0.4385 T22: 0.5415 REMARK 3 T33: 0.3797 T12: 0.0794 REMARK 3 T13: 0.0200 T23: 0.1424 REMARK 3 L TENSOR REMARK 3 L11: 0.0374 L22: 0.0794 REMARK 3 L33: 0.0818 L12: 0.0338 REMARK 3 L13: -0.0603 L23: -0.0397 REMARK 3 S TENSOR REMARK 3 S11: 0.1469 S12: -0.1482 S13: -0.2261 REMARK 3 S21: 0.1987 S22: -0.1779 S23: 0.1038 REMARK 3 S31: 0.3810 S32: 0.1581 S33: -0.0009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5529 26.6250 -2.6917 REMARK 3 T TENSOR REMARK 3 T11: 0.2969 T22: 0.3212 REMARK 3 T33: 0.3719 T12: 0.0359 REMARK 3 T13: 0.0047 T23: 0.0267 REMARK 3 L TENSOR REMARK 3 L11: 0.8106 L22: 0.5319 REMARK 3 L33: 1.4584 L12: 0.1788 REMARK 3 L13: -0.1539 L23: -0.4055 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: -0.1219 S13: -0.0426 REMARK 3 S21: -0.0345 S22: 0.0737 S23: 0.1128 REMARK 3 S31: 0.1999 S32: -0.0206 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 401 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4029 37.7696 5.8049 REMARK 3 T TENSOR REMARK 3 T11: 0.3016 T22: 0.3829 REMARK 3 T33: 0.3494 T12: 0.0564 REMARK 3 T13: 0.0078 T23: -0.0361 REMARK 3 L TENSOR REMARK 3 L11: 0.0938 L22: 0.0931 REMARK 3 L33: 0.0931 L12: -0.0778 REMARK 3 L13: 0.0977 L23: -0.0573 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: -0.2565 S13: -0.0722 REMARK 3 S21: 0.0666 S22: 0.1272 S23: 0.0419 REMARK 3 S31: 0.0884 S32: 0.1859 S33: 0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.1746 39.9415 -37.0157 REMARK 3 T TENSOR REMARK 3 T11: 0.4628 T22: 0.6048 REMARK 3 T33: 0.3662 T12: -0.0140 REMARK 3 T13: 0.0772 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 0.0677 L22: 0.0914 REMARK 3 L33: 0.0772 L12: -0.0230 REMARK 3 L13: -0.0308 L23: -0.0680 REMARK 3 S TENSOR REMARK 3 S11: -0.0750 S12: 0.3542 S13: -0.1385 REMARK 3 S21: -0.2627 S22: 0.1398 S23: -0.2030 REMARK 3 S31: 0.0937 S32: 0.3478 S33: -0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3602 35.9194 -36.6023 REMARK 3 T TENSOR REMARK 3 T11: 0.4630 T22: 0.4859 REMARK 3 T33: 0.3314 T12: -0.0222 REMARK 3 T13: 0.0013 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 0.9487 L22: 0.3058 REMARK 3 L33: 0.6066 L12: -0.1945 REMARK 3 L13: -0.3822 L23: -0.2756 REMARK 3 S TENSOR REMARK 3 S11: -0.1040 S12: 0.4170 S13: -0.0078 REMARK 3 S21: -0.2178 S22: 0.1228 S23: -0.0022 REMARK 3 S31: 0.0251 S32: 0.0139 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 216 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9859 13.5065 -29.9858 REMARK 3 T TENSOR REMARK 3 T11: 0.5785 T22: 0.3732 REMARK 3 T33: 0.5221 T12: 0.1012 REMARK 3 T13: 0.1250 T23: -0.0887 REMARK 3 L TENSOR REMARK 3 L11: 0.3411 L22: 0.1782 REMARK 3 L33: 0.3071 L12: 0.0756 REMARK 3 L13: -0.0986 L23: -0.2319 REMARK 3 S TENSOR REMARK 3 S11: -0.2094 S12: 0.0953 S13: -0.3586 REMARK 3 S21: -0.0829 S22: 0.0966 S23: -0.2164 REMARK 3 S31: 0.3851 S32: 0.2477 S33: -0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 292 THROUGH 419 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3844 16.8393 -36.8777 REMARK 3 T TENSOR REMARK 3 T11: 0.6016 T22: 0.5119 REMARK 3 T33: 0.4248 T12: -0.0775 REMARK 3 T13: 0.0667 T23: -0.1226 REMARK 3 L TENSOR REMARK 3 L11: 0.4278 L22: 0.2417 REMARK 3 L33: 0.3210 L12: 0.2151 REMARK 3 L13: -0.3437 L23: -0.0350 REMARK 3 S TENSOR REMARK 3 S11: -0.2373 S12: 0.4104 S13: -0.3349 REMARK 3 S21: -0.2273 S22: 0.1609 S23: -0.0631 REMARK 3 S31: 0.3152 S32: -0.1118 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 420 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7611 15.3236 -30.3911 REMARK 3 T TENSOR REMARK 3 T11: 0.5080 T22: 0.4770 REMARK 3 T33: 0.6478 T12: 0.1241 REMARK 3 T13: 0.1230 T23: -0.1088 REMARK 3 L TENSOR REMARK 3 L11: 0.0147 L22: 0.0223 REMARK 3 L33: 0.0240 L12: -0.0121 REMARK 3 L13: -0.0001 L23: -0.0202 REMARK 3 S TENSOR REMARK 3 S11: -0.0700 S12: 0.1790 S13: -0.0916 REMARK 3 S21: -0.0341 S22: -0.0075 S23: -0.3374 REMARK 3 S31: 0.0655 S32: 0.2044 S33: -0.0005 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9SK0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1292150585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0596 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 604128 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 46.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE 0.05 M REMARK 280 MAGNESIUM SULFATE HEPTAHYDRATE 0.1 M BICINE 9.0 20 % V/V PEG REMARK 280 SMEAR MEDIUM, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 47.97800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.07700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.97800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.07700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 851 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 82 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 145 98.26 -170.30 REMARK 500 SER A 154 48.74 -82.84 REMARK 500 ILE A 174 -34.42 -131.62 REMARK 500 ASP A 208 90.19 -164.81 REMARK 500 LEU A 214 -43.34 72.09 REMARK 500 ALA A 243 -88.43 -81.73 REMARK 500 HIS A 419 39.95 -95.33 REMARK 500 ALA B 126 14.48 57.64 REMARK 500 ASP B 145 103.81 -166.92 REMARK 500 SER B 154 40.72 -80.96 REMARK 500 ASP B 208 88.63 -164.59 REMARK 500 LEU B 214 -47.05 76.46 REMARK 500 ASP B 291 93.62 -69.36 REMARK 500 ASP B 380 30.04 -82.66 REMARK 500 HIS B 419 41.93 -102.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 179 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 723 DISTANCE = 5.90 ANGSTROMS DBREF 9SK0 A 1 439 PDB 9SK0 9SK0 1 439 DBREF 9SK0 B 1 439 PDB 9SK0 9SK0 1 439 SEQRES 1 A 439 MET THR LEU VAL ARG ALA SER ALA ILE ASP ILE ALA THR SEQRES 2 A 439 ALA ILE ALA ALA GLY GLU THR SER ALA ARG GLU GLN CYS SEQRES 3 A 439 GLU ALA ALA ILE ALA ARG ILE GLU ALA GLY ASP GLY ALA SEQRES 4 A 439 ILE ASN ALA VAL VAL VAL ARG ASP PHE GLU ARG ALA LEU SEQRES 5 A 439 LYS ALA ALA ASP GLU ALA ASP ALA ALA VAL ALA ARG GLY SEQRES 6 A 439 GLU ARG ARG PRO LEU LEU GLY VAL PRO MET THR VAL LYS SEQRES 7 A 439 GLU ALA PHE ASP VAL ALA GLY LEU PRO THR SER TRP GLY SEQRES 8 A 439 PHE SER HIS ALA ALA GLY ASN ILE ALA THR SER ASP ALA SEQRES 9 A 439 VAL ALA VAL GLN ARG LEU LYS ALA ALA GLY ALA ILE ILE SEQRES 10 A 439 LEU GLY LYS THR ASN VAL PRO LYS ALA LEU GLY ASP TRP SEQRES 11 A 439 GLN SER VAL ASN SER VAL TYR GLY ARG THR SER ASN PRO SEQRES 12 A 439 HIS ASP PRO THR ARG THR CYS GLY GLY SER SER GLY GLY SEQRES 13 A 439 ALA ALA ALA ALA LEU ALA ALA GLY TYR VAL PRO ILE GLU SEQRES 14 A 439 LEU GLY SER ASP ILE GLY GLY SER ILE ARG VAL PRO SER SEQRES 15 A 439 HIS PHE CYS GLY ILE TRP GLY HIS LYS PRO SER PHE GLY SEQRES 16 A 439 ALA LEU ASN GLY HIS GLY HIS ARG PHE PRO GLY THR ASP SEQRES 17 A 439 GLY ALA GLU THR VAL LEU SER VAL ILE GLY PRO MET ALA SEQRES 18 A 439 ARG HIS GLY SER ASP LEU PRO LEU LEU LEU ASP LEU LEU SEQRES 19 A 439 ALA ASP LEU PRO LEU PRO ARG ASP ALA ALA PRO ALA ARG SEQRES 20 A 439 ARG VAL LEU VAL LEU THR ALA HIS PRO ALA THR ALA THR SEQRES 21 A 439 ALA SER ALA VAL ILE ASP GLY VAL GLU ARG ALA ALA ASP SEQRES 22 A 439 ALA LEU ALA ARG ASP GLY VAL GLU VAL ILE ARG THR HIS SEQRES 23 A 439 PRO ALA LEU PRO ASP LEU SER ALA GLN HIS ASP GLY TYR SEQRES 24 A 439 THR ALA LEU LEU GLY THR VAL PHE ALA ARG SER ASP PRO SEQRES 25 A 439 THR LEU HIS ASP THR LEU PRO ARG LEU LEU PRO TYR LEU SEQRES 26 A 439 SER MET LEU ASP ALA GLN ALA ARG ASN THR ARG ALA TRP SEQRES 27 A 439 ALA ALA LEU PHE ALA ASP VAL ASP ALA VAL ILE ALA PRO SEQRES 28 A 439 PRO ALA ALA THR GLN ALA PHE PRO HIS ASP PRO ARG PRO SEQRES 29 A 439 GLN ALA GLU ARG THR LEU ASP ILE ASP GLY VAL GLU SER SEQRES 30 A 439 GLY TYR ASP ALA HIS LEU ALA TRP ALA GLY LEU ALA THR SEQRES 31 A 439 TYR PRO GLY LEU PRO ALA THR THR PHE PRO VAL GLY THR SEQRES 32 A 439 THR ASN ALA LEU PRO THR GLY VAL GLN VAL LEU THR ASN SEQRES 33 A 439 LEU HIS HIS ASP HIS LEU ALA ILE ALA THR ALA ARG ARG SEQRES 34 A 439 ILE ALA ALA LEU LEU ASP GLU GLU LYS GLN SEQRES 1 B 439 MET THR LEU VAL ARG ALA SER ALA ILE ASP ILE ALA THR SEQRES 2 B 439 ALA ILE ALA ALA GLY GLU THR SER ALA ARG GLU GLN CYS SEQRES 3 B 439 GLU ALA ALA ILE ALA ARG ILE GLU ALA GLY ASP GLY ALA SEQRES 4 B 439 ILE ASN ALA VAL VAL VAL ARG ASP PHE GLU ARG ALA LEU SEQRES 5 B 439 LYS ALA ALA ASP GLU ALA ASP ALA ALA VAL ALA ARG GLY SEQRES 6 B 439 GLU ARG ARG PRO LEU LEU GLY VAL PRO MET THR VAL LYS SEQRES 7 B 439 GLU ALA PHE ASP VAL ALA GLY LEU PRO THR SER TRP GLY SEQRES 8 B 439 PHE SER HIS ALA ALA GLY ASN ILE ALA THR SER ASP ALA SEQRES 9 B 439 VAL ALA VAL GLN ARG LEU LYS ALA ALA GLY ALA ILE ILE SEQRES 10 B 439 LEU GLY LYS THR ASN VAL PRO LYS ALA LEU GLY ASP TRP SEQRES 11 B 439 GLN SER VAL ASN SER VAL TYR GLY ARG THR SER ASN PRO SEQRES 12 B 439 HIS ASP PRO THR ARG THR CYS GLY GLY SER SER GLY GLY SEQRES 13 B 439 ALA ALA ALA ALA LEU ALA ALA GLY TYR VAL PRO ILE GLU SEQRES 14 B 439 LEU GLY SER ASP ILE GLY GLY SER ILE ARG VAL PRO SER SEQRES 15 B 439 HIS PHE CYS GLY ILE TRP GLY HIS LYS PRO SER PHE GLY SEQRES 16 B 439 ALA LEU ASN GLY HIS GLY HIS ARG PHE PRO GLY THR ASP SEQRES 17 B 439 GLY ALA GLU THR VAL LEU SER VAL ILE GLY PRO MET ALA SEQRES 18 B 439 ARG HIS GLY SER ASP LEU PRO LEU LEU LEU ASP LEU LEU SEQRES 19 B 439 ALA ASP LEU PRO LEU PRO ARG ASP ALA ALA PRO ALA ARG SEQRES 20 B 439 ARG VAL LEU VAL LEU THR ALA HIS PRO ALA THR ALA THR SEQRES 21 B 439 ALA SER ALA VAL ILE ASP GLY VAL GLU ARG ALA ALA ASP SEQRES 22 B 439 ALA LEU ALA ARG ASP GLY VAL GLU VAL ILE ARG THR HIS SEQRES 23 B 439 PRO ALA LEU PRO ASP LEU SER ALA GLN HIS ASP GLY TYR SEQRES 24 B 439 THR ALA LEU LEU GLY THR VAL PHE ALA ARG SER ASP PRO SEQRES 25 B 439 THR LEU HIS ASP THR LEU PRO ARG LEU LEU PRO TYR LEU SEQRES 26 B 439 SER MET LEU ASP ALA GLN ALA ARG ASN THR ARG ALA TRP SEQRES 27 B 439 ALA ALA LEU PHE ALA ASP VAL ASP ALA VAL ILE ALA PRO SEQRES 28 B 439 PRO ALA ALA THR GLN ALA PHE PRO HIS ASP PRO ARG PRO SEQRES 29 B 439 GLN ALA GLU ARG THR LEU ASP ILE ASP GLY VAL GLU SER SEQRES 30 B 439 GLY TYR ASP ALA HIS LEU ALA TRP ALA GLY LEU ALA THR SEQRES 31 B 439 TYR PRO GLY LEU PRO ALA THR THR PHE PRO VAL GLY THR SEQRES 32 B 439 THR ASN ALA LEU PRO THR GLY VAL GLN VAL LEU THR ASN SEQRES 33 B 439 LEU HIS HIS ASP HIS LEU ALA ILE ALA THR ALA ARG ARG SEQRES 34 B 439 ILE ALA ALA LEU LEU ASP GLU GLU LYS GLN HET EDO A 501 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *515(H2 O) HELIX 1 AA1 SER A 7 ALA A 17 1 11 HELIX 2 AA2 SER A 21 ASN A 41 1 21 HELIX 3 AA3 ASP A 47 ARG A 64 1 18 HELIX 4 AA4 PHE A 92 ALA A 96 5 5 HELIX 5 AA5 ALA A 104 ALA A 113 1 10 HELIX 6 AA6 PRO A 124 GLY A 128 5 5 HELIX 7 AA7 SER A 154 ALA A 163 1 10 HELIX 8 AA8 ILE A 178 GLY A 186 1 9 HELIX 9 AA9 HIS A 223 SER A 225 5 3 HELIX 10 AB1 ASP A 226 ALA A 235 1 10 HELIX 11 AB2 ALA A 261 ASP A 278 1 18 HELIX 12 AB3 ASP A 291 ASP A 311 1 21 HELIX 13 AB4 PRO A 312 LEU A 318 5 7 HELIX 14 AB5 ARG A 320 ALA A 343 1 24 HELIX 15 AB6 PRO A 364 GLU A 367 5 4 HELIX 16 AB7 ALA A 381 TYR A 391 1 11 HELIX 17 AB8 HIS A 419 GLU A 436 1 18 HELIX 18 AB9 GLU A 437 GLN A 439 5 3 HELIX 19 AC1 SER B 7 ALA B 17 1 11 HELIX 20 AC2 SER B 21 ASN B 41 1 21 HELIX 21 AC3 ASP B 47 ARG B 64 1 18 HELIX 22 AC4 PHE B 92 ALA B 96 5 5 HELIX 23 AC5 ALA B 104 ALA B 113 1 10 HELIX 24 AC6 PRO B 124 GLY B 128 5 5 HELIX 25 AC7 SER B 154 ALA B 163 1 10 HELIX 26 AC8 ILE B 178 GLY B 186 1 9 HELIX 27 AC9 HIS B 223 SER B 225 5 3 HELIX 28 AD1 ASP B 226 ALA B 235 1 10 HELIX 29 AD2 ALA B 261 ASP B 278 1 18 HELIX 30 AD3 ASP B 291 ASP B 311 1 21 HELIX 31 AD4 PRO B 312 LEU B 318 5 7 HELIX 32 AD5 ARG B 320 ALA B 343 1 24 HELIX 33 AD6 PRO B 364 GLU B 367 5 4 HELIX 34 AD7 HIS B 382 TYR B 391 1 10 HELIX 35 AD8 HIS B 419 ASP B 435 1 17 SHEET 1 AA1 3 VAL A 43 ARG A 46 0 SHEET 2 AA1 3 ILE A 116 THR A 121 -1 O LYS A 120 N VAL A 45 SHEET 3 AA1 3 PRO A 74 LYS A 78 1 N MET A 75 O LEU A 118 SHEET 1 AA2 2 VAL A 133 ASN A 134 0 SHEET 2 AA2 2 GLY A 138 ARG A 139 -1 O GLY A 138 N ASN A 134 SHEET 1 AA3 2 SER A 141 ASN A 142 0 SHEET 2 AA3 2 ASP A 145 THR A 149 -1 O ARG A 148 N ASN A 142 SHEET 1 AA4 8 ILE A 168 ASP A 173 0 SHEET 2 AA4 8 VAL A 216 ALA A 221 -1 O GLY A 218 N GLY A 171 SHEET 3 AA4 8 TRP A 188 LYS A 191 -1 N HIS A 190 O PRO A 219 SHEET 4 AA4 8 ALA A 396 THR A 404 -1 O ALA A 396 N LYS A 191 SHEET 5 AA4 8 LEU A 407 LEU A 414 -1 O THR A 409 N VAL A 401 SHEET 6 AA4 8 ALA A 347 ALA A 350 -1 N VAL A 348 O LEU A 414 SHEET 7 AA4 8 ARG A 248 VAL A 251 1 N LEU A 250 O ILE A 349 SHEET 8 AA4 8 GLU A 281 ILE A 283 1 O ILE A 283 N VAL A 251 SHEET 1 AA5 2 THR A 369 ILE A 372 0 SHEET 2 AA5 2 VAL A 375 GLY A 378 -1 O SER A 377 N LEU A 370 SHEET 1 AA6 3 VAL B 43 ARG B 46 0 SHEET 2 AA6 3 ILE B 116 THR B 121 -1 O LYS B 120 N VAL B 45 SHEET 3 AA6 3 PRO B 74 LYS B 78 1 N MET B 75 O LEU B 118 SHEET 1 AA7 2 VAL B 133 ASN B 134 0 SHEET 2 AA7 2 GLY B 138 ARG B 139 -1 O GLY B 138 N ASN B 134 SHEET 1 AA8 2 SER B 141 ASN B 142 0 SHEET 2 AA8 2 ASP B 145 THR B 149 -1 O ARG B 148 N ASN B 142 SHEET 1 AA9 8 ILE B 168 ASP B 173 0 SHEET 2 AA9 8 VAL B 216 ALA B 221 -1 O GLY B 218 N GLY B 171 SHEET 3 AA9 8 TRP B 188 LYS B 191 -1 N TRP B 188 O ALA B 221 SHEET 4 AA9 8 ALA B 396 THR B 404 -1 O ALA B 396 N LYS B 191 SHEET 5 AA9 8 LEU B 407 LEU B 414 -1 O LEU B 407 N THR B 404 SHEET 6 AA9 8 ALA B 347 ALA B 350 -1 N VAL B 348 O LEU B 414 SHEET 7 AA9 8 ARG B 248 VAL B 251 1 N LEU B 250 O ILE B 349 SHEET 8 AA9 8 GLU B 281 ILE B 283 1 O ILE B 283 N VAL B 249 SHEET 1 AB1 2 THR B 369 ILE B 372 0 SHEET 2 AB1 2 VAL B 375 GLY B 378 -1 O SER B 377 N LEU B 370 CISPEP 1 GLY A 152 SER A 153 0 6.83 CISPEP 2 GLY B 152 SER B 153 0 2.86 CRYST1 95.956 106.154 86.286 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010421 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011589 0.00000 CONECT 6408 6409 6410 6412 6413 CONECT 6409 6408 6414 CONECT 6410 6408 6411 6415 6416 CONECT 6411 6410 6417 CONECT 6412 6408 CONECT 6413 6408 CONECT 6414 6409 CONECT 6415 6410 CONECT 6416 6410 CONECT 6417 6411 MASTER 423 0 1 35 34 0 0 6 6924 2 10 68 END